mRNA_F-serratus_M_contig710.18316.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig710.18316.1
Unique NamemRNA_F-serratus_M_contig710.18316.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig710.18316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig710contigF-serratus_M_contig710:210620..213002 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-28_001410.1
Exons4
Model size1094
Cds size1092
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig710.18316.1prot_F-serratus_M_contig710.18316.1Fucus serratus malepolypeptideF-serratus_M_contig710 210620..213001 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932185.556477-CDS-F-serratus_M_contig710:210619..2112361622932185.556477-CDS-F-serratus_M_contig710:210619..211236Fucus serratus maleCDSF-serratus_M_contig710 210620..211236 +
1690964189.147661-CDS-F-serratus_M_contig710:210619..2112361690964189.147661-CDS-F-serratus_M_contig710:210619..211236Fucus serratus maleCDSF-serratus_M_contig710 210620..211236 +
1622932185.5764241-CDS-F-serratus_M_contig710:211781..2119531622932185.5764241-CDS-F-serratus_M_contig710:211781..211953Fucus serratus maleCDSF-serratus_M_contig710 211782..211953 +
1690964189.1568205-CDS-F-serratus_M_contig710:211781..2119531690964189.1568205-CDS-F-serratus_M_contig710:211781..211953Fucus serratus maleCDSF-serratus_M_contig710 211782..211953 +
1622932185.6015644-CDS-F-serratus_M_contig710:212390..2125271622932185.6015644-CDS-F-serratus_M_contig710:212390..212527Fucus serratus maleCDSF-serratus_M_contig710 212391..212527 +
1690964189.1690993-CDS-F-serratus_M_contig710:212390..2125271690964189.1690993-CDS-F-serratus_M_contig710:212390..212527Fucus serratus maleCDSF-serratus_M_contig710 212391..212527 +
1622932185.6228166-CDS-F-serratus_M_contig710:212835..2130011622932185.6228166-CDS-F-serratus_M_contig710:212835..213001Fucus serratus maleCDSF-serratus_M_contig710 212836..213001 +
1690964189.1792333-CDS-F-serratus_M_contig710:212835..2130011690964189.1792333-CDS-F-serratus_M_contig710:212835..213001Fucus serratus maleCDSF-serratus_M_contig710 212836..213001 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig710.18316.1

>prot_F-serratus_M_contig710.18316.1 ID=prot_F-serratus_M_contig710.18316.1|Name=mRNA_F-serratus_M_contig710.18316.1|organism=Fucus serratus male|type=polypeptide|length=364bp
CSVDSTNLRRQDRLLSICSRSMIFVNMIARVRYHCLLVVVLMHFLPESTH
AFAVTTARRSSAIKSPQPMCPDELISHTVGSTRNFLYTKATDIYGPSLMI
PKLARSQSRCHRALPSVFGRTPRESDGTEHTTSASEHTFVAYNCRYKPHD
QRKQDEFGRIINNIESGRGGGGGEFGWLQKFGNGKADILGLVLSTILLMM
AVPHVGATVNVAVTEQRLVERPDAHRAKLYTIESAHAPLFAVDGKDIIKR
SVDSKRAERQQSKEETMLSRTLAKMTRSTENAVQSAINNPKSIASWRNNF
GGQDNRLARNRPERVASSSGFDATEFVSPLETDNGKGLYHQHTNDIKSRL
SPRLEVDSTVSAAQ
