mRNA_F-serratus_M_contig711.18327.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig711.18327.1 vs. uniprot
Match: D8LHZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ0_ECTSI) HSP 1 Score: 174 bits (441), Expect = 6.340e-43 Identity = 104/236 (44.07%), Postives = 154/236 (65.25%), Query Frame = 2
Query: 212 INSKERRMAQKLRAEEVLRRKRDQEEEHRRYIIDHQRVAAPKPA-ERTAERQRAEALLVVVTCALAFTEWEKAVKEGQDARLRTESRMKAAIIIQRKCRQLRAKRTWMAVRSAGPAVLKLMYRMRLRGESAKEVVADRRKREAADLIVAMLKAGTRSLFRTKIARFCEKIKSCQRYMTSFIAISLARKKALALKWTRQVGKLDEKRFHMYLAHLRDMYSFDPKAVDTILKDMRILA 916
+++ +R AQ LRA+EVLRRKR E+E + + + V + ++ E++RAE L+ V CA+ F EW+ E + A+ + E + A I+QR R R +RT VR + PAV +++ MR + A++ VA R K +AADLI L+AGTR+LFRT+I+ + ++I CQR TS+ ++ ARK+AL KWTR V K+DE+RF MY AHLRDMY+FDP V+ +LK+MR+L+
Sbjct: 200 VSASDRSAAQTLRAQEVLRRKRAIEDERNKQVRERSAVLQHEARRDKRLEKKRAEKLITYVCCAVGFAEWKVRFDEKRTAKHQAERKDHCARILQRVWRFNRIRRTIAKVRESTPAVRMIVFGMRRKAAVARKTVARRHKTQAADLIRCALRAGTRTLFRTRISYYRDRIIKCQRLFTSYREVTKARKRALTNKWTRHVHKVDERRFSMYSAHLRDMYNFDPVQVEGVLKEMRLLS 435 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig711.18327.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig711.18327.1 >prot_F-serratus_M_contig711.18327.1 ID=prot_F-serratus_M_contig711.18327.1|Name=mRNA_F-serratus_M_contig711.18327.1|organism=Fucus serratus male|type=polypeptide|length=582bp MAQKLRAEEVLRRKRDQEEEHRRYIIDHQRVAAPKPAERTAERQRAEALLback to top mRNA from alignment at F-serratus_M_contig711:332845..355443- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig711.18327.1 ID=mRNA_F-serratus_M_contig711.18327.1|Name=mRNA_F-serratus_M_contig711.18327.1|organism=Fucus serratus male|type=mRNA|length=22599bp|location=Sequence derived from alignment at F-serratus_M_contig711:332845..355443- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig711:332845..355443- >mRNA_F-serratus_M_contig711.18327.1 ID=mRNA_F-serratus_M_contig711.18327.1|Name=mRNA_F-serratus_M_contig711.18327.1|organism=Fucus serratus male|type=CDS|length=3492bp|location=Sequence derived from alignment at F-serratus_M_contig711:332845..355443- (Fucus serratus male)back to top |