mRNA_F-serratus_M_contig7272.18505.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7272.18505.1 vs. uniprot
Match: D8LCF8_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF8_ECTSI) HSP 1 Score: 120 bits (302), Expect = 3.350e-29 Identity = 60/90 (66.67%), Postives = 73/90 (81.11%), Query Frame = 1
Query: 307 YRIPTKIPEKVRINSEVKDISVKVERFTEKKAFEGGYRHRQTGRIFHHASTQFGQWKKVVKQTGHLRARDTQTCKVKSTTMQTTNEYGTQ 576
YR+P +I KV + EVK++S+K+ERF K F+GGYRHR TGR+FHHASTQFGQ ++ VK T HLR RDTQTCK+K+TTMQTTNE GTQ
Sbjct: 2 YRMPEEIAVKVLVEGEVKEMSIKLERFEGTKVFQGGYRHRGTGRLFHHASTQFGQRERPVKNTDHLRTRDTQTCKIKTTTMQTTNECGTQ 91
BLAST of mRNA_F-serratus_M_contig7272.18505.1 vs. uniprot
Match: A0A836CKY2_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKY2_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 3.720e-16 Identity = 50/101 (49.50%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 283 WPDYCDPAYRIPTKIPEKV-RINSEVKDISVKVERFTEK--KAFEGGYRHRQTGRIFHHASTQFGQWKKVVKQTGHLRARDTQTCKVKSTTMQTTNEYGTQ 576
+P YCDP YR+PT++ +V R + + + I V VE+ E K + GGY+ R TG+ FHHASTQFG K+VVK T +LR+RDTQT ++++ QT E GTQ
Sbjct: 4 YPTYCDPFYRMPTELAVRVERGDGDAEVIVVMVEKCPEGGCKPYLGGYKARATGKTFHHASTQFGSRKRVVKDTSNLRSRDTQTVQLRTVRAQTRRECGTQ 104
BLAST of mRNA_F-serratus_M_contig7272.18505.1 vs. uniprot
Match: A0A7S4DG95_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG95_HETAK) HSP 1 Score: 77.8 bits (190), Expect = 1.370e-14 Identity = 46/102 (45.10%), Postives = 62/102 (60.78%), Query Frame = 1
Query: 283 WPDYCDPAYRIPTKIPEKVRINS--EVKDISVKVERFTEKKAFEGGYRHRQTGRIFHHAS--TQFGQWKKVVKQTGHLRARDTQTCKVKSTTMQTTNEYGTQ 576
WP+YC+PAY++P I KV I E + I V +ER +K + GGYRH++TG +FHHA T+ KK K T +L +RDTQT + + QT E GTQ
Sbjct: 31 WPEYCNPAYKMPNLIEVKVVIEETGEERYIPVAIERAEYRKKYLGGYRHKKTGAVFHHAQSQTEISTGKKAPKDTSNLFSRDTQTAQFLTRGQQTKREAGTQ 132
BLAST of mRNA_F-serratus_M_contig7272.18505.1 vs. uniprot
Match: A0A7S2CMW8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMW8_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 3.120e-9 Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 1
Query: 268 PATPEWPDYCDPAYRIPTKIPEKV-RINSEVKDISVKVERFTEK-KAFEGGYRHRQTGRIFHHASTQFGQWKKVVKQTGHLRA-----RDTQTCKVKSTTMQTTNEYGTQ 576
P PEWP YCDP Y +P + V R N + + +E+ EK K + GGYRH+ TG ++HHAS+Q + K+ G + RDTQT +K+ + T E+GTQ
Sbjct: 27 PIQPEWPSYCDPDYIMPNSMSVSVKRQNGTIFKFDISIEKTAEKNKPYLGGYRHKGTGFVYHHASSQTPAG--LDKRIGWINPENKTHRDTQTYDMKTRSQMTVREHGTQ 134
BLAST of mRNA_F-serratus_M_contig7272.18505.1 vs. uniprot
Match: A0A8J2SZI2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZI2_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 3.960e-9 Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = 1
Query: 262 PTPATPEWPDYCDPAYRIPTKIPEKV-RINSEVKDISVKVERFTEKKAFEGGYRHRQTGRIFHHASTQFGQWKKVVKQTGHL---------RARDTQTCKVKSTTMQTTNEYGTQ 576
P T EWP Y DP+Y++P I V + N + ++V +E+ +K + GGYRH++TGR++HHAS+Q VV G L R RD+QT S + Q+ EYGTQ
Sbjct: 13 PAAPTEEWPPYADPSYKMPASIEVTVQKRNEDDVTLTVNIEKENTRKPYLGGYRHKKTGRVYHHASSQ-----SVV--LGCLPRYPDPDTRRHRDSQTVVAISRSQQSLREYGTQ 120
BLAST of mRNA_F-serratus_M_contig7272.18505.1 vs. uniprot
Match: A0A7S2UXR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXR8_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.970e-8 Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 271 ATPEWPDYCDPAYRIPTKIPEKVRINS--EVKDISVKVERFTEKKAFEGGYRHRQTGRIFHHASTQ 462
