mRNA_F-serratus_M_contig720.18438.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig720.18438.1
Unique NamemRNA_F-serratus_M_contig720.18438.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig720.18438.1 vs. uniprot
Match: D7FNI3_ECTSI (Clathrin assembly complex, medium subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI3_ECTSI)

HSP 1 Score: 827 bits (2135), Expect = 2.140e-296
Identity = 393/432 (90.97%), Postives = 419/432 (96.99%), Query Frame = 2
Query:   32 MIQSLFILSKTGEVMIEKHWRGVTPRNVCDFFWDEVNRHDVPEAVPPILQTPKYNLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIQPPTTFARFVNATTGKSNVSDVLPNGTVSSMPWRKADVKHSQNEVYLDIIEEVDAIVGVNGQIVSSEVSGTIQANSRLSGIPDMLLIFQDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQLNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSLKFPPRKGAMVIEEVVINVQFPKVVRTADLHVTSGTCLFDEALKIAKWNLGKLFKDKSATMTGTMSIQGPKPEESPPVQISWKVPMASVSGLAITSLQIFNEKYRPYKGVRTLTRSGKNFQVRTG 1327
            MIQSLFI+SKTGEVMIEKHWRG+TPRNVCDFFWDEVNRHDVPEAVPPILQT K+NLIHVYRDDVFLLATCTEDV+ LGVIEFLHRV++IMGDYFGGNVDE AIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMI+PPTTF R V A TGKSNVSDVLP+GTVS+MPWRKA VK+SQNEVYLDIIEE+DAI+ VNGQIVSSEVSGTIQANSRLSGIPDMLL+FQDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQ+NV PPV+CNPTISYEDDYGSSQGHIH+ VGHRHGSSLKFPPRKG+MV+E+V + VQFPKVVRTADLHV+SGTCLFDEALK+AKWNLGKLFKDKSATMTGT+SIQGPKPEESPPVQ+SWKVPMASVSGLAITSLQ+FNEKYRPYKGVRTLT+SGKNFQVRTG
Sbjct:    1 MIQSLFIMSKTGEVMIEKHWRGITPRNVCDFFWDEVNRHDVPEAVPPILQTSKHNLIHVYRDDVFLLATCTEDVSTLGVIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIRPPTTFVRMVTAATGKSNVSDVLPDGTVSAMPWRKAGVKYSQNEVYLDIIEELDAILNVNGQIVSSEVSGTIQANSRLSGIPDMLLVFQDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNVTPPVYCNPTISYEDDYGSSQGHIHIAVGHRHGSSLKFPPRKGSMVVEDVTVTVQFPKVVRTADLHVSSGTCLFDEALKVAKWNLGKLFKDKSATMTGTLSIQGPKPEESPPVQLSWKVPMASVSGLAITSLQVFNEKYRPYKGVRTLTKSGKNFQVRTG 432          
BLAST of mRNA_F-serratus_M_contig720.18438.1 vs. uniprot
Match: A0A7S2GKZ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GKZ3_9STRA)

HSP 1 Score: 566 bits (1459), Expect = 5.500e-194
Identity = 276/431 (64.04%), Postives = 336/431 (77.96%), Query Frame = 2
Query:   32 MIQSLFILSKTGEVMIEKHWRGVTPRNVCDFFWDEVNRHDVPEAVPPILQTPKYNLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIQPPTTFARFVNATTGKSNVSDVLPNGTVSSMPWRKADVKHSQNEVYLDIIEEVDAIVGVNGQIVSSEVSGTIQANSRLSGIPDMLLIFQDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQLNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSLKFPPRKGAMVIEEVVINVQFPKVVRTADLHVTSGTCLFDEALKIAKWNLGKLFKDKSATMTGTMSIQGPKPEESPPVQISWKVPMASVSGLAITSLQIFNEKYRPYKGVRTLTRSGKNFQVRT 1324
            MIQS+F+++ TGEVM+EKH+RG+TPR VCDFFWDEVN++D  E VPPIL   KY LI VYRDD+F++A+   +V  L VIEFLHR+I I  +YFG +V+E AIKE+FS  YQLLEEMMDNG+PLTTEPNALKAMI+PP+   R   A TGKS +S+ LP+GT+S MPWRKA VK++QNE+Y+DIIEEVDAIV  NGQIVSSEV+G +QANSRLSGIPD+ + F DP VIDDCSFHPCVRY RFE+DRVVSFVPPDG FELMRYRV    + NV  P+FC   ++   +  S  G I + VG +  SSL  PP+KG M+IE+V + + FPK V+T +L    GTCL+DEA K+AKW +GKL   KS  +TGT+ + G K EESPP+Q+ WKVPMASVSG+AI SLQ+ NE+YRPYKGVR  TRSGK FQVRT
Sbjct:    1 MIQSIFVMAHTGEVMLEKHYRGMTPRTVCDFFWDEVNKYDDKEDVPPILFNTKYYLISVYRDDLFIIASVVAEVAPLLVIEFLHRIITIFTEYFG-SVEETAIKENFSTCYQLLEEMMDNGYPLTTEPNALKAMIKPPSVMGRLTAAATGKSGISEELPDGTISMMPWRKAGVKYAQNEIYMDIIEEVDAIVDKNGQIVSSEVTGYVQANSRLSGIPDLTMTFVDPDVIDDCSFHPCVRYNRFERDRVVSFVPPDGQFELMRYRVST--KANVAAPIFCQSQLNLNGETNSGNGRISITVGQKPMSSLIMPPKKGTMLIEDVALTIPFPKGVKTTNLTANVGTCLYDEATKVAKWTIGKLSTSKSPQLTGTLVLHGTKLEESPPIQLKWKVPMASVSGIAIASLQLTNERYRPYKGVRATTRSGK-FQVRT 427          
BLAST of mRNA_F-serratus_M_contig720.18438.1 vs. uniprot
Match: F0YKX1_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKX1_AURAN)

HSP 1 Score: 554 bits (1427), Expect = 3.890e-189
Identity = 266/432 (61.57%), Postives = 343/432 (79.40%), Query Frame = 2
Query:   32 MIQSLFILSKTGEVMIEKHWRGVTPRNVCDFFWDEVNRHDVPEAVPPILQTPKYNLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIQPPTTFARFVNATTGKSNVSDVLPNGTVSSMPWRKADVKHSQNEVYLDIIEEVDAIVGVNGQIVSSEVSGTIQANSRLSGIPDMLLIFQDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQLNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSLKFPPRKGAMVIEEVVINVQFPKVVRTADLHVTSGTCLFDEALKIAKWNLGKLFK--DKSATMTGTMSIQGPKPEESPPVQISWKVPMASVSGLAITSLQIFNEKYRPYKGVRTLTRSGKNFQVR 1321
            MI+SLF+   +GEV+IE+HWRGVTPRNVCDFFWDEVN++D    VPPIL T KY L+ V RDD++++AT  +DV  L VIEFLHRV++I  +YFG   DEG+IK++FS+VYQLLEEM+DNG+PLTTEPNALKAMI+PP+   R     TG+SNVSDVLP+GT+SSMPWRK+ VK++QN++YLDI+EEVDAIV  NGQ+VSSEV+G I ANSRLSGIPD+ L F DP VIDDCSFHPCVRY RFE+DRVVSFVPPDG FELMRYRV  + + NV  P++  P+++  D++ +  G I + +G +  SSL  P RKG+++IE+V +++ FPK V+TA L  T GT L+DEA K+AKW +GKL    ++   +TG+M IQG   EE PP+Q++WKVP+AS+SG+ I +LQ+ NE+YRPYKGVRT+T+SG+ FQVR
