mRNA_F-serratus_M_contig721.18454.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig721.18454.1
Unique NamemRNA_F-serratus_M_contig721.18454.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig721.18454.1 vs. uniprot
Match: D8LMW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW3_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 1.480e-70
Identity = 161/270 (59.63%), Postives = 188/270 (69.63%), Query Frame = 1 
Query:    1 MAGFNRREHAYVAQAFDPSNFPRHKLAESQVPTKESRDVYGAATSGDVERLKSALAAGGNPNWYNHSDEGATALHKAAEGGHVGCIEVLLKSGRVTNVAVIDERLLTSHNSPLHLACAIGHLDVVKQLLSKGAPVNSGNSYGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLLHFLVYSP-MEDGDSQAVGRKLIEAGVNVDAKDMDGMTPLHVVARGGNATMAAFLLDNGADRTIEDTEGKTALRWAQLNTHTAVGLLLTDER 807
            MA F +REHAYVAQA DPS  P HKLAE+Q+PTK++RD+YGAATSG++  LK ALAAG N NWYN S++GATALH+AA GGHVGC+E LLK+G     +VIDERLLT+ NS                 L+  A VN+GNSYGN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+LLHFL YS  M   D +A+  KL++AGVN+D+KD DGMTPLHVV + G+  MA F                   +WAQ N H  VG LL D R
Sbjct:    1 MAAF-QREHAYVAQALDPSQIPEHKLAENQLPTKKNRDLYGAATSGNLSELKVALAAGANSNWYNKSEDGATALHRAASGGHVGCVEQLLKNG-----SVIDERLLTNSNSAXXXXXXXXXXXXXXXXLASSAAVNAGNSYGNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLHFLAYSTAMPPADKKALALKLVQAGVNLDSKDEDGMTPLHVVGQSGDKEMATFXXXXXXXXXXXXXXXXXXXQWAQTNRHAEVGSLLHDAR 264
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BLAST of mRNA_F-serratus_M_contig721.18454.1 vs. uniprot
Match: A0A835ZFX4_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFX4_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.210e-30
Identity = 83/216 (38.43%), Postives = 118/216 (54.63%), Query Frame = 1 
Query:   55 SNFPRHKLAESQVPTKESRDVYGAATSGDVERLKSALAAGGNPNWYNHSDEGATALHKAAEGGHVGCIEVLLKSGRVTNVAVIDERLLTSHNSPLHLACAIGHLDVVKQLLSKGAPVNSGNSYGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTL--LHFLVYSPMEDGDSQAVGRKLIEAGVNVDAKDMDGMTPLHVVARGGNATMAAFL 696
            ++ P HKLA +Q+PT  +  +Y AA +G++ R++  L  G +PNW+ + +EGATA+HKAAEGGH   +++L++ G      V+D+ LLT+ N+P                 + GAPV + N++GN                       XXXXXXXXXX    LHFL YS     +  A+   L +AG +V AKD  GMTPLH+ AR G A + A L
Sbjct:   17 ADLPPHKLAANQLPTPANVTLYEAAKAGNLRRVRRCLDNGASPNWFQNPEEGATAMHKAAEGGHTDILQLLIERG-----GVLDDALLTNRNTPXXXXXXXXXXXXXXXXXAAGAPVGAANAFGNTPLHAALMSSRPLMDLVKLLLSNXXXXXXXXXXXXXXLHFLAYSKFSGEEKMALCEILDDAGADVAAKDDQGMTPLHLAARDGQAALVAAL 227
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BLAST of mRNA_F-serratus_M_contig721.18454.1 vs. uniprot
Match: A0A7S3Y456_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y456_HETAK)

HSP 1 Score: 96.3 bits (238), Expect = 7.600e-20
Identity = 56/170 (32.94%), Postives = 83/170 (48.82%), Query Frame = 1 
Query:   55 SNFPRHKLAESQVPTKESRDVYGAATSGDVERLKSALAAGGNPNWYNHSDEGATALHKAAEGGHVGCIEVLLKSGRVTNVAVIDERLLTSHNSPLHLACAIGHLDVVKQLLSKGAP--VNSGNSYGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLLHFLVYSP 558
            S  P +  AE+Q  T  S  +Y AA  G++ +++  L+ GGNPNW+NH DEGATAL  A  GGH+     L+  G     A ++ RLLTS ++ LH+ CA   L++++ L+   A   V++ N++GN                                 + LHF  YSP
