mRNA_F-serratus_M_contig718.18384.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig718.18384.1 vs. uniprot
Match: D8LD53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD53_ECTSI) HSP 1 Score: 150 bits (378), Expect = 3.200e-40 Identity = 74/105 (70.48%), Postives = 84/105 (80.00%), Query Frame = 2
Query: 311 ARDENLRRFTSAWARRIKGAEKAELRLTTSMSTRGKRKAESIGDTHWIRCQSCGKWRSLLRSMDPSVYVGPVLQFYCLMNTWHESLASCSAPQENHYTVANLFPP 625
A+D NLRRF S WARRIK AEKA+ +L SMSTRGKRKA S W+RCQ+CGKWR+LLR MD S+++G QFYCLMNTW+ESLASCSAPQEN YTV LFPP
Sbjct: 154 AKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPS--QAQWVRCQNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQENQYTVDALFPP 256
BLAST of mRNA_F-serratus_M_contig718.18384.1 vs. uniprot
Match: A0A6H5K0G2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G2_9PHAE) HSP 1 Score: 150 bits (379), Expect = 2.510e-39 Identity = 74/105 (70.48%), Postives = 84/105 (80.00%), Query Frame = 2
Query: 311 ARDENLRRFTSAWARRIKGAEKAELRLTTSMSTRGKRKAESIGDTHWIRCQSCGKWRSLLRSMDPSVYVGPVLQFYCLMNTWHESLASCSAPQENHYTVANLFPP 625
A+D NLRRF S WARRIK AEKA+ +L SMSTRGKRKA S W+RCQ+CGKWR+LLR MD S+++G QFYCLMNTW+ESLASCSAPQEN YTV LFPP
Sbjct: 340 AKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPS--QAQWVRCQNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQENQYTVEALFPP 442
BLAST of mRNA_F-serratus_M_contig718.18384.1 vs. uniprot
Match: A0A7S2B7X4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7X4_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 5.390e-17 Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 2
Query: 317 DENLRRFTSAWARRIKGAEKAELRLTTSMSTRGKRKAESIGDTHWIRC--QSCGKWRSLLRSMDPSVYVGPVLQFYCLMNTWHESLASCSAPQE 592
DE L+ W RR++ + AE+RL TS STRGK++ + + +I+C +CGKWR+L RS+D +YC+MNTW E+LASCSAPQE
Sbjct: 51 DERLKAHLRLWVRRLQCQDTAEVRLPTSSSTRGKKRP--LHEQEYIQCCDPNCGKWRALHRSLDSKTLAERAGAWYCVMNTWDEALASCSAPQE 142
BLAST of mRNA_F-serratus_M_contig718.18384.1 vs. uniprot
Match: A0A1Z5JR34_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JR34_FISSO) HSP 1 Score: 84.0 bits (206), Expect = 3.030e-15 Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = 2
Query: 311 ARDENLRRFTSAWARRIKGAEKAELRLTTSMSTRGKRKAESIGDTH-WIRC--QSCGKWRSLLRSMDPSVYVGPVLQFYCLMNTWHESLASCSAPQEN 595
A D RR W RR++ E E R ++TR K++ S D + WIRC Q CGKWR+LL+SMD Y G ++YC+MNTW E +ASC+APQEN
Sbjct: 280 AADARTRRHFRVWVRRLQTNEAYEARQP--LATRQKKRTLSSKDAYEWIRCCNQKCGKWRALLKSMDAKQYEG---EWYCVMNTWDEKMASCAAPQEN 372
BLAST of mRNA_F-serratus_M_contig718.18384.1 vs. uniprot
Match: A0A7S1C0T6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0T6_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 5.300e-15 Identity = 48/104 (46.15%), Postives = 64/104 (61.54%), Query Frame = 2
Query: 308 EARDEN-LRRFTSAWARRIKGAEKAELRLTTSMSTRGKRKAESIGDTH---WIRC--QSCGKWRSLLRSMDPSVYVGPVLQ--FYCLMNTWHESLASCSAPQEN 595
E+ +EN R+ W RR+KG E E ++ T TRGK+K+ +IG W+RC SCGKWR++LR MD S + +YC++NTW E ASCSAPQEN
Sbjct: 220 ESAEENRTRKHLRLWVRRLKGYEAYEAKMPTM--TRGKKKSVTIGSKEPYEWVRCCNPSCGKWRAILRFMDASDIMESTRDKDWYCVLNTWDEKTASCSAPQEN 321
BLAST of mRNA_F-serratus_M_contig718.18384.1 vs. uniprot
Match: A0A7R9WS73_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WS73_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.700e-13 Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 2
Query: 311 ARDENLRRFTSAWARRIKGAEKAELRLTTSMSTRGKRKAESIGDTH---WIRC--QSCGKWRSLLRSMDPSVYVGPVL---QFYCLMNTWHESLASCSAPQEN 595
A D R+ W RR++ E E R T TRGK++ + WIRC SCGKWR++LR+MD V ++YC+MNTW E +ASC+APQEN
