mRNA_F-serratus_M_contig721.18462.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig721.18462.1 vs. uniprot
Match: D7FPC8_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPC8_ECTSI) HSP 1 Score: 463 bits (1192), Expect = 4.430e-149 Identity = 318/664 (47.89%), Postives = 381/664 (57.38%), Query Frame = 2
Query: 434 METFRSLEVLWLNDNYLSDITSLDFNPTIRSLHAHNNRIKTLKGSLLAFKFLHTLTLGXXXXXXXXXXXXXXXXXRHLRYLDLTGNPLADETGYRLLVIKKLPWLETLDMHKVTDEERHAACRMPLPKSWKASALGRHKEDSAEVTQDLAAKEKNNNMSWEGRRG---SISEPLPAEHPTKIQART--MLEKELSRMRETVKNHRILLKEWFRAEDPRQEGVVLESLFIRCLRQHGLWPPTEGTAVESLKWTEGAPIEGTAINTTSAAPATLLAGETGLLASTLLEAFRVHRPPTRARFLGRDPVYLRQIFINYVAFCSAVEPKHGGRDPDNSQGERGERELDKVRKAKTAIQDSGGMPACREKGRVEPASLRSQEGLDGCDRGRDGEKIEYLHGTVNFPRATLVSCSKNTSKGKTLNTSGSVGGLDHLERIELKRAFYEARRGDLVETTLAMVSRPQALSALKAMETRGRRPRIFNLAPPLSTDEDSFNQLSEASRGRSSETTASVERGTQSTNFDVLFDAAVAETSKDGVNKATRSGVTGTHEHHRG---------------SADIAVLMXXXXXXXXXXPAEGIVA---LAPLEWVWLSRVEAEGRARELYREASLAQRRLLLLVSGDKDDAVQLEAAAPIRDNIAVLTRNAARLENLAAA 2356
ME F SLEVLW+NDN LS IT+LD+NPTI+SL+AHNNRI TLKGSLLAF FLHTLTLGXXXXXXXX RHLRYL+L+GNPLA+ETGYRLLVIK LPWLETLDMHK+T+EER +A R +PKSW+ASA G H DS +TQDLAA+E N W+G RG + ++P PA R +L KELSRM VK RILLKEWF AED R+E VV + LF RCLR HGLWP A + T LAG+ GL+ LLEAFR PP RA LGRDPV+L Q F+NYV+FC AVEPKHGGRD D+ + R LDK KAK S P+ + PAS RS + I T P ++C N S+ SG G LDH ERIELKR + + G L ++R QA S +K M +GRRPRI+ + P LS+D+DS N LS G S + A++ G+ TN DVLFDAA AD+ VL+ EG+ A + PLEW WLS EA RAR++YREAS AQRR+ L+ ++D+AV+ EA IR IAVLTRNAARLE LA+A
Sbjct: 1 MEAFESLEVLWVNDNSLSRITNLDYNPTIKSLYAHNNRIGTLKGSLLAFTFLHTLTLGXXXXXXXXASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSARRARVPKSWEASARGAH-SDSVRLTQDLAAEETKN---WQGDRGGGANTADPSPAAARPLDTKRMQGLLRKELSRMTAIVKQRRILLKEWFMAEDARREEVVTQHLFTRCLRSHGLWPDVGPDAADEADNTG------------------FLAGKKGLVGGLLLEAFRAS-PPRRAVSLGRDPVFLGQSFVNYVSFCGAVEPKHGGRDLDDQR-----RVLDKAWKAKPKSPRSS-QPSPTQVLPKHPASGRSWDSGAXXXXXXXXGPISECPDTEVLPARAPMACEFNKSRN-----SGGPGQLDHWERIELKRIL-DGQGGSTPPAKL-FLTRKQAFSGIKKMVIQGRRPRIYGIEPQLSSDDDSLNSLSGIGEGGSGKVVAAIPDGSSRTNLDVLFDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDPQADVRVLLRTLE--------EGVSAPGGVGPLEWDWLSGEEARDRARKMYREASHAQRRMQLMAD-EEDEAVRQEADQ-IRSKIAVLTRNAARLEALASA 618
BLAST of mRNA_F-serratus_M_contig721.18462.1 vs. uniprot
Match: A0A0D2JHS7_9CHLO (Leucine-rich repeat-containing protein 23 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JHS7_9CHLO) HSP 1 Score: 104 bits (259), Expect = 1.510e-20 Identity = 66/159 (41.51%), Postives = 81/159 (50.94%), Query Frame = 2