Sbjct:    1 MIKSLFVTGSSGEVLIERHWRGVTPRNVCDFFWDEVNKYDHSTEVPPILHTSKYYLVSVSRDDIYVIATLAKDVAPLLVIEFLHRVVDIFVEYFGA-ADEGSIKDNFSMVYQLLEEMLDNGNPLTTEPNALKAMIKPPSVMGRLQAVATGRSNVSDVLPDGTISSMPWRKSGVKYAQNDIYLDIVEEVDAIVDRNGQVVSSEVTGAIMANSRLSGIPDLCLSFVDPEVIDDCSFHPCVRYNRFERDRVVSFVPPDGAFELMRYRV--NTKANVSAPIYVTPSVTMSDEHNAGHGRIQIQIGQKQTSSLVIPNRKGSLLIEDVTLSIPFPKCVKTATLSATLGTVLYDEATKVAKWTVGKLAVTGNRVPQLTGSMVIQGAL-EELPPIQVTWKVPIASISGIQIAALQLTNERYRPYKGVRTITKSGR-FQVR 427          
BLAST of mRNA_F-serratus_M_contig720.18438.1 vs. uniprot
Match: I2CP32_NANGC (AP-3 complex subunit mu n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP32_NANGC)

HSP 1 Score: 531 bits (1367), Expect = 5.100e-180
Identity = 257/435 (59.08%), Postives = 336/435 (77.24%), Query Frame = 2
Query:   32 MIQSLFILSKTGEVMIEKHWRGVTPRNVCDFFWDEVNRHDVPEAVPPILQTPKYNLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIQPPTTFARFVNATTGK-SNVSDVLPNGTVSSMPWRKADVKHSQNEVYLDIIEEVDAIVGVNGQIVSSEVSGTIQANSRLSGIPDMLLIFQDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQLNVIPPVFCNPTISYED---DYGSSQGHIHLNVGHRHGSSLKFPPRKGAMVIEEVVINVQFPKVVRTADLHVTSGTCLFDEALKIAKWNLGKLFKDKSATMTGTMSIQGPKPEESPPVQISWKVPMASVSGLAITSLQIFNEKYRPYKGVRTLTRSGKNFQVRT 1324
            MI SLFIL++ GEV+IEKHWR VTPR VCDFFWDEVN++   E VPP++   KYNLI++YR+D+FL+A+   ++  L VIEFLHR+++I  +YFGG +++ +IK++FS VYQLLEEMMD+G+PLTTEPNALKAMI+PPT   R   A TGK S VS++LP+GTVS+MPWRK+ VK++QNE+YLDI+EE+DAIV  +GQ+VS+EVSG I ANSRLSGIPD+ L+F DP VIDDCSFHPCVRY RFE+DR VSFVPPDGHFELMRYRV     L  +PP++C   I Y     D G S G + L +G +   SL    +  ++  E+V + + FPK VRT  L   +GT L+DEA K+A+W +GK+ ++++  +TGT+ + G +PEESP +Q+ WKVPMASVSGL + SLQ+ NE+YRPYKGVRT+T+SG+ FQVR+
Sbjct:    1 MIHSLFILNQHGEVLIEKHWRSVTPRAVCDFFWDEVNKYPEKEDVPPLIAASKYNLINIYREDLFLVASMLSEIPPLLVIEFLHRILDIFSEYFGG-LEDSSIKDNFSTVYQLLEEMMDHGYPLTTEPNALKAMIRPPTLLTRLEAAATGKASGVSNLLPDGTVSNMPWRKSGVKYNQNEIYLDIVEEMDAIVDCSGQVVSAEVSGFIFANSRLSGIPDLSLLFVDPDVIDDCSFHPCVRYNRFERDRTVSFVPPDGHFELMRYRVTPRQTL--VPPIYCTAQIVYSSAGKDDGVSSGRLTLTLGCKPVHSLILNNKGKSLSFEDVKVTIPFPKAVRTTHLQTNTGTVLYDEASKVARWTVGKMSRERNPQLTGTILLAGGRPEESPSIQVDWKVPMASVSGLTVLSLQLLNERYRPYKGVRTITKSGR-FQVRS 431          
BLAST of mRNA_F-serratus_M_contig720.18438.1 vs. uniprot
Match: A0A835YUG2_9STRA (Mu homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG2_9STRA)

HSP 1 Score: 531 bits (1368), Expect = 8.410e-180
Identity = 271/457 (59.30%), Postives = 344/457 (75.27%), Query Frame = 2
Query:   32 MIQSLFILSKTGEVMIEKHWRGVTPRNVCDFFWDEVNRHDVPEAVPPILQTPKYNLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIQPPTTFARFVNATTGKSN-VSDVLPNGTVSSMPWRKADVKHSQNEVYLDIIEEVDAIVGVNGQIVSSEVSGTIQANSRLSGIPDMLLIFQDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRD---HL--QLNVIPPVFCNPTISYEDD---------------YGSSQGHIHLNVGHRHGSSLKFPPRKGAMVIEEVVINVQFPKVVRTADLHVTSGTCLFDEALKIAKWNLGKLFK----DKSATMTGTMSIQ-GPKPEESPPVQISWKVPMASVSGLAITSLQIFNEKYRPYKGVRTLTRSGKNFQVRT 1324
            MIQSLFI+S  GEV+IEKHWR VTPR+VCD+FWDEV + +  E +PPI+   K  +I VYR D+FL+A   ++   L  IEFLHRV++I+ DY G  VDE +IKESFSLVYQLLEEMMDNGHP+TTEPNALKAMI+PPT   R V A TG+S+ +S+ LP+GT+S+MPWRKA V+++QNE+YLDIIEEVDAIV  NGQ+VSSEV+G+IQA S LSGIPD+LL FQDPS+IDDCSFHPCVRYGRFE+DRVVSFVPPDG FELMRYRV     H+  + N+IPP++CN T+S+ D                       +H+ +G R  +SL+FP RK A ++E+V + V FP+ VRTA+L  T+GT LFDEA K+A+W++GKL       +   M G + +Q G + EESP + ++WKVP+AS+SGL+I SLQ+ NE+Y+PYKGVRTLT+SGK F VRT
Sbjct:    1 MIQSLFIMSNAGEVLIEKHWREVTPRSVCDYFWDEVCKLEDREEIPPIMAVNKGFIISVYRYDMFLIAKVQQETPPLLCIEFLHRVLDILADYLGA-VDETSIKESFSLVYQLLEEMMDNGHPMTTEPNALKAMIKPPTVMGRVVAAATGRSDAISEALPDGTISAMPWRKAGVRYAQNEIYLDIIEEVDAIVAANGQVVSSEVTGSIQAVSHLSGIPDLLLTFQDPSLIDDCSFHPCVRYGRFERDRVVSFVPPDGAFELMRYRVATGAHHILPRGNIIPPLYCNATVSFSDGAXXXXXXXXXXXXXXXXXXXXRVHVGLGTRAPNSLRFPGRKTASMLEDVEVTVPFPRAVRTANLSATAGTVLFDEAAKVARWSVGKLAMGSVGQRPPQMAGALVLQPGARLEESPSIHVAWKVPVASISGLSIASLQLTNERYKPYKGVRTLTKSGK-FTVRT 455          
BLAST of mRNA_F-serratus_M_contig720.18438.1 vs. uniprot
Match: A0A7S2SCM0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCM0_9STRA)

HSP 1 Score: 528 bits (1361), Expect = 2.090e-179
Identity = 256/418 (61.24%), Postives = 325/418 (77.75%), Query Frame = 2
Query:   74 MIEKHWRGVTPRNVCDFFWDEVNRHDVPEAVPPILQTPKYNLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIQPPTTFARFVNATTGKSNVSDVLPNGTVSSMPWRKADVKHSQNEVYLDIIEEVDAIVGVNGQIVSSEVSGTIQANSRLSGIPDMLLIFQDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQLNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSLKFPPRKGAMVIEEVVINVQFPKVVRTADLHVTSGTCLFDEALKIAKWNLGKLFKDKSATMTGTMSIQGP-KPEESPPVQISWKVPMASVSGLAITSLQIFNEKYRPYKGVRTLTRSGKNFQVRT 1324
            M++ HWRG+TPR VCDFFWDEVN++   E VPPIL T KY +I VYRD +F++AT T+++  L  IEFL R+ +I  DYF G  DE +IKE+FS  YQLLEEMMD+G+PLTTEPNALKAMIQPPT   +    T GKS +++ LP+GT+SSMPWRKA VK++QNE+YLDI+EEVDAIV  NGQ+VS+EV+G +QANSRLSGIPD+ L F+DP VIDDCSFHPCVRY RFE+DRVVSFVPPDG FELMRYRV  + + +V  P++C   + YED   SS G +++ VG R   SL  P +KG++V+EEV + + FPKVV+T +L V  G  L+DEA K+AKW +GK+   K+  ++GTM +QG  K EE+PP+Q+ WKVP AS+SG+AI+SLQ+ NEKYRPYKGVRT+ RSGK +QVRT
