mRNA_F-serratus_M_contig73.18524.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig73.18524.1 vs. uniprot
Match: D7G111_ECTSI (Glycine/D-amino acid oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G111_ECTSI) HSP 1 Score: 248 bits (633), Expect = 7.270e-80 Identity = 118/140 (84.29%), Postives = 130/140 (92.86%), Query Frame = 2
Query: 2 LLRADTGWTALRNMKTGGDAGPTPSFVMEDDTPLGDENPPAFDVIVCGGTLGIFMATALQIKGFKVGVVERGPLRGREQEWNISEAELEEMVEVGVLSEQDAEDCISVRFNPLRAGFKRAEGHPDAVDTFCPDVLNTGVK 421
LLRAD GWTALRNMKTG DAGP P++V E DTPLG ENPPAFDV+VCGGTLGIF+ATALQ++GF+VGVVERGPL GREQEWNISEAELEEMVE VLS++DAE+C+S+RFNPLRAGFKRAEG PDAVDTFCPDVLNTGVK
Sbjct: 22 LLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFVATALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDPDAVDTFCPDVLNTGVK 161
BLAST of mRNA_F-serratus_M_contig73.18524.1 vs. uniprot
Match: A0A6H5L433_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L433_9PHAE) HSP 1 Score: 245 bits (626), Expect = 3.210e-75 Identity = 117/140 (83.57%), Postives = 129/140 (92.14%), Query Frame = 2
Query: 2 LLRADTGWTALRNMKTGGDAGPTPSFVMEDDTPLGDENPPAFDVIVCGGTLGIFMATALQIKGFKVGVVERGPLRGREQEWNISEAELEEMVEVGVLSEQDAEDCISVRFNPLRAGFKRAEGHPDAVDTFCPDVLNTGVK 421
LLRAD GWTALRNMKTG DAGP P++V E DTPLG ENPPAFDV+VCGGTLGIF+ATALQ++GF+VGVVERGPL GREQEWNISEAELEEMVE VLS++DAE+C+S+RFNPLRAGFKRAEG P AVDTFCPDVLNTGVK
Sbjct: 120 LLRADAGWTALRNMKTGDDAGPAPTYVTESDTPLGAENPPAFDVVVCGGTLGIFVATALQMRGFRVGVVERGPLLGREQEWNISEAELEEMVEAEVLSKEDAEECVSIRFNPLRAGFKRAEGDPGAVDTFCPDVLNTGVK 259
BLAST of mRNA_F-serratus_M_contig73.18524.1 vs. uniprot
Match: A0A7S4DCS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCS5_HETAK) HSP 1 Score: 154 bits (389), Expect = 2.870e-41 Identity = 78/139 (56.12%), Postives = 92/139 (66.19%), Query Frame = 2
Query: 2 LLRADTGWTALRNMKTGGDAGPTPSFVMEDDTPLGDENPPAFDVIVCGGTLGIFMATALQIKGFKVGVVERGPLRGREQEWNISEAELEEMVEVGVLSEQDAEDCISVRFNPLRAGFKRAEGHPDAVDTFCPDVLNTGV 418
LLR D W A+RNMK G AGP P FV E P +DV+V GGTLG+F A ALQ+ G KV VVERGPLRGR Q+WNI+ EL +V GVLSE++AE IS+ FNP+RAGFK E PD + + DVLN GV
Sbjct: 22 LLRMDATWKAIRNMKEGAAAGPAPVFVRERRGEAWGGGPTEYDVVVAGGTLGVFQACALQLAGLKVAVVERGPLRGRNQDWNIARKELWGLVRAGVLSEEEAEAAISIEFNPMRAGFKLGEDDPDGFEVYMDDVLNLGV 160
BLAST of mRNA_F-serratus_M_contig73.18524.1 vs. uniprot
Match: A0A7S1J7L3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J7L3_9EUGL) HSP 1 Score: 146 bits (368), Expect = 1.620e-39 Identity = 75/139 (53.96%), Postives = 99/139 (71.22%), Query Frame = 2
Query: 2 LLRADTGWTALRNMKTGGDAGPTPSFVMEDDTPLGDENPPAFDVIVCGGTLGIFMATALQIKGFKVGVVERGPLRGREQEWNISEAELEEMVEVGVLSEQDAEDCISVRFNPLRAGFKRAEGHPDAVDTFCPDVLNTGV 418
L RAD W LR MKTG DAGP P FV E PLG PP +DV+VCGGTLGIF+A LQ +G +V VVE+G LRGREQ+WN+S +E++E+VE+G +++++AE+CI+ FNP+R GF G P+ + +VLN GV
