mRNA_F-serratus_M_contig71.18309.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig71.18309.1
Unique NamemRNA_F-serratus_M_contig71.18309.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: D7FYS0_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS0_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 1.680e-69
Identity = 110/147 (74.83%), Postives = 133/147 (90.48%), Query Frame = 2
Query:  305 SDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
            +++++ AELGAISF +PGLV++LR+GSQPRKF VLLPALD +G PV+HKVDP DADSD+LSR++QGR+G MF L++REPT+ +GNYRLNFHGRVTVPS KN QLVSPDD  HTVCQFGKVG+DRFHLDYR+P+NAFQA CIS+AQFN
Sbjct:  447 TNDQEVAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDALHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFN 593          
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A835Z9X0_9STRA (Tubby C-terminal-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X0_9STRA)

HSP 1 Score: 191 bits (484), Expect = 4.040e-54
Identity = 88/150 (58.67%), Postives = 115/150 (76.67%), Query Frame = 2
Query:  296 VYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
            +Y +D++K  ELGA+ F +PGLV+++ EGSQPRKF+VLLP +D +  P+ HKVDP D    ++  ++  R G MF L+T++P F  GNYRLNF GRVTVPS KN QLV+PDD  + V QFGKVG DRFHLD+R+P+NAFQAF I+L+QFN
Sbjct:   81 IYTNDQEKE-ELGAVLFEKPGLVDHVMEGSQPRKFYVLLPPIDADSTPIPHKVDPYDPQGPMVELLKARRTGKMFLLQTKDPVFENGNYRLNFRGRVTVPSVKNFQLVAPDDVDYIVGQFGKVGDDRFHLDFRAPLNAFQAFAIALSQFN 229          
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A7S2V188_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V188_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.150e-54
Identity = 89/151 (58.94%), Postives = 115/151 (76.16%), Query Frame = 2
Query:  293 VVYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
            ++Y +D ++  E+GAI F +PG V+ ++EGSQPRK  VLLP LD +GVPV +K +P   D+ LL R+R  + G MF L+T++P F +GNYRLNFHGRVTV S KN QL SPDD  + VCQFGKV +DRFHLDYR+P+NAFQAF ++L QFN
Sbjct:   59 IIYTNDAERE-EMGAIIFNKPGFVDQVKEGSQPRKLHVLLPQLDADGVPVPNKPNPRRPDTSLLERLRSAKTGKMFCLQTKDPVFEKGNYRLNFHGRVTVASVKNFQLCSPDDIDYVVCQFGKVDEDRFHLDYRAPLNAFQAFALALVQFN 208          
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A7S3YIB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB9_HETAK)

HSP 1 Score: 179 bits (453), Expect = 2.340e-49
Identity = 83/151 (54.97%), Postives = 115/151 (76.16%), Query Frame = 2
Query:  293 VVYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
            V++ +D +K  ELGAI+F + G ++ ++EGSQPRK  ++LP LD +G+P+ +K +    ++ LLSR++ G+ G MF  ++++P F +GNYRLNFHGRVTV S KN QLVSPDD  + VCQFGKV +DRFHLDYR+P NAFQAF ++L QFN
Sbjct:   96 VIFTNDHEKE-ELGAITFEKTGFMDQVKEGSQPRKLKIILPQLDPDGIPLPNKPERGRPETSLLSRVKIGQTGRMFYFESKDPVFEKGNYRLNFHGRVTVASVKNFQLVSPDDIDYVVCQFGKVDEDRFHLDYRAPFNAFQAFAVTLCQFN 245          
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A812Y244_SYMMI (Tulp3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y244_SYMMI)

