mRNA_F-serratus_M_contig71.18313.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig71.18313.1 vs. uniprot
Match: D7FYT2_ECTSI (DUF3752 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT2_ECTSI) HSP 1 Score: 537 bits (1383), Expect = 2.690e-184 Identity = 324/498 (65.06%), Postives = 373/498 (74.90%), Query Frame = 1
Query: 1 QEAAQLLVSMLSTAPALATELAELLDALDEGESVYVDGVKDASLRSQLAAFLAALGLSAPDGEQGVEGAGKAFRCGKGGGGVLRAVADLMDGSGMVGPPPLDKEAAFDTARKVVDTLAAEEGMDSVRREVPALLEQILGGELVVLEGVGDGRIRNTLFQLFGALGLQPRRAGDGGDAGYGIPDRGFDDTEAVMKRLIAAYGGVSGRTGXXXXXXXXXXXXXXXXXXXGDGAETSAAGEPRRSPIGPAMPSAAVLAQAQRAALAYSQLETAPSXXXXXXXXXXXXXXXDAVGPSVAGKEKRVGSQRMDPQNAKRQKRQELKRAAEWEKATGVITGGQAALEKDVEADGGAREEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAPKAPKSRAELEAEAAAEELMAKHRKARGPSLVERHKLDKVSGGKVAKGAGRGRGAQHDGGTQKSFSWSREEDMESRRRLTPQMYEELVQKSQELDSKFSRSVSRNFL 1494
+EAAQLLVSML+ AP LA EL ELLDALDEGE+V+V GVKDA+LRSQLAAFL ALGL+AP G+ K+FRC GGGVLR VA LMD + P PLD+EAAF++A++VVD LA E+GM+ VR EVP LL+QILGGELV+LEG+ D R+R L LF A+GL+ R AGDGG+AGYGIPDRG++D+EAV+K++IA YGG + +G E PRR+PIGPAMPS A+LAQAQ+AA + Q +++ D GPS+AGKEKRV S+R DP AKRQKRQELKRAAEWE ATGVITGGQAAL+K EA+ G REEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAPKAPKS+AE+EAEAAAEELMAKHR+ARG SLVERH D VS K A G G DGG +KSFSWSREED E R++ TPQMYEELVQKSQELDSKFSRS+SRNFL
Sbjct: 10 EEAAQLLVSMLAAAPPLANELGELLDALDEGETVFVGGVKDATLRSQLAAFLTALGLAAPAGK-----GNKSFRCS--GGGVLRGVAALMDEQDLADPLPLDREAAFNSAKEVVDRLAGEQGMEGVREEVPGLLDQILGGELVMLEGLPDERVRAALTLLFEAIGLKSRTAGDGGEAGYGIPDRGYEDSEAVIKKVIAEYGGEQSKP---------------KDSSDDEGGENDGPA-PRRAPIGPAMPSQAMLAQAQQAAKDFVQEDSSSDDDE------------DQFGPSIAGKEKRVASERADPNRAKRQKRQELKRAAEWENATGVITGGQAALDK-AEAEVG-REEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAPKAPKSKAEMEAEAAAEELMAKHREARGASLVERHASD-VSKAKKAAGGG-------DGG-KKSFSWSREEDFEQRKKFTPQMYEELVQKSQELDSKFSRSISRNFL 461
BLAST of mRNA_F-serratus_M_contig71.18313.1 vs. uniprot
Match: A0A835YLN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN1_9STRA) HSP 1 Score: 206 bits (524), Expect = 1.120e-54 Identity = 199/551 (36.12%), Postives = 265/551 (48.09%), Query Frame = 1
Query: 4 EAAQLLVSMLSTAPALATELAELLDALDEGESVYVDGVKDASLRSQLAAFLAALGLSAPDGEQGVEGAGKAFRCGKGGGGV---LRAVADLMDGSGMVGPP--PLDKEAAFDTARKVVDTLAAEEGMDSVRREVPALLEQILGGELVVLEGVGDGRIRNTLFQLFGALGL--QPRRAGD-GGDAGYGIPDRGFDDTEAVMK----RLIAAYGGVSGRTGXXXXXXXXXXXXXXXXXXXGDGAETSAAGEPRRSP-------IGPAMPSAAVLAQAQR--AALAYSQLETAPSXXXXXXXXXXXXXXXDAVGPSVAGKEKRVGSQRMDPQNAKRQKRQELKRAAEWEKATGVITGGQAALEKDVEADGGAREEWMLVPPKSLGVLGAIKTL-QPTNRKFQTRSARGARADLHAPKA-PKSRAELEAEAAAEELMAKHRKARGPSLVERHK---LDKVS---------------------------GGKVAKGAGRGRGAQHDGGTQKSFSWSREEDMESR-RRLTPQMYEELVQKSQELDSKFSRSVSRNFL 1494
