mRNA_F-serratus_M_contig715.18363.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig715.18363.1
Unique NamemRNA_F-serratus_M_contig715.18363.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig715.18363.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 497 bits (1280), Expect = 2.960e-171
Identity = 245/390 (62.82%), Postives = 292/390 (74.87%), Query Frame = 1
Query:    4 LDDDDDIMYTPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTVVTSWDTPNKRPQEEYEDGRSFLNCVSEYESDETCVGQPKNDFGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCVNKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDQCSKYGVFTYQGSDAP-DVSLDGRPGENMFYDNTISNTETGVKIKEADNTVITDNTFVGTSLLEFSDATDTQWLSNT 1170
            LDD  + +  P  ++ KWLLT+EL +  G++FYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE+T+VTSWDTPNK PQ  Y  GRSFLNCVSE  + E CVGQ +N+ GECRMDII+SE+GYLG+FD+ESYGLTWKVRGFC + SNP+VFDTTNVYG++  SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT                                GG  AAGIFLHRSSD   V+DNVV+DMQDAG+A+LES +ADI++N F++VK+GIR+SLG   N V++N+F+  S  G++TYQGSD P D   DGRP +N+F +N I N   GVKIKE D+TVITDN F GTS LEF DA +T+W  NT
Sbjct:  111 LDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVYD------------GGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNT 488          
BLAST of mRNA_F-serratus_M_contig715.18363.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 490 bits (1262), Expect = 1.050e-163
Identity = 235/389 (60.41%), Postives = 280/389 (71.98%), Query Frame = 1
Query:    1 ILDDDDDIMYTPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTVVTSWDTPNKRPQEEYEDGRSFLNCVSEYESDETCVGQPKNDFGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCVNKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDQCSKYGVFTYQGSDAPDVSLDGRPGENMFYDNTISNTETGVKIKEADNTVITDNTFVGTSLLEFSDATDTQWLSN 1167
            +LDDD   +  P+ +T  WLL +EL++  G +FYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQE YE+GRSFLNCVSE  + + C G  KN+ GECRMDII+SE+ YLG+FD+ESYG+TWKVRGFC + SNPEVF+ TNVYGD+  SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA                              GGA AAGIFLHRSSD   V+DN + +MQDAG+A+LESFDA I+ N     KYGIR+SLG GNN VY N F   S+YG++TY+GSD PDVS DGRP  N+   N + +   GVKIKE D+     NTF+     EF ++T+T W  N
Sbjct:  473 MLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGN 860          
BLAST of mRNA_F-serratus_M_contig715.18363.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 468 bits (1203), Expect = 1.970e-160
Identity = 235/398 (59.05%), Postives = 278/398 (69.85%), Query Frame = 1
Query:    1 ILDDDDDIMYTPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTVVTSWDTPNKRPQEEYEDGRSFLNCVSEYESDETCVGQPKNDFGECRMDIIDSEMGYLGWFDAESYGLTWKVR---------GFCVNKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDQCSKYGVFTYQGSDAPDVSLDGRPGENMFYDNTISNTETGVKIKEADNTVITDNTFVGTSLLEFSDATDTQWLSN 1167