HSP 1 Score: 155 bits (391), Expect = 1.670e-41
Identity = 73/141 (51.77%), Postives = 97/141 (68.79%), Query Frame = 2
Query:  326 ELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDA-DSDLLSRIRQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
            E+ AI F R GLV+ +++G QPRK  VLLP LD E  PV H+ +        ++  +++     MF L ++EP +  GNYRLNFHGRV+VPS KN QL SPDD  H +CQFGK+G DRFHLDY++P+NAFQAF ++L  F+
Sbjct:   14 EVAAIVFDRVGLVSQIKDGCQPRKMSVLLPQLDAESHPVPHRTENKHGVKKSMVDMLKRDDTSRMFLLASKEPVYENGNYRLNFHGRVSVPSVKNFQLSSPDDPGHVICQFGKIGDDRFHLDYKAPLNAFQAFSLALCHFD 154          
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A7S2GC62_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC62_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.420e-41
Identity = 76/156 (48.72%), Postives = 107/156 (68.59%), Query Frame = 2
Query:  284 MSGVVYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYG-GMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFNH 748
            +  V+Y ++E K  E+GA+ FA+P +++++R+G+QPRK  V+LP  D   +P+  K    D  + LL +++  +   G   L+ +EP F  GNYRLNFHGRVTVPS KN QLV P D    +CQFGKV  DRFHLD++ P+N FQAFC++LAQFN+
Sbjct:   93 IENVMYNNEEVKD-EIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 247          
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A7S2D0G1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D0G1_9STRA)

HSP 1 Score: 157 bits (397), Expect = 5.050e-39
Identity = 76/156 (48.72%), Postives = 107/156 (68.59%), Query Frame = 2
Query:  284 MSGVVYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYG-GMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFNH 748
            +  V+Y ++E K  E+GA+ FA+P +++++R+G+QPRK  V+LP  D   +P+  K    D  + LL +++  +   G   L+ +EP F  GNYRLNFHGRVTVPS KN QLV P D    +CQFGKV  DRFHLD++ P+N FQAFC++LAQFN+
Sbjct:  312 IENVMYNNEEVKD-EIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 466          
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A7S2H5B0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H5B0_9STRA)

HSP 1 Score: 150 bits (380), Expect = 6.220e-37
Identity = 73/156 (46.79%), Postives = 105/156 (67.31%), Query Frame = 2
Query:  284 MSGVVYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYG-GMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFNH 748
            +  V+Y ++EKK  E+G + F +P +++++R+G+QPRK  +++P ++ +  P+   V   D    LL++I+      G    + +EP F  GNYRLNF GRVTVPS KN QLVS DD +   CQFGKV  DRFHLD++ P+NAFQAFC+ LAQFN+
Sbjct:  274 IENVMYNNEEKKQ-EVGGVMFMKPSIMDHMRDGAQPRKLKLIVPPINEKNCPIPQPVKFNDPYGGLLAQIQVDEIEQGCSVFERKEPVFENGNYRLNFRGRVTVPSVKNFQLVSTDDVSDIKCQFGKVADDRFHLDFKHPMNAFQAFCVCLAQFNY 428          
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A482S955_9ARCH (Tub domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S955_9ARCH)

