mRNA_F-serratus_M_contig719.18390.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig719.18390.1
Unique NamemRNA_F-serratus_M_contig719.18390.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig719.18390.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig719contigF-serratus_M_contig719:87791..88554 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size766
Cds size762
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932196.9829943-CDS-F-serratus_M_contig719:87790..885521622932196.9829943-CDS-F-serratus_M_contig719:87790..88552Fucus serratus maleCDSF-serratus_M_contig719 87791..88552 +
1690964194.1379297-CDS-F-serratus_M_contig719:87790..885521690964194.1379297-CDS-F-serratus_M_contig719:87790..88552Fucus serratus maleCDSF-serratus_M_contig719 87791..88552 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig719.18390.1prot_F-serratus_M_contig719.18390.1Fucus serratus malepolypeptideF-serratus_M_contig719 87791..88552 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig719.18390.1

>prot_F-serratus_M_contig719.18390.1 ID=prot_F-serratus_M_contig719.18390.1|Name=mRNA_F-serratus_M_contig719.18390.1|organism=Fucus serratus male|type=polypeptide|length=254bp
KREKKWETWVRPAPRAKSSFFQNSPKNECQEMPRTRDSSSAPITEQPSQA
KNPSPLEEGQTGRCSPSCPRVFDAPDVDGDDEKGTRRSIARRNVLSNVDE
LITPRLHQPDPNNHLGEPRRTTARTSWSRPETRTVWTPTNALVRSSATSN
TQEKPASERPVSLPLLNTNRAARAPFDGTLARPDERGALPQDPESFPLGP
RPLSSTVRRNARKPLSRQFHSAIVEIRSRDRLRGSLQFSESTPSPSRRPA
RSLS
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mRNA from alignment at F-serratus_M_contig719:87791..88554+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig719.18390.1 ID=mRNA_F-serratus_M_contig719.18390.1|Name=mRNA_F-serratus_M_contig719.18390.1|organism=Fucus serratus male|type=mRNA|length=764bp|location=Sequence derived from alignment at F-serratus_M_contig719:87791..88554+ (Fucus serratus male)
AAGCGCGAGAAGAAGTGGGAAACCTGGGTGCGGCCAGCGCCGAGAGCCAA
GAGCAGCTTCTTCCAAAACTCACCGAAGAACGAATGCCAGGAAATGCCGA
GGACGAGGGACTCAAGCAGCGCGCCAATCACAGAGCAGCCTTCACAAGCA
AAGAACCCCTCCCCGTTGGAAGAGGGGCAAACGGGGCGTTGTTCGCCCAG
CTGCCCCAGAGTATTCGACGCCCCCGACGTCGACGGGGATGACGAAAAAG
GAACTCGCCGATCTATCGCTCGCAGGAACGTTTTATCGAATGTTGACGAG
CTCATCACGCCACGCCTGCACCAGCCCGATCCCAACAACCATCTCGGTGA
ACCGAGACGAACAACAGCGCGTACTTCTTGGAGTAGACCGGAAACTCGTA
