mRNA_F-serratus_M_contig714.18355.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig714.18355.1 vs. uniprot
Match: D8LN78_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN78_ECTSI) HSP 1 Score: 175 bits (443), Expect = 2.900e-48 Identity = 87/126 (69.05%), Postives = 99/126 (78.57%), Query Frame = 1
Query: 1 CVIHRDLKPENLLVTHDFRIKITDFGEATGKGNDGAHTQVGTLLYIAPEIIRGERYDERCDVYSFAIVLLAMLRLKDDVIAYFAEEIRRRKQTEKQKYGEAEPLETFTHMAITNSIVNNGLRPRLP 378
C+IHRDLKP+NLLVTHD+R+KI+DFG ATG+GND TQVGTLLYIAPEI+RG+ YDERCD+YSFA+VLLAML+LKDDV+ FAEE RR T G THMAITN IVN GLRP LP
Sbjct: 1021 CIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDTQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDDVVTVFAEEAVRRGSTPPAGVGWVGG--GLTHMAITNQIVNEGLRPTLP 1144
BLAST of mRNA_F-serratus_M_contig714.18355.1 vs. uniprot
Match: A0A6H5JK37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK37_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.870e-47 Identity = 86/126 (68.25%), Postives = 98/126 (77.78%), Query Frame = 1
Query: 1 CVIHRDLKPENLLVTHDFRIKITDFGEATGKGNDGAHTQVGTLLYIAPEIIRGERYDERCDVYSFAIVLLAMLRLKDDVIAYFAEEIRRRKQTEKQKYGEAEPLETFTHMAITNSIVNNGLRPRLP 378
C+IHRDLKP+NLLVTHD+R+KI+DFG ATG+GND QVGTLLYIAPEI+RG+ YDERCD+YSFA+VLLAML+LKDDV+ FAEE RR T G THMAITN IVN GLRP LP
Sbjct: 1090 CIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDIQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDDVVTVFAEEAVRRGSTPPAGMGWVGG--GLTHMAITNQIVNEGLRPTLP 1213
BLAST of mRNA_F-serratus_M_contig714.18355.1 vs. uniprot
Match: A0A6V1QL76_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QL76_HETAK) HSP 1 Score: 148 bits (374), Expect = 1.250e-40 Identity = 77/126 (61.11%), Postives = 92/126 (73.02%), Query Frame = 1
Query: 1 CVIHRDLKPENLLVTHDFRIKITDFGEATGKGNDGAHTQVGTLLYIAPEIIRGERYDERCDVYSFAIVLLAMLRLKDDVIAYFAEEIRRRKQTEKQKYGEAEPLETFTHMAITNSIVNNGLRPRLP 378
C+IHRDLKP+NLLVT + IKITDFGEA K + T VGTLLYIAPE++RG+RYDE+CDVYSFAIV+LA L+LK +++ FAE I KQ GEA+P T+T M IT IVN LRP LP
Sbjct: 204 CIIHRDLKPQNLLVTRSYGIKITDFGEARSKNQNATMTAVGTLLYIAPEVVRGDRYDEKCDVYSFAIVMLAALQLKPNIVDVFAETI---KQEHLASGGEAKPA-TYTPMYITTRIVNEHLRPILP 325
BLAST of mRNA_F-serratus_M_contig714.18355.1 vs. uniprot
Match: A0A835ZFS3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFS3_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.550e-31 Identity = 57/88 (64.77%), Postives = 69/88 (78.41%), Query Frame = 1
Query: 1 CVIHRDLKPENLLVTHDFRIKITDFGEATGKGNDGAHTQVGTLLYIAPEIIRGERYDERCDVYSFAIVLLAMLRLKDDVIAYFAEEIR 264
C+IHRDLKP+N+LVT IKITDFGEA ND TQVGTLLYIAPEI+RG++YDE+CDVYSFA+VLL ML+L++ V F +R
Sbjct: 130 CIIHRDLKPQNMLVTATLGIKITDFGEARVVDNDYTMTQVGTLLYIAPEIVRGDKYDEKCDVYSFAVVLLGMLQLREHVFDLFVAALR 217
BLAST of mRNA_F-serratus_M_contig714.18355.1 vs. uniprot
Match: W7U3S3_9STRA (Protein kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3S3_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.260e-30 Identity = 53/87 (60.92%), Postives = 70/87 (80.46%), Query Frame = 1
Query: 1 CVIHRDLKPENLLVTHDFRIKITDFGEATGKGNDGAHTQVGTLLYIAPEIIRGERYDERCDVYSFAIVLLAMLRLKDDVIAYFAEEI 261
CV+HRDLKP+N+LVT + ++ITDFGEA ++ TQVGT L++APE++RGERY E+CDVYSFA+VLLAML L+ DV+ FAE +
Sbjct: 83 CVVHRDLKPQNILVTDSYHVQITDFGEARTVDHENTMTQVGTQLFVAPEVVRGERYSEKCDVYSFAVVLLAMLELRPDVLDVFAESL 169
BLAST of mRNA_F-serratus_M_contig714.18355.1 vs. uniprot
Match: K8YUM3_NANGC (Deah (Asp-glu-ala-his) box polypeptide 36 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUM3_NANGC) HSP 1 Score: 121 bits (304), Expect = 1.580e-29 Identity = 58/109 (53.21%), Postives = 81/109 (74.31%), Query Frame = 1
Query: 1 CVIHRDLKPENLLVTHDFRIKITDFGEATGKGNDGAHTQVGTLLYIAPEIIRGERYDERCDVYSFAIVLLAMLRLKDDVIAYFAEEIRRRKQTE----KQKYGEAEPLE 315