HSP 1 Score: 114 bits (285), Expect = 2.930e-25
Identity = 65/148 (43.92%), Postives = 90/148 (60.81%), Query Frame = 2
Query:  326 ELGAISFARPGLVNYLREGSQPRKFFVLLPALDI-----EGVPVSHKVDPLDADSDLLSRI---RQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
            EL  +SF +  L+N L EG+QPRK  +L+   D+     EGV  S+   P  + SDLL  +   ++     M  L+T+EP    GNYRLNF GRV +PS KN Q+V   +    +CQFGKV +D FHLD+++P NA +AF ++L QFN
Sbjct:  105 ELMGVSFEKMTLINQLTEGTQPRKMRILILRPDVVTGTTEGVYPSNFGSP--SLSDLLLDVVDRKKSLPENMMLLETKEPVLENGNYRLNFFGRVNLPSVKNFQIVHYSNIDEILCQFGKVEEDMFHLDFKTPFNALEAFALALCQFN 250          
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A1W0A956_9STRA (Tub domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A956_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.170e-22
Identity = 63/152 (41.45%), Postives = 87/152 (57.24%), Query Frame = 2
Query:  296 VYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEG--VPVSHKVDPLDADSDLLSRIRQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
            V  S +++  ELGAI+F            S+PRK  V+ P L  +G    V  KVD     S L+ +++ G+   +  L+ +EP + +G YRLNF+GRV+VPS KN QLV    +   + QFGKV    FHLD+R P+  FQAF I+L QFN
Sbjct:  206 VMISSQEEKRELGAITFETKS------SHSKPRKLTVICPGLTKDGDAKSVPSKVDSF---SSLVEQLKLGQTSDLIVLENKEPEYEKGCYRLNFNGRVSVPSVKNFQLVLRGTKQGVILQFGKVSDKLFHLDFRHPLTPFQAFAIALCQFN 348          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS0_ECTSI1.680e-6974.83Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z9X0_9STRA4.040e-5458.67Tubby C-terminal-like domain-containing protein n=... [more]
A0A7S2V188_9STRA4.150e-5458.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3YIB9_HETAK2.340e-4954.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A812Y244_SYMMI1.670e-4151.77Tulp3 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S2GC62_9STRA3.420e-4148.72Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2D0G1_9STRA5.050e-3948.72Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2H5B0_9STRA6.220e-3746.79Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A482S955_9ARCH2.930e-2543.92Tub domain-containing protein (Fragment) n=1 Tax=a... [more]
A0A1W0A956_9STRA1.170e-2241.45Tub domain-containing protein n=1 Tax=Thraustothec... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig71contigF-serratus_M_contig71:811598..814052 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score242.3
Seed ortholog evalue1.5e-61
Seed eggNOG ortholog2880.D7FYS0
KEGG koko:K19600
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphatidylinositol binding
EggNOG OGsKOG2502@1,KOG2502@2759
Ec32 ortholog descriptionTubby C-terminal-like domain
Ec32 orthologEc-19_002290.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons4
Model size1490
Cds size468
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig71.18309.1prot_F-serratus_M_contig71.18309.1Fucus serratus malepolypeptideF-serratus_M_contig71 811894..813313 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932184.1991487-UTR-F-serratus_M_contig71:811597..8118401622932184.1991487-UTR-F-serratus_M_contig71:811597..811840Fucus serratus maleUTRF-serratus_M_contig71 811598..811840 +
1690964188.426758-UTR-F-serratus_M_contig71:811597..8118401690964188.426758-UTR-F-serratus_M_contig71:811597..811840Fucus serratus maleUTRF-serratus_M_contig71 811598..811840 +
1622932184.217337-UTR-F-serratus_M_contig71:811853..8118931622932184.217337-UTR-F-serratus_M_contig71:811853..811893Fucus serratus maleUTRF-serratus_M_contig71 811854..811893 +
1690964188.4383273-UTR-F-serratus_M_contig71:811853..8118931690964188.4383273-UTR-F-serratus_M_contig71:811853..811893Fucus serratus maleUTRF-serratus_M_contig71 811854..811893 +
1622932184.3219562-UTR-F-serratus_M_contig71:813313..8140521622932184.3219562-UTR-F-serratus_M_contig71:813313..814052Fucus serratus maleUTRF-serratus_M_contig71 813314..814052 +
1690964188.4795663-UTR-F-serratus_M_contig71:813313..8140521690964188.4795663-UTR-F-serratus_M_contig71:813313..814052Fucus serratus maleUTRF-serratus_M_contig71 813314..814052 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932184.2299745-CDS-F-serratus_M_contig71:811893..8120911622932184.2299745-CDS-F-serratus_M_contig71:811893..812091Fucus serratus maleCDSF-serratus_M_contig71 811894..812091 +
1690964188.447013-CDS-F-serratus_M_contig71:811893..8120911690964188.447013-CDS-F-serratus_M_contig71:811893..812091Fucus serratus maleCDSF-serratus_M_contig71 811894..812091 +
1622932184.2628443-CDS-F-serratus_M_contig71:812553..8127331622932184.2628443-CDS-F-serratus_M_contig71:812553..812733Fucus serratus maleCDSF-serratus_M_contig71 812554..812733 +
1690964188.4576786-CDS-F-serratus_M_contig71:812553..8127331690964188.4576786-CDS-F-serratus_M_contig71:812553..812733Fucus serratus maleCDSF-serratus_M_contig71 812554..812733 +
1622932184.2846437-CDS-F-serratus_M_contig71:813223..8133131622932184.2846437-CDS-F-serratus_M_contig71:813223..813313Fucus serratus maleCDSF-serratus_M_contig71 813224..813313 +
1690964188.4689338-CDS-F-serratus_M_contig71:813223..8133131690964188.4689338-CDS-F-serratus_M_contig71:813223..813313Fucus serratus maleCDSF-serratus_M_contig71 813224..813313 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig71.18309.1