            +LD     +  PTSVT KWLL +EL+V  G+IFYC G+  GGDCDELRIQSTG  D++EVRGHGGS+YF +TVVTSWDTPNK+PQE YE GRSFLNCVSE  + ETC G  KND GECRMDII+SEMGY+G+FD+ESYGLTWKVR         GFC + SNP+VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY            +A                              GG  A GIFLHRSSD+ EVY N +++M DAG+A+LESF+ADIHDN    V++GIR+SLG G N VYDN F+ CS +G++TY GSD PDVS +GRP  N F +N ++N+  GVK K +DN V+T+N F GT  LEF DA  T W  N
Sbjct:   46 MLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVS-NGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGN 430          
BLAST of mRNA_F-serratus_M_contig715.18363.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 456 bits (1172), Expect = 5.360e-156
Identity = 226/390 (57.95%), Postives = 274/390 (70.26%), Query Frame = 1
Query:    1 ILDDDDDIMYTPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTVVTSWDTPNKRPQEEYEDGRSFLNCVSEY-ESDETCVGQPKNDFGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCVNKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDQCSKYGVFTYQGSDAPDVSLDGRPGENMFYDNTISNTETGVKIKEADNTVITDNTFVGTSLLEFSDATDTQWLSN 1167
            +LD +D +  T T+ TGKWLLT++LFV  G+  YCRG  +GG+C ELRI+ST  +DF E+RGHGG+LYFE+T+VTSWD   ++PQE Y+DGRSF+ CVSE    ++TC     N+ GECRMDIIDSEMGYLG+  +E+YG+TWKVRGFC + SNP+VFD  NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA                              GGA AAGIFLHRS D  EVY N + +M DAG+A+LE+   DIHDN     ++GIR+ LG  NN V+DNVF      G+FTY GSD P V   GRP +N FY+NTI  TETGVKIKE+DN  IT+N F GT+ +EF++A D  W  N
Sbjct:   35 VLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTCA---INNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVG-GGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGN 420          
BLAST of mRNA_F-serratus_M_contig715.18363.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 414 bits (1064), Expect = 8.560e-141
Identity = 232/389 (59.64%), Postives = 262/389 (67.35%), Query Frame = 1
Query:    1 ILDDDDDIMYTPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTVVTSWDTPNKRPQEEYEDGRSFLNCVSEYESDETCVGQPKNDFGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCVNKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDQCSKYGVFTYQGSDAPDVSLDGRPGENMFYDNTISNTETGVKIKEADNTVITDNTFVGTSLLEFSDATDTQWLSN 1167
            +LDD  + + +PTSVT KWLL SEL+V  G+IFYC G+  GGDCDELRIQSTG  D++EVRGHGGS+YF +TVVTSWDTPNK+PQE YE GRSFLNCVSE  + ETC G+ KND GECRMDII+SEMGY+G+FDAESYGLTWKVRGFC + SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX                 GG +A GIFLHRSSD+ EVY                                                        G       DAPDVS +GRP  N F +N I+NT  GVKIK +DN VI++N F GT  LEF DA  T W  N
Sbjct:    1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVS-NGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDN 333          
BLAST of mRNA_F-serratus_M_contig715.18363.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 1.140e-140
Identity = 200/326 (61.35%), Postives = 234/326 (71.78%), Query Frame = 1
