mRNA_F-serratus_M_contig718.18378.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig718.18378.1 vs. uniprot
Match: A0A835YPP0_9STRA (Myosin I, high molecular weight-Acanthamoeba sp n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP0_9STRA) HSP 1 Score: 206 bits (525), Expect = 3.550e-58 Identity = 99/154 (64.29%), Postives = 122/154 (79.22%), Query Frame = 2
Query: 113 MATFFESGTWVWIPDEDEVVLPAKAKRAFRLGDRATVVLENGSTRVLSGRESAYCSLCDPQSMDPKVENLTVLDDLNENSLLNILRTRFRRDMIYSNIGTILVSVNPFKPLPLYTPQQMERYKEGPRGKPPHVFAVGHRAYYDMLSERKPQARV 574
MA FFE+G+W+WIPD EVVLPAK F G+ V+++ G R L+ ESA C+L D Q+++P V+NLT LDDLNENSLLNILR R+ + IYSNIG+ILVSVNPFK LPLYTPQQ++ YKEGPRGKPPHVFAVGH AYY+M++ERK Q+ +
Sbjct: 1 MANFFEAGSWIWIPDSTEVVLPAKVVNTFYKGEPGKVLVD-GKPRSLAPAESAECTLADQQTLNPDVDNLTSLDDLNENSLLNILRERYNLNRIYSNIGSILVSVNPFKALPLYTPQQIDMYKEGPRGKPPHVFAVGHNAYYEMINERKNQSII 153
BLAST of mRNA_F-serratus_M_contig718.18378.1 vs. uniprot
Match: D7FVH2_ECTSI (Myosin I, high molecular weight-Acanthamoeba sp n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH2_ECTSI) HSP 1 Score: 184 bits (468), Expect = 1.610e-50 Identity = 96/154 (62.34%), Postives = 103/154 (66.88%), Query Frame = 2
Query: 113 MATFFESGTWVWIPDEDEVVLPAKAKRAFRLGDRATVVLENGSTRVLSGRESAYCSLCDPQSMDPKVENLTVLDDLNENSLLNILRTRFRRDMIYSNIGTILVSVNPFKPLPLYTPQQMERYKEGPRGKPPHVFAVGHRAYYDMLSERKPQARV 574
MATFFESGTWVWIPDEDEVVLPAKAK AFRLG+RATVV+ENG+ DMIYSNIGTILVSVNPFKPLPLYTPQQMERYKEGPRGKPPHVF+VGHRAYY+ML ERKPQ+ +
Sbjct: 1 MATFFESGTWVWIPDEDEVVLPAKAKSAFRLGERATVVMENGT------------------------------------------------DMIYSNIGTILVSVNPFKPLPLYTPQQMERYKEGPRGKPPHVFSVGHRAYYEMLGERKPQSVI 106
BLAST of mRNA_F-serratus_M_contig718.18378.1 vs. uniprot
Match: A0A7S1TYV3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYV3_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.790e-47 Identity = 82/154 (53.25%), Postives = 108/154 (70.13%), Query Frame = 2
Query: 113 MATFFESGTWVWIPDEDEVVLPAKAKRAFRLGDRATVVLENGSTRVLSGRESAYCSLCDPQSMDPKVENLTVLDDLNENSLLNILRTRFRRDMIYSNIGTILVSVNPFKPLPLYTPQQMERYKEGPRGKPPHVFAVGHRAYYDMLSERKPQARV 574
MATF E TWVWIPDE EV LPAK AF+ GD ATV+ E+G L+ +S + +++ P V+NL L+DL E S+L+ LRTRF+ D IY+ + +IL+SVNPFK LPLYTP+ +E+Y+EG R KPPHVFA+G+ AY DML + Q+ V
Sbjct: 1 MATF-EPETWVWIPDETEVALPAKVLTAFKPGDAATVLREDGEEVSLTADQSKDVVAANAEALSPDVDNLISLNDLTEKSILHQLRTRFKSDKIYTYVSSILISVNPFKLLPLYTPEVLEQYREGSRDKPPHVFAIGYNAYNDMLGTGENQSVV 153
BLAST of mRNA_F-serratus_M_contig718.18378.1 vs. uniprot
Match: A0A7S2FEY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FEY1_9STRA) HSP 1 Score: 134 bits (337), Expect = 3.670e-37 Identity = 63/127 (49.61%), Postives = 89/127 (70.08%), Query Frame = 2
Query: 113 MATFFESGTWVWIPDEDEVVLPAKAKRAFRLGDRATVVLENGSTRVLSGRESAYCSLCDPQSMDPKVENLTVLDDLNENSLLNILRTRFRRDMIYSNIGTILVSVNPFKPLPLYTPQQMERYKEGPR 493