Sbjct:    1 MMKMHWRGMTPRTVCDFFWDEVNKYPTREEVPPILTTSKYYIISVYRDGLFVVATTTQEMAPLLAIEFLLRIFDIFSDYFDG-ADEVSIKENFSTCYQLLEEMMDHGYPLTTEPNALKAMIQPPTVMGKLAELTMGKSGITEELPDGTISSMPWRKAGVKYAQNEIYLDIVEEVDAIVDRNGQVVSTEVTGVVQANSRLSGIPDLTLTFEDPEVIDDCSFHPCVRYTRFERDRVVSFVPPDGQFELMRYRV--NTKAHVSAPIYCQSQVLYED--ASSYGRVNITVGQRPTGSLIVPAKKGSLVVEEVCLTIPFPKVVKTTNLSVNYGAILYDEATKVAKWTIGKMPTSKTPQLSGTMVLQGQQKLEENPPIQLDWKVPTASISGIAISSLQLTNEKYRPYKGVRTIIRSGK-YQVRT 412          
BLAST of mRNA_F-serratus_M_contig720.18438.1 vs. uniprot
Match: A0A8J2SXB1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXB1_9STRA)

HSP 1 Score: 511 bits (1315), Expect = 4.840e-172
Identity = 253/435 (58.16%), Postives = 325/435 (74.71%), Query Frame = 2
Query:   26 VRMIQSLFILSKTGEVMIEKHWRGVTPRNVCDFFWDEVNRHDVPEA-VPPILQTPKYNLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIQPPTTFARFVNATTGKSNVSDVLPNGTVSSMPWRKADVKHSQNEVYLDIIEEVDAIVGVNGQIVSSEVSGTIQANSRLSGIPDMLLIFQDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQLNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSLKFPPRKGAMVIEEVVINVQFPKVVRTADLHVTSGTCLFDEALKIAKWNLGKLFKD--KSATMTGTMSIQGPKPEESPPVQISWKVPMASVSGLAITSLQIFNEKYRPYKGVRTLTRSGKNFQVR 1321
            V+MI SLF+ S TGEV+IE+HWRGVTPRN+CD  WDE+N  D     + P+L T K+ L+ V+R+D++++A   ++V  L VIE L RV++I  +YFG    EG IK++F+ VYQLLEEM+DNG+PLTTEPNALKAMI PP+   R     TGKSNVSDVLP+GT+SSMPWRK+ VK++QNE+YLDIIEEVDA+V   GQ+VSSEVSG I ANSRLSGIPD+ L F DP VI DCSFHPCVRY RFE+DRVVSFVPPDG FELMRYRV  + + NV  P++  P ++  D + +  G I + +G R  SSL  P RK  M+IE+V +++ FPK V+TA L  T GT L+DEA K+A W +G+L  +  K   ++G+M IQG   E  PP+Q+ WKVP+ASVSG+ I +LQ+ NE+YRPYKGVRT+T+SG+ FQ+R
Sbjct:   11 VQMINSLFVTSATGEVLIERHWRGVTPRNICDLCWDELNPQDKRSGTLSPLLHTSKHYLVSVFREDIYVIAVLAKEVPPLLVIELLQRVVDIFVEYFGA-ASEGLIKDNFASVYQLLEEMLDNGNPLTTEPNALKAMIAPPSVMGRLQAVATGKSNVSDVLPDGTISSMPWRKSGVKYAQNEIYLDIIEEVDAVVDRKGQVVSSEVSGAIVANSRLSGIPDLCLSFLDPEVIKDCSFHPCVRYTRFEQDRVVSFVPPDGTFELMRYRV--NTKTNVTVPIYVTPVVTMSDQHNAGYGRIQIQIGQRQTSSLVTPNRKAPMLIEDVALSIPFPKCVKTATLSATVGTVLYDEATKVASWTIGRLTPNATKVPQLSGSMIIQG-LAEGPPPIQVKWKVPVASVSGIQIAALQLKNERYRPYKGVRTITKSGR-FQIR 440          
BLAST of mRNA_F-serratus_M_contig720.18438.1 vs. uniprot
Match: K3WKR4_GLOUD (MHD domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WKR4_GLOUD)

HSP 1 Score: 494 bits (1272), Expect = 8.280e-166
Identity = 240/434 (55.30%), Postives = 327/434 (75.35%), Query Frame = 2
Query:   32 MIQSLFILSKTGEVMIEKHWRGVTPRNVCDFFWDEVNRHDVPEAVPPILQTPKYNLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIQPPTTFARFVNATTGKSNVSDVLPNGTVSSMPWRKADVKHSQNEVYLDIIEEVDAIVGVNGQIVSSEVSGTIQANSRLSGIPDMLLIFQDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQLNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSLKFPPRKGAMVIEEVVINVQFPKVVRTADLHVTSGTCLFDEALKIAKWNLGKLFKD-KSATMTGTMSIQ--GPKPEESPPVQISWKVPMASVSGLAITSLQIFNEKYRPYKGVRTLTRSGKNFQVRT 1324
            MIQS+FI++ TGEV+IEKHWRG+T RNVCDFF +EVN++   E VPPI+ T KY L+ V+RDD+F+LA  T +++ L VIEFLHRV+ +  DYFG + DE ++K++FS VYQLLEEM+DNG+PLTTEPNALKAM+ PP+T  R     +GKS VS+ LP G +S++PWRK+ VK++QNE+Y DI+EE+DAI+  NGQ++S EV+G I +NSRLSG+PD+ ++F DPSVIDDCSFHPCVRY R+E++RV+SFVPPDG FELM+YRV+      ++PP++C P ISY    G S   + L +G R   +L    +K ++ IE++ ++V FPK VRT D++   G+CLFDE+ K  KW +GKL K   + T+ GT+ +      P+E P V + +KVPMA+VSGL + +L I NEKY+PYKGVRTLT++G+ FQ+RT
Sbjct:    1 MIQSMFIMTTTGEVIIEKHWRGLTSRNVCDFFMEEVNKYKEREDVPPIITTSKYYLVSVFRDDLFVLAVVTNEISPLFVIEFLHRVLAVFRDYFG-SFDENSMKDNFSTVYQLLEEMLDNGYPLTTEPNALKAMVAPPSTANRIAAMVSGKSRVSNTLPEGAISNIPWRKSGVKYTQNEIYFDIVEEIDAIIDGNGQMISCEVNGVIHSNSRLSGVPDLTMVFTDPSVIDDCSFHPCVRYSRYERERVISFVPPDGQFELMQYRVQVQ---QLVPPLYCQPQISYNQHGGGS---VDLQIGTRGMPTLASNSKK-SLQIEDITVDVTFPKSVRTVDVNTEHGSCLFDESTKTLKWTVGKLGKKVTNPTLKGTIILHQNAATPDEKPIVLLGFKVPMATVSGLNVETLLITNEKYKPYKGVRTLTKAGR-FQIRT 425          
BLAST of mRNA_F-serratus_M_contig720.18438.1 vs. uniprot
Match: A0A8K1FGV8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGV8_PYTOL)

HSP 1 Score: 494 bits (1271), Expect = 1.210e-165
Identity = 243/433 (56.12%), Postives = 327/433 (75.52%), Query Frame = 2
Query:   32 MIQSLFILSKTGEVMIEKHWRGVTPRNVCDFFWDEVNRHDVPEAVPPILQTPKYNLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIQPPTTFARFVNATTGKSNVSDVLPNGTVSSMPWRKADVKHSQNEVYLDIIEEVDAIVGVNGQIVSSEVSGTIQANSRLSGIPDMLLIFQDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQLNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSLKFPPRKGAMVIEEVVINVQFPKVVRTADLHVTSGTCLFDEALKIAKWNLGKLFKD-KSATMTGTMSIQGPK--PEESPPVQISWKVPMASVSGLAITSLQIFNEKYRPYKGVRTLTRSGKNFQVR 1321
            MIQS+FI++ TGEV+IEKHWRG+T RNVCDFF +EVN++   E VPP++ T KY L+ V+RDD+FLLA  T ++  L VIEFLHRV+ +  DYFG   DE ++K++FS VYQLLEEM+DNG+PLTTEPNALKAM+ PP+T  R     +GKS VS+ LP+G +SS+PWRK+ VK++QNE+Y DI+EEVDAI+  NGQI+S EVSG I +NSRLSG+PD+ ++F DPSVIDDCSFHPCVRY R+E++RVVSFVPPDG FELM+YRV+       IPPV+C+P +SY +  G+  G + L +  R   +L    +K  + +E++ ++V FPK VRT D++  SGTC+FDE+ K  KWNLGK+ K   S ++ G++ +      P+E P V + +KVPM++VSGL + +L I NEKY+PYKGVRTLT++G+ FQ+R
