mRNA_F-serratus_M_contig72.18414.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig72.18414.1 vs. uniprot
Match: A0A6H5L6L3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6L3_9PHAE) HSP 1 Score: 151 bits (381), Expect = 6.330e-36 Identity = 94/232 (40.52%), Postives = 134/232 (57.76%), Query Frame = 1
Query: 1 WCPRAAVAAACETEPRLKRVMRAFEARHPDATIIYLALAGSRLYGTDTPESDLDVRGLYIPSAPRPPTCDTTKMPRDKRGRKGS-------KNDVGSGTTPAKGHAQGRRPKKLTAHA----DDEFPLEEAFWFSTSDSGSANTVEDVDLEMVSLDRFFVQLLRAEIAGLETLFSMLVPEAIIISHPLA-----------VPLLRGQRRRMVSSNTSSWVGFARNHLARFRK 630
WCPR A A+ACE P+L R F+ +HP ATIIYLA +GSRLYGT+T +SD+D++G++IP + ++K R+ + K G T G A+ R ++ A E FW+STS+ S NTV+DVD+E++SL RFF QL+R EI G+ETL SMLV + +IS P VP++ +RR MVSS +SW+GF +H+ ++R+
Sbjct: 277 WCPRVARASACEEVPQLTEAFREFDEKHPGATIIYLAHSGSRLYGTNTAKSDVDLKGIFIPD-----------VQKEKEARRAAAQVKAVAKAQNMGGDTAVPGDAKEARMPSSSSPALSPKGSGKGKEITFWYSTSNCDSRNTVDDVDVEIISLGRFFGQLIRGEIGGVETLHSMLVRDVELISDPEVYVPKYILRKQIVPIVVRERRWMVSSRLASWMGFILSHIHKYRR 497
BLAST of mRNA_F-serratus_M_contig72.18414.1 vs. uniprot
Match: D7G3H5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H5_ECTSI) HSP 1 Score: 125 bits (314), Expect = 1.990e-27 Identity = 124/395 (31.39%), Postives = 176/395 (44.56%), Query Frame = 1
Query: 103 YLALAGSRLYGTDTPESDLDVRGLYIPSAPRPPTCDTTKMPRDKRGRKGSKNDVGSGTTPAKGHAQGRRPKKLTAHA----DDEFPLEEAFWFSTSDSGSANTVEDVDLEMVSLDRFFVQLLRAEIAGLETLFSMLVPEAIIISHPLAVPLLRGQRRRMVS-----------SNTSS--------------------WVGFARNH--------LARFRKNHHAGRQIETEGVPRSDSSSR-GEGMEDERALVDVLGETAEGEGEREG---GGRND--------------------EKVRGGKLLSQARRSVIEAQELLLTGKITFPLAPARVAEIRRLKECQAHNVLQKQSRSIAKSLGELINRAGLSALPPAPDRSTLKTLRDEIMRMHGGRDR 1086
YLA +GSRLYGT+T +SD+D++G++IP + + + + ++ D+G G T G A+ R ++ A E FW+STS+ S NTV+DVDLE++SL RFF QL+R EI G+ETL SMLV + +IS P A + + VS S SS WV + R + + + E PR SR G G + R G G R G GG ++ GKLL ARR V+EA+ELL G+++FPL P V E+RRLKE ++ K+ SI +L A S LP L+ +++E+MR+H R R
Sbjct: 225 YLAHSGSRLYGTNTAKSDVDLKGIFIPDVQKEE--EARRAASQVKAVAKAQQDMG-GDTAVPGDAKEARVPSSSSPALSPKGSGKGKEITFWYSTSNCDSRNTVDDVDLEIISLGRFFGQLIRGEIGGVETLHSMLVRDVELISDPEASTTAAEMQNKRVSAEEPAGEAGDPSRVSSRGGGGEGAGQKSKAVDTAPAWVAVGDKEPPVRKLGVIGRKKAPTRVVKDVAPEEAPRLGVMSRPGTGDVESRGAASSQGARRLGVLSRGGVKMGGEXXXXXXXXXXXXXXXXXXKETARTLKRGKLLMHARRGVMEAEELLTAGRLSFPLKPRYVEELRRLKEL---DMGPKKLSSIQAQAKQLSAVAATSGLPAQVSMEKLRAVQEEVMRVHDQRRR 613
BLAST of mRNA_F-serratus_M_contig72.18414.1 vs. uniprot
Match: A0A6S6RXM5_9PROT (Thioredoxin, phage-associated n=1 Tax=uncultured Sulfurovum sp. TaxID=269237 RepID=A0A6S6RXM5_9PROT) HSP 1 Score: 62.4 bits (150), Expect = 5.050e-7 Identity = 42/184 (22.83%), Postives = 84/184 (45.65%), Query Frame = 1