MATF E GTW+WIPDE+ LPAK F G+ TV E+G +S +S C+ CD + +D K++NL L+DLNE+++L+ LR RF++D+IY+N+ +I +SVNPFK LPLYTP+ ME+Y+ R
Sbjct: 1 MATF-EEGTWIWIPDEEHKALPAKVLGTFAKGEEGTVRTEDGEDVKVSVADSQLCAFCDEEVLDSKIDNLIALNDLNEHAILHNLRIRFKQDIIYTNVSSICISVNPFKLLPLYTPEVMEKYRVNAR 126
BLAST of mRNA_F-serratus_M_contig718.18378.1 vs. uniprot
Match: A0A7R9YCN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCN6_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.920e-34 Identity = 68/161 (42.24%), Postives = 105/161 (65.22%), Query Frame = 2
Query: 92 KANLKSTMATFFESGTWVWIPDEDEVVLPAKAKRAFRLGDRATVVLENGSTRVLSGRESAYCSLCDPQSMDPKVENLTVLDDLNENSLLNILRTRFRRDMIYSNIGTILVSVNPFKPLPLYTPQQMERYKEGPRGKPPHVFAVGHRAYYDMLSERKPQARV 574
+A +++MA F E + VW+P ++V+ PA F G V+ E+G R+L+ +ES C D + +D V+NL L DLNE+++L+ LR R++ D IY+++ +IL+SVNPFK LPLYTP+ ++ Y+EG RGKPPHVF + A+ MLS+ Q+ +
Sbjct: 20 RAPKEASMAQF-EKRSLVWVPHAEDVMAPATVMEDFSAGQTGKVLTEDGEERILTPKESQQCLEADTEVLDSNVDNLIHLRDLNEHAILHNLRIRYKEDKIYTSVSSILISVNPFKLLPLYTPEVIDDYREGIRGKPPHVFGIAWAAHTQMLSDNINQSVI 179
BLAST of mRNA_F-serratus_M_contig718.18378.1 vs. uniprot
Match: A0A482S4P7_9ARCH (Myosin motor domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S4P7_9ARCH) HSP 1 Score: 128 bits (322), Expect = 1.190e-32 Identity = 57/118 (48.31%), Postives = 87/118 (73.73%), Query Frame = 2
Query: 221 VVLENGSTRVLSGRESAYCSLCDPQSMDPKVENLTVLDDLNENSLLNILRTRFRRDMIYSNIGTILVSVNPFKPLPLYTPQQMERYKEGPRGKPPHVFAVGHRAYYDMLSERKPQARV 574
++ E+G R L+ ++S++C C+P++MD +++L + DLNE S+L+ LR RF+ D IY+NI +IL+SVNPFK LPLYTP+ +E Y+ G RGKPPHVFA+ +Y +ML++ Q+ V
Sbjct: 1 MLTEDGENRALNAQQSSFCEQCNPEAMDSSIQDLVNISDLNEMSILHNLRIRFKEDRIYTNISSILISVNPFKLLPLYTPEILEMYRTGSRGKPPHVFAIAVNSYNNMLADALDQSVV 118
BLAST of mRNA_F-serratus_M_contig718.18378.1 vs. uniprot
Match: A0A2R5G113_9STRA (Myosin-6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G113_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.910e-31 Identity = 70/153 (45.75%), Postives = 101/153 (66.01%), Query Frame = 2
Query: 119 TFFESGTWVWIPDEDEVVLPAKAKRAFRLGDRATVVLENGSTRVLSGRESAYCSLCDPQSMDPKVENLTVLDDLNENSLLNILRTRFRRDMIYSNIGTILVSVNPFKPLPLYTPQQMERYKEGP-RGKPPHVFAVGHRAYYDMLSERKPQARV 574
T F G++VW+PD +++ +PAK AF G+ A + E G T LSGR++ D QS++ +EN+ L DLNE S+L+ LR RF RD IY+ +G+ILV+VNPFK LPLYT + +E YK G R PPHV+AV +A+ +M++ K Q+ +
Sbjct: 2 TTFGHGSYVWLPDPEDMFVPAKVLEAFAAGESARLDRE-GYTVKLSGRDTKDLQRMDEQSLE-SIENMVTLKDLNEMSILHNLRLRFSRDEIYTQVGSILVAVNPFKLLPLYTAEVLEEYKAGDAREMPPHVYAVASQAFRNMIANGKDQSCI 152
BLAST of mRNA_F-serratus_M_contig718.18378.1 vs. uniprot
Match: A0A7S2WSI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSI9_9STRA) HSP 1 Score: 120 bits (300), Expect = 3.040e-31 Identity = 60/126 (47.62%), Postives = 83/126 (65.87%), Query Frame = 2
Query: 197 FRLGDRATVVLENGSTRVLSGRESAYCSLCDPQSMDPKVENLTVLDDLNENSLLNILRTRFRRDMIYSNIGTILVSVNPFKPLPLYTPQQMERYKEGPRGKPPHVFAVGHRAYYDMLSERKPQARV 574