Sbjct:    1 MIQSMFIITTTGEVIIEKHWRGLTSRNVCDFFMEEVNKYREREDVPPVIVTSKYYLVSVFRDDLFLLAVVTNEIAPLFVIEFLHRVLAVFRDYFG-TFDENSMKDNFSTVYQLLEEMLDNGYPLTTEPNALKAMVAPPSTANRIAAMVSGKSRVSNTLPDGALSSIPWRKSGVKYTQNEIYFDIVEEVDAILDTNGQIISCEVSGVIHSNSRLSGVPDLTMVFTDPSVIDDCSFHPCVRYSRYERERVVSFVPPDGQFELMQYRVQVK---QFIPPVYCHPQVSYSEKNGT--GTLDLQIVTRGMPTLASNSKK-TLQVEDITVDVTFPKSVRTVDVNTESGTCIFDESSKTVKWNLGKMNKKGTSPSLRGSIVLHQNAGIPDEKPIVLVGFKVPMSTVSGLNVETLLITNEKYKPYKGVRTLTKAGR-FQIR 425          
BLAST of mRNA_F-serratus_M_contig720.18438.1 vs. uniprot
Match: A0A6G0WTK8_9STRA (MHD domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WTK8_9STRA)

HSP 1 Score: 493 bits (1268), Expect = 3.200e-165
Identity = 236/434 (54.38%), Postives = 326/434 (75.12%), Query Frame = 2
Query:   32 MIQSLFILSKTGEVMIEKHWRGVTPRNVCDFFWDEVNRHDVPEAVPPILQTPKYNLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIQPPTTFARFVNATTGKSNVSDVLPNGTVSSMPWRKADVKHSQNEVYLDIIEEVDAIVGVNGQIVSSEVSGTIQANSRLSGIPDMLLIFQDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQLN-VIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSLKFPPRKGAMVIEEVVINVQFPKVVRTADLHVTSGTCLFDEALKIAKWNLGKLFKDKSATMTGTMSIQ--GPKPEESPPVQISWKVPMASVSGLAITSLQIFNEKYRPYKGVRTLTRSGKNFQVRT 1324
            MIQSLFI++ TGE++IEKHWRG+T RNVCDFF +EVN++ + E VPP++ T K+  I V+R+ +FLLA  T +++ L VIEFLHRV+ +  DYFG + +E AIK++FS VYQLLEEM+DNG+PLTTEPNALKAM+ PP+T  R     +GKS +SD LP+G +S++PWRKA VK++QNE+Y DI+EE+DAIV  +GQ++S EV+GTI  +SRLSG+PD+ ++F DPSVIDDC+FHPCVRY R+E++RV+SFVPPDG FELM+YRV    Q+N ++PP+FC P + Y +      G + + +G R+  +L    +K     E++ + V FPK VRT D +  +G+CLFD++ K  KWN+GKL K  S T+ GT+ +Q     P+E P VQ+ +KVP  +VSGLA+ +L + NE Y+PYKGVRTLT++G+ FQ+RT
Sbjct:    1 MIQSLFIITSTGEIIIEKHWRGITNRNVCDFFVEEVNKYKLREDVPPVISTAKHYFISVFREGLFLLAVVTNEISPLFVIEFLHRVVAVFRDYFG-SFEESAIKDNFSTVYQLLEEMLDNGYPLTTEPNALKAMVAPPSTVNRIAAIVSGKSRISDQLPDGAISNIPWRKAGVKYTQNEIYFDIVEEIDAIVDSHGQMISCEVNGTINGHSRLSGVPDLTMVFVDPSVIDDCAFHPCVRYARYERERVISFVPPDGQFELMQYRV----QVNQMVPPIFCQPNVKYSE---KGNGTVEITIGTRNMPTLVSNTKKPIQT-EDITVEVTFPKSVRTVDANTDAGSCLFDDSTKTLKWNVGKLKKILSPTLKGTVVLQQNAAIPDEKPIVQLGFKVPFTTVSGLAVETLILTNENYKPYKGVRTLTQAGR-FQIRT 424          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig720.18438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNI3_ECTSI2.140e-29690.97Clathrin assembly complex, medium subunit n=1 Tax=... [more]
A0A7S2GKZ3_9STRA5.500e-19464.04Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YKX1_AURAN3.890e-18961.57MHD domain-containing protein n=1 Tax=Aureococcus ... [more]
I2CP32_NANGC5.100e-18059.08AP-3 complex subunit mu n=1 Tax=Nannochloropsis ga... [more]
A0A835YUG2_9STRA8.410e-18059.30Mu homology domain-containing protein n=1 Tax=Trib... [more]
A0A7S2SCM0_9STRA2.090e-17961.24Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A8J2SXB1_9STRA4.840e-17258.16Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
K3WKR4_GLOUD8.280e-16655.30MHD domain-containing protein n=2 Tax=Pythiaceae T... [more]
A0A8K1FGV8_PYTOL1.210e-16556.12Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0WTK8_9STRA3.200e-16554.38MHD domain-containing protein n=2 Tax=Aphanomyces ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig720contigF-serratus_M_contig720:123593..133029 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score825.5
Seed ortholog evalue1.2e-236
Seed eggNOG ortholog2880.D7FNI3
Preferred nameAP3M2
KEGG koko:K12398,ko:K17969
KEGG Pathwayko04137,ko04139,ko04142,map04137,map04139,map04142
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005768,GO:0005773,GO:0006605,GO:0006622,GO:0006623,GO:0006725,GO:0006726,GO:0006727,GO:0006807,GO:0006810,GO:0006886,GO:0006887,GO:0006897,GO:0006907,GO:0006928,GO:0006950,GO:0006996,GO:0007017,GO:0007018,GO:0007032,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0007154,GO:0007220,GO:0007275,GO:0007568,GO:0008055,GO:0008088,GO:0008089,GO:0008104,GO:0008150,GO:0008152,GO:0008340,GO:0008565,GO:0009058,GO:0009267,GO:0009605,GO:0009606,GO:0009628,GO:0009629,GO:0009630,GO:0009987,GO:0009991,GO:0010256,GO:0010259,GO:0010876,GO:0010970,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0017016,GO:0017137,GO:0018130,GO:0019438,GO:0019538,GO:0019748,GO:0019899,GO:0019915,GO:0030117,GO:0030119,GO:0030123,GO:0030705,GO:0031201,GO:0031267,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032501,GO:0032502,GO:0032940,GO:0032991,GO:0033036,GO:0033060,GO:0033365,GO:0033554,GO:0034613,GO:0042440,GO:0042441,GO:0042594,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043324,GO:0043473,GO:0043474,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0044550,GO:0045184,GO:0046148,GO:0046152,GO:0046158,GO:0046483,GO:0046903,GO:0046907,GO:0047496,GO:0048066,GO:0048069,GO:0048475,GO:0048489,GO:0048490,GO:0048856,GO:0050896,GO:0051020,GO:0051179,GO:0051234,GO:0051235,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0061462,GO:0065007,GO:0065008,GO:0070727,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072384,GO:0072594,GO:0072665,GO:0072666,GO:0080171,GO:0097479,GO:0097480,GO:0097708,GO:0098657,GO:0098796,GO:0098930,GO:0099003,GO:0099111,GO:0099514,GO:0099517,GO:0099518,GO:1901360,GO:1901362,GO:1901564,GO:1901576