Sbjct: 21 AADARTRKHLRVWVRRLQSNEAYEARQPTL--TRGKKRQVTTNAKEPYEWIRCCNPSCGKWRTILRTMDAKSNVMDRTNDGEWYCVMNTWDEKIASCAAPQEN 121
BLAST of mRNA_F-serratus_M_contig718.18384.1 vs. uniprot
Match: A0A7S1YBM6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YBM6_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 4.690e-12 Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 2
Query: 311 ARDENLRRFTSAWARRIKGAEKAELRLTTSMSTRGKRKAESIGDT---HWIRC--QSCGKWRSLLRSMDPSVYVGPVL---QFYCLMNTWHESLASCSAPQEN 595
A D R+ W RR++ E E R T TRGK+++ + W+RC SCGKWR+LLR MD +V ++YC+MNTW E +ASC+APQEN
Sbjct: 336 AADARTRKHLRVWVRRLESQETFEGRQPTM--TRGKKRSTATTSKDPYEWVRCCNPSCGKWRALLRFMDAKQHVLERARNGEWYCVMNTWDEKMASCAAPQEN 436
BLAST of mRNA_F-serratus_M_contig718.18384.1 vs. uniprot
Match: A0A7R9YG09_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG09_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 9.350e-12 Identity = 49/128 (38.28%), Postives = 66/128 (51.56%), Query Frame = 2
Query: 308 EARDENLRRFTSAWARRIKGAEKAELRL---TTSMSTRGK-------------RKAESIGDTH-----WIRCQS--CGKWRSLLRSMDPSVYVGPVLQFYCLMNTWHESLASCSAPQENHYTVANLFP 622
EA++ L+ + AW R++ A+KAE L +T T G +K S G WIRC S CGKWRSL +++D +V +YC+MNTW SLASCSAP+E T+A P
Sbjct: 109 EAKERRLQMYVQAWHSRLEFADKAERMLPFHSTGNGTSGXXXXXXXXXXXXXXKKHRSSGAASEATCDWIRCCSIGCGKWRSLPKNLDTKAFVERRTAWYCVMNTWDPSLASCSAPEE---TLARYVP 233
BLAST of mRNA_F-serratus_M_contig718.18384.1 vs. uniprot
Match: A0A7S3DU87_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DU87_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-10 Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 2
Query: 311 ARDENLRRFTSAWARRIKGAEKAELRLTTSMSTRGKRKAE-SIGDTH-WIRC--QSCGKWRSLLRSMDPSVYV---------GPVLQFYCLMNTWHESLASCSAPQEN 595
A D R+ W RR++ E E R T TRGK++A ++ D + W+RC SCGKWR++LR M+ V ++YC+MNTW E +ASC+APQEN
Sbjct: 444 AADAKTRKHLRVWVRRLQCQEAYESRQPTL--TRGKKRAAGTMKDPYEWVRCCNPSCGKWRAVLRCMEAKTAVLDRKNPHSCAREQEWYCVMNTWDEKMASCAAPQEN 549
BLAST of mRNA_F-serratus_M_contig718.18384.1 vs. uniprot
Match: A0A836CEE3_9STRA (CW-type zinc finger-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEE3_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 8.200e-8 Identity = 33/95 (34.74%), Postives = 49/95 (51.58%), Query Frame = 2
Query: 308 EARDENLRRFTSAWARRIKGAEKAELRLTTSMSTRGKRKAESIGDTHWIRCQSCGKWRSLLRSMDPSVYVGPVLQFYCLMNTWHESLASCSAPQE 592
E R+ LR F +WARR+ E A R + S G W++C +C KWR + + + +++C+ NT+ ES+ASCSAPQE
Sbjct: 72 ETREATLRTFCGSWARRLALEEHASARNSAQES------GGRAGGMMWVQCSACSKWRYIWCNATTAA----AERWFCVQNTYDESMASCSAPQE 156 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig718.18384.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig718.18384.1 >prot_F-serratus_M_contig718.18384.1 ID=prot_F-serratus_M_contig718.18384.1|Name=mRNA_F-serratus_M_contig718.18384.1|organism=Fucus serratus male|type=polypeptide|length=229bp MNKYDPIRARCRAPQEDTASAHHDEDEEQDQSRRRGSRKADRRQGVDDDDback to top mRNA from alignment at F-serratus_M_contig718:388518..392227+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig718.18384.1 ID=mRNA_F-serratus_M_contig718.18384.1|Name=mRNA_F-serratus_M_contig718.18384.1|organism=Fucus serratus male|type=mRNA|length=3710bp|location=Sequence derived from alignment at F-serratus_M_contig718:388518..392227+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig718:388518..392227+ >mRNA_F-serratus_M_contig718.18384.1 ID=mRNA_F-serratus_M_contig718.18384.1|Name=mRNA_F-serratus_M_contig718.18384.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig718:388518..392227+ (Fucus serratus male)back to top |