Query:    1 ILDDDDDIMYTPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTVVTSWDTPNKRPQEEYEDGRSFLNCVSEYESDETCVGQPKNDFGECRMDIIDSEMGYLGWFDAESYGLTWK--------VRGFCVNKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDQCSK 954
            +LDDD   +  P+ +T  WLL +EL++  G +FYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQE YE GRSFLNCVSE  + + C G  KN+ GECRMDII+SE+ YLG+FD+ESYG+TWK        VRGFC + SNPEVFD TNVYGD+  SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT                                GGA A GIFLHRSSD   V+DN + +MQDAG+A+LE+FDA I+ NT    KYGIR+SLG GNN+VY N F   S+
Sbjct:   22 MLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVRD------------GGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335          
BLAST of mRNA_F-serratus_M_contig715.18363.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 5.700e-129
Identity = 209/402 (51.99%), Postives = 267/402 (66.42%), Query Frame = 1
Query:    1 ILDDDDDIMY-TPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTVVTSWDTPNKRPQEEYEDGRSFLNCVSEYESDET--CVGQPKNDFGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCVNKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDQCSKYGVFTYQGSDAPDV-SLDGRPGENMFYDNTISNT--ETGVKIKEADNTVITDNTFVGTSLLEFSDATDTQWLSNT 1170
            +LD+++D++  TPT   G WLL   L V+ GS     GT+  GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N + +E   DGRSF+NCV++++      C G+   ++GECRMDII S MG +GWFDAESYGLTWKVRG C          N E+F+  NVYGDI NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+                              GG  A GIFLHRSSD  EV+DNVVY+MQDAG+A++ES+DA+I+DN+FTN +YGIR+SLG G N++ +N+F   ++YG++TY GSD PDV + +GRP +N+F  NTI       GV IKE D+ V  DN F G S  EF D++DT W+ NT
Sbjct:  216 VLDENNDVVGGTPT---GYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613          
BLAST of mRNA_F-serratus_M_contig715.18363.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 1.170e-123
Identity = 206/396 (52.02%), Postives = 254/396 (64.14%), Query Frame = 1
Query:    1 ILDDDDDIMYTPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTVVTSWDTPNKRPQEEYEDGRSFLNCVSEYESD--ETCVGQPKNDFGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCVNKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDQCSKYGVFTYQGSDAPDVSLD--GRPGENMFYDNTISNTETGVKIKEADNTVITDNTFVGTSLLE---FSDATDTQWLSN 1167
            +LD +D+++    S TG WLL  ++ V  GS+    G   GGD   LRIQSTGS D++E+RGHGGSL F +T VTSWDT  K+    Y+  RSF+ CVSE  +D  +TC G   N  GECRMDII SEMG +G+  AESYG++WKVRG+C    NPEVF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA                              GG  A GIFLHRSSD CEV+ N VYDM+DAG+AI+ES  A IHDNTFTNVKYGIR+S+G   N+V +N F +C +YG++TYQG+D P+ S D  G   +N F+ NT+   E GVKI++A+  V TDN F   S  E   F D  D  W +N
Sbjct:  428 VLDSNDNVV--GGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNN 818          
BLAST of mRNA_F-serratus_M_contig715.18363.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 360 bits (924), Expect = 1.240e-117