EggNOG free text desc.anterograde synaptic vesicle transport
EggNOG OGsKOG2740@1,KOG2740@2759
Ec32 ortholog descriptionClathrin assembly complex, medium subunit
Ec32 orthologEc-01_005340.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029,ko04131
Exons10
Model size2312
Cds size1299
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig720.18438.1prot_F-serratus_M_contig720.18438.1Fucus serratus malepolypeptideF-serratus_M_contig720 124575..132998 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932204.8536046-UTR-F-serratus_M_contig720:123592..1245741622932204.8536046-UTR-F-serratus_M_contig720:123592..124574Fucus serratus maleUTRF-serratus_M_contig720 123593..124574 -
1690964197.4219751-UTR-F-serratus_M_contig720:123592..1245741690964197.4219751-UTR-F-serratus_M_contig720:123592..124574Fucus serratus maleUTRF-serratus_M_contig720 123593..124574 -
1622932205.0511482-UTR-F-serratus_M_contig720:132998..1330291622932205.0511482-UTR-F-serratus_M_contig720:132998..133029Fucus serratus maleUTRF-serratus_M_contig720 132999..133029 -
1690964197.5662992-UTR-F-serratus_M_contig720:132998..1330291690964197.5662992-UTR-F-serratus_M_contig720:132998..133029Fucus serratus maleUTRF-serratus_M_contig720 132999..133029 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932204.8675888-CDS-F-serratus_M_contig720:124574..1247031622932204.8675888-CDS-F-serratus_M_contig720:124574..124703Fucus serratus maleCDSF-serratus_M_contig720 124575..124703 -
1690964197.435895-CDS-F-serratus_M_contig720:124574..1247031690964197.435895-CDS-F-serratus_M_contig720:124574..124703Fucus serratus maleCDSF-serratus_M_contig720 124575..124703 -
1622932204.889893-CDS-F-serratus_M_contig720:125036..1251531622932204.889893-CDS-F-serratus_M_contig720:125036..125153Fucus serratus maleCDSF-serratus_M_contig720 125037..125153 -
1690964197.456299-CDS-F-serratus_M_contig720:125036..1251531690964197.456299-CDS-F-serratus_M_contig720:125036..125153Fucus serratus maleCDSF-serratus_M_contig720 125037..125153 -
1622932204.9098144-CDS-F-serratus_M_contig720:125451..1255411622932204.9098144-CDS-F-serratus_M_contig720:125451..125541Fucus serratus maleCDSF-serratus_M_contig720 125452..125541 -
1690964197.4725037-CDS-F-serratus_M_contig720:125451..1255411690964197.4725037-CDS-F-serratus_M_contig720:125451..125541Fucus serratus maleCDSF-serratus_M_contig720 125452..125541 -
1622932204.9286003-CDS-F-serratus_M_contig720:125996..1261131622932204.9286003-CDS-F-serratus_M_contig720:125996..126113Fucus serratus maleCDSF-serratus_M_contig720 125997..126113 -
1690964197.4877837-CDS-F-serratus_M_contig720:125996..1261131690964197.4877837-CDS-F-serratus_M_contig720:125996..126113Fucus serratus maleCDSF-serratus_M_contig720 125997..126113 -
1622932204.9456096-CDS-F-serratus_M_contig720:126492..1266571622932204.9456096-CDS-F-serratus_M_contig720:126492..126657Fucus serratus maleCDSF-serratus_M_contig720 126493..126657 -
1690964197.4978843-CDS-F-serratus_M_contig720:126492..1266571690964197.4978843-CDS-F-serratus_M_contig720:126492..126657Fucus serratus maleCDSF-serratus_M_contig720 126493..126657 -
1622932204.964334-CDS-F-serratus_M_contig720:126998..1270881622932204.964334-CDS-F-serratus_M_contig720:126998..127088Fucus serratus maleCDSF-serratus_M_contig720 126999..127088 -
1690964197.5080616-CDS-F-serratus_M_contig720:126998..1270881690964197.5080616-CDS-F-serratus_M_contig720:126998..127088Fucus serratus maleCDSF-serratus_M_contig720 126999..127088 -
1622932204.982521-CDS-F-serratus_M_contig720:127287..1274251622932204.982521-CDS-F-serratus_M_contig720:127287..127425Fucus serratus maleCDSF-serratus_M_contig720 127288..127425 -
1690964197.5204802-CDS-F-serratus_M_contig720:127287..1274251690964197.5204802-CDS-F-serratus_M_contig720:127287..127425Fucus serratus maleCDSF-serratus_M_contig720 127288..127425 -
1622932205.0009053-CDS-F-serratus_M_contig720:127809..1280281622932205.0009053-CDS-F-serratus_M_contig720:127809..128028Fucus serratus maleCDSF-serratus_M_contig720 127810..128028 -
1690964197.5298452-CDS-F-serratus_M_contig720:127809..1280281690964197.5298452-CDS-F-serratus_M_contig720:127809..128028Fucus serratus maleCDSF-serratus_M_contig720 127810..128028 -
1622932205.0149813-CDS-F-serratus_M_contig720:128352..1284361622932205.0149813-CDS-F-serratus_M_contig720:128352..128436Fucus serratus maleCDSF-serratus_M_contig720 128353..128436 -