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mRNA from alignment at F-serratus_M_contig710:210620..213002+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig710.18316.1 ID=mRNA_F-serratus_M_contig710.18316.1|Name=mRNA_F-serratus_M_contig710.18316.1|organism=Fucus serratus male|type=mRNA|length=2383bp|location=Sequence derived from alignment at F-serratus_M_contig710:210620..213002+ (Fucus serratus male)
TGCTCGGTCGACTCAACAAACCTCCGTAGACAAGATCGTTTACTGAGTAT
CTGCAGCAGAAGCATGATCTTCGTGAATATGATCGCAAGAGTACGCTATC
ATTGTCTTCTGGTCGTGGTATTAATGCACTTTCTTCCCGAGTCAACACAC
GCCTTTGCTGTCACGACGGCTAGGCGGTCGTCGGCCATCAAATCGCCGCA
ACCCATGTGCCCCGACGAGCTCATCAGCCACACAGTAGGCAGCACAAGAA
ATTTTTTATATACTAAAGCCACCGATATTTATGGACCATCTCTGATGATC
CCAAAGCTTGCTAGATCGCAATCCCGATGTCATCGGGCGCTACCAAGCGT
GTTTGGACGCACCCCTAGAGAAAGTGATGGGACGGAACACACTACAAGTG
CTAGTGAACATACATTCGTCGCTTATAACTGTAGGTACAAACCTCACGAT
CAGCGGAAACAAGATGAATTTGGGCGAATCATCAACAATATCGAGTCAGG
AAGGGGGGGCGGAGGTGGCGAATTCGGATGGCTGCAAAAGTTCGGCAACG
GGAAAGCGGACATACTCGGGCTCGTGCTGTCTACGATACTCCTCATGATG
GCTGTCCCCCATGTAGGGTGAGTCGTATTTAACGCTCGATAATATTCTCC
CAAAGTTAGGTTGATGTGGCATGGGAAAATGCTGACACTGAAGGAGCGGG
GAATGAGCACATCGGGGGTTGGAGCTTGTCAACCGAAGCCTCGCGTCTTT
TTTTTTGTGTTTAATGTTCACGTTTTTTGCATAAATGTCCAAATAATTAG
TTTTGCAAGCGCCGGGCCTCTGCTTCGCATTAACCAGAAATCAATATTTG
GAGCCAGGTACGTCCCACATCTACAGAATCGTAACATTACCGACTATGGA
TTATCCGCTTTTTTTGTAGTTGTGTTATTTAAATTATGGTCTCACGTGGA
ATGATAGATTGCGTTTTAGTCCATGGGTATGAGTCCAGTCCAGTACATCA
TTTCGGTAGGATACAGTTTACGGGCGTCTAAATAGAACAAACCGGGGCGA
TATTTTCACGGCACGATTCCCTTTTCTTCTTTTCCGTGCCTAGAGCTAAA
CGCCGTTTCCATATATTTTCAGTGGACTCATTCCGAAATCTAAACCAAGC
CGGCCTGTGCAGCGCTACCGTGAACGTTGCAGTGACGGAGCAGAGATTGG
TAGAAAGGCCGGATGCACACCGGGCGAAGCTCTACACGATTGAGAGTGCC
CATGCCCCCCTCTTTGCTGTCGATGGAAAAGACATCATAAAGCGATCAGT
GGATTCTAAACGGGCCGAGCGTCAGCAGTCGAAGGTAATTTTGCGCCAGG
GTGTAGCGCCTGTAGACATTTTACAGATTCGGGCTGATTTAGCGCGGGGG
GGGGGGTAGAGGTAGGTGAGCCGGTGATAACGAGCGGCGAAAAAATGGCT
CACAGGCCACGGGTATTTTGAAGATGTACATTTTTCTCTCCTGATTTTCA
CTGAAGCAGTGAGGACGGCAAAATATGCATCGCAGACATAGCACGAAAGC
CGCAGAAGTATGATAGGGAGAATATCAATTTCTTTGGGGGTTGCCAACCA
ACAGCATCTATTTTACCATACTTTACTTCTTCGGCGATGCAACGAGTTCG
GGGCCCTTAAAAAAACGAGCTATGGAGGGGAAATCGATGCCTATGACAAG
TGCTGCTTTAGGCGAGCACATTAACACTCAAGACATATACCCGTGGGAAT
AACCTCATGGAATATCCACAGGAAGAAACTATGCTGAGCAGAACCCTGGC
TAAGATGACGAGAAGCACAGAAAACGCGGTTCAGAGCGCCATTAACAACC
CCAAGAGTATAGCATCCTGGAGGAATAATTTTGGCGGACAAGACAACAGG
CTAGCCAGGTTGAGATATTTAAACACTGGAGAAAGTTTACGATTTCGGAG
TTTTCACAACAAAATGAGGGAGGACTAGGCTGATCAAATGGAATCGAAGA
ACAAGCAAAACAAATGTACGGTACTGCAATGAGATGTATTGCGTAGTTCG
TGGATAATATTGCCTCACCTCACCAGGTATACTCTCAATGCTGGGGTGAA
GCTGGGAGGTTGCACCACGAGAAGGTCATTCGATCTTTTGGTACCATCGT
TTTTCTATGGTACGCTCTAATATATCTCTTGTTCTGCGCTGTTGCGGCAA
ACTCCGACACTGTCAGAAACCGGCCAGAGAGGGTGGCGAGTTCATCCGGA
TTTGACGCGACAGAGTTCGTGTCGCCGCTAGAAACGGATAATGGAAAGGG