Sbjct:   29 SKLPEYYKAENQQKTPISTSLYEAAKEGNLVKIQECLSEGGNPNWFNHDDEGATALFAACIGGHLEAARALVAGG-----AAVEPRLLTSKDTVLHMCCAHNRLEILQFLVEGPAADMVDAENTFGNTPLHVACMGSNPDMVRFLLQHGASSRRANKRGSSALHFAAYSP 193
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BLAST of mRNA_F-serratus_M_contig721.18454.1 vs. uniprot
Match: B8BY68_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY68_THAPS)

HSP 1 Score: 83.2 bits (204), Expect = 9.220e-14
Identity = 73/258 (28.29%), Postives = 117/258 (45.35%), Query Frame = 1 
Query:   34 VAQAFDPSNFPRHKLAESQVPTKESRDVYGAATSGDVERLKSALAAGGNPNWYNHSDEGATA-LHKAAEGGHVG--------CIEVLLKSGRVTNVAVIDERLLTSHNSPLHLACAIGHLDVVKQLLSKGAP-VNSGNSYGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLLH---FLVYSPMEDGDSQA------VGRKLIEAGVNVDAKDMDGMTPLHVVARGGNATMAAFLLDNGADRTIE---DTEGK 741
            V  + + +  P +   E Q  + ++ ++Y AA +GD+ RL++AL  G +PN++N +D+G    LH AA+   +         C + L+  G   + A+I  R     N+P+H A + G   V + L+        S NS+GN     XXXXXX                      T LH   FL  +  E G              L +  ++VD KD++G T LH+ A+ G   M   L+D+GA  T +   D++G+
Sbjct:  392 VMGSIERAEVPEYLCGERQWNSSQNTELYDAAANGDIRRLRNALEKGADPNYFNRNDDGTPGVLHAAAKAELLSNKDNEAALCAKELIGKGARVSAALISNR-----NAPIHEAASAGSKGVCEVLIEASPKCTKSENSFGNTALHAXXXXXXVDVVRLLLEKGADSNKTNHRGSTALHIACFLASNGKEGGTMPTDPYLNIAAILLCDNALDVDTKDVNGYTALHIAAQRGCNDMVRLLIDSGASLTAKTYIDSKGR 644
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BLAST of mRNA_F-serratus_M_contig721.18454.1 vs. uniprot
Match: A0A7S1M9J8_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1M9J8_NEODS)

HSP 1 Score: 67.4 bits (163), Expect = 8.800e-9
Identity = 59/216 (27.31%), Postives = 91/216 (42.13%), Query Frame = 1 
Query:  124 AATSGDVERLKSALAAGGNPNWYNHSD-EGATALHKAAEGGHVGCIEVLLKSGRVTNVAVIDERLLTSHNSPLHLACAIGHLDVVKQLLSKGAPVNSGNSYGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLLHFLVYSPMEDGDSQAVGRKLIEAGVNVDAKDMDGMTPLHVVARGGNATMAAFLLDNGADRTIEDTEGKTALRWAQLN 768
            AA + DV R K  L     P+  N +  EG TALH AA  G+V  +E+LL+     N    +      H +PL +A  +   D + +L+  GA VN     G+                                 ++LH   +S    GD   VG  + +  V+V+ +D++G+TPL+V  R G   +  FLL+ GAD  +   +    L +   N
Sbjct:   19 AARADDVARCKEMLQE--QPDMINRAGAEGYTALHFAAYNGNVRMVEMLLEFKPELNARTAE------HATPLAIAAKMKQHDAITKLVECGADVNCSGPTGSAAHIAASLGNTATLKLLVALGAKVDSCESDAG-SVLHCACHS----GDVDTVGTIVHDFAVDVNVRDVNGLTPLYVACRAGKQEVTQFLLELGADPNLAANDKSLPLHFVAEN 221
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BLAST of mRNA_F-serratus_M_contig721.18454.1 vs. uniprot
Match: A0A2L2YGE0_PARTP (Protein phosphatase 1 regulatory subunit 16A n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YGE0_PARTP)

HSP 1 Score: 66.6 bits (161), Expect = 2.250e-8
Identity = 61/233 (26.18%), Postives = 95/233 (40.77%), Query Frame = 1 
Query:   43 AFDPSNFPRHKLAES-QVPTKESRDVYGAATSGDVERLKSALAAGGNPNWYNHSDEGATALHKAAEGGHVGCIEVLLKSGRVTNVAVIDERLLTSHNSPLHLACAIGHLDVVKQLLSKGAPVNSGNSYGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLLHFLVYSPMEDGDSQAVGRK-LIEAGVNVDAKDMDGMTPLHVVARGGNATMAAFLLDNGADRTIEDTE 735