1690964197.5393293-CDS-F-serratus_M_contig720:128352..1284361690964197.5393293-CDS-F-serratus_M_contig720:128352..128436Fucus serratus maleCDSF-serratus_M_contig720 128353..128436 -
1622932205.0313435-CDS-F-serratus_M_contig720:132848..1329981622932205.0313435-CDS-F-serratus_M_contig720:132848..132998Fucus serratus maleCDSF-serratus_M_contig720 132849..132998 -
1690964197.5500088-CDS-F-serratus_M_contig720:132848..1329981690964197.5500088-CDS-F-serratus_M_contig720:132848..132998Fucus serratus maleCDSF-serratus_M_contig720 132849..132998 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig720.18438.1

>prot_F-serratus_M_contig720.18438.1 ID=prot_F-serratus_M_contig720.18438.1|Name=mRNA_F-serratus_M_contig720.18438.1|organism=Fucus serratus male|type=polypeptide|length=433bp
MIQSLFILSKTGEVMIEKHWRGVTPRNVCDFFWDEVNRHDVPEAVPPILQ
TPKYNLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDE
GAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIQPPTTFARFVNATTG
KSNVSDVLPNGTVSSMPWRKADVKHSQNEVYLDIIEEVDAIVGVNGQIVS
SEVSGTIQANSRLSGIPDMLLIFQDPSVIDDCSFHPCVRYGRFEKDRVVS
FVPPDGHFELMRYRVRDHLQLNVIPPVFCNPTISYEDDYGSSQGHIHLNV
GHRHGSSLKFPPRKGAMVIEEVVINVQFPKVVRTADLHVTSGTCLFDEAL
KIAKWNLGKLFKDKSATMTGTMSIQGPKPEESPPVQISWKVPMASVSGLA
ITSLQIFNEKYRPYKGVRTLTRSGKNFQVRTG*
back to top

mRNA from alignment at F-serratus_M_contig720:123593..133029-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig720.18438.1 ID=mRNA_F-serratus_M_contig720.18438.1|Name=mRNA_F-serratus_M_contig720.18438.1|organism=Fucus serratus male|type=mRNA|length=9437bp|location=Sequence derived from alignment at F-serratus_M_contig720:123593..133029- (Fucus serratus male)
GTCCGAGCACGTGGGCGACCCAACTGTAAGGATGATCCAGTCTCTATTCA TTTTGAGTAAGACAGGGGAGGTGATGATCGAGAAGCATTGGAGAGGAGTA ACACCAAGAAATGTGTGCGATTTCTTCTGGGACGAGGTCAATCGACACGA CGTTCCGGAAGCCGTGCCCCCTATCTTGCAGGTACTGTACAATATCATCC ATATGTATCAATGAGGAGGAAGTCGTCGCTTGCCGAGCGCTTGGAGAAGC AATCAAAACCACTGACCAGGCTGACCTTCTGCCACCGACTCCTGAGCTAT GTAGTGCGATGTACCGATGTCATGGACGATAAAATCACGCCTGCTTTTGC GCCGACCAGGAGTAGACTACTAGGAGACCGACGACTCACCTTCCCTTTTG TTCCTGCAACCACAGAGTACAGCAGTAGTTGTACGACGTACAGCACACTG TTTGTGTTTGTACGGAGTACAGTAACTTCCAGACTAATACAAACGACAGG GCAGCACTCCTGGACTATTAATACTGTAGAACAAGACATCTACGAAGCGC CAATGACGGTACCCGTATGAGGCAGGCGAAGCGGAATCACGCGGACATGG AGCCAAAGAAAAAGAAGCTATTAAATAGAGAGAGTGGGATGAGGTTCGAT AGGATCTACCTGGGATCCTGTTTAACAGCTCGGCCTACAGCTGATAACCC TGCGGACCACGAGTTGCGCATACGCCGTTACGCAAGGGGTTAGTCACGTT TTTTGCTGAGAGGATTTGGGAATAACATGCCTACTGTGCCGTGGTGCACT CCACTACCTTACAAGTGCCGATCACTAATCAGTACCGGTATACCGTAAGC ATCGGAGTCTTGGCACACCCCCGAGACTGACTTTCCAGGCTCGATTGCTC CACAACCAAGAGGATGTGAACACCGATCAATACGTCTAAAGAAAGCTCTT GACCGAGATCTTTCGAAAACCGCCCGTTTCGGCATTGACACCCTCTTGGT TGTGGAGCAATCGAGCCTGGAAAGGCAGTCTATGGGGTGAGCCATGACTC TGATACTTACGGTTGTTTGTGCGATGTGGATGTCTAGACCGTACGACGTA TTGGGATTCCCTGAATGTGTCCGTGGCGGGGGCCTTTACCCTAACAGTTC TGCCCACGATAGAGAGACGCAATGATAGTGTGTCAAGGCACCAGCAGAGT GTCGAGGATGAACAGACTGACGCGGGGCGGCAAGGCCGAACCCTTCTCGC GAGACCAAATTCTCAGGCGCGAACGTGGACAGAGAAAAAAACATTTAACC AGGAGCAGGATTGGTAACCTTACCCCGGTTGATCCTTCCTCTGCTATAAG TTATGATTCATAGATACGCTTGCCTCCGATAATAACTGTATCGCACTTGT CCACTAGTGCCAATAGCTCTAGCCTAGACCTAGTGGGTGTGAGAAAAGAA AGGCGAACATTCATTGGTTCAAGGGGATTCCTGAAAAGGCAGCACCCGTT ACTGGAACTACCCTTGAGGACTACTGGTCCTGCGCCGGTGAACTTCAGGC AGTGAACACCATCGGTACGCGGTTGCGTCACCTGATAAACTCGGGACTGA CCCGATAGCGGTTGCTGTATCAGTAAATGGACGCCGCCGCGGAAAGCGAG AGGAACCCCATGAGTAAGCACCAGATCAGCCGGAGGGTGGAGAATGAGCA AGCTGATACGGGGCGGAGCGGCCGAACCTTTGGCCGTTCAAGTAAATGGA TGCCGCCTCCGAAAGCGGGAGGAATCCTGTGAGTAAGCACCAGATTCAGT CTGAGTTTGGAGAATGAGCAGGATGGCGCGAGACGGGACGCCAGAAGCTG TCTCGCGAGAGACCAAATTATCAGGCGCGAACGAGGACAGGAAAGTATTA TTTTCTCTTTCCAGCCGGTCGCCCCGGTAGCTCAGAGTTACCTCGTAACC CTCTGACACGTTGGGTCGTGAGTTCGATCCCGGCAAAACGGGATTTTTCT CACTAAAAAACTCAAAAAATGTCCAACGAGTGGAGAACGATTAATTCGTT AGTACACAAAATTCGACTTCGCGGTTTACGAGGGAAAGGAATGGCTGGAT CCTTCTCGCGAGAAAAATTAAGGCACGCACCGCAGAAGGAAGGTGGATGA AAAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACATCCATT GATGTCCAGAATGGATGGAAAGAAAACAGAAAACACACAACATCGGCAAT ATTACTTCTCTTCCTTAGCATCCATTATTGATAGTTAGATTAACCTGATA GTTATCAGAAAGCAAAACCTTCTCCCCTGCTTCTTCAATCTGTAATTTAT ACTGGTAATTTGCTGGATGGCTAATAATATTAGTATAATAATATGGTTAT GTAACAGTGCTGACACCATCCAATCCTAGACTAAGACCCACTGCAACACA AAATTGAGCTATACCCAGGCTAGCTCATCGTGTCCTCCTCTGTTTCTATC TTTGTTTTGCTTGGTGTCCTTGCATGGGAAGAAAAAACACAAAAAACAGC TGACGAGCAGGATCGGCGACTTACCCGGTTGATCCATACTTGGCTACCAT ACATACATTCACACATGGTGGAACTCTATTGGTCCAAGCATTTCTCGGTG CAGATCGGACAAGTTCAATCCATCTTGTTGGAAATGAAACAAAAATGATC CCACGGCCACGACAGCATACTATTAATACTTTTTTAATATTAAAATGATC GAAAGCACAAATGGGTAGTAAATATTATTAGTAAATAATACCTTATGCTT GGCTGGAGTGTCTGTGTTGTGCTGTGTTGAGGGACCCCATCGTATTCGTC GGACCGTTGTTTTTAACAGTTCGTACAGTGTGTGTGTGTGTGTGTGTTTT CTTCCCATCCATTCTGGACATCAAGTTTGTTGGACGTACCAGCCGGGGTC ACACAGGAGGAAGGTCACACAGGATTTCTCATCCACCTTCCTTCTGCGGT GCGTGCCTTAATTTTTATCGCGAGAAGGATTCAGCCATTCCTTTCCCTCG