CCGTTTGGACACCGACGAACGCTCTAGTGCGTAGTAGTGCTACTAGCAAC
ACCCAGGAAAAACCAGCAAGCGAGCGACCGGTGTCTCTTCCCTTGTTGAA
CACTAACAGAGCTGCCCGTGCTCCCTTCGACGGTACCCTCGCTCGCCCTG
ACGAGCGGGGAGCGTTGCCACAAGACCCTGAGTCCTTCCCGCTAGGACCG
CGTCCTTTGTCGTCGACGGTCCGGAGAAATGCTCGGAAACCTTTGTCTAG
ACAGTTCCACAGTGCGATAGTGGAGATTCGCTCGAGGGACAGGTTGAGAG
GGTCATTGCAATTCTCAGAATCCACGCCTTCGCCCTCTCGGAGGCCAGCG
CGATCGCTGTCGCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig719:87791..88554+

>mRNA_F-serratus_M_contig719.18390.1 ID=mRNA_F-serratus_M_contig719.18390.1|Name=mRNA_F-serratus_M_contig719.18390.1|organism=Fucus serratus male|type=CDS|length=1524bp|location=Sequence derived from alignment at F-serratus_M_contig719:87791..88554+ (Fucus serratus male)
AAGCGCGAGAAGAAGTGGGAAACCTGGGTGCGGCCAGCGCCGAGAGCCAA
GAGCAGCTTCTTCCAAAACTCACCGAAGAACGAATGCCAGGAAATGCCGA
GGACGAGGGACTCAAGCAGCGCGCCAATCACAGAGCAGCCTTCACAAGCA
AAGAACCCCTCCCCGTTGGAAGAGGGGCAAACGGGGCGTTGTTCGCCCAG
CTGCCCCAGAGTATTCGACGCCCCCGACGTCGACGGGGATGACGAAAAAG
GAACTCGCCGATCTATCGCTCGCAGGAACGTTTTATCGAATGTTGACGAG
CTCATCACGCCACGCCTGCACCAGCCCGATCCCAACAACCATCTCGGTGA
ACCGAGACGAACAACAGCGCGTACTTCTTGGAGTAGACCGGAAACTCGTA
CCGTTTGGACACCGACGAACGCTCTAGTGCGTAGTAGTGCTACTAGCAAC
ACCCAGGAAAAACCAGCAAGCGAGCGACCGGTGTCTCTTCCCTTGTTGAA
CACTAACAGAGCTGCCCGTGCTCCCTTCGACGGTACCCTCGCTCGCCCTG
ACGAGCGGGGAGCGTTGCCACAAGACCCTGAGTCCTTCCCGCTAGGACCG
CGTCCTTTGTCGTCGACGGTCCGGAGAAATGCTCGGAAACCTTTGTCTAG
ACAGTTCCACAGTGCGATAGTGGAGATTCGCTCGAGGGACAGGTTGAGAG
GGTCATTGCAATTCTCAGAATCCACGCCTTCGCCCTCTCGGAGGCCAGCG
CGATCGCTGTCGAAGCGCGAGAAGAAGTGGGAAACCTGGGTGCGGCCAGC
GCCGAGAGCCAAGAGCAGCTTCTTCCAAAACTCACCGAAGAACGAATGCC
AGGAAATGCCGAGGACGAGGGACTCAAGCAGCGCGCCAATCACAGAGCAG
CCTTCACAAGCAAAGAACCCCTCCCCGTTGGAAGAGGGGCAAACGGGGCG
TTGTTCGCCCAGCTGCCCCAGAGTATTCGACGCCCCCGACGTCGACGGGG
ATGACGAAAAAGGAACTCGCCGATCTATCGCTCGCAGGAACGTTTTATCG
AATGTTGACGAGCTCATCACGCCACGCCTGCACCAGCCCGATCCCAACAA
CCATCTCGGTGAACCGAGACGAACAACAGCGCGTACTTCTTGGAGTAGAC
CGGAAACTCGTACCGTTTGGACACCGACGAACGCTCTAGTGCGTAGTAGT
GCTACTAGCAACACCCAGGAAAAACCAGCAAGCGAGCGACCGGTGTCTCT
TCCCTTGTTGAACACTAACAGAGCTGCCCGTGCTCCCTTCGACGGTACCC
TCGCTCGCCCTGACGAGCGGGGAGCGTTGCCACAAGACCCTGAGTCCTTC
CCGCTAGGACCGCGTCCTTTGTCGTCGACGGTCCGGAGAAATGCTCGGAA
ACCTTTGTCTAGACAGTTCCACAGTGCGATAGTGGAGATTCGCTCGAGGG
ACAGGTTGAGAGGGTCATTGCAATTCTCAGAATCCACGCCTTCGCCCTCT
CGGAGGCCAGCGCGATCGCTGTCG
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