mRNA_F-serratus_M_contig721.18459.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A6H5K580_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K580_9PHAE) HSP 1 Score: 159 bits (401), Expect = 5.870e-40 Identity = 75/140 (53.57%), Postives = 102/140 (72.86%), Query Frame = -3
Query: 99 PRALLSDNGPQFCALLATTVYKLLGIHKLTTSAYHPSRNRGVERVNHTMA*ILAMVCNEHLSRLERPFPHVEYTYHDSVSTATGLAPKDAHIRRLPRLALTVFDRSYGGIHQNFDRDQFAHCDLTRERQQRAYELVREHN 518
P +LSDNG FC+ L+ +Y+++ I K+TTS+YHP N G ERVNHTMA +LA+V NE + + PHVE+ Y++SV+ +TGLAP + HI R+PRL L+VFDR G HQ+ RDQ +C+L +RQ+RAYELVRE+N
Sbjct: 29 PTTILSDNGLHFCSKLSMAIYEVMKIKKVTTSSYHPQTNGGTERVNHTMAQMLAVVVNEQQNDWDIHLPHVEFAYNNSVNQSTGLAPNEIHIGRIPRLPLSVFDRPTVGGHQSLARDQLEYCNLAVDRQRRAYELVREYN 168
BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A6H5KU23_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU23_9PHAE) HSP 1 Score: 157 bits (397), Expect = 4.700e-39 Identity = 75/140 (53.57%), Postives = 101/140 (72.14%), Query Frame = -3
Query: 99 PRALLSDNGPQFCALLATTVYKLLGIHKLTTSAYHPSRNRGVERVNHTMA*ILAMVCNEHLSRLERPFPHVEYTYHDSVSTATGLAPKDAHIRRLPRLALTVFDRSYGGIHQNFDRDQFAHCDLTRERQQRAYELVREHN 518
P LLSDNG FC+ L+ +Y+++ I K+TTS+YHP N G ERVNHTMA +LA+V NE + + PHV + Y++SV+ +TGLAP + HI R+PRL L+VFDR G HQ+ RDQ +C+L +RQ+RAYELVRE+N
Sbjct: 137 PTTLLSDNGLHFCSKLSMAIYEVMKIKKVTTSSYHPQTNGGTERVNHTMAQMLAVVVNEQQNDWDIHLPHVAFAYNNSVNQSTGLAPNEIHIGRIPRLPLSVFDRPTVGGHQSLARDQLEYCNLAVDRQRRAYELVREYN 276
BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A6H5KPF8_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF8_9PHAE) HSP 1 Score: 157 bits (397), Expect = 9.960e-39 Identity = 77/140 (55.00%), Postives = 97/140 (69.29%), Query Frame = -3
Query: 99 PRALLSDNGPQFCALLATTVYKLLGIHKLTTSAYHPSRNRGVERVNHTMA*ILAMVCNEHLSRLERPFPHVEYTYHDSVSTATGLAPKDAHIRRLPRLALTVFDRSYGGIHQNFDRDQFAHCDLTRERQQRAYELVREHN 518
P LSDNG Q C+ L+ +Y+L+ I K+TTS+YHP N G ERVNHTMA +LA+V NE + PHVE+ Y++SV+TATGLAP + HI RLPRL L+V D G HQ+ DRDQ A C+L E Q+RAY LVRE +
Sbjct: 183 PVTFLSDNGMQICSELSMAIYELMNIRKVTTSSYHPQTNGGAERVNHTMAQMLAVVVNERQDDWDVHLPHVEFAYNNSVNTATGLAPNEVHIGRLPRLPLSVLDHPSVGGHQSLDRDQLAFCNLAVEHQRRAYALVREQH 322
BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE) HSP 1 Score: 164 bits (416), Expect = 1.510e-38 Identity = 80/141 (56.74%), Postives = 101/141 (71.63%), Query Frame = -3
Query: 99 PRALLSDNGPQFCALLATTVYKLLGIHKLTTSAYHPSRNRGVERVNHTMA*ILAMVCNEHLSRLERPFPHVEYTYHDSVSTATGLAPKDAHIRRLPRLALTVFDRSYGGIHQNFDRDQFAHCDLTRERQQRAYELVRE-HN 518
P +LLSDNG QFC+ L+ VY L I K+ TS+YHP+ N GVERVNHTMA +LAMV NE + PHVE+ Y++SVS ATGLAP + HI RLPR+ +TVF+ Y HQ+ RDQ +CDL +RQ+R+Y+LVRE HN