F+ GD V E+G L +SA D + + K++NL L+DLNEN++L+ LR RF+ D+IY+N+ +ILVSVNPFK LPLYTP++ME Y++ R PHVF V +Y MLS+RK Q+ V
Sbjct: 3 FKAGDPGKVRTEDGEDHSLDADKSAKLLPADEEVLSSKIDNLINLNDLNENAILHNLRIRFKEDLIYTNVSSILVSVNPFKLLPLYTPEKMEAYRQNARNLAPHVFQVADASYKGMLSDRKDQSVV 128
BLAST of mRNA_F-serratus_M_contig718.18378.1 vs. uniprot
Match: A0A7S0JX54_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JX54_CAFRO) HSP 1 Score: 125 bits (315), Expect = 5.670e-30 Identity = 60/151 (39.74%), Postives = 101/151 (66.89%), Query Frame = 2
Query: 125 FESGTWVWIPDEDEVVLPAKAKRAFRLGDRATVVLENGSTRVLSGRESAYCSLCDPQSMDPKVENLTVLDDLNENSLLNILRTRFRRDMIYSNIGTILVSVNPFKPLPLYTPQQMERYKEGP-RGKPPHVFAVGHRAYYDMLSERKPQARV 574
FE+G+WVW +E LP K + F+ G V LE+G++ +S SA C +CDP+++ + +N+ +++LNE +++ LR+RF+ IY+ IG IL++VNPF+ LP+YTP+ +++YK+G R +PPH++A+ AY M++E Q+ V
Sbjct: 4 FETGSWVWFLHPEEKWLPGKVTKPFKPGGAGAVDLEDGTSYDISEEVSADCLVCDPEALG-QYDNMVKMNNLNEPVIMHNLRSRFKSKKIYTYIGNILIAVNPFELLPIYTPEILDKYKDGGGRSQPPHIYAIADFAYQGMIAESASQSVV 153
BLAST of mRNA_F-serratus_M_contig718.18378.1 vs. uniprot
Match: A0A5A8CSV2_CAFRO (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CSV2_CAFRO) HSP 1 Score: 125 bits (315), Expect = 5.800e-30 Identity = 60/151 (39.74%), Postives = 101/151 (66.89%), Query Frame = 2
Query: 125 FESGTWVWIPDEDEVVLPAKAKRAFRLGDRATVVLENGSTRVLSGRESAYCSLCDPQSMDPKVENLTVLDDLNENSLLNILRTRFRRDMIYSNIGTILVSVNPFKPLPLYTPQQMERYKEGP-RGKPPHVFAVGHRAYYDMLSERKPQARV 574
FE+G+WVW +E LP K + F+ G V LE+G++ +S SA C +CDP+++ + +N+ +++LNE +++ LR+RF+ IY+ IG IL++VNPF+ LP+YTP+ +++YK+G R +PPH++A+ AY M++E Q+ V
Sbjct: 4 FETGSWVWFLHPEEKWLPGKVTKPFKPGGAGAVDLEDGTSYDISEEVSADCLVCDPEALG-QYDNMVKMNNLNEPVIMHNLRSRFKSKKIYTYIGNILIAVNPFELLPIYTPEILDKYKDGGGRSQPPHIYAIADFAYQGMIAESASQSVV 153 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig718.18378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig718.18378.1 >prot_F-serratus_M_contig718.18378.1 ID=prot_F-serratus_M_contig718.18378.1|Name=mRNA_F-serratus_M_contig718.18378.1|organism=Fucus serratus male|type=polypeptide|length=155bp MATFFESGTWVWIPDEDEVVLPAKAKRAFRLGDRATVVLENGSTRVLSGRback to top mRNA from alignment at F-serratus_M_contig718:860..4306- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig718.18378.1 ID=mRNA_F-serratus_M_contig718.18378.1|Name=mRNA_F-serratus_M_contig718.18378.1|organism=Fucus serratus male|type=mRNA|length=3447bp|location=Sequence derived from alignment at F-serratus_M_contig718:860..4306- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig718:860..4306- >mRNA_F-serratus_M_contig718.18378.1 ID=mRNA_F-serratus_M_contig718.18378.1|Name=mRNA_F-serratus_M_contig718.18378.1|organism=Fucus serratus male|type=CDS|length=930bp|location=Sequence derived from alignment at F-serratus_M_contig718:860..4306- (Fucus serratus male)back to top |