Sbjct: 156 LKRADGVWKGLREMKTGADAGPAPEFVKEATDPLGV--PPTYDVVVCGGTLGIFVACVLQKRGLRVAVVEQGILRGREQDWNVSRSEMQELVELGAITQEEAEECIANEFNPMRCGFG---GGPEVL---VENVLNIGV 286
BLAST of mRNA_F-serratus_M_contig73.18524.1 vs. uniprot
Match: A0A8J9RAY4_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RAY4_9CHLO) HSP 1 Score: 145 bits (365), Expect = 9.840e-38 Identity = 78/140 (55.71%), Postives = 95/140 (67.86%), Query Frame = 2
Query: 2 LLRADTGWTALRNMKTGGDAGPTPSFVMEDDTPLGDENPPAFDVIVCGGTLGIFMATALQIKGFKVGVVERGPLRGREQEWNISEAELEEMVEVGVLSEQDAEDCISVRFNPLRAGFKRAEGHPDAVDTFCPDVLNTGVK 421
L +AD W LR + G P P FV D PL + PP FDV++CGGTLGIF+A ALQ+ G +V VVERGPLRGREQEWNIS EL E+VE G++S ++AE+CISV FNP+RAGF E D + DVLN GV+
Sbjct: 87 LRKADEAWKRLRTAQMNG---PAPEFVRTVDQPL--QAPPHFDVVMCGGTLGIFLACALQLSGLRVAVVERGPLRGREQEWNISRKELMELVEEGLVSGEEAEECISVEFNPVRAGFHGGE------DVWTRDVLNLGVR 215
BLAST of mRNA_F-serratus_M_contig73.18524.1 vs. uniprot
Match: A0A5J4Y8J5_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y8J5_9CHLO) HSP 1 Score: 139 bits (351), Expect = 7.380e-36 Identity = 72/140 (51.43%), Postives = 93/140 (66.43%), Query Frame = 2
Query: 2 LLRADTGWTALRNMKTGGDAGPTPSFVMEDDTPLGDENPPAFDVIVCGGTLGIFMATALQIKGFKVGVVERGPLRGREQEWNISEAELEEMVEVGVLSEQDAEDCISVRFNPLRAGFKRAEGHPDAVDTFCPDVLNTGVK 421
L AD W + K G GP P+FV E TPL +DVI+CGGTLGIF+A +LQ+KG KV VVERGPL+GR+QEWNIS EL+E+V G+LS + ++CIS+ FNP+RAGF ++ + + DVLN GVK
Sbjct: 98 LQGADAAWAKAKAQKAGKPQGPPPNFVQEVQTPLSQSV--QYDVIMCGGTLGIFLACSLQLKGLKVAVVERGPLQGRQQEWNISRKELQELVHEGLLSTDEVDECISIEFNPVRAGFHGSQ------EVWTRDVLNLGVK 229
BLAST of mRNA_F-serratus_M_contig73.18524.1 vs. uniprot
Match: W7TPM3_9STRA (Fad dependent oxidoreductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPM3_9STRA) HSP 1 Score: 137 bits (345), Expect = 5.660e-35 Identity = 78/139 (56.12%), Postives = 92/139 (66.19%), Query Frame = 2
Query: 2 LLRADTGWTALRNMKTGGDAGPTPSFVMEDDTPLGDENPPAFDVIVCGGTLGIFMATALQIKGFKVGVVERGPLRGREQEWNISEAELEEMVEVGVLSEQDAEDCISVRFNPLRAGFKRAEGHPDAVDTFCPDVLNTGV 418
L D W A+ KTG +G P+FV E D PL P FDVIV GGTLGIFMATALQ KGF+V VVERGPLRGR QEWNIS E+ E+VE GVLS++D ED I + FNP+R GF + P + + DVL+ GV
Sbjct: 83 LEAIDRAWEAV---KTGRASGEAPTFVRETDVPLSTS--PKFDVIVAGGTLGIFMATALQRKGFRVCVVERGPLRGRTQEWNISRKEMMELVEEGVLSKEDVEDAIGIDFNPIRVGFVGEKNEPYTL--WTQDVLHLGV 214
BLAST of mRNA_F-serratus_M_contig73.18524.1 vs. uniprot
Match: A0A250WS10_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WS10_9CHLO) HSP 1 Score: 136 bits (343), Expect = 1.180e-34 Identity = 70/136 (51.47%), Postives = 90/136 (66.18%), Query Frame = 2
Query: 11 ADTGWTALRNMKTGGDAGPTPSFVMEDDTPLGDENPPAFDVIVCGGTLGIFMATALQIKGFKVGVVERGPLRGREQEWNISEAELEEMVEVGVLSEQDAEDCISVRFNPLRAGFKRAEGHPDAVDTFCPDVLNTGV 418
