mRNA_F-serratus_M_contig71.18312.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig71.18312.1 vs. uniprot
Match: D7FYS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS2_ECTSI) HSP 1 Score: 364 bits (935), Expect = 2.350e-106 Identity = 209/428 (48.83%), Postives = 272/428 (63.55%), Query Frame = 3
Query: 135 VKAELRGFPGTRHCRSRLKKIFCHEWVQQEYHNGISMGQIDPTMPPMEFLRRRMGSGRLYALLLEDSKDYLRPGVYADTDVELVGTHFAHALIAQEVEKVHALQMPRVDADGAAGGSNKWKPDAGVSDPKAVTAAALGHDLPSGVMRTAGGNGGSSCSKGGSHGVSWAEHLRNFQMDVPTT-TYDLTCSDETEDVGVGVDGAGARRTGETDRGVGVVGGKGSDVDVVEWDGRGVDASVVIQHRRRFDARCCAYEALNNASRNDKTSIVLERAQRLHQDHAAIITAKRATLEGTLENVRSQLLGREDQLQQLRMEQSHINPMDGASIAACAESEAAILSRITEKKLQMSMILEEASKVVDWERTVELAWREAMQRAADVHGHGGASAAEATREKNDLVQAMMSQKATIVLLTTLCKIPGPWVAPNGHVR 1415
+K L F GTR+ RSRLK+ HEW +QEY GI++GQ+D M MEF+RRR+ G LYALL ++S+DYLR G + D DVEL+G FA A ++E+ A P+ D SG A G + ++GG SWA+ LR+FQ+D+P + TYD SD + GA R G+ GG + D WDG GVDA+ VI+HRR+FD RC AYEALN ASRNDKT+ +LE+ RL QDHAAI+ AKR TLEGTL+NVR QL GREDQL+ + MEQ +NP+D +A ESEAAI++R+ EKK+QM+MI++EA+KVV WE+T ELA REAM AAD+HGHGG A + +E+N+LVQ+MMSQK I+LL+T CK+ GPW+AP+G+VR
Sbjct: 1 MKTVLPEFQGTRYARSRLKQTLAHEWARQEYRTGIALGQVDRGMTEMEFVRRRVEGGSLYALLEQESRDYLRVGPFTDADVELLGMSFAQAQASKELPPPAAA--PKPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGKDAAAAKAG--AAAEGGV--ASWADRLRDFQIDIPASATYDGLASDSSRG-----GGAADRTDGQVVAEAAQKGGSQQEDDASAWDGIGVDAATVIRHRRQFDLRCRAYEALNTASRNDKTNGLLEKTHRLRQDHAAIVAAKRVTLEGTLQNVRQQLNGREDQLRHVHMEQRGVNPLDTTVVAGLNESEAAIMTRVAEKKVQMAMIIDEANKVVQWEQTAELARREAMHHAADMHGHGGGFAPGSAKERNELVQSMMSQKVNIMLLSTFCKLRGPWLAPSGYVR 417 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig71.18312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig71.18312.1 >prot_F-serratus_M_contig71.18312.1 ID=prot_F-serratus_M_contig71.18312.1|Name=mRNA_F-serratus_M_contig71.18312.1|organism=Fucus serratus male|type=polypeptide|length=808bp MGQIDPTMPPMEFLRRRMGSGRLYALLLEDSKDYLRPGVYADTDVELVGTback to top mRNA from alignment at F-serratus_M_contig71:857277..871415+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig71.18312.1 ID=mRNA_F-serratus_M_contig71.18312.1|Name=mRNA_F-serratus_M_contig71.18312.1|organism=Fucus serratus male|type=mRNA|length=14139bp|location=Sequence derived from alignment at F-serratus_M_contig71:857277..871415+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig71:857277..871415+ >mRNA_F-serratus_M_contig71.18312.1 ID=mRNA_F-serratus_M_contig71.18312.1|Name=mRNA_F-serratus_M_contig71.18312.1|organism=Fucus serratus male|type=CDS|length=4848bp|location=Sequence derived from alignment at F-serratus_M_contig71:857277..871415+ (Fucus serratus male)back to top |