>prot_F-serratus_M_contig71.18309.1 ID=prot_F-serratus_M_contig71.18309.1|Name=mRNA_F-serratus_M_contig71.18309.1|organism=Fucus serratus male|type=polypeptide|length=156bp
MSGVVYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEG
VPVSHKVDPLDADSDLLSRIRQGRYGGMFPLKTREPTFMRGNYRLNFHGR
VTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISL
AQFNH*
back to top

mRNA from alignment at F-serratus_M_contig71:811598..814052+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig71.18309.1 ID=mRNA_F-serratus_M_contig71.18309.1|Name=mRNA_F-serratus_M_contig71.18309.1|organism=Fucus serratus male|type=mRNA|length=2455bp|location=Sequence derived from alignment at F-serratus_M_contig71:811598..814052+ (Fucus serratus male)
CGCTGGGTTGTGGCGTAAGCTATACCCTTCTGGTACGTGCTTGATGGAGT AAAATTGCTTGAGCTTGGCATCTCAACTTGAGCCGTGAGGTTGTTATTAC TACCGATTCAAAGAAACCCGCTGAGATATGTTACCATTCAAAAGTATATC ATCATTCACGCTGCTTTGGTTGCTTTCTATCTGTAAATGTTCGTATGCCC GGAAATGGGCATGGTATAGATCTGAGATAAGATAAAGataatagtaataG TAATAGTTCCGGTACTACCCTGGTGCCCTCTTTGTTGTGTGTCTGTATGT CGGGCGTGGTTTATGCTTCTGACGAGAAGAAGGCGGCGGAGCTGGGAGCG ATCTCTTTCGCAAGGCCGGGTCTTGTCAACTACCTGCGGGAAGGCAGCCA GCCCAGAAAATTCTTCGTCCTCCTCCCGGCGCTGGACATCGAGGGCGTGC CCGTTTCCCACAAAGTGGACCCTTTGGACGCCGACAGCGATCTGGTGACC AAGAAGCGGTAGCTCTCTGCTGCGCGCAGTCTCCCCCCCCCCATGGTTTC TTTCGTCGAATGCGTTGAAACATGATATGAATCATAACGTGGAATGATTC CCAAAAACTACCGGCTACCTGCTTGCTTGATCCTCCGAGTTTGACAGCAA GACGGGATTTAGGAGGAGGGAGGGGGCGGGTAAAGCTTAGTTTCGTTTCG CCTCACCGTACTATTAAAAGATGCCTTGCAACCCCCAACAAGACCCCAAC AAGCCTTGGCTGTTGTGCCGCAACCGAAGTATTAAGTGGCGGACACTCAG CTCTTGGGGGTGAAGGATCATTTGCTTTACAGCTTTAGCGTACGTTTCAA CAAAAAAAAACGCCCGAAACGTCCACTGCAACGTGTCCACGAGGCTCGCG TTCCGTCTGGCTTCCCGCTCCGGTCGCCCCTCTCCGCGCGCGAGGCTATC TCCCAGCTGTCCCGCATCAGGCAGGGCCGTTACGGGGGCATGTTCCCACT CAAGACGAGAGAGCCCACGTTCATGAGGGGGAATTACCGTCTCAATTTCC ACGGGCGTGTAACGGTGCCCTCTGCGAAAAACATTCAGTTGGTCAGCCCC GATGACGAGACGCACACCGTGTGTCAGTTTGGCAAGGTAAGGTGCGTAAA GGAGCGTGAAGGTGCGTCGGCTCGTCAAAACGTGGCGTCCTTCGATGCCG TCTTGTGTGCGATGGCGGTTGCTCATATCTGGACGCCTACTATTTGCATG GTTCGTCGATATATTTTTGTTAACACAACATGACGGGCGGGGGCTCTGTT TAAGCTTGCGGCGTTGCGCTACACACCTCGACGATGAAATGGCGCCTCGC GAGGAGGTGATGGTTCCACGAGGGTGCTGCGCGAAGCGGTTGGAAACTTG CGTACTCGAAGGAATGATACGCTGCCGATTCATCAGTCCCCCGCCTCGCC GTGTGGATCACGCTTGCTTGTGTGTGGTTCTGAGATAAAATCACCTTGAA TCCCTGCGTTTTGGCGATCATATTACTATTAATACTTTCGATAATAATCT GAACATAGCGATGGAAACAACCAACCCATGTTATAGCTCTAATACATTAT ACTGCATGGACCATGTATTCCTGCAGGTGGGCAAAGATCGGTTCCATCTG GACTATCGCTCTCCCGTCAACGCCTTTCAGGCCTTCTGCATCTCCCTCGC CCAGTTCAACCACTGAGACCAACACATTTACTCAATTTTCGGTCGCGGGA CGACCAACGACCCGATTGTCTTACTGTGCTTGCTTAAGGAAGGGAATCAT TCATCGACATCGCACCCATACTCTGCTTTAATTTTTATGCCTGACCGAGG ACGCATTTTCCTTTGCTTTTTTTTGGCGTTACTTGACCTTCCCTATTTAT TATGGTCTACCGGTAGATAGTACTGCCGCGGTGTCTCAAACCGGTTTCTC GGCAAAACTCTTGACGTAATAGAATGGCTGGTCCCTCGGGCCGTTGAATC CTATCCATTGTACTGTATTTGCAATTATTAATAGCCACAATGCAGATCAT GACGATATTTTATGTAGATACATAGCTCTATGCTACTATGATACTGGATG TACTGCATAGCTCCATACAAGATCCTTTTCATGTCGGCTCTTCTCTGTAC CTGGTGCTGTACGTGTCTTGTTTAGCACTAATTAATAGGTAATTTGATGG CAAAAATATTATTTTTCTTGGAGTTAGGGGCGCTGCTGAGGTATAGTCTA AGCCTTTTGGCAGGTGCATTTGACATTTCATCTCTTCCTCGATCAATCCC TTCAGTTCAGTACCACTGCCTTGTCATAGACACAAGATACTGTAGGTATA CGAAGTATGTGTGTATTGTGGTCATCACATATACTCGCAGATTGAGCATC ATCAGCCGGTGTGGTTTCCCAATCCTGCTCCCGGTCAGCTGAACAGTGTT AGGGG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig71:811598..814052+

