mRNA_F-serratus_M_contig710.18315.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig710.18315.1 vs. uniprot
Match: D8LGV9_ECTSI (FHA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV9_ECTSI) HSP 1 Score: 136 bits (342), Expect = 1.780e-28 Identity = 75/144 (52.08%), Postives = 94/144 (65.28%), Query Frame = 3
Query: 159 RRTTWGVLSLIENPPRPDVVNPESSHRPISDKVPRSIALHGESTFVGRVKKGP-QMMPQTQIFLPYISSSHCCFLLRRRPDDGAIEAVVKDTSSNGTFVNGAKLGKRNVSTLKAGDEIALYQPQGPTPLGMPIVYRLELHEQRF 587
R T WG L L+ENP +P + P+ DKVPR+I L G+ T++GR KK P QT I L YISS HCC LRR+ D G IEAVVKDTSSNGT+V+ ++ K + L A +++ALY P G T LG PI+Y LEL+EQ F
Sbjct: 8 RGTKWGKLILVENPTKPVT---QGFKGPVCDKVPRTINLQGKITYIGRGKKSPIGGATQTTIDLGYISSGHCCLSLRRK-DGGGIEAVVKDTSSNGTYVDATRVPKGSTRALTAENQVALYYPMGATALGRPILYDLELYEQEF 147
BLAST of mRNA_F-serratus_M_contig710.18315.1 vs. uniprot
Match: A0A6H5KZT7_9PHAE (FHA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZT7_9PHAE) HSP 1 Score: 112 bits (279), Expect = 2.660e-22 Identity = 65/130 (50.00%), Postives = 81/130 (62.31%), Query Frame = 3
Query: 225 ESSHRPISDKVPRSIALHG--ESTFVGRVKKGP-QMMPQTQIFLPYISSSHCCFLLRRRPDDGAIEAVVKDTSSNGTFVNGAKLGKRNVSTLKAGDEIALYQPQGPTPLGMPIVYRLELHEQRFPQAIDE 605
E R IS + R +A ++T++GR KK P QT I L YISS HCCF LRR+ D G IEAVVKDTSSNGT+V+ ++ K L +++ALY P G T LG PI+Y LEL+EQ F AI E
Sbjct: 96 ERMSRLISTHLGRQLAEESVEQNTYIGRGKKSPIGGAAQTTIDLGYISSGHCCFSLRRK-DGGGIEAVVKDTSSNGTYVDAVRVPKGTTRALTTDNQVALYYPMGATALGRPILYNLELYEQEFENAIKE 224 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig710.18315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig710.18315.1 >prot_F-serratus_M_contig710.18315.1 ID=prot_F-serratus_M_contig710.18315.1|Name=mRNA_F-serratus_M_contig710.18315.1|organism=Fucus serratus male|type=polypeptide|length=1214bp MTAPRRTTWGVLSLIENPPRPDVVNPESSHRPISDKVPRSIALHGESTFVback to top mRNA from alignment at F-serratus_M_contig710:162480..188582- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig710.18315.1 ID=mRNA_F-serratus_M_contig710.18315.1|Name=mRNA_F-serratus_M_contig710.18315.1|organism=Fucus serratus male|type=mRNA|length=26103bp|location=Sequence derived from alignment at F-serratus_M_contig710:162480..188582- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig710:162480..188582- >mRNA_F-serratus_M_contig710.18315.1 ID=mRNA_F-serratus_M_contig710.18315.1|Name=mRNA_F-serratus_M_contig710.18315.1|organism=Fucus serratus male|type=CDS|length=7284bp|location=Sequence derived from alignment at F-serratus_M_contig710:162480..188582- (Fucus serratus male)back to top |