Identity = 194/392 (49.49%), Postives = 241/392 (61.48%), Query Frame = 1
Query:   13 DDDIMYTPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTVVTSWDTPNKRPQEEYEDGRSFLNCVSEY--ESDETCVGQPKNDFGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCVNKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDQCSKYGVFTYQGSDAPDVSLDGRPGENMFYDNTISNTETGVKIKEADNTVITDNTF-VGTS---LLEFSDATDTQWLSNT 1170
            D D     TS TG WLLT EL+V  G      G+  GGD DELR+ ST  T F  +R HGGSL F +T V SWDT    P E+  DGRS+++ +SE   + DETC G  KN  GE RMDI  SE+GYLG++D+ESYGLTWKVRGFC +KSNPEVFD  NVYG++ +SDIHHM +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI                               G   +AGIFLHRSSD   V  N V+D  DAGLA+LESF+AD+ +NTF N KYG+R S+G  +N+  +N     ++Y  ++Y G+D PDV   GR   N+F  N+ S  E  +KIKEAD T   DN F VG +   ++ F +AT+     NT
Sbjct:   89 DPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNT 479          
BLAST of mRNA_F-serratus_M_contig715.18363.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 3.950e-117
Identity = 193/381 (50.66%), Postives = 238/381 (62.47%), Query Frame = 1
Query:   46 TGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTVVTSWDTPNKRPQEEYEDGRSFLNCVSEY--ESDETCVGQPKNDFGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCVNKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDQCSKYGVFTYQGSDAPDVSLDGRPGENMFYDNTISNTETGVKIKEADNTVITDNTF-VGTS---LLEFSDATDTQWLSNT 1170
            TG WLLT EL+V  G      GT  GGD DELR+ ST  T +  +R HGGSL F  T V SWDT    P E+  DGRS+++ VSE   + DETC G  KN  GE RMDI +SE+GYLG+ D+ESYGLTWKVRGFC +KSNPE+FD  NVYG++ +SDIHH+ +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI                               G   +AGIFLHRSSD   V  N V+D  DAGLA+LESF+AD+ +NTF N KYG+R+S+G  +N+  +N+    SKY  +TY GSD PDV   GR   N+F  N+ S  E  +KIKEAD T   DN F VG +   ++ F DA ++    NT
Sbjct:  104 TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNT 483          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig715.18363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM4_ECTSI2.960e-17162.82Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D8LC73_ECTSI1.050e-16360.41Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5JGU8_9PHAE1.970e-16059.05MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FRR8_ECTSI5.360e-15657.95Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FIU4_ECTSI8.560e-14159.64Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE1.140e-14061.35MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G8D9_ECTSI5.700e-12951.99Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JNF5_9PHAE1.170e-12352.02MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G339_ECTSI1.240e-11749.49Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI3.950e-11750.66Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig715contigF-serratus_M_contig715:159875..162017 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score492.3
Seed ortholog evalue2.1e-136
