mRNA_F-serratus_M_contig71.18303.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig71.18303.1
Unique NamemRNA_F-serratus_M_contig71.18303.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig71.18303.1 vs. uniprot
Match: D7FYS8_ECTSI (RNA binding motif and ELMO/CED-12 domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS8_ECTSI)

HSP 1 Score: 426 bits (1094), Expect = 1.990e-138
Identity = 258/520 (49.62%), Postives = 328/520 (63.08%), Query Frame = 1 
Query:  301 SSFGIAYEPLATCAKSSYNLLPKTSFVDEDQFEKQMDAEFRV----EKSVESLLQTTSCAHVPPWRGGERDKDDEILQTMEFDDSSGGISIQVPVKDMRLTPD-IQLACVKALKQLTDNYQKTGTVTQ-------QVIMHIIHFEATRFVPLFILASFWGTLLAVGGDVRYSPVKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEHHTARERERGRGGLGAGGRDGETPRDRAVREWEAIDKLRTTENSRPMEKGVGGGLRPVSIDEHSRVISTAEVLSCFRSRDLSMYKAVIVPVQPQQGRLRLFRRRPHLKISEGDKLRDEVFLIAQVHYTPGDVMHRRLIQTIYRRMTRDERASPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVSIGFTKEAVGALRRGACNSECNRRGSVMEVVHELHQAQFHAFLFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAYRSYLSSERVRKAANVVQAT 1824
            ++FGIAYEPL   ++ SY+L    +FVDED+FE++M AEFRV     +  E L   ++      +  G+   D   ++T +      G   Q  V      PD ++L   +ALKQLT +Y+  G           Q +         R +   +  +  G L  VG DVR+ PV EE XXXXXXXXXXXX                 G         ER + G  +   D    R    +EWEAID+LRT E S PMEKGVGG L+P+SID+ +R+++TAEVL  FRS+DL  +KA IVP QP + R  LFRR   L+  + ++LRDEVF++AQ+ Y P DV+HRRLIQTIYRRMT ++RA PDVGPHW+T+GFQG DP TDLNRSMG+F+L QVL+LLE Q  FA VL+R S ADVTGWPF+CVSIGFTKEA+  LRRG C +ECNRRGSV++VVHELHQAQFHAFL LCR +PATHHA+HLA VR  +  D   L+KAYR+YL  E+ R A ++V  T
Sbjct:    4 NAFGIAYEPLRGSSQKSYDLPSGPAFVDEDEFEQEMSAEFRVTVGPSRQGEILATMSNRTQADDFAEGDGTAD-ITMRTQQGVPGGNGSERQEDVNSAPFYPDGLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQSAKEIGGRSIERSLTDNAAGILEFVGEDVRHYPVTEEEXXXXXXXXXXXXRKNLVEVPEKMGTLNVPG---------EREKEGQTSIDEDESAQRALVAKEWEAIDQLRTAERSVPMEKGVGGKLQPISIDQANRLVTTAEVLGYFRSQDLCTHKAAIVPYQPPESRFGLFRRASKLRFPDAEQLRDEVFILAQIKYAPADVVHRRLIQTIYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHLLESQLGFAMVLYRLSLADVTGWPFMCVSIGFTKEALRVLRRGGCYAECNRRGSVLDVVHELHQAQFHAFLELCRTEPATHHALHLAKVRARVETDSHVLVKAYRTYLLEEKARSAVSIVDKT 513
[Close]
BLAST of mRNA_F-serratus_M_contig71.18303.1 vs. uniprot
Match: A0A836CIH2_9STRA (ELMO/CED-12 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH2_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.190e-60
Identity = 123/272 (45.22%), Postives = 165/272 (60.66%), Query Frame = 1 
Query:  985 EWEAIDKLRTTENSRPMEKGVGGGLRPVSIDEHSRVISTAEVLSCFRSRDLSMYKAVIVPVQPQQGRLRLFRRRPHLKISEGDKLRDEVFLIAQVHYTPGDVMHRRLIQTIYRRMTRDERA--SPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVSIGFTKEAVGALRRGACNSECNRR--GSVMEVVHELHQAQFHAFLFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAYRSYLSSE 1788
            EW+AID L+  E+   +      G  P        V  +  +++   S  L  +++ IVPV+   G L+     P L I + D  RDE+FLI QV Y P    HRR++QT+YR +T    A  +P+ G HW+ IGFQG DP TDLNRS G+ SL+QV+ LLE +PE AA L R+SA  V GWP +CVSIGFTKEAV ALRRGA     NR   G ++E++  +HQAQFH F+  C ++P+ HHAVHL  VR ++ K P  LLKA+  + + E
Sbjct:  301 EWQAIDTLQGAES---LASFATPGTEPQFSYTCPSVTLSEALMALRESGTLESHRSAIVPVELPSGLLKRLAV-PRLSIPDADAQRDEIFLIGQVMYNPASFSHRRMLQTVYRGLTGSSAAVCAPETGSHWDAIGFQGLDPCTDLNRSQGILSLLQVMALLEARPEVAAQLMRDSA--VHGWPLMCVSIGFTKEAVAALRRGAIYGAANRHDSGDLLEILSHVHQAQFHDFMRRCHQEPSVHHAVHLCAVRAAMEKSPEKLLKAFEQHCAKE 566