            A  P   P+ K  +S +V    S  +  AA   DVE ++  L  G +P+  N  ++G TALH+         +++LL+ G   NV   D    T    PLH A   GH+ +V+ L+SKGA + + N+ GN                                  +                V  K ++E G +++ +D  G TPLH+ A  G  T+  F+LDN     + D +
Sbjct:   54 AATPDLIPKSKSNKSYKVHFVPSVMLLEAAARNDVEEVRRLLMLGVSPDSTN--EDGLTALHQCCIDDSEAMMKLLLEFG--ANVNAKDSEQWT----PLHAAATCGHIHLVRYLISKGADLLAVNADGNMPYDICEDETTLDYIESEMAKKGITQEMIDETRAITE----------QEMLVDLKCMLEDGGDIEYRDQQGATPLHIAAANGYVTVVEFILDNHGSTNVCDND 268
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BLAST of mRNA_F-serratus_M_contig721.18454.1 vs. uniprot
Match: UPI001FB7D2D3 (trichohyalin-like isoform X1 n=4 Tax=Penaeus chinensis TaxID=139456 RepID=UPI001FB7D2D3)

HSP 1 Score: 64.3 bits (155), Expect = 1.530e-7
Identity = 58/227 (25.55%), Postives = 92/227 (40.53%), Query Frame = 1 
Query:  106 SRDVYGAATSGDVERLKSALAAGGNPNWYNHSDEGATALHKAAEGGHVGCIEVLLKSGRVTNVAVIDERLLTSHNSPLHLACAIGHLDVVKQLLSKGAPVNSGNSYGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLLHFLVYSPMEDGDSQAVGRK-LIEAGVNVDAKDMDGMTPLHVVARGGNATMAAFLLDNGADRTIEDTEGKTALRWAQLNTHTAV 783
            + ++  AA  GD + +++AL  G N N+      G TALH AA  G+V    +L+      +V V   +      +PLHLA   G+  V++ LL  GA + + +S G                                         + P+    +Q      L+    N+ A+  D  TPLH  A  G   +  +L+ NGAD TI+D +G+  +  A+   H  V
Sbjct:    5 TEELIRAAREGDAQGVEAALKEGANINFLGKG--GWTALHHAAFEGNVDMTRLLISFN--ADVGVSSGKKSEGGVTPLHLAAEAGYDLVMEALLEAGADITASDSNG-----------------------------------------FQPVHWATTQVTALAVLLNHDCNLSAQARDLSTPLHHAATEGKLDVVKWLVQNGADNTIKDKDGRLPVDRAKKKKHREV 186
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BLAST of mRNA_F-serratus_M_contig721.18454.1 vs. uniprot
Match: A0A166BL33_EXIGL (Ankyrin n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A166BL33_EXIGL)

HSP 1 Score: 62.0 bits (149), Expect = 1.600e-7
Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 1 
Query:  568 GDSQAVGRKLIEAGVNVDAKDMDGMTPLHVVARGGNATMAAFLLDNGADRTIEDTEGKTALRWAQLNTHTAVGLLL 795
            GD   +   +  AGV+++A+D  G TPLH+ A  G+  M   LL +GAD +I+D +G+TAL  AQ++ H A+  LL
Sbjct:  147 GDIDRLKTLITHAGVDLNAQDEFGFTPLHLAADRGSEEMVKLLLGHGADPSIKDPDGETALSLAQVSDHAAIIALL 222
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BLAST of mRNA_F-serratus_M_contig721.18454.1 vs. uniprot
Match: A0A3A3FKW6_9BURK (Ankyrin repeat domain-containing protein n=1 Tax=Noviherbaspirillum saxi TaxID=2320863 RepID=A0A3A3FKW6_9BURK)

HSP 1 Score: 61.2 bits (147), Expect = 3.050e-7
Identity = 63/237 (26.58%), Postives = 92/237 (38.82%), Query Frame = 1 
Query:   61 FPRHKLAESQVPTKESRDVYGAATSGDVERLKSALAAGGNPNWYNHSDEGATALHKAAEGGHVGCIEVLLKSGRVTNVAVID-ERLLTSHNSPLHLACAIGHLDVVKQLLSKGAPVNSGNSYGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLLHFLVYSPMEDGDSQAVGRKLIEAGVNVDAKDMDGMTPLHVVARGGNATMAAFLLDNGADRTIEDTEGKTALRWAQLN 768
            FP   L+          D + A     V  +KS LA G +PN    ++ G T L  A     +G  E+LL      N   ID E    + N+ L  A   G+L  VK L++KGA VN                                        T LH+       D     + + L+E    +DA   +  TP+ + ARGG+      LLD GAD ++++  G TA+ +A+ N