Seed eggNOG ortholog2880.D8LC73
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons5
Model size1170
Cds size1146
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig715.18363.1prot_F-serratus_M_contig715.18363.1Fucus serratus malepolypeptideF-serratus_M_contig715 159875..161993 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932193.3476927-CDS-F-serratus_M_contig715:159874..1599451622932193.3476927-CDS-F-serratus_M_contig715:159874..159945Fucus serratus maleCDSF-serratus_M_contig715 159875..159945 -
1690964192.6419666-CDS-F-serratus_M_contig715:159874..1599451690964192.6419666-CDS-F-serratus_M_contig715:159874..159945Fucus serratus maleCDSF-serratus_M_contig715 159875..159945 -
1622932193.3966556-CDS-F-serratus_M_contig715:160358..1605021622932193.3966556-CDS-F-serratus_M_contig715:160358..160502Fucus serratus maleCDSF-serratus_M_contig715 160359..160502 -
1690964192.6555982-CDS-F-serratus_M_contig715:160358..1605021690964192.6555982-CDS-F-serratus_M_contig715:160358..160502Fucus serratus maleCDSF-serratus_M_contig715 160359..160502 -
1622932193.4138527-CDS-F-serratus_M_contig715:160707..1608721622932193.4138527-CDS-F-serratus_M_contig715:160707..160872Fucus serratus maleCDSF-serratus_M_contig715 160708..160872 -
1690964192.6665368-CDS-F-serratus_M_contig715:160707..1608721690964192.6665368-CDS-F-serratus_M_contig715:160707..160872Fucus serratus maleCDSF-serratus_M_contig715 160708..160872 -
1622932193.4323056-CDS-F-serratus_M_contig715:161099..1613371622932193.4323056-CDS-F-serratus_M_contig715:161099..161337Fucus serratus maleCDSF-serratus_M_contig715 161100..161337 -
1690964192.6768422-CDS-F-serratus_M_contig715:161099..1613371690964192.6768422-CDS-F-serratus_M_contig715:161099..161337Fucus serratus maleCDSF-serratus_M_contig715 161100..161337 -
1622932193.4481308-CDS-F-serratus_M_contig715:161465..1619931622932193.4481308-CDS-F-serratus_M_contig715:161465..161993Fucus serratus maleCDSF-serratus_M_contig715 161466..161993 -
1690964192.6866903-CDS-F-serratus_M_contig715:161465..1619931690964192.6866903-CDS-F-serratus_M_contig715:161465..161993Fucus serratus maleCDSF-serratus_M_contig715 161466..161993 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932193.4638507-UTR-F-serratus_M_contig715:161993..1620171622932193.4638507-UTR-F-serratus_M_contig715:161993..162017Fucus serratus maleUTRF-serratus_M_contig715 161994..162017 -
1690964192.6992073-UTR-F-serratus_M_contig715:161993..1620171690964192.6992073-UTR-F-serratus_M_contig715:161993..162017Fucus serratus maleUTRF-serratus_M_contig715 161994..162017 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig715.18363.1

>prot_F-serratus_M_contig715.18363.1 ID=prot_F-serratus_M_contig715.18363.1|Name=mRNA_F-serratus_M_contig715.18363.1|organism=Fucus serratus male|type=polypeptide|length=382bp
MYTPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFH
EVRGHGGSLYFENTVVTSWDTPNKRPQEEYEDGRSFLNCVSEYESDETCV
GQPKNDFGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCVNKSNPEVFD
TTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSD
YLTIANNEVYNNENHGIIASKRCNNVKIYDNEVYNGGAQAAGIFLHRSSD
SCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNMV
YDNVFDQCSKYGVFTYQGSDAPDVSLDGRPGENMFYDNTISNTETGVKIK
EADNTVITDNTFVGTSLLEFSDATDTQWLSNT
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mRNA from alignment at F-serratus_M_contig715:159875..162017-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig715.18363.1 ID=mRNA_F-serratus_M_contig715.18363.1|Name=mRNA_F-serratus_M_contig715.18363.1|organism=Fucus serratus male|type=mRNA|length=2143bp|location=Sequence derived from alignment at F-serratus_M_contig715:159875..162017- (Fucus serratus male)
ATCCTCGACGATGACGACGACATCATGTACACCCCTACTAGCGTGACAGG TAAGTGGCTCCTCACGTCCGAGCTGTTCGTCCTCAGAGGATCCATCTTCT ACTGCCGCGGCACGAGCATAGGCGGTGACTGCGATGAGCTTCGAATCCAA TCAACCGGCTCCACGGACTTCCACGAGGTGCGCGGTCATGGTGGCAGCCT GTACTTCGAGAACACCGTCGTCACCTCGTGGGACACCCCGAACAAGCGCC CGCAGGAAGAGTACGAGGATGGTCGCTCCTTCCTTAACTGCGTGTCCGAG TATGAATCGGACGAGACGTGTGTGGGCCAGCCCAAGAATGATTTCGGAGA GTGCCGCATGGACATCATCGACTCCGAGATGGGTTACCTGGGATGGTTCG ACGCGGAGTCCTACGGGCTGACCTGGAAGGTCCGGGGGTTCTGCGTCAAC AAGAGCAACCCGGAGGTGTTCGACACAACGAACGTGTACGGTGATATCAA GAACTCCGACATTCACCACATGTACTACGGCATGTACTCCTACGGCCACC AGGTAATGTTGGAAAGTTCTTGGGATTAGCGAGTGAGGTTATCGTGCTGC TATCGCGTCAGTGTACGATGTCTCTTGTTTGTATTTGACGCCGCAATATC GCGTTATCTTTCACTTCTCGGATGTGACAGGGCGGTGTGTGGACGAACAA CAAGATGCACGACAACCACCAGTACGGGTTTGACCCCCACGACGACTCCG ACTACCTCACCATCGCCAACAACGAGGTCTACAACAATGAAAACCACGGC ATCATTGCCTCCAAGCGCTGCAACAACGTCAAGATCTACGACAATGAGGT CTACAACGGCGGTGCGCAGGCTGCGGGCATCTTCCTCCACCGCAGCTCCG ACAGCTGCGAGGTCTACGGTGAGTGGGTCCAGAAGATTTTTCCTCGACAA CCCTCCGTGTCTCTCACACAGGACCGCACTAGCAGTTACGTGCACCCCGA TGGCGCCTCCGCCGTCTCACGACAGTCATTAATCGGATCATCAATATTTG CAATAACTGTCTCACGAATAAAAGTGTTGTTGGCCTTCCCTTCTTTCCCA AAAACCCATCCCCTCATCCCCATCAAAACATGCTTCGCCGGGCAGACAAC GTGGTCTACGATATGCAGGACGCAGGTCTGGCCATCCTAGAGTCTTTTGA CGCTGATATCCACGACAACACTTTCACGAACGTCAAGTACGGGATCCGCA TCAGCCTTGGAGGGGGGAACAACATGGTGTACGATAACGTATTCGACCAG TGCTCAAAGTGTGAGTAAAGACTCCACCCAATCCATGGTAGATCATTGCA CTCTTTTGACTCTTGCCCTGTAGAATCGACCGGGTCGGACGGCAACAAAA ATAGTGAAAACGAGGGCCTTCACTCCTCAAGCATGCAAAATCTGCGCCAG TCCTGCCTCATGTCACGTTCCTTGCCGACTTTTCCACATCTCGCGACGCT CGACACTCCCTGCAGACGGTGTCTTCACCTACCAGGGCTCCGACGCCCCC GACGTTTCTCTTGACGGCCGACCCGGCGAGAACATGTTCTACGACAACAC AATCTCTAACACCGAGACGGGCGTCAAGATCAAAGAGGCGGATAACACCG TCATCACCGGTGAGACATCTATCCGGCGATCTGACAAGAAACGCGGAACA GTATAACTCAGTGCCTCCCACGAATTTCGTTCTGTTCGTGAGCCTGTGCG TACTTATACTGCGAGTATGTGGAAGCTTTTGATGTAGATGTAAAAAGTGC GCGTCGCGAGCGTACGTATGGAAACGTTGGACGGGGTTGGAGGCGTGCGG CCGGATTCCTGGCTCGCGTGCGTGCTTTGTGCGAGTGTTACGTGCGTATA TGACAAAAATCTACGGTCGCATCTGTTGACGATTAAGCGAAGCGTATCGA TGCTTTGGGGAGATCCGCAGCTCCTTGGCACTGCGGTAGACATCCTCATC ACCTCCGCTGTTTCCGTCGCTGTGCTCTGGATATGGATTTGGTGCTGCTT ATGCCTCGTCCTGTCCGTGCAGATAACACGTTCGTGGGGACCTCTCTTCT CGAGTTCAGCGACGCGACAGACACGCAGTGGTTGAGCAACACC