[Close]
BLAST of mRNA_F-serratus_M_contig71.18303.1 vs. uniprot
Match: A0A7S1TTY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTY8_9STRA)

HSP 1 Score: 149 bits (377), Expect = 7.380e-35
Identity = 103/275 (37.45%), Postives = 140/275 (50.91%), Query Frame = 1 
Query:  985 EWEAIDK-LRTTENSRPMEKGVGGGLRPVSIDEHSRVISTAEVLSCFRSRDLSMYKAVIVP-VQPQQGRLR-----LFRRRPHLKISEGDKLRDEVFLIAQVHYTPGDVMHRRLIQTIYRRMTRDERASPD-VGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVSIGFTKEAVGALRRGACNSECNRRGSVMEVVHELHQAQFHAFLFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAYRSYLSS 1785
            EW A+++ L     +     G+ GGLR   ++E +R+++  EV    R   L      I P V P++  L      L    P L     +  RD  FL+A+V Y P    H   ++ IY  +T    A P  VG HWE +GFQG DPRTDLNRS+G+ S++Q L  +E +   A  + R +    T WPFL VSI FTK A+ ALR GA  +ECNRR  VMEV+H+ HQA FH +     ++P T    HL        +   S+L  Y   L S
Sbjct:  254 EWAAVERDLEMAPAADGSSVGLAGGLR-APVNERTRLVTLFEVEEQLRYMRLEEAGHDIEPAVAPERSGLAALCACLSPGPPPLAFQGCNAKRDYPFLVAKVKYDPATETHSGALRAIYFHLTGV--ACPAIVGSHWEAVGFQGADPRTDLNRSLGMLSVLQALAFVEKRTAVAQRIFRLTKR--TYWPFLLVSINFTKHALDALRDGALYAECNRRAKVMEVLHDAHQAIFHRYYLKLTREPGTDGITHLNATYAECAQGVPSMLAEYLDDLKS 523
[Close]
BLAST of mRNA_F-serratus_M_contig71.18303.1 vs. uniprot
Match: A0A8J2SH64_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH64_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.060e-33
Identity = 84/196 (42.86%), Postives = 112/196 (57.14%), Query Frame = 1 
Query: 1093 ISTAEVLSCFRSRDLSMYKAVIVPVQPQQGRL--RLFRRRPHLKISEGDKLRDEVFLIAQVHYTPGDVMHRRLIQTIYRRMTRDERA--SPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVSIGFTKEAVGALRRGACNSECNRRGSVMEVVHELHQAQFHAFL 1668
            I+  E L  F+  D+S  +  I P QP Q  L  R+F+RRP LK  + +  RD VFL+A   Y P   +H R+I T++R +T   +    P +G HW  IGFQG+DPRTD+NR+M   +L+Q+L+LLE +   A  L R +      WPF C SI FT+ AV  LR G  N  CN  G V+  +HE H A F  FL
Sbjct:  377 ITYDEALRHFQGLDMSSDQGKITPTQPDQRHLLKRIFKRRPDLKAPDAE--RDFVFLVALQKYDPRVPVHWRMIHTVFRELTPKNKPVPCPTLGAHWVRIGFQGNDPRTDVNRAMRCLALLQLLHLLEKERRLAGALFRAANQGGKDWPFACTSISFTRMAVQKLRSGKLNGSCNALG-VLPALHECHAALFRDFL 569
[Close]
BLAST of mRNA_F-serratus_M_contig71.18303.1 vs. uniprot
Match: A0A7S1XMI1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMI1_9STRA)

HSP 1 Score: 124 bits (310), Expect = 2.610e-29
Identity = 68/148 (45.95%), Postives = 86/148 (58.11%), Query Frame = 1 
Query: 1345 ASPD-VGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRNSAADVTGWPFLCVSIGFTKEAVGALRRGACNSECNRRGSVMEVVHELHQAQFHAFLFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAYRSYLSS 1785
            ASP  V  HWE +GFQG DPRTDLNRS+G+ S++Q L  +E +   A  + R +    T WPFL VSI FTK A+ ALR GA  +ECNRR  VMEV+H+ HQA FH +     ++P T    HL        +   S+L  Y   L S
Sbjct:    3 ASPAIVASHWEAVGFQGADPRTDLNRSLGMLSVLQALAFVEKRTAVAQRIFRLTKR--TYWPFLLVSINFTKHALDALRDGALYAECNRRAKVMEVLHDAHQAIFHRYYLKLTREPGTDGITHLNATYAECAQGVPSMLAEYLDDLKS 148
[Close]
BLAST of mRNA_F-serratus_M_contig71.18303.1 vs. uniprot
Match: A0A7S2W6W8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6W8_9STRA)

HSP 1 Score: 127 bits (320), Expect = 4.030e-27
Identity = 87/237 (36.71%), Postives = 122/237 (51.48%), Query Frame = 1 