TCGACCGTGAAGTCGAATTTTATGTACTAACGAATTAATCGTTCTCCACC CGTTGGGCATTTTATTTTTGGTTTTTAGTTTTTAGTGAGAAAAATCCCGT TTGCCGGGATCGAACTCAAGTCCCAACGTGTCAGAAGGTTACGAGGTACC TACTGAGCTACCGGGGCGACCGGCCTACTGCTGTACAACACACGATACAG TAGCACTGTACGACCTGGTACTGTAGAGCTACTGTCGTAGGTCTGTCCAT ACGGTAGTACCCAAGGGACGGCTTGTGTTACTCCTCGTGGTGTGACAATA TACCATGCACCGTATAGTCTGGAACTCTTAGTCCAAAAATACTGTACAAT AACTAGTCTGCTTTCGTTTTGGTGTCCCTACGTGGTGAATAATGTAGTGT ACAGTGTAACGATGGGCTTCTCCCCGGTATGATACTGTTGACCCTATGTG GCTACATTGGGGAACCCTTTTATAATAGTGCCATGTAGAGTTTTTGTTCC TACAGCCAATGTTCCCACCTAAACCTTTTGACCGATCAGAAGGTGAAGGT TTAGATGCGTTCATATTTTTCTTCTAAAATAAATGTATAAAATCACCTCA CATTTTACAAGAAAACAGAATGTACTGTACATACAAGTACTGTAATACTG TTTCATTCCTTAACTTCATAATAAAGGCGTGGCGCTGAATGGCTGCAAGC TTTATTACTGCGAAGTACCATACAGACAGAAATAGCGGTACATGTAGGGA TCGCTATAAAGAAAAATAAACTGTAGGAGCACGTCGGCGATACAGCCATG TAGATGCATGTCCCTTTGGATGTGGATCCAATGACTATCTATGTATGGTC ATGACATATAGCAAGACTATGGATCAACCGGGTAAGGTTGTCAATCCTGC ACGTGGTCAGCTGAACAGGGAAAATGGATATTTCCCTGTCCGCGTTCGCG CCTGAGAATATGGTCTCGCGAGACGGTTCCGGCAGTCTCGTCCCGCGTCA GCCTGCTCATCTCCATACTCAGACTGAATCTGGCGCTTACTTATGGGATT TCTCCCGAGTTCCGCGGCGGCGTCCATTTATTTATTTAAAAACCGCCATA CGCCATCGGGTCAGTCCTGAGTTTATCGGGTCGCGCAATTGCGTACCGAT GACGTTCTCTACCGAGATTCCGCCGGCACAGTGCCTGTAAACCTCAAGGT AGTTCCGAACGAGTGCTGCTGCCTTGGCAGGTCACCTTGGACCGATTAAT ATCCGCCTCTCTTTCCCATACCCACTATTGATATGAAGTGGGCATGTTGA AAGTACCGGCGATATATGACTATATGACTTTTTTTTAATTTTGTCCGCTC TCGAGGTCCGTGTCGATCGATGAAACATGCAAGAAAAAGTGCATCATACA GTATCGACAAAAACGCATCATCGCTGGTTTCCGTTCTTTTAAGTACGTCG TATCGTTTCAAGAGCGCCAACAACTAACGAACCGACGCGACTTACACCAT CCTTCTTCTCGATCCCTTTTCCCAAACACGCCGCCGCTGACAGACCCCAA AGTACAATCTCATCCACGTGTATCGAGACGACGTCTTCTTGCTGGCGACG TGCACGGAAGACGTGAACGCTCTTGGGGTGAGACACAGCTCGAAAGCAGA AAACGCAGGGCAGAGTCAAAAGCATCTCCAATCGGCATCTTGGTCGCGAC GACGATATTATCCACGTTTTCGCGCCGCATCGATTTAATCCGATCACGGC TCGAGATCGGCGAATGGAGAGCATCAACGCTTCTTGCTCACACGGCGTAG CCCGGCGTTTACCATGCGGTGGAAACCCGTGCAGAGGCATGTGAGTTCCA GGAACGCCTCTCTTCGCTCACCCAAACGTTTTCCCTTTCTTATGTGTGTC ATTGTCGTGCCTATGCCGCCGGTGTTGTCGGGGGGTGTTAACTGCCGAAA GGTTATTGAGTTTCTCCACCGCGTGATCGAGATCATGGGGGATTACTTCG GGGGGAATGTGGACGAAGGCGCCATCAAGGAGTCCTTCAGTCTCGTGTAC CAGCTCTTGGAGGAAATGATGGACAACGGACACCCTTTGACCACGGAGCC GAACGCGCTGAAGGCGATGATACAGCCTCCGACGACGTTCGCCCGATTCG TCAATGCCACTACTGGCAAGGTACGCCCGTTAGTAACGGTGGAAATATTT ATGCGTAGCGGTTCGAGTGAGTGCGCTCTCGGGTGGCCTTTTCGAGGCGT TCGATTGTCCTGGGCAACCGATCGGCTGCTGTGCGCCCGATTGCTCCAGG AGCTTCTCCCCGGTGTGGCTGTTTTTTTTTGTATCCTGTTGTTGATTTTG CAAGTGCTGAGTCTCATGCCCGGCAGACTCTCAATTTTTCAATTGAAACC GTTCATTGACCCAGGGTAGAGGTACAATGCTGTAGATGCTATGGTGCAAC ATGCAAGGGGAACCACAGTCGTTGTTCCATTCGAAAACATTTGCCTCCCT AAACGTCGGATACGTTGCTTCGCCTCGTCCCTCTCGTTTTCCGCGCGTCT GAAGAGCAACGTATCCGACGTGCTACCCAACGGCACAGTGTCATCCATGC CATGGAGAAAGGCGGATGTCAAACACTCCCAGAACGAGGTATACCTGGAT ATCATCGAAGAGGTGGACGCCATCGTAGGGGTCAACGGACAGGTGCGAGC ATCGCGGACGCTACCTGCGGAGCGATGGGATGGTCGCGAGGAAAACATAT TATATAGTATATATATATATTAATGTATGAAAAAATATAAGGAAACGTAT CGGCCTTAGACGCAACTTCTTCGTTGATTCCCCCTGACGGCCACGTCTGA TTTATCCTCGCTCTGTCTCGCCCATGCTCGCTTGTGTACAGATTGTTTCC TCAGAGGTCTCGGGTACGATACAGGCCAACTCTCGGCTGAGCGGTATCCC CGACATGCTCTTGATTTTCCAGGACCCCTCGGTGAGGAACGTAATACTGT ACGCTCCATGAACCCGAAGCGAAAAAAACTGCGCACTGGCATGGAAGGTA GCACCAGCTGCGATTCTTGGTCTCTTGACAGCAGAATGAGAAGCATTGCA TTCTCTCGTTGGGACACTCATCAGGATATCAGTGACTATATCAGTGGCTA TGGCAATACTATCACGCTGAAACTGTATGGGAGGTCTATTAATAGCGCAG TGAAGGCTTTTGGCCGAACATTCAGTCGCCTCAAAAAATCCCCCCCCCCC CCTATTTCCCACTTATTTCCTCCTGTTCCAATCCTTGGTCTCTTTTGGCT GTTGTTGCGGTGTGATGGGCAGGTGATCGACGACTGCTCGTTCCACCCGT GTGTCAGGTACGGTCGTTTCGAGAAGGACCGGGTGGTGAGCTTTGTGCCC CCGGACGGGCACTTCGAGCTCATGCGATATCGCGTTCGAGATCACCTGCA GTTGAACGTAATACCTCCGGTATTCTGCAATCCGACGGTGAGACGCGCCG TCGCCGCCGCCGCCGCCAGATGGGTCCCGAGGTGGACAGGAAGGCGTAAC AAGAGGGGTAGCCTTGGTTTGGGGTATCGTTGTGGGGTTGTTCGTGAAAA AACGTCTTTGGTGCGTGAGAGACCTTCGTGCACTCACTCGCGTTGAGCAA GAGCATTGCTATTTCGTTATTTCCTTTTTTTTTGTGACGCATCTGGAGCC GCACCGTGTCCTGTTGCGATTCCTTCGGACTGTTTTGGGAGCCGCTCCGA CCCCCCTCCCCTCCCCAGAATTTTATGGATGTCGGAGCGTTGTCGTTAGC CGCCCACCCTCATTGTGTACTACCCGCTATCGCGGTCGGCCCCCTGCATC TATGAAACGATGAAAGATATCCTACGAGGACGACTACGGCTCCAGCCAGG GCCACATCCACCTGAACGTGGGGCACAGGCACGGCTCTTCGCTCAAGTTT CCTCCGCGAAAAGGCGCGATGGTCATCGAGGAGGTGAGTCATGGGGCATG TTGAATTGGTTTGCGTTGACAAGGGGGTGAGCTTAAAGAGCTATTGGATC GGTGGGCACATCACGCCTAGCCATGACAGTCTGTGGACGTTGATGCGACT TCGCGTGTTCTTCGTTTGCTTGGAAGTGTGTAGTTGGAAAATTCTTTGCA CAAGGTAATGGGGCCACGCACGTATGTGTTGGAGTCCCGCGTCGCATCCT GATAGGTTTGCAACGCCTTGTGGTCGTATGGAAACCCTCCGAGGTTTGCA CTGAAATACGACGTAGCGCTGAAGTTCACCGCCGGCCGCGATCCCACAAG ACGCCATAGACTTTTGTCGACGAGTGAGCGCATACGCATGCTGCCGTCCG ACGTCTTGTCGCGCGCAACACAACTCTTCCTCCGCTGGTTCGTGCCTTGC GGCCTCGCGATGTTTGATCGAAACCCGCTCCTGCGCAGGTGGTGATCAAC GTGCAGTTCCCCAAGGTCGTGAGAACAGCAGACTTGCACGTCACTTCCGG GACCTGCCTCTTCGACGAGGCGCTTAAGGTTGCTATGTTTTACACGCGGT GTCTTAATGAGCTTGCGTGTGCGGTGGTTTCTTGCCCCCGCCCACCGACC CACCCTCCCGTGCGCGTGAAAAAATATACTGGCATCCGCGTATACTTCCA