Query: 329 VMAKPREELHN---NPKLIANCKELHLGRRGITCLPDDMETFRSLEVLWLNDNYLSDITSLDFNPTIRSLHAHNNRIKTLKGSLLAFKFLHTLTLGXXXXXXXXXXXXXXXXXRHLRYLDLTGNPLADETGYRLLVIKKLPWLETLDMHKVTDEERHAA 796
V++ P EL + N K I +C EL L R I L E +LE LWLN N L T LD N +R L+ H+N++ TL+GSL KFL L LG X GNP +E GYRL V+ +LPWLE LD H+VTD ER A
Sbjct: 27 VISHPLAELADGGRNAKSIKDCTELCLSGRAIERL-HGFEPLVNLEALWLNGNALRCATGLDANTRLRELYLHDNQLCTLRGSLGRLKFLTHLDLGGNLLRDLPKVLARLERXXXXXXXXXQGNPCCEEPGYRLQVVHRLPWLEVLDWHQVTDAERRRA 184
BLAST of mRNA_F-serratus_M_contig721.18462.1 vs. uniprot
Match: A0A6G0WL28_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WL28_9STRA) HSP 1 Score: 106 bits (264), Expect = 9.190e-20 Identity = 66/153 (43.14%), Postives = 83/153 (54.25%), Query Frame = 2
Query: 332 MAKPREELHN-NPKLIANCKELHLGRRGITCLPDDMETFRSLEVLWLNDNYLSDITSLDFNPTIRSLHAHNNRIKTLKGSLLAFKFLHTLTLGXXXXXXXXXXXXXXXXXRHLRYLDLTGNPLADETGYRLLVIKKLPWLETLDMHKVTDEER 787
+++P +EL N K + C EL + R I + + E F SLEVLWLN+N + DIT LD I+ L+ NNRI TL+GSL F FL L L HL LDL GNPLA+E YRL VI +P L+ D H VT +ER
Sbjct: 316 VSEPHKELAVCNEKYVKACTELVMSHRNIDVI-GNFEAFVSLEVLWLNENNIQDITGLDNCFRIKCLYLQNNRISTLQGSLRHFTFLRELRLFNNRLHDLHTTLRQLSKLLHLEDLDLFGNPLAEEDKYRLHVIAAIPSLQIFDRHVVTPDER 467
BLAST of mRNA_F-serratus_M_contig721.18462.1 vs. uniprot
Match: A0A1R2AQ04_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AQ04_9CILI) HSP 1 Score: 91.7 bits (226), Expect = 9.480e-16 Identity = 56/142 (39.44%), Postives = 73/142 (51.41%), Query Frame = 2
Query: 362 NPKLIANCKELHLGRRGITCLPDDMETFRSLEVLWLNDNYLSDITSLDFNPTIRSLHAHNNRIKTLKGSLLAFKFLHTLTLGXXXXXXXXXXXXXXXXXRHLRYLDLTGNPLADETGYRLLVIKKLPWLETLDMHKVTDEER 787
N K NC E+HL GI L + E+F +LEV WLN+N + +IT+LD I+ + NN + TL+GSL FKFL T G + L+L GNP A+E YR VI LP L+ D H+V ER
Sbjct: 16 NAKSARNCAEVHLSDSGIEVL-GNFESFPNLEVAWLNNNKIREITNLDTCFRIKHFYIENNCLTTLEGSLKKFKFLQTFLAGNNNLRGLDKALKILSKLTCIERLNLYGNPCAEEPYYRQKVIVALPNLKIFDRHEVNYLER 156
BLAST of mRNA_F-serratus_M_contig721.18462.1 vs. uniprot
Match: F0YDM7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDM7_AURAN) HSP 1 Score: 83.2 bits (204), Expect = 4.460e-15 Identity = 50/125 (40.00%), Postives = 68/125 (54.40%), Query Frame = 2
Query: 428 DDMETFRSLEVLWLNDNYLSDITSLDFNPTIRSLHAHNNRIKTLKGSLLAFKFLHT--LTLGXXXXXXXXXXXXXXXXXRHLRYLDLTGNPLADETGYRLLVIKKLPWLETLDMHKVTDEERHAA 796
+ + F +L+ LWL+ N L + L+ N I L+A +NR+ +L+GS + + LH L L R L+ LDL NPLA+ET YRL VIK +PWLE LD K+T EER A
Sbjct: 12 EGFDKFPNLKYLWLSRNKLRRLDGLEANFRIHCLYAGHNRVASLEGSSVG-RLLHVEELILNDNRLEDLKTHVDILQRLRRLKRLDLYNNPLAEETSYRLHVIKAMPWLEVLDQMKITPEERAKA 135
BLAST of mRNA_F-serratus_M_contig721.18462.1 vs. uniprot