CV+HRDLKP+N+LVT + ++ITDFGEA ++ TQVGT L++APE++RGERY E+CDVYSFA+VLLAML L+ DV+ FAE + +++E K++ E E +E
Sbjct: 713 CVVHRDLKPQNILVTDSYHVQITDFGEARTVDHENTMTQVGTQLFVAPEVVRGERYSEKCDVYSFAVVLLAMLELRPDVLDVFAESLSEVERSETGITKERLKEPEGVE 821
BLAST of mRNA_F-serratus_M_contig714.18355.1 vs. uniprot
Match: A0A4D9DAM1_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAM1_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.060e-29 Identity = 53/87 (60.92%), Postives = 70/87 (80.46%), Query Frame = 1
Query: 1 CVIHRDLKPENLLVTHDFRIKITDFGEATGKGNDGAHTQVGTLLYIAPEIIRGERYDERCDVYSFAIVLLAMLRLKDDVIAYFAEEI 261
CV+HRDLKP+N+LVT + ++ITDFGEA ++ TQVGT L++APE++RGERY E+CDVYSFA+VLLAML L+ DV+ FAE +
Sbjct: 715 CVVHRDLKPQNILVTDSYHVQITDFGEARTVDHENTMTQVGTQLFVAPEVVRGERYSEKCDVYSFAVVLLAMLELRPDVLDVFAESL 801
BLAST of mRNA_F-serratus_M_contig714.18355.1 vs. uniprot
Match: A0A6A7FVV3_9CRUS (Serine/threonine kinase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FVV3_9CRUS) HSP 1 Score: 92.0 bits (227), Expect = 3.200e-19 Identity = 50/125 (40.00%), Postives = 68/125 (54.40%), Query Frame = 1
Query: 4 VIHRDLKPENLLVTHDFRIKITDFGEATGKGNDGAHTQVGTLLYIAPEIIRGERYDERCDVYSFAIVLLAMLRLKDDVIAYFAEEIRRRKQTEKQKYGEAEPLETFTHMAITNSIVNNGLRPRLP 378
++HRDLK +NLLVT D+ IK+ DFG + + TQVGT +++APE+I GE+Y E+ DVYSF I++ +L LK EP E M I +VN GLRP +P
Sbjct: 385 ILHRDLKSDNLLVTIDWHIKVGDFGLTRFRDDQKVMTQVGTPMWMAPEVILGEKYTEKADVYSFGIIIWEVLTLK-------------------------EPYEDKEMMQIVIEVVNKGLRPTIP 484
BLAST of mRNA_F-serratus_M_contig714.18355.1 vs. uniprot
Match: A0A7S2W4D7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4D7_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.630e-18 Identity = 41/70 (58.57%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 1 CVIHRDLKPENLLVTHDFRIKITDFGEATGKGNDGAHTQVGTLLYIAPEIIRGERYDERCDVYSFAIVLL 210
CVIHRDLKPEN+L+ F KI+DFG + K D T GT L+ APE+ RGE YDE CDVYSF ++LL
Sbjct: 73 CVIHRDLKPENVLIGETFNAKISDFGISRAKQLDALMTSTGTPLFAAPEVQRGEIYDESCDVYSFGVLLL 142
BLAST of mRNA_F-serratus_M_contig714.18355.1 vs. uniprot
Match: A0A7S2VVS9_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVS9_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 3.230e-18 Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 1
Query: 4 VIHRDLKPENLLVTHDFRIKITDFGEATGKGNDGAHTQVGTLLYIAPEIIRGERYDERCDVYSFAIVLLAMLRLKDDVIAYFAEEIRRRKQTEKQKYGEAEPLETFTHMAITNSIVNNGLRP 369
++HRD+KP+N L+T F +KI DFGE+ D TQVGT L++APE++ GE+YD +CD+YS A+ +L+ + ++ F E G + I++ ++NN RP
Sbjct: 960 IVHRDMKPDNCLITETFSVKIGDFGESKAILEDETMTQVGTPLFVAPEVVMGEQYDSKCDIYSLAMTILSFALKGEQLLTNFLHMAWVASFGENSDQGAKAAALSVNAGRISHKMINNQWRP 1081 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig714.18355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig714.18355.1 >prot_F-serratus_M_contig714.18355.1 ID=prot_F-serratus_M_contig714.18355.1|Name=mRNA_F-serratus_M_contig714.18355.1|organism=Fucus serratus male|type=polypeptide|length=126bp CVIHRDLKPENLLVTHDFRIKITDFGEATGKGNDGAHTQVGTLLYIAPEIback to top mRNA from alignment at F-serratus_M_contig714:244645..248964- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig714.18355.1 ID=mRNA_F-serratus_M_contig714.18355.1|Name=mRNA_F-serratus_M_contig714.18355.1|organism=Fucus serratus male|type=mRNA|length=4320bp|location=Sequence derived from alignment at F-serratus_M_contig714:244645..248964- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig714:244645..248964- >mRNA_F-serratus_M_contig714.18355.1 ID=mRNA_F-serratus_M_contig714.18355.1|Name=mRNA_F-serratus_M_contig714.18355.1|organism=Fucus serratus male|type=CDS|length=756bp|location=Sequence derived from alignment at F-serratus_M_contig714:244645..248964- (Fucus serratus male)back to top |