Query: 49 LKRVMRAFEARHPDATIIYLALAGSRLYGTDTPESDLDVRGLYIPSAPRPPTCDTTKMPRDKRGRKGSKNDVGSGTTPAKGHAQGRRPKKLTAHADDEFPLEEAFWFSTSDSGSANTVEDVDLEMVSLDRFFVQLLRAEIAGLETLFSMLVPEAIIISHPLAVPLLRGQRRRMVSSNTSSWVGF 600
+K++++ FE + ++Y+ + GS+LYGTD P SD D +G++IP+ KNDV K+ H + F++++ + N+ +D+DL++ S+ +FF L + E ++ LFSM + + + ++ ++ + N S+VG+
Sbjct: 3 IKKLIQNFE-EEQNCQVVYITMYGSKLYGTDNPNSDTDYKGIFIPN----------------------KNDV--------------LLKRDIEHYN----------FNSNEDNTKNSKDDIDLQLFSIYKFFTLLKKGETGAMDILFSMFRADTQVFNDEKFTSIIMENYKKFYNRNLHSFVGY 139
BLAST of mRNA_F-serratus_M_contig72.18414.1 vs. uniprot
Match: A0A6M0L1X5_9PROT (Uncharacterized protein n=1 Tax=Sulfurovum sp. bin170 TaxID=2695268 RepID=A0A6M0L1X5_9PROT) HSP 1 Score: 62.4 bits (150), Expect = 5.050e-7 Identity = 44/184 (23.91%), Postives = 84/184 (45.65%), Query Frame = 1
Query: 49 LKRVMRAFEARHPDATIIYLALAGSRLYGTDTPESDLDVRGLYIPSAPRPPTCDTTKMPRDKRGRKGSKNDVGSGTTPAKGHAQGRRPKKLTAHADDEFPLEEAFWFSTSDSGSANTVEDVDLEMVSLDRFFVQLLRAEIAGLETLFSMLVPEAIIISHPLAVPLLRGQRRRMVSSNTSSWVGF 600
+K++++ FE + + ++Y+ GS+LYGTD P SD D +G++IP+ KNDV KK H F F+++D + N+ +D+DL++ S+ +FF L + E ++ LFSM + + + ++ ++ + N S++G+
Sbjct: 3 IKKLIKNFE-QEQNCKVVYVTKYGSKLYGTDNPNSDTDYKGIFIPN----------------------KNDV--------------LLKKDLEH----------FNFNSNDENTKNSKDDIDLQLFSVYKFFNLLKKGETGAMDILFSMFREDTQVYNDKEFTSMMMESYKKFYNRNLHSFIGY 139
BLAST of mRNA_F-serratus_M_contig72.18414.1 vs. uniprot
Match: A0A7T5QY83_9CAUD (Thioredoxin n=2 Tax=unclassified Ishigurovirus TaxID=2852450 RepID=A0A7T5QY83_9CAUD) HSP 1 Score: 61.6 bits (148), Expect = 8.210e-7 Identity = 46/176 (26.14%), Postives = 74/176 (42.05%), Query Frame = 1
Query: 97 IIYLALAGSRLYGTDTPESDLDVRGLYIPSAPRPPTCDTTKMPRDKRGRKGSKNDVGSGTTPAKGHAQGRRPKKLTAHADDEFPLEEAFWFSTSDSGSANTVEDVDLEMVSLDRFFVQLLRAEIAGLETLFSMLVPEAIIISHPLAVPLLRGQRRRMVSSNTSSWVGFARNHLARF 624
+IY + GSRLYGTDTPESD D +G++IPS P+++ +E + T G ANT +D+D E SL +F + E A ++ L + PE +I+S LR QR ++ +++G+ R +++
Sbjct: 4 LIYECVFGSRLYGTDTPESDTDYKGVFIPS-----------------------------------------PQQII------MGTKEVYHRDTGAKGKANTSDDIDREYFSLKKFIQMAAKGETAAIDMLHA---PENMILSCDPVFQHLREQRTSFYTTKMQAYLGYVRKQASKY 129
BLAST of mRNA_F-serratus_M_contig72.18414.1 vs. uniprot
Match: A0A1W1CI52_9ZZZZ (Thioredoxin, phage-associated n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A1W1CI52_9ZZZZ) HSP 1 Score: 60.5 bits (145), Expect = 2.310e-6 Identity = 44/184 (23.91%), Postives = 82/184 (44.57%), Query Frame = 1
Query: 49 LKRVMRAFEARHPDATIIYLALAGSRLYGTDTPESDLDVRGLYIPSAPRPPTCDTTKMPRDKRGRKGSKNDVGSGTTPAKGHAQGRRPKKLTAHADDEFPLEEAFWFSTSDSGSANTVEDVDLEMVSLDRFFVQLLRAEIAGLETLFSMLVPEAIIISHPLAVPLLRGQRRRMVSSNTSSWVGF 600
