mRNA_F-serratus_M_contig73.18519.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig73.18519.1 vs. uniprot
Match: A0A6H5KWP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWP7_9PHAE) HSP 1 Score: 250 bits (638), Expect = 8.570e-77 Identity = 133/175 (76.00%), Postives = 147/175 (84.00%), Query Frame = 2
Query: 83 VAIAAPDISKPRQGHGQFDTYRFVTELEREGVPRNQAVAIMEQALLAISEAHSRQIALVATKQDLLTLKSEVNEKVFSSTLKFDLAQRHLKELMNRDLAQVKADVMQEEKFDIAKVHDEITELEKRVFQRRETDEVRFTHVHAEIAALERRVILQYGIGFFGSIIALGLAVARIA 607
+A AP+ S PRQGHG FDTYRFVTELER GVP+ QAV IMEQ LLAISEA++RQIALVATKQDLL+L+SE+NEKV+SSTL++DLAQRHLKELM RDL QVKADV EEKFD AK+HDEITELEKRVFQRRETDEVR VILQYGIGFFGS+IA+GLAVARIA
Sbjct: 41 LATPAPEASNPRQGHGAFDTYRFVTELERAGVPKGQAVMIMEQVLLAISEANTRQIALVATKQDLLSLQSEINEKVYSSTLRYDLAQRHLKELMQRDLMQVKADVRSEEKFDFAKLHDEITELEKRVFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARIA 215
BLAST of mRNA_F-serratus_M_contig73.18519.1 vs. uniprot
Match: D7FZX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX0_ECTSI) HSP 1 Score: 238 bits (606), Expect = 3.290e-72 Identity = 134/199 (67.34%), Postives = 147/199 (73.87%), Query Frame = 2
Query: 83 VAIAAPDISKPRQGHGQFDTYRFVTELEREGVPRNQAVAIMEQALLAISEAHSRQIALVATKQDLLTLKSEVNEKVFSSTLKFD------------------------LAQRHLKELMNRDLAQVKADVMQEEKFDIAKVHDEITELEKRVFQRRETDEVRFTHVHAEIAALERRVILQYGIGFFGSIIALGLAVARIA 607
+A AP+ S PRQGHG FDTYRFVTELER GVP+ QAV IMEQ LLAISEA++RQIALVATKQDLL+L+SE+NEKVFSSTL++D LAQRHLKELM RDL QVKADV EEKFD AK+HDEITELEKRVFQRRETDEVR VILQYGIGFFGS+IA+GLAVARIA
Sbjct: 3 LATPAPETSNPRQGHGAFDTYRFVTELERAGVPKGQAVMIMEQVLLAISEANTRQIALVATKQDLLSLQSEINEKVFSSTLRYDPAAPSIQSETIRRVLVGRCGCVSDLAQRHLKELMQRDLMQVKADVRSEEKFDFAKLHDEITELEKRVFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARIA 201
BLAST of mRNA_F-serratus_M_contig73.18519.1 vs. uniprot
Match: K3WEB9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEB9_GLOUD) HSP 1 Score: 115 bits (289), Expect = 3.080e-26 Identity = 60/159 (37.74%), Postives = 104/159 (65.41%), Query Frame = 2
Query: 134 FDTYRFVTELEREGVPRNQAVAIMEQALLAISEAHSRQIALVATKQDLLTLKSEVNEKVFSSTLKFDLAQRHLKELMNRDLAQVKADVMQEEKFDIAKVHDEITELEKRVFQRRETDEVRFTHVHAEIAALERRVILQYGIGFFGSIIALGLAVARIAM 610
FDT+R V L+ +G Q+ AI++ A++++ Q ++ATK + + LK+E++E+VF+STLKFD+AQRH++EL+ RD +K D+ EK D K+ EI E+EK+ +++ ++ + + +E+R+ LQY +GF G+I+A+G A+ R+ M
Sbjct: 43 FDTHRVVKRLQEQGFSAEQSEAILDVMKDAMADSLDAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHMRELLERDFNNLKQDIRMLEKIDFDKIRVEIAEIEKKFLLQKQAEDETLNELRLSMEKVEKRM-LQYAVGFAGTIMAVGAALMRLVM 200
BLAST of mRNA_F-serratus_M_contig73.18519.1 vs. uniprot
Match: G4YRP2_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YRP2_PHYSP) HSP 1 Score: 111 bits (277), Expect = 9.210e-25 Identity = 64/162 (39.51%), Postives = 104/162 (64.20%), Query Frame = 2
Query: 134 FDTYRFVTELEREGVPRNQAVAI---MEQALLAISEAHSRQIALVATKQDLLTLKSEVNEKVFSSTLKFDLAQRHLKELMNRDLAQVKADVMQEEKFDIAKVHDEITELEKRVFQRRETDEVRFTHVHAEIAALERRVILQYGIGFFGSIIALGLAVARIAM 610
