mRNA_F-serratus_M_contig721.18457.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig721.18457.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 174 bits (441), Expect = 2.850e-48 Identity = 101/256 (39.45%), Postives = 150/256 (58.59%), Query Frame = 1
Query: 1 LDQHSYLRTVALKFNVEKTSTTPAAAGRKPLSKEDAAQTEAETEEMRVTPYREAVGALMWAATMTRPDFAYAAHQLGKFNDSSEPVHWRAAKSALQYLWRTKDVGITYGGSPGSCTQLSASVDADFTPCPDTRHSGLGVAVMLGGGAISWSSRVQKVTANASSESEYMALAEVVNELRFLRQVKGFLTPPIDNNIV-IREDSEGAIEMAINRFSSRRTRHVDVKHHIVRDVVESVVVQIHYVKSVEQHADVLTKAL 765
+ Q +Y + ++F VE P G K LS+ D + EE+ P+RE +G+LMW AT TRPD A A + ++ S + +HWRA L Y+ RT D+GIT+ + + VDAD+ R S G VM GGG ISW SR QK +++E+EY++LA+V+ E+ FLRQV F+ P + + ED++GAI++A N S+ ++H+DV+HH +R++V + I +V+S QHAD LTKAL
Sbjct: 174 ISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 422
BLAST of mRNA_F-serratus_M_contig721.18457.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE) HSP 1 Score: 168 bits (426), Expect = 1.270e-47 Identity = 102/247 (41.30%), Postives = 148/247 (59.92%), Query Frame = 1
Query: 34 LKFNVEKTSTTPAAAGRKPLSKEDAAQTEAETEEMRVTPYREAVGALMWAATMTRPDFAYAAHQLGKFNDSSEPVHWRAAKSALQYLWRTKDVGITYGGSPGSCTQLSASV--DADFTPCPDTRHSGLGVAVMLGGGAISWSSRVQKVTANASSESEYMALAEVVNELRFLRQVKGFLTPPIDNNIV-IREDSEGAIEMAINRFSSRRTRHVDVKHHIVRDVVESVVVQIHYVKSVEQHADVLTKAL 765
++F VE P G K LS+ D + EE+ P+RE +G+LMW AT TRPD A A + ++ S + +HWRA L Y+ RT D+GIT+ GS LS V DAD+ R S G VM GGG +SW SR QK +++E+EY++LA+V+ E+ FLRQV+ F+ P + + ED++GAI++A N S+ ++H+DV+HH +R++V + I +V+S QHAD LTKAL
Sbjct: 1 MEFGVEYGKEIPLPVGLK-LSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITF--RRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKAL 238
BLAST of mRNA_F-serratus_M_contig721.18457.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 174 bits (441), Expect = 5.450e-47 Identity = 101/256 (39.45%), Postives = 150/256 (58.59%), Query Frame = 1
Query: 1 LDQHSYLRTVALKFNVEKTSTTPAAAGRKPLSKEDAAQTEAETEEMRVTPYREAVGALMWAATMTRPDFAYAAHQLGKFNDSSEPVHWRAAKSALQYLWRTKDVGITYGGSPGSCTQLSASVDADFTPCPDTRHSGLGVAVMLGGGAISWSSRVQKVTANASSESEYMALAEVVNELRFLRQVKGFLTPPIDNNIV-IREDSEGAIEMAINRFSSRRTRHVDVKHHIVRDVVESVVVQIHYVKSVEQHADVLTKAL 765
+ Q +Y + ++F VE P G K LS+ D + EE+ P+RE +G+LMW AT TRPD A A + ++ S + +HWRA L Y+ RT D+GIT+ + + VDAD+ R S G VM GGG ISW SR QK +++E+EY++LA+V+ E+ FLRQV F+ P + + ED++GAI++A N S+ ++H+DV+HH +R++V + I +V+S QHAD LTKAL
Sbjct: 348 ISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 596
BLAST of mRNA_F-serratus_M_contig721.18457.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE) HSP 1 Score: 166 bits (421), Expect = 2.070e-46 Identity = 105/259 (40.54%), Postives = 150/259 (57.92%), Query Frame = 1
Query: 1 LDQHSYLRTVALKFNVEKTSTTPAAAGRKPLSKEDAAQTEAETEEMRVTPYREAVGALMWAATMTRPDFAYAAHQLGKFNDSSEPVHWRAAKSALQYLWRTKDVGITYGGSPGSCTQLSASV--DADFTPCPDTRHSGLGVAVMLGGGAISWSSRVQKVTANASSESEYMALAEVVNELRFLRQVKGFLTPPIDNNIV-IREDSEGAIEMAINRFSSRRTRHVDVKHHIVRD-VVESVVVQIHYVKSVEQHADVLTKAL 765
+ Q +Y + ++F VE P G K LS+ D + EE+ P+RE +G+LMW AT TRPD A A + ++ S + +HWRA L Y+ RT D GIT+ GS LS V DAD+ R S G VM GGG ISW SR QK +++E+EY++LA+V+ E+ FLRQV F+ P + + ED++GAI++A N S+ +H+DV+HH +R+ VV + I +V+S QHAD LT+AL
Sbjct: 73 ISQQTYAEELGMEFGVEYGKEIPLPVGMK-LSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITF--RRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTRAL 322