+K ++ FE + ++Y+ GS+LYGTD P SD D +G++IP+ KNDV K+ H F F++++ + N+ +D+DL++ S+ +FF L + E ++ LFSM + I + +++ ++ + N S+VG+
Sbjct: 8 IKNLIEKFENEY-SCKVVYITKYGSKLYGTDNPNSDTDYKGIFIPN----------------------KNDV--------------LLKRDLEH----------FNFNSNEKNTKNSKDDIDLQLFSIYKFFNLLKKGETGAMDILFSMFREDTQIYNDQEFTSIIKENYKKFYNRNLHSFVGY 144
BLAST of mRNA_F-serratus_M_contig72.18414.1 vs. uniprot
Match: A0A6S6TKD3_9PROT (Thioredoxin, phage-associated n=1 Tax=uncultured Sulfurovum sp. TaxID=269237 RepID=A0A6S6TKD3_9PROT) HSP 1 Score: 59.7 bits (143), Expect = 3.770e-6 Identity = 75/328 (22.87%), Postives = 132/328 (40.24%), Query Frame = 1
Query: 49 LKRVMRAFEARHPDATIIYLALAGSRLYGTDTPESDLDVRGLYIPSAPRPPTCDTTKMPRDKRGRKGSKNDVGSGTTPAKGHAQGRRPKKLTAHADDEFPLEEAFWFSTSDSGSANTVEDVDLEMVSLDRFFVQLLRAEIAGLETLFSMLVPEAIIISHPLAVPLLRGQRRRMVSSNTSSWVGFAR-------------NHLARFRKNHHAGRQIETEGVPRSDS-----------------------SSRGEGMEDERALVDVLGETAEG------------EGEREGGGRNDEKVRGG--KLLSQARRSVIEAQELLLTGKITFPL 882
+K +++ FE + ++Y+ + GS+LYGTD P SD D +G++IP KNDV K+ H + F++++ + N+ +D+DL++ S+ +FF L + E ++ LFSM + I + ++ ++ + N S++G+ N L F K +A ++ +G + +S +SRG G+ + V+VLG+ G E E + G R +G K LS A R + E +EL+ I+FPL
Sbjct: 3 IKNLIKNFE-EEQNCQVVYITMYGSKLYGTDNPNSDTDYKGIFIPY----------------------KNDV--------------LLKRDLEHYN----------FNSNEKNTRNSKDDIDLQLFSIYKFFSLLKKGETGAMDILFSMFREDTQIHNDTSFTSIIMENYKKFYNRNLHSFIGYCVGQSKVYNVRGERFNELHSFVKYFNA--LVKEQGANKLESMFPQIDELFANNLYKYINYVLADTSRGSGVPKQGKYVEVLGKRFLGTVTVAYFSEKITEMEEQFGNRARASAKGVDFKALSHAVRVIDEVEELIDHAFISFPL 281
BLAST of mRNA_F-serratus_M_contig72.18414.1 vs. uniprot
Match: A0A6S6SMB3_9PROT (Thioredoxin, phage-associated n=3 Tax=uncultured Sulfurovum sp. TaxID=269237 RepID=A0A6S6SMB3_9PROT) HSP 1 Score: 58.9 bits (141), Expect = 6.780e-6 Identity = 72/326 (22.09%), Postives = 131/326 (40.18%), Query Frame = 1
Query: 49 LKRVMRAFEARHPDATIIYLALAGSRLYGTDTPESDLDVRGLYIPSAPRPPTCDTTKMPRDKRGRKGSKNDVGSGTTPAKGHAQGRRPKKLTAHADDEFPLEEAFWFSTSDSGSANTVEDVDLEMVSLDRFFVQLLRAEIAGLETLFSMLVPEAIIISHPLAVPLLRGQRRRMVSSNTSSWVGFARNHLA-------RFRKNH----HAGRQIETEGVPRSDS-----------------------SSRGEGMEDERALVDVLGETAEG------------EGEREGGGRNDEKVRGG--KLLSQARRSVIEAQELLLTGKITFPL 882
+K +++ FE + + ++Y+ + GS+LYGTD P SD D +G++IP+ + + RD E + F++++ + N+ +D+DL++ S+ +FF L + E ++ LFSM + + + ++ ++ + N S+VG+ RF + H + ++ +G + +S +SRG G+ E V+VLG+ G E E + G R +G K LS A R + E +EL+ ITFPL
Sbjct: 3 IKNLIQNFEQEY-NCQVVYITMYGSKLYGTDNPNSDTDYKGIFIPNR------EDVLLKRDL----------------------------------------EHYNFNSNEDNTRNSKDDIDLQLFSIYKFFSLLKKGETGAMDILFSMFRADTQVYNDEKFSSIIMENYKKFYNRNLHSFVGYCVGQSKVYNVRGERFNELHSFVKYFNDLVKEQGSEKLESMFPEIDKLFLEHNYKYVKYIMADTSRGSGVPKEGKYVEVLGKRFLGTVTIAYFSEKITEMEEQFGNRARASAKGVDFKALSHAVRVIDEVEELIDHDFITFPL 281