Query: 1096 STAEVLSCFRSRDLSMYK--AVIVPVQPQQGRLRLFRRRPHLKISEGDKLRDEVFLIAQVHYTPGDVMHRRLIQTIYRRMTRDERAS--------PDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLHRN-SAADVTGW-PFLCVSIGFTKEAVGALRRGACNSECNRRGSVMEVVHELHQAQFHAFLFLCRKKPATHHAVHLATVRTSIGK-DPGSLLKAY 1767
            S  E  + FRSR  +  +  A++      +G  RL    P L+       RD  FLIA V Y P D +H R++QT++ R+     +S        P  G HWE IGFQGHDPRTD+NRSM   +++QVL+  E  P  AA L R     D  G   F+C+SIGFT++A+ ALRRG     C ++  +++VVH+ H AQ          +P      H   +R S+ K  P  +LK +
Sbjct:  289 SYEEAETMFRSRRWTEAEVSAIVTTEGFSKGLARLLGGPPRLRFENAKTERDLCFLIACVAYDPADDVHLRMLQTVFHRLMGHNVSSTGRPIDPCPVCGAHWEQIGFQGHDPRTDVNRSMKCLAVLQVLHWAETFPITAARLCRRCKEVDQFGANTFMCLSIGFTRDALQALRRGQSYYRCVQQRKILDVVHQCHHAQCVELFKRLSAQPEVPIWEHSNALRLSMEKAGPEKVLKGF 525
[Close]
BLAST of mRNA_F-serratus_M_contig71.18303.1 vs. uniprot
Match: A0A3B3R8J3_9TELE (ELMO domain containing 3 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3R8J3_9TELE)

HSP 1 Score: 124 bits (312), Expect = 1.100e-26
Identity = 95/288 (32.99%), Postives = 143/288 (49.65%), Query Frame = 1 
Query:  976 AVREWEAIDKLRTTENSRPMEKGVGGGLRPVSIDE--HSRVISTAEVLSCFRSRDLSMYKAVIVPVQPQQGRLRL--FRRRPHLKISEGDKLRDEVFLIAQVHYTPGDVMHRRLIQTIYRRMTRDERASPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPE---FAAVLHRNSAADVTGWPFLCVSIGFTKEAVGALRRGACNSECNRRGSVMEVVHELHQAQF-HAF-LFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAYRSYLSSERVRKAANV 1812
            A  +WEA+D++                 +PV  ++   + +IS  E L  F++ DLS     I P   + G   +  F   P     E  + R+ VF IAQ     G  +H R++QTIY+R+T      P  GPHWET+GFQG DP TDL R  G   L+  LYL+ + P+    A  +++ S   V  +PF+ +SI  T+ A+ ALR    + ECNRR  V+ V++E + A F H F ++  ++K  +     L  V T   K+P  +LK   ++L   R    A+V
Sbjct:  158 AREQWEALDRI-----------------QPVLPEDVTPTPLISFNEALQHFQTTDLSELLRNIQPTLHRTGLAAITHFLFGPPRLHRELIEERNMVFAIAQCSLDNGQKVHTRVLQTIYKRLTGTRLDCPRYGPHWETVGFQGRDPATDL-RGTGFLGLMHTLYLV-MDPDTLPLALDIYKLSQHPVQNFPFVVMSINMTRIALHALREEVLSKECNRRQQVLGVLNEFYVATFLHLFQVWKFQQKTISDSGFVLKEVETFAKKNPKQILKRLETFLKETRSGSGASV 426
[Close]
BLAST of mRNA_F-serratus_M_contig71.18303.1 vs. uniprot
Match: T1JJM1_STRMM (ELMO domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JJM1_STRMM)

HSP 1 Score: 120 bits (302), Expect = 2.950e-26
Identity = 86/280 (30.71%), Postives = 143/280 (51.07%), Query Frame = 1 
Query:  970 DRAVREWEAIDKLRTTENSRPMEKGVGGGLRPVSIDEHSRVISTAEVLSCFRSRDLSMYKAVIVPVQPQQGRLRLFRR--RPHLKISEGDKLRDEVFLIAQVHYTPGDVMHRRLIQTIYRRMTRDERASPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPE---FAAVLHRNSAADVTGWPFLCVSIGFTKEAVGALRRGACNSECNRRGSVMEVVHELHQAQFHAFLFLCRKKPATHHAVH--LATVRTSIGKDPGSLLKAYRSYLSSE 1788
            ++A  EWE ++  R+  N               S   ++ +I+  +V+S F+S D+S+Y A IVPV  +     LFR    P +  S  D  R  VF IA   +   +++H R++Q+IY+ +T ++   P  G HWE IGFQG+DP TDL R +G   L+ +LY++ + P+    A  + + S  +   +PF  + I  T+  + ALR    N ECNR+ +V+ VV+E +   F     +  K   T  +    L  V +++ K P  LL+    Y++++
Sbjct:   40 EKAQTEWETVNSTRSDTNVN-------------SWPGNTEIITIDDVISHFKSADMSIYMANIVPVIERSKLASLFRLIWGPPVLDSSLDDERKLVFAIASCPFHNEEIVHLRVLQSIYKLLTNNQNDCPRYGSHWEQIGFQGNDPSTDL-RGVGFLGLLHLLYIV-MNPQTLSLARDILQLSRDEKQNFPFAVMGINLTRIVLQALREERLNKECNRKKNVILVVNEFYVGIFLHLYNIWSKNNVTIESSGFILKDVESTVKKRPKVLLRNLEDYINTK 304
[Close]
BLAST of mRNA_F-serratus_M_contig71.18303.1 vs. uniprot