>mRNA_F-serratus_M_contig71.18309.1 ID=mRNA_F-serratus_M_contig71.18309.1|Name=mRNA_F-serratus_M_contig71.18309.1|organism=Fucus serratus male|type=CDS|length=936bp|location=Sequence derived from alignment at F-serratus_M_contig71:811598..814052+ (Fucus serratus male)
ATGTCGGGCGTGGTTTATGCTTCTGACGAGAAGAAGGCGGCGGAGCTGGG
AGCGATCTCTTTCGCAAGGCCGGGTCTTGTCAACTACCTGCGGGAAGGCA
GCCAGCCCAGAAAATTCTTCGTCCTCCTCCCGGCGCTGGACATCGAGGGC
GTGCCCGTTTCCCACAAAGTGGACCCTTTGGACGCCGACAGCGATCTGAT
GTCGGGCGTGGTTTATGCTTCTGACGAGAAGAAGGCGGCGGAGCTGGGAG
CGATCTCTTTCGCAAGGCCGGGTCTTGTCAACTACCTGCGGGAAGGCAGC
CAGCCCAGAAAATTCTTCGTCCTCCTCCCGGCGCTGGACATCGAGGGCGT
GCCCGTTTCCCACAAAGTGGACCCTTTGGACGCCGACAGCGATCTGCTGT
CCCGCATCAGGCAGGGCCGTTACGGGGGCATGTTCCCACTCAAGACGAGA
GAGCCCACGTTCATGAGGGGGAATTACCGTCTCAATTTCCACGGGCGTGT
AACGGTGCCCTCTGCGAAAAACATTCAGTTGGTCAGCCCCGATGACGAGA
CGCACACCGTGTGTCAGTTTGGCAAGCTGTCCCGCATCAGGCAGGGCCGT
TACGGGGGCATGTTCCCACTCAAGACGAGAGAGCCCACGTTCATGAGGGG
GAATTACCGTCTCAATTTCCACGGGCGTGTAACGGTGCCCTCTGCGAAAA
ACATTCAGTTGGTCAGCCCCGATGACGAGACGCACACCGTGTGTCAGTTT
GGCAAGGTGGGCAAAGATCGGTTCCATCTGGACTATCGCTCTCCCGTCAA
CGCCTTTCAGGCCTTCTGCATCTCCCTCGCCCAGTTCAACCACTGAGTGG
GCAAAGATCGGTTCCATCTGGACTATCGCTCTCCCGTCAACGCCTTTCAG
GCCTTCTGCATCTCCCTCGCCCAGTTCAACCACTGA
back to top