BLAST of mRNA_F-serratus_M_contig72.18414.1 vs. uniprot
Match: A0A4D6BGE4_9CAUD (Uncharacterized protein n=1 Tax=Aeromonas phage Asfd_1 TaxID=2562462 RepID=A0A4D6BGE4_9CAUD) HSP 1 Score: 58.2 bits (139), Expect = 1.170e-5 Identity = 47/176 (26.70%), Postives = 78/176 (44.32%), Query Frame = 1
Query: 97 IIYLALAGSRLYGTDTPESDLDVRGLYIPSAPRPPTCDTTKMPRDKRGRKGSKNDVGSGTTPAKGHAQGRRPKKLTAHADDEFPLEEAFWFSTSDSGSANTVEDVDLEMVSLDRFFVQLLRAEIAGLETLFSMLVPEAIIISHPLAVPLLRGQRRRMVSSNTSSWVGFARNHLARF 624
+I+ L GS LYG +TPESDLD++G+YIP PRD +GS +++++ +T D S N+ +D+D+EM SL +F R E L+ L S P+ II+ ++ R ++N +S++G+ A++
Sbjct: 4 VIFEGLHGSHLYGLNTPESDLDMKGIYIPD------------PRDML--------MGS--------------------------VKKSYSVTTGDDRSKNSKDDIDIEMFSLYQFIQDAARGETYALDMLHS---PKDKIITDSSVWQYIQQNRASFYTTNMTSYMGYVMKQAAKY 130
BLAST of mRNA_F-serratus_M_contig72.18414.1 vs. uniprot
Match: E5EPR5_9CAUD (Uncharacterized protein nrdC.11 n=1 Tax=Acinetobacter phage Acj9 TaxID=760939 RepID=E5EPR5_9CAUD) HSP 1 Score: 57.4 bits (137), Expect = 2.110e-5 Identity = 46/178 (25.84%), Postives = 77/178 (43.26%), Query Frame = 1
Query: 97 IIYLALAGSRLYGTDTPESDLDVRGLYIPSAPRPPTCDTTKMPRDKRGRKGSKNDVGSGTTPAKGHAQGRRPKKLTAHADDEFPLEEAFWFSTSDSGSANTVEDVDLEMVSLDRFFVQLLRAEIAGLETLFSMLVPEAIIISHPLAVP--LLRGQRRRMVSSNTSSWVGFARNHLARF 624
+I A GS LYGT+TP+SDLD++GLYIPS+ RD +G G T + +TSD NT +D+DLEM SL F + E L+ + + P ++I+ + P + R + +++ +++G+ + A++
Sbjct: 5 LIMKAYFGSTLYGTNTPQSDLDIKGLYIPSS------------RDIL--------LGKGAT--------------------------HYTHNTSDKNQKNTSDDIDLEMFSLQSFIGLATKGETIALDMIHT---PSSMIVDYDFMEPWDFIYQNRSKFYTTDMKAYLGYVKRQAAKY 133 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig72.18414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig72.18414.1 >prot_F-serratus_M_contig72.18414.1 ID=prot_F-serratus_M_contig72.18414.1|Name=mRNA_F-serratus_M_contig72.18414.1|organism=Fucus serratus male|type=polypeptide|length=357bp MRAFEARHPDATIIYLALAGSRLYGTDTPESDLDVRGLYIPSAPRPPTCDback to top mRNA from alignment at F-serratus_M_contig72:565688..574322+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig72.18414.1 ID=mRNA_F-serratus_M_contig72.18414.1|Name=mRNA_F-serratus_M_contig72.18414.1|organism=Fucus serratus male|type=mRNA|length=8635bp|location=Sequence derived from alignment at F-serratus_M_contig72:565688..574322+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig72:565688..574322+ >mRNA_F-serratus_M_contig72.18414.1 ID=mRNA_F-serratus_M_contig72.18414.1|Name=mRNA_F-serratus_M_contig72.18414.1|organism=Fucus serratus male|type=CDS|length=2142bp|location=Sequence derived from alignment at F-serratus_M_contig72:565688..574322+ (Fucus serratus male)back to top |