Sbjct:   20 FPLMALSGRHASAGAYDDFFRAVKIDHVAVVKSLLARGLDPNLIE-AERGETGLMLALREKSMGVFELLL------NAPAIDLEVQAFNGNTALMFASYQGNLQAVKALIAKGAEVNK------------------------------------PGWTPLHYAASIGNND-----IVQLLLEKSAYIDADSPNKTTPIMMAARGGHIMTVKLLLDEGADASLKNDAGMTAIDFAEKN 208
[Close]
BLAST of mRNA_F-serratus_M_contig721.18454.1 vs. uniprot
Match: A0A3S3K9I4_9HYPH (C-type cytochrome n=9 Tax=Bacteria TaxID=2 RepID=A0A3S3K9I4_9HYPH)

HSP 1 Score: 62.0 bits (149), Expect = 3.400e-7
Identity = 58/198 (29.29%), Postives = 81/198 (40.91%), Query Frame = 1 
Query:  115 VYGAATSGDVERLKSALAAGGNPNWYNHSDEGATALHKAAEGGHVGCIEVLLKSGRVTNVAVIDERLLTSHNSPLHLACAIGHLDVVKQLLSKGAPVNSGNSYGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLLHFLVYSPMEDGDSQAVGRKLIEAGVNVDAKDMDGMTPLHVVARGGNATMAAFLLDNG 708
            ++ AA  GDV  + +AL AG   N  + SD   T L+ A  GGH    ++LL+ G   N A     LL     P   A A   +D++  LL  GA  NS ++  N                                   LH  V     D       + L+EAG +V+AK M+G TPLH+    G   +A +LL +G
Sbjct:   24 IHDAAKKGDVAAITAALDAGAGINESDESDVRMTPLYLAVRGGHFAAAKLLLERGADVNAAPTP--LLGPALMP---ALAKRRIDLINLLLDGGADPNSHSNRENA----------------------------------LHLAVTLGCLD-----CVKALVEAGADVNAKTMNGKTPLHLAKSRGQREIADYLLSHG 177
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig721.18454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMW3_ECTSI1.480e-7059.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFX4_9STRA1.210e-3038.43Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A7S3Y456_HETAK7.600e-2032.94Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
B8BY68_THAPS9.220e-1428.29Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1M9J8_NEODS8.800e-927.31Hypothetical protein n=1 Tax=Neobodo designis TaxI... [more]
A0A2L2YGE0_PARTP2.250e-826.18Protein phosphatase 1 regulatory subunit 16A n=1 T... [more]
UPI001FB7D2D31.530e-725.55trichohyalin-like isoform X1 n=4 Tax=Penaeus chine... [more]
A0A166BL33_EXIGL1.600e-742.11Ankyrin n=1 Tax=Exidia glandulosa HHB12029 TaxID=1... [more]
A0A3A3FKW6_9BURK3.050e-726.58Ankyrin repeat domain-containing protein n=1 Tax=N... [more]
A0A3S3K9I4_9HYPH3.400e-729.29C-type cytochrome n=9 Tax=Bacteria TaxID=2 RepID=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig721contigF-serratus_M_contig721:55226..61427 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score231.5
Seed ortholog evalue4.9e-58
Seed eggNOG ortholog2880.D8LMW3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-02_003870.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1055
Cds size840
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig721.18454.1prot_F-serratus_M_contig721.18454.1Fucus serratus malepolypeptideF-serratus_M_contig721 55441..61427 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932207.8152852-UTR-F-serratus_M_contig721:55225..554401622932207.8152852-UTR-F-serratus_M_contig721:55225..55440Fucus serratus maleUTRF-serratus_M_contig721 55226..55440 -