Sbjct: 985 PLSLLSDNGSQFCSKLSQAVYARLAIRKVATSSYHPNGNGGVERVNHTMAQMLAMVVNERQDDWDIHLPHVEFAYNNSVSAATGLAPNEVHINRLPRMPMTVFEHPYARGHQSLHRDQLEYCDLAADRQRRSYDLVREQHN 1125
BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A6H5J7Q8_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Q8_9PHAE) HSP 1 Score: 150 bits (378), Expect = 2.480e-38 Identity = 72/140 (51.43%), Postives = 97/140 (69.29%), Query Frame = -3
Query: 99 PRALLSDNGPQFCALLATTVYKLLGIHKLTTSAYHPSRNRGVERVNHTMA*ILAMVCNEHLSRLERPFPHVEYTYHDSVSTATGLAPKDAHIRRLPRLALTVFDRSYGGIHQNFDRDQFAHCDLTRERQQRAYELVREHN 518
P L SDNG FC+ L+ +Y+++ I K+ TS+YHP N G ERVNHTMA +LA+V NE + + P VE+ Y++SV+ +TGLAP + HI R+PRL L+VFD G HQ+ RDQ HC+L +RQ+RAY LVRE+N
Sbjct: 29 PTPLFSDNGLYFCSKLSMAIYEVMKIKKVITSSYHPQTNGGAERVNHTMAQMLAVVVNEQQNDWDIHLPRVEFAYNNSVNQSTGLAPNEIHIGRMPRLPLSVFDHPTEGGHQSLARDQLQHCNLAVDRQRRAYGLVREYN 168
BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A6H5KZ08_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ08_9PHAE) HSP 1 Score: 158 bits (399), Expect = 9.080e-38 Identity = 76/140 (54.29%), Postives = 101/140 (72.14%), Query Frame = -3
Query: 99 PRALLSDNGPQFCALLATTVYKLLGIHKLTTSAYHPSRNRGVERVNHTMA*ILAMVCNEHLSRLERPFPHVEYTYHDSVSTATGLAPKDAHIRRLPRLALTVFDRSYGGIHQNFDRDQFAHCDLTRERQQRAYELVREHN 518
P LLSDNG FC+ L+ +Y+++ I K+TTS+YHP N G ERVNHTMA +LA V NE + + PHVE+ Y++SV+ +TGLAP + HI R+PRL L+VFDR G HQ+ RDQ +C+L +RQ+RAYELVRE+N
Sbjct: 70 PTTLLSDNGLHFCSKLSMAIYEVMKIKKVTTSSYHPPTNGGTERVNHTMAQMLAAVVNEQQNDWDIHLPHVEFAYNNSVNQSTGLAPNEIHIGRIPRLPLSVFDRPTVGGHQSLARDQLDYCNLAVDRQRRAYELVREYN 209
BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A6H5JU82_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU82_9PHAE) HSP 1 Score: 156 bits (395), Expect = 1.640e-37 Identity = 74/140 (52.86%), Postives = 101/140 (72.14%), Query Frame = -3
Query: 99 PRALLSDNGPQFCALLATTVYKLLGIHKLTTSAYHPSRNRGVERVNHTMA*ILAMVCNEHLSRLERPFPHVEYTYHDSVSTATGLAPKDAHIRRLPRLALTVFDRSYGGIHQNFDRDQFAHCDLTRERQQRAYELVREHN 518
P LLSDNG FC+ L+ +Y+++ I ++TTS+YHP N G ERVNHTMA +LA+V NE + + PHVE+ Y++SV+ +TGLAP + HI R+PRL L+VFD G HQ+ RDQ +C+L +RQ+RAYELVRE+N
Sbjct: 135 PTTLLSDNGLHFCSKLSMAIYEVMKIKRVTTSSYHPQTNGGTERVNHTMAQMLAVVVNEQQNDWDIHLPHVEFIYNNSVNQSTGLAPSEIHIGRIPRLPLSVFDHPTVGGHQSLARDQLEYCNLAGDRQRRAYELVREYN 274
BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A6H5K1F8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F8_9PHAE) HSP 1 Score: 160 bits (404), Expect = 2.330e-37 Identity = 76/140 (54.29%), Postives = 102/140 (72.86%), Query Frame = -3
Query: 99 PRALLSDNGPQFCALLATTVYKLLGIHKLTTSAYHPSRNRGVERVNHTMA*ILAMVCNEHLSRLERPFPHVEYTYHDSVSTATGLAPKDAHIRRLPRLALTVFDRSYGGIHQNFDRDQFAHCDLTRERQQRAYELVREHN 518