Match: UPI0015AB0BD0 (ELMO domain-containing protein 3 isoform X1 n=2 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015AB0BD0)

HSP 1 Score: 121 bits (304), Expect = 7.040e-26
Identity = 93/285 (32.63%), Postives = 140/285 (49.12%), Query Frame = 1 
Query:  976 AVREWEAIDKLRTT--ENSRPMEKGVGGGLRPVSIDEHSRVISTAEVLSCFRSRDLSMYKAVIVPVQPQQGRLRLFR-----RRPHLKISEGDKLRDEVFLIAQVHYTPGDVMHRRLIQTIYRRMTRDERASPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEF---AAVLHRNSAADVTGWPFLCVSIGFTKEAVGALRRGACNSECNRRGSVMEVVHELHQAQF-HAF-LFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAYRSYLSSERV 1794
            A  +WEA++ ++    E+S P                 + +IS  E L  F++ DLS     I P   + G   +        R H +++E    RD VF IA+     G  +H R++QTIY+R+T      P  GPHWET+GFQG DP TDL R  G   L+  LYL+ + PE    A  +++ S      +PF  +S   T+ A+ ALR  A   ECNRR  V+ V++E + A F H F ++  ++K  +     L  + T   K+P  +L+   ++LS  RV
Sbjct:  116 AREQWEALESIQPVLPEDSAP-----------------TPLISFNEALQHFQTTDLSELLRDIQPTLRRTGLAAIAHFLFGPPRLHRELTEE---RDLVFAIARCSLDNGQKVHTRVLQTIYKRLTGSRADCPRYGPHWETVGFQGTDPATDL-RGTGFLGLMHTLYLV-MDPEMLPLARDIYKLSQHPTQNFPFSVMSFNITRIALHALREEALTRECNRRQQVVGVLNEFYVATFLHLFQVWKSQQKTISDSGFVLKELETFAKKNPKQILRRLEAFLSERRV 378
[Close]
BLAST of mRNA_F-serratus_M_contig71.18303.1 vs. uniprot
Match: A0A851PB06_9GALL (ELMD3 protein (Fragment) n=1 Tax=Penelope pileata TaxID=1118817 RepID=A0A851PB06_9GALL)

HSP 1 Score: 119 bits (297), Expect = 1.740e-25
Identity = 99/297 (33.33%), Postives = 139/297 (46.80%), Query Frame = 1 
Query:  976 AVREWEAIDKLRTTENSRPMEKGVGGGLRPVSIDEHSRVISTAEVLSCFRSRDLSMYKAVIVPVQPQQGRLRL--FRRRPHLKISEGDKLRDEVFLIAQVHYTPGDVMHRRLIQTIYRRMTRDERASPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYL----------LEV----QPEFAAVLHRNSAAD---VTGWPFLCVSIGFTKEAVGALRRGACNSECNRRGSVMEVVHELHQAQFHAFLFLCRKKPATHHAVH-----LATVRTSIGKDPGSLLKAYRSYLSSERV 1794
            A  EWEA++ ++T    RP       G  P+        IS  E L  F++ DLS  +  I     +QG   L  F   P     +    RD    IAQ      +V+H R++QTIY+++TR     P  G HWE +GFQG DP TDL R  G+  L+Q+LY           LE+    Q E  A   + S  D   +  +PF  +S+  T+  + ALR    + ECNRR  V+ V+++L+ A   AFL L R   A H  +      L  + +S  K P  LLK+  SY+S   V
Sbjct:   37 AQEEWEAVEDIQTVLLGRP------AGAVPL--------ISFHEALQFFQTADLSACRQKIHTTVRRQGLAALLHFLFGPPRLQQQLQGERDLALTIAQCALDDSEVVHMRILQTIYKKLTRSRLGCPRYGAHWEELGFQGVDPGTDL-RGTGMLGLMQMLYFVMDSQTLPLALEIFRLSQHETQAPPFQQSRRDAHLLQNFPFCIMSVNITRLVLQALREECLSRECNRRQQVIAVLNDLYAA---AFLQLYRVWKAQHKTIADSSFLLKELESSTKKKPKQLLKSLESYVSRSPV 315
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig71.18303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS8_ECTSI1.990e-13849.62RNA binding motif and ELMO/CED-12 domain n=1 Tax=E... [more]
A0A836CIH2_9STRA1.190e-6045.22ELMO/CED-12 family-domain-containing protein n=1 T... [more]
A0A7S1TTY8_9STRA7.380e-3537.45Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8J2SH64_9STRA1.060e-3342.86Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A7S1XMI1_9STRA2.610e-2945.95Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2W6W8_9STRA4.030e-2736.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A3B3R8J3_9TELE1.100e-2632.99ELMO domain containing 3 n=2 Tax=Paramormyrops kin... [more]
T1JJM1_STRMM2.950e-2630.71ELMO domain-containing protein n=1 Tax=Strigamia m... [more]