1690964198.8497443-UTR-F-serratus_M_contig721:55225..554401690964198.8497443-UTR-F-serratus_M_contig721:55225..55440Fucus serratus maleUTRF-serratus_M_contig721 55226..55440 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932207.839811-CDS-F-serratus_M_contig721:55440..555741622932207.839811-CDS-F-serratus_M_contig721:55440..55574Fucus serratus maleCDSF-serratus_M_contig721 55441..55574 -
1690964198.8618987-CDS-F-serratus_M_contig721:55440..555741690964198.8618987-CDS-F-serratus_M_contig721:55440..55574Fucus serratus maleCDSF-serratus_M_contig721 55441..55574 -
1622932207.8618376-CDS-F-serratus_M_contig721:56731..568101622932207.8618376-CDS-F-serratus_M_contig721:56731..56810Fucus serratus maleCDSF-serratus_M_contig721 56732..56810 -
1690964198.8775845-CDS-F-serratus_M_contig721:56731..568101690964198.8775845-CDS-F-serratus_M_contig721:56731..56810Fucus serratus maleCDSF-serratus_M_contig721 56732..56810 -
1622932207.878256-CDS-F-serratus_M_contig721:57105..572641622932207.878256-CDS-F-serratus_M_contig721:57105..57264Fucus serratus maleCDSF-serratus_M_contig721 57106..57264 -
1690964198.8929439-CDS-F-serratus_M_contig721:57105..572641690964198.8929439-CDS-F-serratus_M_contig721:57105..57264Fucus serratus maleCDSF-serratus_M_contig721 57106..57264 -
1622932207.8964045-CDS-F-serratus_M_contig721:58366..585411622932207.8964045-CDS-F-serratus_M_contig721:58366..58541Fucus serratus maleCDSF-serratus_M_contig721 58367..58541 -
1690964198.9043977-CDS-F-serratus_M_contig721:58366..585411690964198.9043977-CDS-F-serratus_M_contig721:58366..58541Fucus serratus maleCDSF-serratus_M_contig721 58367..58541 -
1622932207.918921-CDS-F-serratus_M_contig721:59117..592221622932207.918921-CDS-F-serratus_M_contig721:59117..59222Fucus serratus maleCDSF-serratus_M_contig721 59118..59222 -
1690964198.9140635-CDS-F-serratus_M_contig721:59117..592221690964198.9140635-CDS-F-serratus_M_contig721:59117..59222Fucus serratus maleCDSF-serratus_M_contig721 59118..59222 -
1622932207.9426277-CDS-F-serratus_M_contig721:60681..607351622932207.9426277-CDS-F-serratus_M_contig721:60681..60735Fucus serratus maleCDSF-serratus_M_contig721 60682..60735 -
1690964198.9249983-CDS-F-serratus_M_contig721:60681..607351690964198.9249983-CDS-F-serratus_M_contig721:60681..60735Fucus serratus maleCDSF-serratus_M_contig721 60682..60735 -
1622932207.9639275-CDS-F-serratus_M_contig721:61293..614271622932207.9639275-CDS-F-serratus_M_contig721:61293..61427Fucus serratus maleCDSF-serratus_M_contig721 61294..61427 -
1690964198.9332094-CDS-F-serratus_M_contig721:61293..614271690964198.9332094-CDS-F-serratus_M_contig721:61293..61427Fucus serratus maleCDSF-serratus_M_contig721 61294..61427 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig721.18454.1

>prot_F-serratus_M_contig721.18454.1 ID=prot_F-serratus_M_contig721.18454.1|Name=mRNA_F-serratus_M_contig721.18454.1|organism=Fucus serratus male|type=polypeptide|length=280bp
MAGFNRREHAYVAQAFDPSNFPRHKLAESQVPTKESRDVYGAATSGDVER
LKSALAAGGNPNWYNHSDEGATALHKAAEGGHVGCIEVLLKSGRVTNVAV
IDERLLTSHNSPLHLACAIGHLDVVKQLLSKGAPVNSGNSYGNAPIHGAL