ATAGTACTTTCGGGTCGCGCGACTTTTTTATCTATGTAATTAGTAGGTAC CAAAAAAACACATTTTTTGGTCAGGTGGTCTGGGTGAGCTACGAACATTT GAGCGGTTATTTATCTCATTTTTCACTCTTCTCTTACCCCCCCAAACGTC CTCTTATTCTTGCGTTGCGAAACAAGATTGCCAAGTGGAACCTTGGCAAG TTGTTCAAGGACAAGTCTGCCACGATGACGGGGACCATGAGCATCCAGGG ACCCAAGCCGGAGGAGAGCCCGCCCGTGCAAATATCGTGGAAGGTGCTGC CTGCTTGCTGGTCTAACCATGCGTGGCCGAGGTGTACGCGCGAGTACCTC TACCCTGAGTTTTTGATCGTATCCTTTTCCGTGCGAGCTCTGCTGCGCTT TCTGTCCGCTGTTGGGGCCTTCCGTAGCACCGAGTATCAACGTCTTGTTG TGAGAGCAAACAAAAACTGTTGCGCCTTCTATGCGATCGATCGGTGCATT TCTTACAATTGTCTTTTCAGAGAGAGAGATATTCATATAAACTTCGAAGT AAATATATACTAAATATGTTACTGTGCGTTATTTATAGAATGTTGCGTGT TTTTTTACTCCCCGCCTCGTCTCCAGGTACCCATGGCTTCGGTGTCGGGG CTAGCGATCACGTCGCTGCAGATATTCAACGAGAAGTATCGGCCGTACAA GGGCGTGCGAACGTTGACCAGGTCGGGAAAAAACTTCCAAGTGCGGACGG GCTGAAGGAAGAGAGACGGAGATACCTCACACAACGATTGTGACTTGCTG TCTGTAGCTGAATTCCAGACAATCGCTCGAGGAAAACAAGAGAAAAATGC CTCAACAGGGGAGGCTCAAGCCGTACCCAACTTTTCGAAACTCCGCGTAT TGCGATTCCATTCTTCCGGGCTTGAACCATGCGCCGTCCACACGCGACAA GCCTAAGGCAAGACATAGACCGATTGGTATATGTTCTGACTGATGCCACC CTCCGGATCGGAATCCTCGCTTTTGCCTAAACAGTGGTTCCGTAGATTGA ACGGTCAAATACATCCCTTAGTTATTGATAGTTGCCTAGCTCGGCCTATC CCGCACCCTGTCTGTAGTAAATAGTACCTGGTAGTTAGCAATGACCAGTG CTGCCGGTTTGCAATTTTGGGCAGGCTTGCATAGTATGGGGGGAAGTTTA AAAAAAATAAAAAAACATGGTACTTGGCTTTTACCCCTGAACAGCGGCGG TAGTTGCGTACTGGAGCTACTAGACAGCCGGCCGGACCGTGGAGCCACGG AGACTTCACAGGACCCCAGCTAAGAATCAAATTTGCTTTATGTGTCTTTG TTGTTAGTTACTGTTGGGTAATGAGTCATTTTGCCCACCTCCTCGCGACC TGTACACCGCTTTGGTACTCGGGAGTTAGACCACACCCTACTCTGGCACC ACGTGCGGTCGTCCAACCCTCTCTATCGGAGGAGACCATTAACGTAGAAG ACACTACCAGTATGAACTATGTTCGACGTGGAGGTTGAGTCGAAAGCCTT TTCCGTCGTAGGCCCGTACCGTGCTTGCCAACACAAAATGTGTGTGCGTG TAACCATCGCGGGTACTAGAAATCACCCTTCAAAACCAAGACAAGATATC TTTTGAAAAAGGAGCCCTGTGTATGTAGTGATCAAGTACCAAATCTGGTC TAGAGTAAATTCAACCACTATGACTTTTTCAGGGAGG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig720:123593..133029-

>mRNA_F-serratus_M_contig720.18438.1 ID=mRNA_F-serratus_M_contig720.18438.1|Name=mRNA_F-serratus_M_contig720.18438.1|organism=Fucus serratus male|type=CDS|length=2598bp|location=Sequence derived from alignment at F-serratus_M_contig720:123593..133029- (Fucus serratus male)
ATGATCCAGTCTCTATTCATTTTGAGTAAGACAGGGGAGGTGATGATCGA
GAAGCATTGGAGAGGAGTAACACCAAGAAATGTGTGCGATTTCTTCTGGG
ACGAGGTCAATCGACACGACGTTCCGGAAGCCGTGCCCCCTATCTTGCAG
ATGATCCAGTCTCTATTCATTTTGAGTAAGACAGGGGAGGTGATGATCGA
GAAGCATTGGAGAGGAGTAACACCAAGAAATGTGTGCGATTTCTTCTGGG
ACGAGGTCAATCGACACGACGTTCCGGAAGCCGTGCCCCCTATCTTGCAG
ACCCCAAAGTACAATCTCATCCACGTGTATCGAGACGACGTCTTCTTGCT
GGCGACGTGCACGGAAGACGTGAACGCTCTTGGGACCCCAAAGTACAATC
TCATCCACGTGTATCGAGACGACGTCTTCTTGCTGGCGACGTGCACGGAA
GACGTGAACGCTCTTGGGGTTATTGAGTTTCTCCACCGCGTGATCGAGAT
CATGGGGGATTACTTCGGGGGGAATGTGGACGAAGGCGCCATCAAGGAGT
CCTTCAGTCTCGTGTACCAGCTCTTGGAGGAAATGATGGACAACGGACAC
CCTTTGACCACGGAGCCGAACGCGCTGAAGGCGATGATACAGCCTCCGAC
GACGTTCGCCCGATTCGTCAATGCCACTACTGGCAAGGTTATTGAGTTTC
TCCACCGCGTGATCGAGATCATGGGGGATTACTTCGGGGGGAATGTGGAC
GAAGGCGCCATCAAGGAGTCCTTCAGTCTCGTGTACCAGCTCTTGGAGGA
AATGATGGACAACGGACACCCTTTGACCACGGAGCCGAACGCGCTGAAGG
CGATGATACAGCCTCCGACGACGTTCGCCCGATTCGTCAATGCCACTACT
GGCAAGAGCAACGTATCCGACGTGCTACCCAACGGCACAGTGTCATCCAT
GCCATGGAGAAAGGCGGATGTCAAACACTCCCAGAACGAGGTATACCTGG
ATATCATCGAAGAGGTGGACGCCATCGTAGGGGTCAACGGACAGAGCAAC
GTATCCGACGTGCTACCCAACGGCACAGTGTCATCCATGCCATGGAGAAA
GGCGGATGTCAAACACTCCCAGAACGAGGTATACCTGGATATCATCGAAG
AGGTGGACGCCATCGTAGGGGTCAACGGACAGATTGTTTCCTCAGAGGTC
TCGGGTACGATACAGGCCAACTCTCGGCTGAGCGGTATCCCCGACATGCT
CTTGATTTTCCAGGACCCCTCGATTGTTTCCTCAGAGGTCTCGGGTACGA
TACAGGCCAACTCTCGGCTGAGCGGTATCCCCGACATGCTCTTGATTTTC
CAGGACCCCTCGGTGATCGACGACTGCTCGTTCCACCCGTGTGTCAGGTA
CGGTCGTTTCGAGAAGGACCGGGTGGTGAGCTTTGTGCCCCCGGACGGGC
ACTTCGAGCTCATGCGATATCGCGTTCGAGATCACCTGCAGTTGAACGTA
ATACCTCCGGTATTCTGCAATCCGACGGTGATCGACGACTGCTCGTTCCA
CCCGTGTGTCAGGTACGGTCGTTTCGAGAAGGACCGGGTGGTGAGCTTTG
TGCCCCCGGACGGGCACTTCGAGCTCATGCGATATCGCGTTCGAGATCAC
CTGCAGTTGAACGTAATACCTCCGGTATTCTGCAATCCGACGATATCCTA
CGAGGACGACTACGGCTCCAGCCAGGGCCACATCCACCTGAACGTGGGGC
ACAGGCACGGCTCTTCGCTCAAGTTTCCTCCGCGAAAAGGCGCGATGGTC
ATCGAGGAGATATCCTACGAGGACGACTACGGCTCCAGCCAGGGCCACAT
CCACCTGAACGTGGGGCACAGGCACGGCTCTTCGCTCAAGTTTCCTCCGC
GAAAAGGCGCGATGGTCATCGAGGAGGTGGTGATCAACGTGCAGTTCCCC
AAGGTCGTGAGAACAGCAGACTTGCACGTCACTTCCGGGACCTGCCTCTT
CGACGAGGCGCTTAAGGTGGTGATCAACGTGCAGTTCCCCAAGGTCGTGA
GAACAGCAGACTTGCACGTCACTTCCGGGACCTGCCTCTTCGACGAGGCG
CTTAAGATTGCCAAGTGGAACCTTGGCAAGTTGTTCAAGGACAAGTCTGC
CACGATGACGGGGACCATGAGCATCCAGGGACCCAAGCCGGAGGAGAGCC
CGCCCGTGCAAATATCGTGGAAGATTGCCAAGTGGAACCTTGGCAAGTTG
TTCAAGGACAAGTCTGCCACGATGACGGGGACCATGAGCATCCAGGGACC
CAAGCCGGAGGAGAGCCCGCCCGTGCAAATATCGTGGAAGGTACCCATGG
CTTCGGTGTCGGGGCTAGCGATCACGTCGCTGCAGATATTCAACGAGAAG
TATCGGCCGTACAAGGGCGTGCGAACGTTGACCAGGTCGGGAAAAAACTT
CCAAGTGCGGACGGGCTGAGTACCCATGGCTTCGGTGTCGGGGCTAGCGA
TCACGTCGCTGCAGATATTCAACGAGAAGTATCGGCCGTACAAGGGCGTG
CGAACGTTGACCAGGTCGGGAAAAAACTTCCAAGTGCGGACGGGCTGA
back to top