UPI0015AB0BD07.040e-2632.63ELMO domain-containing protein 3 isoform X1 n=2 Ta... [more]
A0A851PB06_9GALL1.740e-2533.33ELMD3 protein (Fragment) n=1 Tax=Penelope pileata ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig71contigF-serratus_M_contig71:743266..753410 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score428.7
Seed ortholog evalue4.1e-117
Seed eggNOG ortholog2880.D7FYS8
Preferred nameELMOD3
KEGG koko:K04139
KEGG Pathwayko04022,ko04080,map04022,map04080
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ELMO domain-containing protein
EggNOG OGsKOG2998@1,KOG2998@2759
Ec32 ortholog descriptionRNA binding motif and ELMO/CED-12 domain
Ec32 orthologEc-19_002370.1
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04030
Exons10
Model size2043
Cds size1656
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig71.18303.1prot_F-serratus_M_contig71.18303.1Fucus serratus malepolypeptideF-serratus_M_contig71 743560..753317 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932182.8171926-UTR-F-serratus_M_contig71:743265..7435591622932182.8171926-UTR-F-serratus_M_contig71:743265..743559Fucus serratus maleUTRF-serratus_M_contig71 743266..743559 +
1690964187.8407767-UTR-F-serratus_M_contig71:743265..7435591690964187.8407767-UTR-F-serratus_M_contig71:743265..743559Fucus serratus maleUTRF-serratus_M_contig71 743266..743559 +
1622932183.0261595-UTR-F-serratus_M_contig71:753317..7534101622932183.0261595-UTR-F-serratus_M_contig71:753317..753410Fucus serratus maleUTRF-serratus_M_contig71 753318..753410 +
1690964188.0259943-UTR-F-serratus_M_contig71:753317..7534101690964188.0259943-UTR-F-serratus_M_contig71:753317..753410Fucus serratus maleUTRF-serratus_M_contig71 753318..753410 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932182.8425071-CDS-F-serratus_M_contig71:743559..7438561622932182.8425071-CDS-F-serratus_M_contig71:743559..743856Fucus serratus maleCDSF-serratus_M_contig71 743560..743856 +
1690964187.8629038-CDS-F-serratus_M_contig71:743559..7438561690964187.8629038-CDS-F-serratus_M_contig71:743559..743856Fucus serratus maleCDSF-serratus_M_contig71 743560..743856 +
1622932182.863038-CDS-F-serratus_M_contig71:744339..7444991622932182.863038-CDS-F-serratus_M_contig71:744339..744499Fucus serratus maleCDSF-serratus_M_contig71 744340..744499 +
1690964187.8774502-CDS-F-serratus_M_contig71:744339..7444991690964187.8774502-CDS-F-serratus_M_contig71:744339..744499Fucus serratus maleCDSF-serratus_M_contig71 744340..744499 +
1622932182.8850112-CDS-F-serratus_M_contig71:750380..7505171622932182.8850112-CDS-F-serratus_M_contig71:750380..750517Fucus serratus maleCDSF-serratus_M_contig71 750381..750517 +
1690964187.8961024-CDS-F-serratus_M_contig71:750380..7505171690964187.8961024-CDS-F-serratus_M_contig71:750380..750517Fucus serratus maleCDSF-serratus_M_contig71 750381..750517 +
1622932182.900979-CDS-F-serratus_M_contig71:750577..7506941622932182.900979-CDS-F-serratus_M_contig71:750577..750694Fucus serratus maleCDSF-serratus_M_contig71 750578..750694 +
1690964187.923652-CDS-F-serratus_M_contig71:750577..7506941690964187.923652-CDS-F-serratus_M_contig71:750577..750694Fucus serratus maleCDSF-serratus_M_contig71 750578..750694 +