GTTGTATCACCAGCACACAAATGATATAAAGAGCCGGTTATCTCCAAGGC
TGGAAGTGGATTCCACGGTCTCGGCGGCGCAGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig710:210620..213002+

>mRNA_F-serratus_M_contig710.18316.1 ID=mRNA_F-serratus_M_contig710.18316.1|Name=mRNA_F-serratus_M_contig710.18316.1|organism=Fucus serratus male|type=CDS|length=2184bp|location=Sequence derived from alignment at F-serratus_M_contig710:210620..213002+ (Fucus serratus male)
TGCTCGGTCGACTCAACAAACCTCCGTAGACAAGATCGTTTACTGAGTAT
CTGCAGCAGAAGCATGATCTTCGTGAATATGATCGCAAGAGTACGCTATC
ATTGTCTTCTGGTCGTGGTATTAATGCACTTTCTTCCCGAGTCAACACAC
GCCTTTGCTGTCACGACGGCTAGGCGGTCGTCGGCCATCAAATCGCCGCA
ACCCATGTGCCCCGACGAGCTCATCAGCCACACAGTAGGCAGCACAAGAA
ATTTTTTATATACTAAAGCCACCGATATTTATGGACCATCTCTGATGATC
CCAAAGCTTGCTAGATCGCAATCCCGATGTCATCGGGCGCTACCAAGCGT
GTTTGGACGCACCCCTAGAGAAAGTGATGGGACGGAACACACTACAAGTG
CTAGTGAACATACATTCGTCGCTTATAACTGTAGGTACAAACCTCACGAT
CAGCGGAAACAAGATGAATTTGGGCGAATCATCAACAATATCGAGTCAGG
AAGGGGGGGCGGAGGTGGCGAATTCGGATGGCTGCAAAAGTTCGGCAACG
GGAAAGCGGACATACTCGGGCTCGTGCTGTCTACGATACTCCTCATGATG
GCTGTCCCCCATGTAGGTGCTCGGTCGACTCAACAAACCTCCGTAGACAA
GATCGTTTACTGAGTATCTGCAGCAGAAGCATGATCTTCGTGAATATGAT
CGCAAGAGTACGCTATCATTGTCTTCTGGTCGTGGTATTAATGCACTTTC
TTCCCGAGTCAACACACGCCTTTGCTGTCACGACGGCTAGGCGGTCGTCG
GCCATCAAATCGCCGCAACCCATGTGCCCCGACGAGCTCATCAGCCACAC
AGTAGGCAGCACAAGAAATTTTTTATATACTAAAGCCACCGATATTTATG
GACCATCTCTGATGATCCCAAAGCTTGCTAGATCGCAATCCCGATGTCAT
CGGGCGCTACCAAGCGTGTTTGGACGCACCCCTAGAGAAAGTGATGGGAC
GGAACACACTACAAGTGCTAGTGAACATACATTCGTCGCTTATAACTGTA
GGTACAAACCTCACGATCAGCGGAAACAAGATGAATTTGGGCGAATCATC
AACAATATCGAGTCAGGAAGGGGGGGCGGAGGTGGCGAATTCGGATGGCT
GCAAAAGTTCGGCAACGGGAAAGCGGACATACTCGGGCTCGTGCTGTCTA
CGATACTCCTCATGATGGCTGTCCCCCATGTAGGCGCTACCGTGAACGTT
GCAGTGACGGAGCAGAGATTGGTAGAAAGGCCGGATGCACACCGGGCGAA
GCTCTACACGATTGAGAGTGCCCATGCCCCCCTCTTTGCTGTCGATGGAA
AAGACATCATAAAGCGATCAGTGGATTCTAAACGGGCCGAGCGTCAGCAG
TCGAAGCGCTACCGTGAACGTTGCAGTGACGGAGCAGAGATTGGTAGAAA
GGCCGGATGCACACCGGGCGAAGCTCTACACGATTGAGAGTGCCCATGCC
CCCCTCTTTGCTGTCGATGGAAAAGACATCATAAAGCGATCAGTGGATTC
TAAACGGGCCGAGCGTCAGCAGTCGAAGGAAGAAACTATGCTGAGCAGAA
CCCTGGCTAAGATGACGAGAAGCACAGAAAACGCGGTTCAGAGCGCCATT
AACAACCCCAAGAGTATAGCATCCTGGAGGAATAATTTTGGCGGACAAGA
CAACAGGCTAGCCAGGAAGAAACTATGCTGAGCAGAACCCTGGCTAAGAT
GACGAGAAGCACAGAAAACGCGGTTCAGAGCGCCATTAACAACCCCAAGA
GTATAGCATCCTGGAGGAATAATTTTGGCGGACAAGACAACAGGCTAGCC
AGAAACCGGCCAGAGAGGGTGGCGAGTTCATCCGGATTTGACGCGACAGA
GTTCGTGTCGCCGCTAGAAACGGATAATGGAAAGGGGTTGTATCACCAGC
ACACAAATGATATAAAGAGCCGGTTATCTCCAAGGCTGGAAGTGGATTCC
ACGGTCTCGGCGGCGCAGAAACCGGCCAGAGAGGGTGGCGAGTTCATCCG
GATTTGACGCGACAGAGTTCGTGTCGCCGCTAGAAACGGATAATGGAAAG
GGGTTGTATCACCAGCACACAAATGATATAAAGAGCCGGTTATCTCCAAG
GCTGGAAGTGGATTCCACGGTCTCGGCGGCGCAG
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