IRGHREIVELLLEKGVDARWTNNKGSTLLHFLVYSPMEDGDSQAVGRKLI
EAGVNVDAKDMDGMTPLHVVARGGNATMAAFLLDNGADRTIEDTEGKTAL
RWAQLNTHTAVGLLLTDERVGSRSLQRPP*
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mRNA from alignment at F-serratus_M_contig721:55226..61427-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig721.18454.1 ID=mRNA_F-serratus_M_contig721.18454.1|Name=mRNA_F-serratus_M_contig721.18454.1|organism=Fucus serratus male|type=mRNA|length=6202bp|location=Sequence derived from alignment at F-serratus_M_contig721:55226..61427- (Fucus serratus male)
ATGGCCGGCTTCAATCGACGTGAGCATGCCTACGTGGCACAAGCTTTCGA
CCCTTCTAATTTTCCCCGGCACAAGCTTGCGGAAAGTCAGGTGCCGACAA
AGGAGTCCAGAGATGTCTACGGTGCGGCGACATCGTAAGTGAAGTACAAG
GGAAGTATCATCAGCGGGAAGAGATAGATACTCGTAAAAATATTTGCCTC
GGGTGCTTCTTCCACCCCCCAAAATATGTAATGATGCTTGCACTTGAGAC
GTCGGAGATGAGGTGTGCACGAAAGCGAAGCTTCCCTACTCAAGTCGGAC
GTCCCTTAAAATTTGCCGCGTCAGCGTGGTGTAATCGCGCGTCATTCGTG
CAGACGGCGAGCGGATTAGCTTTATTCATCAATAATTCAATACGCGACTT
GTCAACGTTTTGAAACCTAGTCTGCTACTACTGTACTGTACAGTAGACAA
GCTGAGACAAACTTGACTATATCGCACTTTTTAATAGGTCTAGATAATGA
TTATTCTGACTTGGAGCCCCTCACACTGACTGGCACTCCCCTCCTTTCTT
TCAACTTTTCCTCCTTTCATCCTCTCGGCGTCGACATACTCTACACATCA
TCAATCATATAATATTGCGGGTACTACGACTGTACTGTACTGCTACTACT
ACTGCTGCTGCATTACTTACACGAACAACCCGGTATATTTAGAGGTGATG
TCGAGCGGCTAAAATCAGCACTGGCTGCTGGAGGGAATCCCAACTGGTGA
GTGTAATGTGCACATAGTCAGGGCTGGGTAATAAAATCCTACAACGAGCC
GGGAGCATTTATGCTCGTGGGGGGAGCTGGCTTCACTTACCTGGTGATCA
ACGCCCCTTGAGCACTTCCTCCAAACCAAAGAATGCAGTCACAGAAGGTA
TACAGACAGTAATAACAATAACAAATAACATTTATTAATGTTAAGAGGGT
GTGTTTCACGAAGCTTTCCGAAGAGTCGACGGCTGCAAAACACTCGAACT
CCGATAATAAACATGGAACTTTCGTTTAACGACCGCACCCCGGTGGTCTC
TCGTCTCTCGTTCAACTGGTAGTAACTCAACAACTCAATAAATAATAAAG
CAACAACCTGTACGACCACTACTTCTCTACGTGTGTGTGTACACGTCTAC
ATATAATAATCATCAGGAGTAGAACTAATAGTAGTACCAGGGTATATAAT
AGCCGATCAACAACAATTAATGTTGGATGTACGTGTCATCTATTAATAGT
ATTATTAGTAGTGGGAAGACAACATGCAGCAAGTAGTTCGTGTTTATGTT
ACTATTAATAATGAGGACGTGACTTCAAATGAGTAAGTTCAACCATTTGT
TATCGAGGTGTGTACGAGACTCGAGTGACCTCAACATCAACATTACTTCT
GCCTATCGTGGGGTCGATTTTAAAAAAGCGTCGTAGGCCGGAACAAGGGA
GGGGCGGGGTTTGATCTCTTTGGACACCACGCGAGATGGGCAACGCTGGT
GGCAGCCGGTTGATAACCCTATTATTGCAACAGTACCTACTAAAATAGCA
GCATTGCTGGCCCTCCATCATCGGCGGAAAGTGACATGAAAAACAAGATA
AAACAAAAAAACAGCTGATGATAATGCCCGCCCTGCGGCAGAGAGTTGTA
ACAGAGCGTTACGAGCGCAGTGGCACACATTATATTGTTGCTTTATTGTA
TCGTAACAACCACCTACCAGGTATTAATATTAATAATGATCCAAGGTGGC
ATTGTTAGTACTGCTACGAGTATGTTAGGCCACCATCACCTAGACGCCTA
GGCAAACAAAAACATACCGAGGGTAAGAGAAGCAAGCTCTGACCGGAAAC
AGGACTGACTACCCATACAGGTTGCAGTTGAGTTTCATGGCTCGGACCAC
ACGTAACAAGCGCGGAACAGGCTACAAACCTTCAACTAAATCGATCGAGG
GCAACAAAGGCGTCGTCGTTGTCGTAGGCAGATAACATCCCCCCGCCGTG
ACCCTGGAACGCCAAACATCTCTGCTGGCCAATCAATGATACAGGAGTCC
GGAGTAATACGTTAAGGCTGAAAAATGGAAAACGATGATGTATTCTGTCT
TCATTCAGTGCTTACCTTACCTACTTCCGGGTCAACCGGGTCGATCGATC
GGTCGGTGGGTTTGTGGGCGCGGGGGTGGGGGGCTTGATGGCAACGCATA
ATAAGGTACAATCATTCAGACGAAGGGGCAACAGCCCTCCACAAGGCGGC
TGAGGGCGGGCACGTGGGCTGCATCGAAGTTCTTCTCAAGAGCGGGCGAG
TAACCAACGTGTAGAGCCAACGAGCACCAGTATCATCAGAACCCTTCGGC
GAGCATGACTGATACAAGCAACTTACAAGTAGTCAGCATGAGTTGTTATT