1622932182.9175665-CDS-F-serratus_M_contig71:750993..7511191622932182.9175665-CDS-F-serratus_M_contig71:750993..751119Fucus serratus maleCDSF-serratus_M_contig71 750994..751119 +
1690964187.9373796-CDS-F-serratus_M_contig71:750993..7511191690964187.9373796-CDS-F-serratus_M_contig71:750993..751119Fucus serratus maleCDSF-serratus_M_contig71 750994..751119 +
1622932182.939936-CDS-F-serratus_M_contig71:751384..7515191622932182.939936-CDS-F-serratus_M_contig71:751384..751519Fucus serratus maleCDSF-serratus_M_contig71 751385..751519 +
1690964187.9492235-CDS-F-serratus_M_contig71:751384..7515191690964187.9492235-CDS-F-serratus_M_contig71:751384..751519Fucus serratus maleCDSF-serratus_M_contig71 751385..751519 +
1622932182.961668-CDS-F-serratus_M_contig71:751867..7520471622932182.961668-CDS-F-serratus_M_contig71:751867..752047Fucus serratus maleCDSF-serratus_M_contig71 751868..752047 +
1690964187.9649777-CDS-F-serratus_M_contig71:751867..7520471690964187.9649777-CDS-F-serratus_M_contig71:751867..752047Fucus serratus maleCDSF-serratus_M_contig71 751868..752047 +
1622932182.9774587-CDS-F-serratus_M_contig71:752237..7523481622932182.9774587-CDS-F-serratus_M_contig71:752237..752348Fucus serratus maleCDSF-serratus_M_contig71 752238..752348 +
1690964187.9805865-CDS-F-serratus_M_contig71:752237..7523481690964187.9805865-CDS-F-serratus_M_contig71:752237..752348Fucus serratus maleCDSF-serratus_M_contig71 752238..752348 +
1622932182.9923794-CDS-F-serratus_M_contig71:752571..7527331622932182.9923794-CDS-F-serratus_M_contig71:752571..752733Fucus serratus maleCDSF-serratus_M_contig71 752572..752733 +
1690964187.9945016-CDS-F-serratus_M_contig71:752571..7527331690964187.9945016-CDS-F-serratus_M_contig71:752571..752733Fucus serratus maleCDSF-serratus_M_contig71 752572..752733 +
1622932183.0110078-CDS-F-serratus_M_contig71:753086..7533171622932183.0110078-CDS-F-serratus_M_contig71:753086..753317Fucus serratus maleCDSF-serratus_M_contig71 753087..753317 +
1690964188.0060415-CDS-F-serratus_M_contig71:753086..7533171690964188.0060415-CDS-F-serratus_M_contig71:753086..753317Fucus serratus maleCDSF-serratus_M_contig71 753087..753317 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig71.18303.1

>prot_F-serratus_M_contig71.18303.1 ID=prot_F-serratus_M_contig71.18303.1|Name=mRNA_F-serratus_M_contig71.18303.1|organism=Fucus serratus male|type=polypeptide|length=552bp
MDSSFGIAYEPLATCAKSSYNLLPKTSFVDEDQFEKQMDAEFRVEKSVES
LLQTTSCAHVPPWRGGERDKDDEILQTMEFDDSSGGISIQVPVKDMRLTP
DIQLACVKALKQLTDNYQKTGTVTQQVIMHIIHFEATRFVPLFILASFWG
TLLAVGGDVRYSPVKEEEEEEEEEEEEEEEEEEEEEEEEENDEGKEDGGE
HHTARERERGRGGLGAGGRDGETPRDRAVREWEAIDKLRTTENSRPMEKG
VGGGLRPVSIDEHSRVISTAEVLSCFRSRDLSMYKAVIVPVQPQQGRLRL
FRRRPHLKISEGDKLRDEVFLIAQVHYTPGDVMHRRLIQTIYRRMTRDER
ASPDVGPHWETIGFQGHDPRTDLNRSMGVFSLVQVLYLLEVQPEFAAVLH
RNSAADVTGWPFLCVSIGFTKEAVGALRRGACNSECNRRGSVMEVVHELH
QAQFHAFLFLCRKKPATHHAVHLATVRTSIGKDPGSLLKAYRSYLSSERV
RKAANVVQATCRWQGREHLNFGTNRAVGDKQRAVLSARQLRYVTTDEQEG
S*
back to top

mRNA from alignment at F-serratus_M_contig71:743266..753410+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig71.18303.1 ID=mRNA_F-serratus_M_contig71.18303.1|Name=mRNA_F-serratus_M_contig71.18303.1|organism=Fucus serratus male|type=mRNA|length=10145bp|location=Sequence derived from alignment at F-serratus_M_contig71:743266..753410+ (Fucus serratus male)