+T +WP YC+P Y++P+ I +V I E + + V V +F +K + GGYRHR+T +++HHAS Q
Sbjct: 54 STGDWPPYCNPTYKMPSVIEVQVHIEETGETRYLPVFVNKFQGRKRYLGGYRHRETQKVYHHASCQ 119
BLAST of mRNA_F-serratus_M_contig7272.18505.1 vs. uniprot
Match: A0A7J7KSB8_BUGNE (IQUB n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KSB8_BUGNE) HSP 1 Score: 58.2 bits (139), Expect = 1.600e-6 Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 1
Query: 307 YRIPTKIPEKVRINSE-VKDISVKVERFTEKKAFEGGYRHRQTGRIFHHASTQFGQWKKVVKQTGHLRARDTQTCKVKSTTMQTTNEYGTQ 576
Y +P I KV + KD+ V+VER T KK + GGYRH+QTG FHHAS Q G + + RDTQT ++K QT+ + TQ
Sbjct: 366 YVMPDVITVKVETEPQRYKDVVVEVERSTRKKPYLGGYRHKQTGVEFHHASAQTGPKSRAISNVERY-CRDTQTYQMKHIRQQTSEDTYTQ 455
BLAST of mRNA_F-serratus_M_contig7272.18505.1 vs. uniprot
Match: K1QE72_CRAGI (IQ and ubiquitin-like domain-containing protein n=5 Tax=Crassostrea gigas TaxID=29159 RepID=K1QE72_CRAGI) HSP 1 Score: 56.2 bits (134), Expect = 7.140e-6 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 307 YRIPTKIPEKVRIN-SEVKDISVKVERFTEKKAFEGGYRHRQTGRIFHHASTQFGQWKKVVKQTGHLRARDTQTCKVKSTTMQTTNEYGTQ 576
Y +P I +V+ + ++ KD+ V++ER T KK + GGYRH++TG ++HHA+ Q + + Q RDTQT + K QTTN+ TQ
Sbjct: 271 YHMPDVITVRVQTDENQSKDVVVEIERATRKKPYLGGYRHKKTGVLYHHATAQTVKKQPPPSQIPK-NCRDTQTVQQKHRVQQTTNDTSTQ 360
BLAST of mRNA_F-serratus_M_contig7272.18505.1 vs. uniprot
Match: A0A8J1YVP8_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1YVP8_9DINO) HSP 1 Score: 55.5 bits (132), Expect = 1.170e-5 Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 1
Query: 358 KDISVKVERFTEKKAFEGGYRHRQTGRIFHHASTQFGQWKKVV-KQTGHLRARDTQTCKVKSTTMQTTNEYGTQ 576
+ ISV+VER E K + GG+RH+ TG IFHH STQ + +++V K+ H RDTQT ++ ++Q+T E GTQ
Sbjct: 139 RQISVQVERQAEIKPYIGGFRHKGTGAIFHHGSTQTAKTEQIVHKEKTH---RDTQTVDQRTRSVQSTRETGTQ 209
BLAST of mRNA_F-serratus_M_contig7272.18505.1 vs. uniprot
Match: F0Y8I3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8I3_AURAN) HSP 1 Score: 55.1 bits (131), Expect = 1.370e-5 Identity = 31/73 (42.47%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 364 ISVKVERFTEKKAFEGGYRHRQTGRIFHHASTQFGQWKKVV--KQTGHLRARDTQTCKVKSTTMQTTNEYGTQ 576
++V V + T +K + GGYRH++TG+++HHAS Q ++ + K LR RDTQT + K+ + Q+ EYGTQ
Sbjct: 1 VTVDVAKCTTRKPYLGGYRHKKTGKVYHHASCQSAEFGLLPQRKNVECLRNRDTQTYETKTRSAQSNREYGTQ 73 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7272.18505.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7272.18505.1 >prot_F-serratus_M_contig7272.18505.1 ID=prot_F-serratus_M_contig7272.18505.1|Name=mRNA_F-serratus_M_contig7272.18505.1|organism=Fucus serratus male|type=polypeptide|length=193bp LGDDTQGARRTAQTTEAKSEEATTRVATALDTNFDDDLARGDVDRDTPEVback to top mRNA from alignment at F-serratus_M_contig7272:19791..20370- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7272.18505.1 ID=mRNA_F-serratus_M_contig7272.18505.1|Name=mRNA_F-serratus_M_contig7272.18505.1|organism=Fucus serratus male|type=mRNA|length=580bp|location=Sequence derived from alignment at F-serratus_M_contig7272:19791..20370- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7272:19791..20370- >mRNA_F-serratus_M_contig7272.18505.1 ID=mRNA_F-serratus_M_contig7272.18505.1|Name=mRNA_F-serratus_M_contig7272.18505.1|organism=Fucus serratus male|type=CDS|length=1158bp|location=Sequence derived from alignment at F-serratus_M_contig7272:19791..20370- (Fucus serratus male)back to top |