AATAGAGAGAAGAGATGTTCCGATTTTGAAAGCAACGCTAACAAGCCTAA
CGGAAATCTCAAAAACTGCCGAGTATCTTGCCAAGCTGGTCGATGCGCTT
GAAAATGTCACTGAACAGCTGTTTCCAGACTTTTGCCCAATGATTTAGTC
TTCTCTTTCTGTTTTTCTTTTTGTTCTTTCGTGGAGCGTGACGCTCCATT
GCGCCGCTTCCATCTCCTACACTTCGACATCGTCGGAGACCATGCATACG
TCCGTAGTGAGTCACATTGGGTTGAAAAGACTTCGCCTCCTTGAATACTC
GTGCGAATGATTTGAACCCATCGAACGTTAATAATCGCGCACCATATTTA
GAAGTGTCACTTCTGAATCAAAGAATGCCGAGATCGGAGAGAATGTCTGT
CTCGCAAAATATGTGCCCCCACCATGTTCCGTCACGTTTACCGTACCATC
CCATCCCATCCCTGCTGCCGGCTTGATAAAAGACAGCGCTGTGATAGACG
AGCGTCTCTTAACTAGCCACAACTCCCCCCTCCATCTGGCCTGTGCGATC
GGGCACCTCGATGTGGTCAAACAACTCCTATCTAAGGGTGCACCCGTCAA
CTCCGGGAACAGCTATGGGAACGCTCCAATCCACGGGGCGCTCATACGCG
GACACCGAGAGGTATAAATTGTATCGAACCCCTTCTCTTCTTTTGGTTGT
TGGTTGGATAGAAGGGAAACCCACAGACTGACTCAAACTCTCTCCTAGGA
AAGTGGTTCAAAGCCCTTCAGCCCCAAGCTACTCATAGGACTTTCTTATC
AAAGGCATTTTGAAGCGCCAGTGACTGTCAGTCAGTCGTTGAACTCTTGC
TCGAAGGCCGTCGCAGTCTATCACCACGGGGAGGTCGTCACTGTTTTTTC
TTGTGACGCTCTAACTCAAGAATAACAACCACACACGTGCACCCCCCCCC
TCCCCCTACACACTCATCACATCACATGCTCACTACGTATTACATACGTT
GCTGTTGTTTAAAGAAAAATCTTAACGCATCCTAGACCTTCTGATTGATG
TTGTTTCTCACATTCAGCGTATTATTGGTTGCCAACTCGTTTACTACACT
GTTGTTGTTTAAAAACTGTTGGTTGTTTGAAGAAAAATACAGAACAACCT
TCTGAGCATCCCCCAGTCAGGGGGAAGAAATTCAAAACGTTCAGGTCGGC
TCAAAGGCTGCAAATACAAAACCTCTTCATGGCATTTAAACGGGTTCCCC
TATGGAGGTACCGTTGGGTCGTTGTTTCTCACATTCAGCGTCGTATTGGT
TGCCAACCCGAAAAACTACTTTACACGGTGGCCAATCCCGCTGCTCACTC
GTGGTATGTCTTGGTTATATGAGAGGTATTTCGTGACAAAAATAATTGAT
CAGCATTATTACTGATATTCCTCACGTTGGGAGGAGGACCAAAACGATGA
TTATCATAGTAGTTTAGTATCGAGAACTATTAATTATAGCGCACGACAGG
GGTCAGATTGCGCAGTTATGCGCGCGCGTGTCCAATAATAGAGACATACA
TACATACCTTGGCTGGCAGGAGAAGGTGGTGCGGCAAGGCAGAATCAATC
TCACTTGACAGCTCGCGAGATGTAAATAGATAAGGGGCATATATGATCGG
TCGAGGTGTGGGAGCGGAGCTCAGGGGTCGCCAAATTTCTCGCACACTTT
CACGTGGGCCTCTGCTTTGTTCCCATCGACCTGGTTGTCGACTGTTGTCT
TGTAAACAATGAGATTGTGGAGCTCTTGCTGGAGAAAGGAGTGGACGCCA
GGTGGACGAACAACAAGGGCTCGACTCTCCTGCACTTTCTAGTCTACTCC
CCGATGGAGGACGGTGACAGCCAGGCGGTCGGACGGAAGCTGATCGAAGC
CGGCGTCAACGTTGACGCCAAGGTATCGGTTCGGTGGCACACATCGGGAC
GAAATGGTTCGGTTATGGGTACCACGTCTATCATCGTGATTGCTCCCGAG
TGGAGAATGCGCGGCTCGCTCCGGATTCATGTTGCATTCTTCCTCCCTTT
CCTGAACCGCCTCTTGGCTTCCGCAACACACCCCCTTCCGTCCTTGGAGA
AGCCGGTATTATAATCTCGGCTTCTCTCTATGATGTTCAATACAAAAACA
CCGGGCGGGGTAGGGCCCACCCCATGAAGCCAACGGACAGATTCCCGCTG
ACTATTCCGGCAAACAGGATATGGATGGCATGACGCCCTTGCACGTGGTC
GCTCGAGGCGGAAACGCGACGATGGCGGCTTTTCTTCTAGACAACGGTGA
GTCGAGCAAGCTGTACGAGGATTGGGGTTGGCAGCCGAGAGGCGGGGACC
GCCGAAGGGGTTGTTATAGCGACCCGGGGGAAAATTTTTACATAGCTCTA
TATTAGAACATGAGCATCTCCTGCAGGTCAGGTCAGGTAGGTACCTTAGA
CCTGTATTCTCCCCGATAATATTGAAGGGTTTGTTGGCGATCGTCCGTAT
CAACTTGATTTATTTATAAGCTACTTTTGTTTTTTGTATAGAGCAATCAA
TATAGTCTAGATAGGTTCCTGAAGTTACCTTACCCAAGCCTTTGCAAGCC
TTCTTCAACTTGACGCCCAACAAGTTGAAGAATGCCCAACGCGGTAATCA
ATATTGTCTGGTGCCACTTTGTACGCCCCTGCCATCCACCCGTATTCCCG
GGAGTTTGGAAATGGCTCCTTTCACATTCTTCTCGTCGCACACGTTTCTT
CCGCAAATAAAAATGTTCACTATAACTACATACGGTAAGTAATTATACTG
TACTGGTAGCACATTCTCTTGTTTCTCTTGTTTCTTTTGATACCAGTAGC
CTTGAAAAATCAGACTTTAGATTGGCACCGCACCGTGATACACCATAATA
GCTCTACAGTAGTTATAGTATTACAGAATAATTACAGTATTACAGTATTC