GGCGACGTCGAGCTCATCAACCAAAACATTACCCGAAGCGAACACGACAA
AGCTTCCTCGGATCCTCCTACCAGTACCCCAAATGCGAAGAACGACAGCA
ACAAAACTCGTCACCCACTTTCTAGTCGCGTTGAGGCTACCAAGCTTGGA
GCTGGAGTCGATCCCGAGCGTGTGGAAGCCCTCGTGTTGGGTGGAATCGC
GATCGATCTGCAACCGGTGCCAGGACAGTCGGAGGCCGATCCCCCAGGGA
AGGAATTAGTTTCACGCGATATCGTGGAGCTCGACGAACAGAATATGGAC
TCTTCCTTCGGGATCGCTTACGAGCCCCTTGCTACCTGTGCCAAGTCATC
GTACAATCTTCTACCTAAAACCTCTTTCGTCGATGAAGATCAATTCGAGA
AACAGATGGACGCGGAATTTCGCGTCGAGAAATCCGTTGAAAGTCTGCTC
CAGACAACAAGCTGTGCTCATGTTCCACCTTGGAGAGGCGGTGAACGTGA
TAAGGACGATGAAATTCTACAAACCATGGAATTTGACGACTCCTCCGGCG
GCATTTCGATCCAAGTTCCAGTCAAAGATATGAGGCTGACGGTGTTCAAA
AGACTGTCGAAGGTACTTCAATTTATTAGGGAAAATATAGATCTGGCTTT
CTAGTACTTATATACCAGGTATGATACATTTACTACGAAGTTCGAGGTAA
ATGTATTAATCTTATCTTACGGCATGACTACCACCTACCAGGTACTACAG
ATTAGTAAATTCAAAAGAAAAAATTGAACGCATCTACAGTAGACCTTTTG
AGCATCCCCCAGTCACGGGGGGGGGATGTCAAAACGTTTAGGTGGAATCA
TATAGACTGCAAAGGCAAAATCTCTTCATGACATTGTCGCATCTATGCAA
GCACGATCAAGACCTGTGACCGGTTTGGTAATGAAGCCAACACCATCATC
GTGACACCTTTCCTCTCCCTTTTTCCACCAGGCGTCAGGTCATGTCCCAC
AAATTCATAACACCGTGAGCTGTACGATAAACCAATCGAGCGGTTCGGGG
ACGGAGCAAAACCCGTGCCCAAAGCCGGACATTCAACTTGCGTGTGTGAA
AGCGCTCAAGCAGCTAACGGACAATTACCAGAAAACAGGAACAGTAACGC
AGCAGGTAATAATGCATATTATCCATTTCGAAGCAACAAGATTCGTTCCT
CTCTTCATACTCGCCTCCTTTTGGGGAACCTTGCGTCGTCTGGTCTTGAG
TGGATACCAGTGACAGACTATAAATCAGTACACAAGCACCAAAAATAAGA
TACAGAACGACCGGCAACAACAGCCAAATGTGGTGCGCGCTCCGCGCAGA
AACATCAAACATGAGCAGCGACGCCAGACCATGCGTAGGGGCATTATAGG
GCAAAAATTGTTTCCACCCAGAGCGTAGGGGCATTATAGGGCAAAAATTA
TTTCCACCCAGAAGGGTGGAAATAAGGGTACACCCAGGCCCTTTGCTATC
TATCGTAATTAACAGTGTAATTAACAGCCTGTACTTCTGACGTGGGATGT
GTTGTGTCTTGTCTTTTTTTTTACCTCACTTCCTTGTTGTGTTGTGTCTT
GTCTTTTTTTTTTTTTACCTAACCCTAACCCTAACCCTAACCCTAACCCT
AACCCAACGCGACACACAGCTGCCCAAGAAGGTGGGGTAAAAAAAAAAAA
GACAAGACACAACACTGTTGATTACACTGTTAATTACAATAGCAAAGGGC
CTGGGTGTACCCTTATTTCCATCCTTCTGGGTGGATTTAATAAGGGCAAT
GGCCAAAAACGGGAGCTCCCGGTGCTTTCTTGGCCAAAAACGGGTGTACC
CAGAAACAATAGCGGCAGAGAGTGTTGTTGGCCGTATCTGATTGGCCAGC
ACCCACTTTCTCCCGTTTTGGGCCATAAGCTACCGGGTACTCCCGGTAAT
ATCTACTTCGCTCAGCTTCCACCCGTTTTTGGCCATTTTTTGTTGGCTTT
TGTTCCGCCACAAGAACAATTAAGGGACGAAATTTCGACCAGGTGAACTT
GAAATTGACAAAGGCCGTTGACAAACAATTGGGGCCAACAATTTTTCTGT
ATCCCCCGTCCACCATTATACCCCCGCGGAAGCCTACCAGCCCGTCAAAG
TCTCGATGGAAGAAGGGCCATGGAAGAACGAAGAGGCAATGTTCCCATCT
AAACATGGACCTCTAAACATTCCCTGCTCTTCACTCGTGCCCTCTCTCCC
TCCGAAGCCTGGTTTCGGGGTATGAGTGTGGGAGGGTCTTTCCGGCGGGT
GTAGGGCCGGACTCACCCTCAAGAGGTGCAGCCAACTGGCTGCCTTCGCG
ATTCAGCCTGTAGGTTGGGACGCGGCGGCGGTATGGTTGGCTGAAGATGA
TGGTGTTCCCAGGTGTGCGCCTCTTCCGAGCCTCAATTTGGTGGCTTTCG
GGAGGGTGGCGGCACGCGAGAGGCAGGGAGCACTGTCGCGGAGAGCCTGG
TAGTGCTCTACCGGGTGGGTACGCACCAGATTTGGCGAAGGCGGAGGGCA
GCTCGATCGTTGACGAGCCAGGGGAGGGCCGAACCCTGTGCGCGAGAATC
ACAGGCGCGAACCGGGAGGTTTCTTAGGAAAAGCTGACATCTGACCACAC
GGTTATTTGTCTTCCTACGAGGGCCATAAGGAGCGGCGAACGGGCAAGAT
TCGTGGGACTTTTTCCAGGGATGCACAGGGCTTCGGACGGCTGGATACTG
GCTCGCGCGCCGGCCTCACCAGCTCAAGGCCTCCACCACCACCATGGACC
TCGGTGATTCAATTTTTCTTATTTCTGTAGATTGAGTGGCCTTGAGAAAC
TTGGAATTTTGTTGATCAAAACTGGTTGGAGCGTAATTCTTCCGGTTTTT
GCTGAGAACGCTGGTCGTGGGTAGGCGATAACAATCCGAGTCGATCGAGG
TTGCTCTCGATATGGAATAAGGATGTTTGATGAACCGTTTTGTTTGGTCG
GTGCCATTGCTTGTAGAGTCGCATGACTTTTTGTCGCGATTTGGATCCCT
GTTGGTCTGAGTAGCGGGTTGTCACCATGATGTGCACCGTTGACCTTTGC