BLAST of mRNA_F-serratus_M_contig721.18457.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE) HSP 1 Score: 163 bits (413), Expect = 1.420e-45 Identity = 98/256 (38.28%), Postives = 147/256 (57.42%), Query Frame = 1
Query: 1 LDQHSYLRTVALKFNVEKTSTTPAAAGRKPLSKEDAAQTEAETEEMRVTPYREAVGALMWAATMTRPDFAYAAHQLGKFNDSSEPVHWRAAKSALQYLWRTKDVGITYGGSPGSCTQLSASVDADFTPCPDTRHSGLGVAVMLGGGAISWSSRVQKVTANASSESEYMALAEVVNELRFLRQVKGFLTPPIDNNIV-IREDSEGAIEMAINRFSSRRTRHVDVKHHIVRDVVESVVVQIHYVKSVEQHADVLTKAL 765
+ Q +Y + + + F VE G K LS+ D + EE+ P+RE +G+LMW AT TRP+ A AA + ++ S + +HWRA L Y+ RT D+GIT+G + + DAD+ R S G VM G G ISW SR Q+ +++E+EY++LA+V+ E+ FLRQV F+ P + + ED++GAI++A N S+ ++H DV+HH + ++V + I YV+S QHAD LTKAL
Sbjct: 29 ISQQTYAQELGMDFGVEYGKEILFPVGLK-LSEFD------QDEEVVSWPFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISIFYVESAYQHADFLTKAL 277
BLAST of mRNA_F-serratus_M_contig721.18457.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 172 bits (437), Expect = 2.040e-45 Identity = 100/256 (39.06%), Postives = 150/256 (58.59%), Query Frame = 1
Query: 1 LDQHSYLRTVALKFNVEKTSTTPAAAGRKPLSKEDAAQTEAETEEMRVTPYREAVGALMWAATMTRPDFAYAAHQLGKFNDSSEPVHWRAAKSALQYLWRTKDVGITYGGSPGSCTQLSASVDADFTPCPDTRHSGLGVAVMLGGGAISWSSRVQKVTANASSESEYMALAEVVNELRFLRQVKGFLTPPIDNNIV-IREDSEGAIEMAINRFSSRRTRHVDVKHHIVRDVVESVVVQIHYVKSVEQHADVLTKAL 765
+ Q +Y + ++F VE P G K LS+ D + EE+ P+RE +G+LMW AT TRPD A A + ++ S + +HWRA L Y+ RT D+GIT+ + + VDAD+ R S G VM GGG ISW SR QK +++E+EY++LA+V+ E+ FLRQV F+ P + + ED++GAI++A N S+ ++H+DV+HH +R++V + I +V+S QHA+ LTKAL
Sbjct: 869 ISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKAL 1117
BLAST of mRNA_F-serratus_M_contig721.18457.1 vs. uniprot
Match: UPI00143DE9DD (secreted RxLR effector protein 161-like n=1 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143DE9DD) HSP 1 Score: 159 bits (401), Expect = 2.910e-44 Identity = 86/206 (41.75%), Postives = 128/206 (62.14%), Query Frame = 1
Query: 148 PYREAVGALMWAATMTRPDFAYAAHQLGKFNDSSEPVHWRAAKSALQYLWRTKDVGITYGGSPGSCTQLSASVDADFTPCPDTRHSGLGVAVMLGGGAISWSSRVQKVTANASSESEYMALAEVVNELRFLRQVKGFLTPPIDNNIVIREDSEGAIEMAINRFSSRRTRHVDVKHHIVRDVVESVVVQIHYVKSVEQHADVLTKAL 765
PYREA+GAL++AA + RPD YA + L +F D+ HW A K L+YL T+D+GI +G S SC ++ DAD+ C +T+ S G L GG ISWSS+ Q V + +++E+EY+ALA E +L ++ L P +I + D++ AI +A N +R++H+DV++H VRD++ ++ I+YV S EQ ADV TK L
Sbjct: 33 PYREAIGALLFAARVCRPDIEYAINYLSQFVDAHNRTHWSAVKQILRYLSGTRDLGIVFGNSGSSC-EIRGYTDADYAGCLETQKSRSGFVFQLNGGPISWSSQRQSVVSLSTAEAEYIALAHGTREAIWLHRILNDLKLPC-TSISLFVDNQSAINLAKNSEFHKRSKHIDVRYHFVRDILNREIISINYVASKEQLADVFTKPL 236
BLAST of mRNA_F-serratus_M_contig721.18457.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE) HSP 1 Score: 158 bits (400), Expect = 2.310e-43 Identity = 87/215 (40.47%), Postives = 130/215 (60.47%), Query Frame = 1
Query: 124 ETEEMRVTPYREAVGALMWAATMTRPDFAYAAHQLGKFNDSSEPVHWRAAKSALQYLWRTKDVGITYGGSPGSCTQLSASVDADFTPCPDTRHSGLGVAVMLGGGAISWSSRVQKVTANASSESEYMALAEVVNELRFLRQVKGFLTPPIDNNIV-IREDSEGAIEMAINRFSSRRTRHVDVKHHIVRDVVESVVVQIHYVKSVEQHADVLTKAL 765
E E P+RE VG+LMW AT TRPD A A + ++ S + VHW+AA L Y+ RT +GIT+ + + VDAD+ R S G VM GGG ++W SR QK +++E+EY+A+A+V+ E+ FLRQV F+ P + + ED++GAI++A N ++ ++H+DV+HH +R++VE + I V + QHAD LTKA+