Match: H2YA28_CIOSA (Uncharacterized protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2YA28_CIOSA) HSP 1 Score: 78.6 bits (192), Expect = 2.280e-12 Identity = 51/147 (34.69%), Postives = 69/147 (46.94%), Query Frame = 2
Query: 368 KLIANCKELHLGRRGITCLPDDMETFRSLEVLWLNDNYLSDITSLDF-------NPTIRSLHAHNNRIKTLKGSLLAFKFLHTLTLGXXXXXXXXXXXXXXXXXRHLRYLDLTGNPLADETGYRLLVIKKLPWLETLDMHKVTDEER 787
K +N EL+LG+ G+T + + + FR L+ LWLN N L + D N I LH N + ++ G L ++L L L LR L+L NP+A E+GYRLLVI LP + LD VT ER
Sbjct: 17 KQDSNVVELYLGKHGLTSI-NSLGRFRQLQRLWLNGNCLRSLIDNDIKQSFLKNNHRITELHLQCNELSSVAGCLSHLRYLQVLMLQKNQLVNLNAVLHEISPLHALRVLNLFDNPVAHESGYRLLVIHSLPSVALLDREAVTSNER 162
BLAST of mRNA_F-serratus_M_contig721.18462.1 vs. uniprot
Match: A0A3R7LAG9_9TRYP (Putative leucine-rich repeat-containing protein 72-like n=1 Tax=Trypanosoma conorhini TaxID=83891 RepID=A0A3R7LAG9_9TRYP) HSP 1 Score: 72.8 bits (177), Expect = 2.520e-9 Identity = 60/189 (31.75%), Postives = 77/189 (40.74%), Query Frame = 2
Query: 317 EGSEVMAKPREELHNNPKLIANCKELHLGRRGITCLPDDMETFRSLEVLWLNDNYLSDITSL--DFNPT---------------------------IRSLHAHNNRIKTLKGSLLAFKFLHTLTLGXXXXXXXXXXXXXXXXXRHLRYLDLTGNPLADETGYRLLVIKKLPWLETLDMHKVTDEERHAA 796
E EV P L KEL L R+GIT L +++ ++L+ L + N L I L NP +R L+A +N ++TL G + + L L L R LR LDL GNPL DE GYRL +I + P LE LD V DEER A
Sbjct: 92 EEQEVCLDPIRALKIPRARFHTVKELTLCRKGITRLHSNVQLLKNLDTLIIRHNRLRQIAFLIPPRNPRAAASSSKAQEEGTVAEAAHGAARGCRLLRRLYASHNCLQTLDGDVGQLRHLEVLFLAHNRLSNLSAVSAQLKLLRCLRELDLRGNPLCDEVGYRLFLIHEHPHLEVLDRRVVRDEERKEA 280
BLAST of mRNA_F-serratus_M_contig721.18462.1 vs. uniprot
Match: A0A061J685_TRYRA (Uncharacterized protein n=1 Tax=Trypanosoma rangeli SC58 TaxID=429131 RepID=A0A061J685_TRYRA) HSP 1 Score: 72.4 bits (176), Expect = 3.030e-9 Identity = 73/189 (38.62%), Postives = 94/189 (49.74%), Query Frame = 2
Query: 317 EGSEVMAKPREELHNNPKLIANCKELHLGRRGITCLPDDMETFRSLEVLWLNDNYL------------------------SDITSLDFNPT-----IRSLHAHNNRIKTLKGSLLAFKFLHTLTLGXXXXXXXXXXXXXXXXXRHLRYLDLTGNPLADETGYRLLVIKKLPWLETLDMHKVTDEERHAA 796
E EV P L KEL L R+GIT L +++ ++L+ L + N L S++TS + + +R L+A +N ++TL G + + L XXXXXXXXXXXXXXX R LR LDL GNPL DE GYRL +I + P LE LD H V DEER A
Sbjct: 78 EEQEVCLDPIRALKIPRSRFHTVKELTLCRKGITRLHSNVQLLKNLDTLIIRHNRLRQIAFLITPRNSHGAASSSGAQEESNLTSTAYGASRGCRLLRRLYASHNCLQTLDGDVSQLRQLXXXXXXXXXXXXXXXXXXXXXPLRCLRELDLRGNPLCDEVGYRLFLIYEHPHLEVLDRHVVRDEERKEA 266
BLAST of mRNA_F-serratus_M_contig721.18462.1 vs. uniprot