P LLSDNG FC+ L+ +Y+++ I K+TTS+YHP N G ERVNHTMA +LA+V NE + + PHVE+ Y++SV+ +TGLAP + HI R+PRL L+VFDR G HQ+ RDQ +C+L +RQ+RAYELVRE+N
Sbjct: 634 PTTLLSDNGLHFCSKLSMAIYEVMKIKKVTTSSYHPQTNGGTERVNHTMAQMLAVVVNEQQNDWDIHLPHVEFAYNNSVNQSTGLAPNEIHIGRIPRLPLSVFDRPTVGGHQSLARDQLEYCNLAGDRQRRAYELVREYN 773
BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A6H5KAD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAD8_9PHAE) HSP 1 Score: 159 bits (401), Expect = 2.760e-37 Identity = 78/141 (55.32%), Postives = 99/141 (70.21%), Query Frame = -3
Query: 99 PRALLSDNGPQFCALLATTVYKLLGIHKLTTSAYHPSRNRGVERVNHTMA*ILAMVCNEHLSRLERPFPHVEYTYHDSVSTATGLAPKDAHIRRLPRLALTVFDRSYGGIHQNFDRDQFAHCDLTRERQQRAYELVRE-HN 518
P +LLSDNG QFC+ L+ VY L I K+ TS+YHP+ N GVERVNHTMA +LAMV NE + PHVE+ Y++SVS ATGLAP + HI RLPR+ +TVF+ Y HQ+ RDQ +CDL +RQ+ +Y LVR+ HN
Sbjct: 464 PLSLLSDNGSQFCSKLSQAVYARLAIRKVATSSYHPNGNGGVERVNHTMAQMLAMVVNERQDDWDIHLPHVEFAYNNSVSAATGLAPNEVHINRLPRMPMTVFEHPYARGHQSLHRDQLEYCDLAADRQRCSYGLVRQQHN 604
BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A6H5L5E4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E4_9PHAE) HSP 1 Score: 159 bits (403), Expect = 4.580e-37 Identity = 76/140 (54.29%), Postives = 102/140 (72.86%), Query Frame = -3
Query: 99 PRALLSDNGPQFCALLATTVYKLLGIHKLTTSAYHPSRNRGVERVNHTMA*ILAMVCNEHLSRLERPFPHVEYTYHDSVSTATGLAPKDAHIRRLPRLALTVFDRSYGGIHQNFDRDQFAHCDLTRERQQRAYELVREHN 518
P LLSDNG FC+ L+ +Y+++ I K+TTS+YHP N G ERVNHTMA +LA+V NE + + PHVE+ Y++SV+ +TGLAP + HI R+PRL L+VFDR G HQ+ RDQ +C+L +RQ+RAYELVRE+N
Sbjct: 757 PTTLLSDNGLHFCSKLSMAIYEVMKIKKVTTSSYHPQTNGGTERVNHTMAQMLAVVVNEQQNDWDIHLPHVEFAYNNSVNQSTGLAPNEIHIGRIPRLPLSVFDRPTVGGHQSLARDQLEYCNLAVDRQRRAYELVREYN 896 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig721.18459.1 >prot_F-serratus_M_contig721.18459.1 ID=prot_F-serratus_M_contig721.18459.1|Name=mRNA_F-serratus_M_contig721.18459.1|organism=Fucus serratus male|type=polypeptide|length=57bp MLSIGILGIIVGAHHMFTVGLDIDTRSYSTAATMITAIPTGFIIFFCWIAback to top mRNA from alignment at F-serratus_M_contig721:284784..287890+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig721.18459.1 ID=mRNA_F-serratus_M_contig721.18459.1|Name=mRNA_F-serratus_M_contig721.18459.1|organism=Fucus serratus male|type=mRNA|length=3107bp|location=Sequence derived from alignment at F-serratus_M_contig721:284784..287890+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig721:284784..287890+ >mRNA_F-serratus_M_contig721.18459.1 ID=mRNA_F-serratus_M_contig721.18459.1|Name=mRNA_F-serratus_M_contig721.18459.1|organism=Fucus serratus male|type=CDS|length=342bp|location=Sequence derived from alignment at F-serratus_M_contig721:284784..287890+ (Fucus serratus male)back to top |