FDT+ V L+ G +Q+ AI M++A+ A EA SR ++ATK + + LK+E++E+VF+STLKFD+AQRH +EL+ RD +K D+ EK D K+ EI ELEK+ +++ ++ + + +E+R+ LQY +GF G+I+A+G A+ R+ +
Sbjct: 27 FDTHNVVKSLQERGFTVDQSEAILQVMKEAMAASLEAQSR---ILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKRM-LQYAVGFAGTIMAVGAALLRLVL 184
BLAST of mRNA_F-serratus_M_contig73.18519.1 vs. uniprot
Match: A0A484DT41_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DT41_BRELC) HSP 1 Score: 112 bits (280), Expect = 9.910e-25 Identity = 61/160 (38.12%), Postives = 103/160 (64.38%), Query Frame = 2
Query: 131 QFDTYRFVTELEREGVPRNQAVAIMEQALLAISEAHSRQIALVATKQDLLTLKSEVNEKVFSSTLKFDLAQRHLKELMNRDLAQVKADVMQEEKFDIAKVHDEITELEKRVFQRRETDEVRFTHVHAEIAALERRVILQYGIGFFGSIIALGLAVARIAM 610
QFDT+ V L+ G +Q+ AI+E A++++ Q ++ATK + + LK+E++E+VF+STLKFD+AQRH +EL+ RD +K D+ EK D K+ EI ELEK+ +++ ++ + + +E+R+ LQY +GF G+I+A+G A+ R+ +
Sbjct: 66 QFDTHLVVKSLQERGFSADQSEAILEVMKDAMADSLQAQARILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLVRDFNTLKHDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKRM-LQYAVGFAGTIMAVGAALMRLVL 224
BLAST of mRNA_F-serratus_M_contig73.18519.1 vs. uniprot
Match: A0A6A3YP61_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YP61_9STRA) HSP 1 Score: 111 bits (277), Expect = 3.660e-24 Identity = 59/159 (37.11%), Postives = 103/159 (64.78%), Query Frame = 2
Query: 134 FDTYRFVTELEREGVPRNQAVAIMEQALLAISEAHSRQIALVATKQDLLTLKSEVNEKVFSSTLKFDLAQRHLKELMNRDLAQVKADVMQEEKFDIAKVHDEITELEKRVFQRRETDEVRFTHVHAEIAALERRVILQYGIGFFGSIIALGLAVARIAM 610
FDT++ V L+ G +Q+ AI++ A++++ Q ++ATK + + LK+E++E+VF+STLKFD+AQRH +EL+ RD +K D+ EK D K+ EI ELEK+ +++ ++ + + +E+R+ LQY +GF G+I+A+G A+ R+ +
Sbjct: 82 FDTHKVVKSLQENGFSVDQSEAILQVMKDAMADSLEAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKRM-LQYAVGFAGTIMAVGAALMRLVL 239
BLAST of mRNA_F-serratus_M_contig73.18519.1 vs. uniprot
Match: A0A329SD34_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SD34_9STRA) HSP 1 Score: 111 bits (277), Expect = 3.750e-24 Identity = 59/159 (37.11%), Postives = 103/159 (64.78%), Query Frame = 2
Query: 134 FDTYRFVTELEREGVPRNQAVAIMEQALLAISEAHSRQIALVATKQDLLTLKSEVNEKVFSSTLKFDLAQRHLKELMNRDLAQVKADVMQEEKFDIAKVHDEITELEKRVFQRRETDEVRFTHVHAEIAALERRVILQYGIGFFGSIIALGLAVARIAM 610
FDT+ V L+ +G +Q+ AI++ A++++ Q ++ATK + + LK+E++E+VF+STLKFD+AQRH +EL+ RD +K D+ EK D K+ EI ELEK+ +++ ++ + + +E+R+ LQY +GF G+I+A+G A+ R+ +
Sbjct: 83 FDTHNVVKSLQGKGFSTDQSEAILQVMKDAMADSLEAQARILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKRM-LQYAVGFAGTIMAVGAALMRLVL 240
BLAST of mRNA_F-serratus_M_contig73.18519.1 vs. uniprot
Match: A0A0P1ADT0_PLAHL (Uncharacterized membrane protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ADT0_PLAHL) HSP 1 Score: 110 bits (274), Expect = 4.790e-24 Identity = 59/159 (37.11%), Postives = 102/159 (64.15%), Query Frame = 2