Sbjct: 91 ENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAI 305
BLAST of mRNA_F-serratus_M_contig721.18457.1 vs. uniprot
Match: A0A6H5L0C9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C9_9PHAE) HSP 1 Score: 166 bits (421), Expect = 2.350e-43 Identity = 97/256 (37.89%), Postives = 149/256 (58.20%), Query Frame = 1
Query: 1 LDQHSYLRTVALKFNVEKTSTTPAAAGRKPLSKEDAAQTEAETEEMRVTPYREAVGALMWAATMTRPDFAYAAHQLGKFNDSSEPVHWRAAKSALQYLWRTKDVGITYGGSPGSCTQLSASVDADFTPCPDTRHSGLGVAVMLGGGAISWSSRVQKVTANASSESEYMALAEVVNELRFLRQVKGFLTPPIDNNIV-IREDSEGAIEMAINRFSSRRTRHVDVKHHIVRDVVESVVVQIHYVKSVEQHADVLTKAL 765
+ Q +Y + ++F VE P G K LS+ D + EE+ P+RE +G+LMW AT TRPD A A + ++ S + +HWRA L + RT D+GIT+ + + DAD+ R S G V+ GGG ISW SR QK +++E+EY++LA+V+ E+ FLRQV F+ P + + + ED++GAI++A N S+ ++H+DV+HH +R++V + I +V+S Q+AD LTKAL
Sbjct: 633 ISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYYASPKEIHWRAGLGILGCVVRTSDLGITFRRRSVAGLSIEVFADADYASKAADRRSVSGGLVICGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMSCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQYADFLTKAL 881
BLAST of mRNA_F-serratus_M_contig721.18457.1 vs. uniprot
Match: A0A6H5LC04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC04_9PHAE) HSP 1 Score: 165 bits (418), Expect = 7.130e-43 Identity = 101/258 (39.15%), Postives = 151/258 (58.53%), Query Frame = 1
Query: 1 LDQHSYLRTVALKFNVEKTSTTPAAAGRKPLSKEDAAQTEAETEEMRVTPYREAVGALMWAATMTRPDFAYAAHQLGKFNDSSEPVHWRAAKSALQYLWRTKDVGITYGGSPGSCTQLSASV--DADFTPCPDTRHSGLGVAVMLGGGAISWSSRVQKVTANASSESEYMALAEVVNELRFLRQVKGFLTPPIDNNIV-IREDSEGAIEMAINRFSSRRTRHVDVKHHIVRDVVESVVVQIHYVKSVEQHADVLTKAL 765
+ Q +Y + ++F VE P G LS+ D + EE+ P+RE +G+L+W AT TRPD A A + ++ S + +HWRA L Y+ RT D+GIT+G GS LS V DAD+ R S G VM GGG ISW SR QK +++E+EY+++A+V+ EL FLR+V F+ P + + ED++ A+++A N S+ ++H+DV+HH +R++V + I +V+S QHAD LTKAL
Sbjct: 865 ISQQTYAEELGMEFGVEYGKEIPLPVGLV-LSEFD------QDEEVVSWPFRELIGSLVWLATQTRPDIANALRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGR--GSVAMLSMEVFGDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSVADVMKELLFLRKVWRFMLPEAGMPCIPVFEDNQRALQLAQNPISNSNSKHIDVRHHSIRELVGREEISIFHVESAYQHADFLTKAL 1113 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig721.18457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig721.18457.1 >prot_F-serratus_M_contig721.18457.1 ID=prot_F-serratus_M_contig721.18457.1|Name=mRNA_F-serratus_M_contig721.18457.1|organism=Fucus serratus male|type=polypeptide|length=255bp LDQHSYLRTVALKFNVEKTSTTPAAAGRKPLSKEDAAQTEAETEEMRVTPback to top mRNA from alignment at F-serratus_M_contig721:229553..230317- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig721.18457.1 ID=mRNA_F-serratus_M_contig721.18457.1|Name=mRNA_F-serratus_M_contig721.18457.1|organism=Fucus serratus male|type=mRNA|length=765bp|location=Sequence derived from alignment at F-serratus_M_contig721:229553..230317- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig721:229553..230317- >mRNA_F-serratus_M_contig721.18457.1 ID=mRNA_F-serratus_M_contig721.18457.1|Name=mRNA_F-serratus_M_contig721.18457.1|organism=Fucus serratus male|type=CDS|length=1530bp|location=Sequence derived from alignment at F-serratus_M_contig721:229553..230317- (Fucus serratus male)back to top |