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Coding sequence (CDS) from alignment at F-serratus_M_contig715:159875..162017-

>mRNA_F-serratus_M_contig715.18363.1 ID=mRNA_F-serratus_M_contig715.18363.1|Name=mRNA_F-serratus_M_contig715.18363.1|organism=Fucus serratus male|type=CDS|length=2292bp|location=Sequence derived from alignment at F-serratus_M_contig715:159875..162017- (Fucus serratus male)
ATGTACACCCCTACTAGCGTGACAGGTAAGTGGCTCCTCACGTCCGAGCT
GTTCGTCCTCAGAGGATCCATCTTCTACTGCCGCGGCACGAGCATAGGCG
GTGACTGCGATGAGCTTCGAATCCAATCAACCGGCTCCACGGACTTCCAC
GAGGTGCGCGGTCATGGTGGCAGCCTGTACTTCGAGAACACCGTCGTCAC
CTCGTGGGACACCCCGAACAAGCGCCCGCAGGAAGAGTACGAGGATGGTC
GCTCCTTCCTTAACTGCGTGTCCGAGTATGAATCGGACGAGACGTGTGTG
GGCCAGCCCAAGAATGATTTCGGAGAGTGCCGCATGGACATCATCGACTC
CGAGATGGGTTACCTGGGATGGTTCGACGCGGAGTCCTACGGGCTGACCT
GGAAGGTCCGGGGGTTCTGCGTCAACAAGAGCAACCCGGAGGTGTTCGAC
ACAACGAACGTGTACGGTGATATCAAGAACTCCGACATTCACCACATGTA
CTACGGCATGTACTCCTACGGCCACCAGATGTACACCCCTACTAGCGTGA
CAGGTAAGTGGCTCCTCACGTCCGAGCTGTTCGTCCTCAGAGGATCCATC
TTCTACTGCCGCGGCACGAGCATAGGCGGTGACTGCGATGAGCTTCGAAT
CCAATCAACCGGCTCCACGGACTTCCACGAGGTGCGCGGTCATGGTGGCA
GCCTGTACTTCGAGAACACCGTCGTCACCTCGTGGGACACCCCGAACAAG
CGCCCGCAGGAAGAGTACGAGGATGGTCGCTCCTTCCTTAACTGCGTGTC
CGAGTATGAATCGGACGAGACGTGTGTGGGCCAGCCCAAGAATGATTTCG
GAGAGTGCCGCATGGACATCATCGACTCCGAGATGGGTTACCTGGGATGG
TTCGACGCGGAGTCCTACGGGCTGACCTGGAAGGTCCGGGGGTTCTGCGT
CAACAAGAGCAACCCGGAGGTGTTCGACACAACGAACGTGTACGGTGATA
TCAAGAACTCCGACATTCACCACATGTACTACGGCATGTACTCCTACGGC
CACCAGGGCGGTGTGTGGACGAACAACAAGATGCACGACAACCACCAGTA
CGGGTTTGACCCCCACGACGACTCCGACTACCTCACCATCGCCAACAACG
AGGTCTACAACAATGAAAACCACGGCATCATTGCCTCCAAGCGCTGCAAC
AACGTCAAGATCTACGACAATGAGGTCTACAACGGCGGTGCGCAGGCTGC
GGGCATCTTCCTCCACCGCAGCTCCGACAGCTGCGAGGTCTACGGGCGGT
GTGTGGACGAACAACAAGATGCACGACAACCACCAGTACGGGTTTGACCC
CCACGACGACTCCGACTACCTCACCATCGCCAACAACGAGGTCTACAACA
ATGAAAACCACGGCATCATTGCCTCCAAGCGCTGCAACAACGTCAAGATC
TACGACAATGAGGTCTACAACGGCGGTGCGCAGGCTGCGGGCATCTTCCT
CCACCGCAGCTCCGACAGCTGCGAGGTCTACGACAACGTGGTCTACGATA
TGCAGGACGCAGGTCTGGCCATCCTAGAGTCTTTTGACGCTGATATCCAC
GACAACACTTTCACGAACGTCAAGTACGGGATCCGCATCAGCCTTGGAGG
GGGGAACAACATGGTGTACGATAACGTATTCGACCAGTGCTCAAAGTACA
ACGTGGTCTACGATATGCAGGACGCAGGTCTGGCCATCCTAGAGTCTTTT
GACGCTGATATCCACGACAACACTTTCACGAACGTCAAGTACGGGATCCG
CATCAGCCTTGGAGGGGGGAACAACATGGTGTACGATAACGTATTCGACC
AGTGCTCAAAGTACGGTGTCTTCACCTACCAGGGCTCCGACGCCCCCGAC
GTTTCTCTTGACGGCCGACCCGGCGAGAACATGTTCTACGACAACACAAT
CTCTAACACCGAGACGGGCGTCAAGATCAAAGAGGCGGATAACACCGTCA
TCACCGACGGTGTCTTCACCTACCAGGGCTCCGACGCCCCCGACGTTTCT
CTTGACGGCCGACCCGGCGAGAACATGTTCTACGACAACACAATCTCTAA
CACCGAGACGGGCGTCAAGATCAAAGAGGCGGATAACACCGTCATCACCG
ATAACACGTTCGTGGGGACCTCTCTTCTCGAGTTCAGCGACGCGACAGAC
ACGCAGTGGTTGAGCAACACCATAACACGTTCGTGGGGACCTCTCTTCTC
GAGTTCAGCGACGCGACAGACACGCAGTGGTTGAGCAACACC
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