Match: UPI0004F499B1 (putative leucine-rich repeat-containing protein 72-like n=1 Tax=Trypanosoma grayi TaxID=71804 RepID=UPI0004F499B1) HSP 1 Score: 70.5 bits (171), Expect = 1.210e-8 Identity = 54/166 (32.53%), Postives = 71/166 (42.77%), Query Frame = 2
Query: 386 KELHLGRRGITCLPDDMETFRSLEVLWLNDNYLSDITSL-------DFNPTI-------------------RSLHAHNNRIKTLKGSLLAFKFLHTLTLGXXXXXXXXXXXXXXXXXRHLRYLDLTGNPLADETGYRLLVIKKLPWLETLDMHKVTDEERHAACRM 805
KEL L R+GIT L +++ +L+ L + N L I L P I R L+A +N ++TL G + + L L L R LR LDL GNPL DE GYRL +I +LP LE LD V +ER A +
Sbjct: 96 KELTLCRKGITRLHPNVQLLENLDTLIIRHNRLRQIAFLLKPRYAHGAPPVIEDSAAVEIPYGGARGCRLLRRLYASHNNLQTLDGDVSRLRQLEVLALANNRLSNLTAVSTQLKPLRCLRELDLRGNPLCDEVGYRLFLIYELPQLEVLDRRAVRYDERKEAAAL 261
BLAST of mRNA_F-serratus_M_contig721.18462.1 vs. uniprot
Match: K2N8P0_TRYCR (Uncharacterized protein n=1 Tax=Trypanosoma cruzi marinkellei TaxID=85056 RepID=K2N8P0_TRYCR) HSP 1 Score: 69.7 bits (169), Expect = 2.210e-8 Identity = 57/189 (30.16%), Postives = 79/189 (41.80%), Query Frame = 2
Query: 317 EGSEVMAKPREELHNNPKLIANCKELHLGRRGITCLPDDMETFRSLEVLWLNDNYLSDITSLD--------FNPT---------------------IRSLHAHNNRIKTLKGSLLAFKFLHTLTLGXXXXXXXXXXXXXXXXXRHLRYLDLTGNPLADETGYRLLVIKKLPWLETLDMHKVTDEERHAA 796
E EV P L +EL L R+GIT L +++ ++L+ L + +N L I L F+ + +R L+A +N ++TL G + + L L L + LR LDL GNPL DE GYRL +I + P LE LD V DEER A
Sbjct: 80 EEQEVCLDPIRALRIPRSRFHTVRELTLCRKGITRLHSNVQLLKNLDTLIIRNNRLRQIDFLIPPRNSREVFSDSRVHEESALVEIPHGTLRGCRFLRHLYASHNCLQTLDGDVPYLRHLEVLFLAHNRLSNLNAVSAQLRPLKCLRELDLRGNPLCDEEGYRLFLIHEHPHLEVLDRRVVRDEERKEA 268 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig721.18462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig721.18462.1 >prot_F-serratus_M_contig721.18462.1 ID=prot_F-serratus_M_contig721.18462.1|Name=mRNA_F-serratus_M_contig721.18462.1|organism=Fucus serratus male|type=polypeptide|length=801bp MRCNPSSGSIRYQDEGSEVMAKPREELHNNPKLIANCKELHLGRRGITCLback to top mRNA from alignment at F-serratus_M_contig721:373173..389853- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig721.18462.1 ID=mRNA_F-serratus_M_contig721.18462.1|Name=mRNA_F-serratus_M_contig721.18462.1|organism=Fucus serratus male|type=mRNA|length=16681bp|location=Sequence derived from alignment at F-serratus_M_contig721:373173..389853- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig721:373173..389853- >mRNA_F-serratus_M_contig721.18462.1 ID=mRNA_F-serratus_M_contig721.18462.1|Name=mRNA_F-serratus_M_contig721.18462.1|organism=Fucus serratus male|type=CDS|length=4806bp|location=Sequence derived from alignment at F-serratus_M_contig721:373173..389853- (Fucus serratus male)back to top |