Query: 134 FDTYRFVTELEREGVPRNQAVAIMEQALLAISEAHSRQIALVATKQDLLTLKSEVNEKVFSSTLKFDLAQRHLKELMNRDLAQVKADVMQEEKFDIAKVHDEITELEKRVFQRRETDEVRFTHVHAEIAALERRVILQYGIGFFGSIIALGLAVARIAM 610
FDT+ V L+ +G Q+ AI++ A++++ Q ++ATK + + LK+E++E+VF+STLKFD+AQRH +EL+ RD +K D+ EK D K+ EI ELEK+ +++ ++ + + +E+R+ LQY +GF G+I+A+G A+ R+ +
Sbjct: 54 FDTHHVVQSLQEKGFSIQQSEAILDVMKDAMADSLVAQARILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKRM-LQYAVGFAGTIMAVGAALLRLVL 211
BLAST of mRNA_F-serratus_M_contig73.18519.1 vs. uniprot
Match: A0A6A3LEP6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3LEP6_9STRA) HSP 1 Score: 110 bits (276), Expect = 5.900e-24 Identity = 59/159 (37.11%), Postives = 102/159 (64.15%), Query Frame = 2
Query: 134 FDTYRFVTELEREGVPRNQAVAIMEQALLAISEAHSRQIALVATKQDLLTLKSEVNEKVFSSTLKFDLAQRHLKELMNRDLAQVKADVMQEEKFDIAKVHDEITELEKRVFQRRETDEVRFTHVHAEIAALERRVILQYGIGFFGSIIALGLAVARIAM 610
FDT++ V L+ G Q+ AI++ A++++ Q ++ATK + + LK+E++E+VF+STLKFD+AQRH +EL+ RD +K D+ EK D K+ EI ELEK+ +++ ++ + + +E+R+ LQY +GF G+I+A+G A+ R+ +
Sbjct: 89 FDTHKVVKSLQENGFTVEQSEAILQVMKDAMADSLEAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKRM-LQYAVGFAGTIMAVGAALMRLVL 246
BLAST of mRNA_F-serratus_M_contig73.18519.1 vs. uniprot
Match: W2H4H8_PHYPR (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2H4H8_PHYPR) HSP 1 Score: 110 bits (275), Expect = 6.410e-24 Identity = 59/159 (37.11%), Postives = 103/159 (64.78%), Query Frame = 2
Query: 134 FDTYRFVTELEREGVPRNQAVAIMEQALLAISEAHSRQIALVATKQDLLTLKSEVNEKVFSSTLKFDLAQRHLKELMNRDLAQVKADVMQEEKFDIAKVHDEITELEKRVFQRRETDEVRFTHVHAEIAALERRVILQYGIGFFGSIIALGLAVARIAM 610
FDT+ V L+ +G +Q+ AI++ A++++ Q ++ATK + + LK+E++E+VF+STLKFD+AQRH +EL+ RD +K D+ EK D K+ EI ELEK+ +++ ++ + + +E+R+ LQY +GF G+I+A+G A+ R+ +
Sbjct: 79 FDTHNVVKSLQDKGFSPDQSEAILQVMKDAMADSLEAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKRM-LQYAVGFAGTIMAVGAALLRLVL 236 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig73.18519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig73.18519.1 >prot_F-serratus_M_contig73.18519.1 ID=prot_F-serratus_M_contig73.18519.1|Name=mRNA_F-serratus_M_contig73.18519.1|organism=Fucus serratus male|type=polypeptide|length=138bp MEQALLAISEAHSRQIALVATKQDLLTLKSEVNEKVFSSTLKFDLAQRHLback to top mRNA from alignment at F-serratus_M_contig73:231505..239189- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig73.18519.1 ID=mRNA_F-serratus_M_contig73.18519.1|Name=mRNA_F-serratus_M_contig73.18519.1|organism=Fucus serratus male|type=mRNA|length=7685bp|location=Sequence derived from alignment at F-serratus_M_contig73:231505..239189- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig73:231505..239189- >mRNA_F-serratus_M_contig73.18519.1 ID=mRNA_F-serratus_M_contig73.18519.1|Name=mRNA_F-serratus_M_contig73.18519.1|organism=Fucus serratus male|type=CDS|length=828bp|location=Sequence derived from alignment at F-serratus_M_contig73:231505..239189- (Fucus serratus male)back to top |