AAAACAAAGTGCGTTTTTCCAATTAGAAGCACGTGCGTACTACACCGTAT
ACACAGGCGCGGAGCGTTCCTCCTACGAAATTCGTATACGGTGCCTTCCT
ACTTCTTCCTACTATGGCCTATACACTGATGCACTGATACACTGATACAC
TGATGCATTGATGCACTGATACACTGATACACTGATACACTGATGATACA
CTGATGATGCACAGATACACTGATACACTGATACACTGATGATATCAGAT
ATGGCATGAAAAAGCTATCACGACGTGCTGCGTATACAAGTAATGCAGTA
CCTACGTAATATCAACAAGTGTACAAGCAGTATGTAATATCAACAACTGT
ATACTATCAAGTATAATGAGATACAGTTAGTGCCGCGGGTCGACGACGAC
ACTATAGTCTACTACATACACTAACTACTGTTTGTATAAAAAAAACAGAA
GAACAAATACTATCGGACCGGCGCCTCTTTGAATCCCCATGCGCCGGGTC
CAGGTGCCGACCGAACTATCGAAGACACAGAGGGAAAGACGGCATTGCGT
TGGGCCCAGCTCAACACCCATACGGCTGTCGGCCTTCTTCTGACCGACGA
GAGGGTTGGCTCTCGAAGCCTCCAACGCCCCCCGTAGGAAAAATTGTTAG
TGTAAACACGCTGAGGGTACAGTACTCAGGCTGAAGAAGGACGCTGTTGT
CCTCACTGAAAGTAGGTGAAATCTCGAGGATGACCCACAACATTTTTTTT
ACTTGTATGCTGCGTAATACTTCCCCAGCCTCCTTGGAGGATGAGCTATT
TGTCCTCTTGGTTGCATCGTGCAACATCAGGTCAATGATCACCAACATCA
CC
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Coding sequence (CDS) from alignment at F-serratus_M_contig721:55226..61427-

>mRNA_F-serratus_M_contig721.18454.1 ID=mRNA_F-serratus_M_contig721.18454.1|Name=mRNA_F-serratus_M_contig721.18454.1|organism=Fucus serratus male|type=CDS|length=1680bp|location=Sequence derived from alignment at F-serratus_M_contig721:55226..61427- (Fucus serratus male)
ATGGCCGGCTTCAATCGACGTGAGCATGCCTACGTGGCACAAGCTTTCGA
CCCTTCTAATTTTCCCCGGCACAAGCTTGCGGAAAGTCAGGTGCCGACAA
AGGAGTCCAGAGATGTCTACGGTGCGGCGACATCATGGCCGGCTTCAATC
GACGTGAGCATGCCTACGTGGCACAAGCTTTCGACCCTTCTAATTTTCCC
CGGCACAAGCTTGCGGAAAGTCAGGTGCCGACAAAGGAGTCCAGAGATGT
CTACGGTGCGGCGACATCAGGTGATGTCGAGCGGCTAAAATCAGCACTGG
CTGCTGGAGGGAATCCCAACTGAGGTGATGTCGAGCGGCTAAAATCAGCA
CTGGCTGCTGGAGGGAATCCCAACTGGTACAATCATTCAGACGAAGGGGC
AACAGCCCTCCACAAGGCGGCTGAGGGCGGGCACGTGGGCTGCATCGAAG
TTCTTCTCAAGAGCGGGCGAGTAACCAACGTGTACAATCATTCAGACGAA
GGGGCAACAGCCCTCCACAAGGCGGCTGAGGGCGGGCACGTGGGCTGCAT
CGAAGTTCTTCTCAAGAGCGGGCGAGTAACCAACGTCGCTGTGATAGACG
AGCGTCTCTTAACTAGCCACAACTCCCCCCTCCATCTGGCCTGTGCGATC
GGGCACCTCGATGTGGTCAAACAACTCCTATCTAAGGGTGCACCCGTCAA
CTCCGGGAACAGCTATGGGAACGCTCCAATCCACGGGGCGCTCATACGCG
GACACCGAGAGCGCTGTGATAGACGAGCGTCTCTTAACTAGCCACAACTC
CCCCCTCCATCTGGCCTGTGCGATCGGGCACCTCGATGTGGTCAAACAAC
TCCTATCTAAGGGTGCACCCGTCAACTCCGGGAACAGCTATGGGAACGCT
CCAATCCACGGGGCGCTCATACGCGGACACCGAGAGATTGTGGAGCTCTT
GCTGGAGAAAGGAGTGGACGCCAGGTGGACGAACAACAAGGGCTCGACTC
TCCTGCACTTTCTAGTCTACTCCCCGATGGAGGACGGTGACAGCCAGGCG
GTCGGACGGAAGCTGATCGAAGCCGGCGTCAACGTTGACGCCAAGATTGT
GGAGCTCTTGCTGGAGAAAGGAGTGGACGCCAGGTGGACGAACAACAAGG
GCTCGACTCTCCTGCACTTTCTAGTCTACTCCCCGATGGAGGACGGTGAC
AGCCAGGCGGTCGGACGGAAGCTGATCGAAGCCGGCGTCAACGTTGACGC
CAAGGATATGGATGGCATGACGCCCTTGCACGTGGTCGCTCGAGGCGGAA
ACGCGACGATGGCGGCTTTTCTTCTAGACAACGGATATGGATGGCATGAC
GCCCTTGCACGTGGTCGCTCGAGGCGGAAACGCGACGATGGCGGCTTTTC
TTCTAGACAACGGTGCCGACCGAACTATCGAAGACACAGAGGGAAAGACG
GCATTGCGTTGGGCCCAGCTCAACACCCATACGGCTGTCGGCCTTCTTCT
GACCGACGAGAGGGTTGGCTCTCGAAGCCTCCAACGCCCCCCGTAGGTGC
CGACCGAACTATCGAAGACACAGAGGGAAAGACGGCATTGCGTTGGGCCC
AGCTCAACACCCATACGGCTGTCGGCCTTCTTCTGACCGACGAGAGGGTT
GGCTCTCGAAGCCTCCAACGCCCCCCGTAG
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