E+ QLL +ML + PAL TELA LL+A+D GE+V +DGV +A L+ LAA L LGL G + FR + G G + + L+D G+V P P D A +++V +AA EGM+ + E+PAL++Q+L GELVV+ VGD +R+ L +F ALGL Q R D G GYG+P A + + A V+ G+G +AA P SP IGP P AA+L QA + +ALA L++ S D VGPS + + R P W K T + + REEWM+VPPK+LG+LGA+KTL QPT+RKFQT S GA PKA PK++A+LE E AAEELMA+HR RGPSL + H +V+ G A G G GA G F+WSREE ME + RR+TPQ Y L++ S+ LDSKFS+ V++NF+
Sbjct: 127 ESLQLLTAMLCSFPALPTELASLLEAVDAGEAVCLDGVGNAKLKLMLAALLKHLGLE----RHGDDETSLTFRHAETGDGTPSSMSKLCSLLDHHGLVEAPVCPPDATTALAQCKELVAEMAAREGMEGIGGELPALMQQLLSGELVVVSDVGDDTLRDFLVNIFEALGLVLQTRDGDDDGASEGYGLPTSTSTAAGAAAQVEEQYIEACRQAVTLVMDTYVSASEAVAQPAATGEEAGEGG--AAAAPPETSPEPKAPRSIGPMRPPAALLEQAAQMSSALAKRPLDSDSSD--------------DDVGPSTSHVRRPA---RHRPXXXXXXXXXXXXXXXXWTKTPAAGTAAASTV----------REEWMMVPPKNLGILGALKTLAQPTSRKFQTGSKAGA-----VPKAVPKTKAQLEEERAAEELMAQHRAMRGPSLADMHSGKSKQQVAKERAQRAREEAARNQAMTAAGVQVTQLGASSAPSRGTGSGAGGSG-----FAWSREESMEQQHRRMTPQQYRALLETSKGLDSKFSKEVTKNFM 634
BLAST of mRNA_F-serratus_M_contig71.18313.1 vs. uniprot
Match: A0A7S2UYI6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYI6_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 3.330e-11 Identity = 55/150 (36.67%), Postives = 85/150 (56.67%), Query Frame = 1
Query: 1057 WMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAPKAPKSRAEL----EAEAAAEELMAKHRKARGPSLVERHKLDKVSGGKVAKGAGRGRGAQHDGGTQKSFSWSREEDMESRRRLTPQMYEELVQKSQELDSKFSRSVSRNFL 1494
WML P + L + + PTNR FQTRS RG +A + A + K + ++ E E A E + K +KARGPSL ++H+ + KG + + + W+R+ D+E +R++ P M +EL+QK++ LD+KFSRSV +FL
Sbjct: 1 WMLTPGEKLS---GLNKMVPTNRTFQTRSQRGNQAAV-AEQDEKRQVQVPHDPEREQAMAEAIEKAKKARGPSLYDKHQEKMDQKMQSRKGISKLKPLSS------AVGWNRDTDLEVKRQVDPSMAQELIQKAKLLDTKFSRSVQGSFL 140 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig71.18313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig71.18313.1 >prot_F-serratus_M_contig71.18313.1 ID=prot_F-serratus_M_contig71.18313.1|Name=mRNA_F-serratus_M_contig71.18313.1|organism=Fucus serratus male|type=polypeptide|length=490bp MLSTAPALATELAELLDALDEGESVYVDGVKDASLRSQLAAFLAALGLSAback to top mRNA from alignment at F-serratus_M_contig71:874314..889738- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig71.18313.1 ID=mRNA_F-serratus_M_contig71.18313.1|Name=mRNA_F-serratus_M_contig71.18313.1|organism=Fucus serratus male|type=mRNA|length=15425bp|location=Sequence derived from alignment at F-serratus_M_contig71:874314..889738- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig71:874314..889738- >mRNA_F-serratus_M_contig71.18313.1 ID=mRNA_F-serratus_M_contig71.18313.1|Name=mRNA_F-serratus_M_contig71.18313.1|organism=Fucus serratus male|type=CDS|length=2940bp|location=Sequence derived from alignment at F-serratus_M_contig71:874314..889738- (Fucus serratus male)back to top |