AD W+ LRN+ G GP P FV + P G +P FDV+VCGGTLGIF+ATAL +G +V V+ERGPLRGR QEWNIS+ E+EE+ + VLSE++ + CI+V FNP+R GF + + DVLN GV
Sbjct: 89 ADRAWSRLRNLPVGAAVGPAPRFVQQYQGPPGVPSP-EFDVVVCGGTLGIFVATALAARGLRVAVLERGPLRGRSQEWNISKKEMEELSKFSVLSEEEVQSCIAVEFNPVRIGFH------GGANVWTKDVLNIGV 217
BLAST of mRNA_F-serratus_M_contig73.18524.1 vs. uniprot
Match: A0A8J6CBB6_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBB6_DIALT) HSP 1 Score: 135 bits (341), Expect = 1.490e-34 Identity = 76/146 (52.05%), Postives = 95/146 (65.07%), Query Frame = 2
Query: 2 LLRADTGWTALRNMKTGGDAGPTPSFVMED-DTPLGDENPPAFDVIVCGGTLGIFMATALQIKGFKVGVVERGP-LRGREQEWNISEAELEEMVEVGVLSEQDAEDCISVRFNPLRAGFKRAEG----HPDAVDTFCPDVLNTGVK 421
L R D WT LR M TG AGP P+FV E + PLG FDV+VCGGT+GIF+A AL ++G KV V+ER P LRGREQ+WNIS EL E+V GVL+ + E+ I + FNP+R GF EG +AV+ + DVLN GV+
Sbjct: 21 LQRLDDAWTRLRTMPTGTAAGPPPAFVREHLNQPLGASA--QFDVLVCGGTIGIFIACALALRGLKVAVLERAPELRGREQDWNISRKELAELVASGVLTAGEVEEAIGIEFNPMRCGFAADEGGAGARAEAVEVWTDDVLNVGVR 164
BLAST of mRNA_F-serratus_M_contig73.18524.1 vs. uniprot
Match: A0A1Y1HH77_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HH77_KLENI) HSP 1 Score: 135 bits (341), Expect = 2.000e-34 Identity = 72/145 (49.66%), Postives = 93/145 (64.14%), Query Frame = 2
Query: 2 LLRADTGWTALRNMKTGGDAGPTPSFVME------DDTPLGDENPPAFDVIVCGGTLGIFMATALQIKGFKVGVVERGPLRGREQEWNISEAELEEMVEVGVLSEQDAEDCISVRFNPLRAGFKRAEGHPDAVDTFCPDVLNTGV 418
L RAD W +R MKTG +AGP P V E D G EN +DV+VCGGTLG+F+ATALQ++G +V +VERG L GR QEWNIS+ E++ +VE+GVL++++ ED IS+ FNP R GF + DVLN GV
Sbjct: 76 LKRADQNWARIRTMKTGREAGPAPETVKERRGSWRDVGTSGQENLGVYDVVVCGGTLGVFLATALQLRGKRVAIVERGVLMGRAQEWNISKQEMQSLVEMGVLTQEEVEDSISIEFNPGRCGFY------NGTQILVNDVLNLGV 214 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig73.18524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig73.18524.1 >prot_F-serratus_M_contig73.18524.1 ID=prot_F-serratus_M_contig73.18524.1|Name=mRNA_F-serratus_M_contig73.18524.1|organism=Fucus serratus male|type=polypeptide|length=128bp MKTGGDAGPTPSFVMEDDTPLGDENPPAFDVIVCGGTLGIFMATALQIKGback to top mRNA from alignment at F-serratus_M_contig73:449661..452721- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig73.18524.1 ID=mRNA_F-serratus_M_contig73.18524.1|Name=mRNA_F-serratus_M_contig73.18524.1|organism=Fucus serratus male|type=mRNA|length=3061bp|location=Sequence derived from alignment at F-serratus_M_contig73:449661..452721- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig73:449661..452721- >mRNA_F-serratus_M_contig73.18524.1 ID=mRNA_F-serratus_M_contig73.18524.1|Name=mRNA_F-serratus_M_contig73.18524.1|organism=Fucus serratus male|type=CDS|length=768bp|location=Sequence derived from alignment at F-serratus_M_contig73:449661..452721- (Fucus serratus male)back to top |