ACCTCTTTGTGACCACGTACCGGATTGGCAACCGCGTACATTACTAGGTA
TGGTTGAGGCCCGATCGGTTAATGTGAAGAATACTACTACTACTACTACT
ACAAGAGGTTTGTTTGCCACCACATTCAGAATTTTGTTTGGGGAATGACA
GGGCTGACGCGGGACGGAACCGCCGCACCTGTCCGGCGGGACGACATTCT
CTGGCTGGAACTAGAACAGGAAATGTGTCATTTTCTCTTAACGGGGCCCC
ACACATGGACGACCAAGTTAACCGCTCAATAAAACTCGCAATAACACGTT
CTGATTTTTCTTTAAACACGTATCTTGTTTTGGAGTATGGGCACCATACA
ACGCAAATGTTCTCACATAATTTGTATAAGGGTATAACTCAGGCGCACAG
ACGATATAGACGTAGACGTGGGGAGTATTTTGGAGCATCCACAATAACAC
ACAAACCGTTATATACAACGATTATTACCGTCTTCCCTCTGTTGTCCTAC
AGCAGCAGTAGTTTTGTACACACTTTGATACCATACACCATACTAAACAG
TCCAAAGCCTTAATTTTTACATATTTTTTGTAGCTGCTTATGATACCTTA
CTATTAATAATAAGAAACTATTAATAGTAAGGGCCTAATAGTAACCCTAT
TTCATCTACCAACAAATCGGTCTTATTATTACTGTACGAGTACGTACTGT
ATGTTAAGAAAGGAACGCAATCTAGACCTTCTAAGCACCCCCCAGTGAGA
GGGGAACATGTCACAACGTTTTGGTGGGATCACAGGCTGCAAAGACACAA
ACGGGTTTCCCGTTGACGGTAACATTGGGTCAACATTATAATGGGGAGAA
GAAGCCCGCTGTTAGACTGGACACTTGCAGTAATACCGGTAGGTTATTCC
TATGTATGTATGGTCAACACTTTCAGCAGATAATGATGGATCCCATAATG
ATATGGATCAACCGAGTTCGTTGCCAGGACATCATCTTAACGGGGCCCCA
CACACTTTTTTCAAACAAATGATTAGCTCAGATTTTTCTAAAAAATACAG
GACTGTCATCCAATAATCCAAGCTCGGGTACTGTTTATAATGGAGTGAAT
AAGGGAGTGTTTTGCCTCAGAAAGTACAATTTTGGTATCAGCATGTGACA
ATCGCCGCAACCAGCTGTGGTGCATCGACATGTTCCAAACGTAAGAGTGC
ATAGTCACGTATCGTAAAAGGTTTGTACATTTGGGCTTCGAAGGTCATGT
ATAGGTTCGGCGGCCGACTTTTGGTGGTTTTGTGTAAACCCGGGAATAAT
CCAACCGCAAATGCCACAGAAGGTGACTACACCAATGTAGACAACTTTCT
TCGGCTAAGTGGCATGTAGAAGGTTGCCCTCTTCGGAGGGTGCTCCAGCA
AGGTCTTAGGAGGTCTTCTGCGCAAAACCGCGGTCTCGGGGGCGGTGTCA
GGCTCAAGAGCGGAGAACCTACTGATGTCCTTACTGCTGCTGCTGCTGCA
GCTGTAGCCCTAGATCGGAAAAAGCCCACCGAGAAGTCGGCCGCCGAACC
TATACATGACAGTCCTGTATTTTTTAGAAAAATCTGAGCTAATCATTTGT
TTGAAAAAAGTGTGTGGGGCCCCGTTAAGAGAAAATGACACATTTCCTGT
TCTAGTTCCAGCCAGAGAATGTCGTCCCGCCGGACAGGTGCGGCGGTTCC
GTCCCGCGTCAGCCCTGTCATTCCCCAAACAAAATTCTGAATGTGGTGGC
AAACAAACCTCTTGTGAAGAGCAGGGAATGTTTAGAGGTCCATGTTTAGA
TGGGAACATTGCCTCTTCGTTCTTCCATGGCCCTTCTTCCATCGAGACTT
TGGCGGGCTGGTAGGCTTCCGCGGGGGTATAATGGTGGACGGGGGGATAC
AGAAAAATTGTTGGCCCCAATTGTTTGTCAACGGCCTTTGTCAATTTCAA
GTTCACCTGGTCGAAATTTCGTCCCTTAATTGTTCTTGTGGCGGAACAAA
AGCCAACAAAAAATGGCCAAAAACGGGTGGAAGCTGAGCGAAGTAGATAT
TACCGGGAGTACCCGGTAGCTTATGGCCCAAAACGGGAGAAAGTGGGTGC
TGGCCAATCAGATACGGCCAACAACACTCTCTGCCGCTATTGTTTCTGGG
TACACCCGTTTTTGGCCAAGAAAGCACCGGGAGCTCTTCCGTTTTTGGCC
AGTGTAATTAACAGCCTGCCCAGGTGGGATCAAAGGCTGCAAATACAAAA
CCTCTTCATGGCAATATAAACGGGTTCCCCTATGGTAGTAACGTTGGGTC
AACAGTATAATGTCGGTAGAAACCCACCGTTAAATAAACTGTACACTTAC
AATAAACGCCATGCAGGGACACCAGAAAAACAGCAACACCAGAAAAACAG
CAACAAACAAAATAATGTAGTGACTCATCAGACATGGTGGTGGTGATAAT
ATACTTATTACCTAGCTAGGTTATGGTGATAATATATTTGTTACCCAGGT
TTTAAGGGCGACAACATTACATATTATTTTAAACGGGTTCCCTAATGGTA
GTAACCATGGGTCAATAATATAATATCGAGGAGAATACCACCGTTATACT
GTACACTTATATTAATCGTCATGCAAAGCCTTCACACATAACGAAACATA
GGGCAACCATAAATTGTCGGGGAGAAACACATTATTAGCAGTAAAAGCAT
AACATGTTTATAATGCGTGCACAAATAGTACAATACTGTACAATACCCAA
GGCCACTATATGACATTAATCACCATCTGGATCCATTCAGAACATAGCAC
AGCAAAGGATACTCTAGCTAACCCTAACCCAACGCGACACACAGCTGCCC
AAGGAGGTGGGGTAAAAAAAAAAGACGAGACATAACACTTTTTATTTTAT
TTTATTTACCTAACTGAACCCTAACCCAACGCGACACACAGCTGCCCAAG
GAGGTGGGGTAAAAAAAAAAGACGAGACACAACACAACACTGTTAACTAC
ACTGTTAATTACAATAGCAACGGGCCTGGGTGTACCCTTATTTCTTATTT
CCACCCATCTGGGTGGATTTAATAATTTCGCTCGAGGTAAAATCCGAACA
GCACCTAGACTTTTTGAGCATCCCCCGTAGGGGGAGGAAATGTCAAAACG
TTTAGGCGGGGTCAAAGGCTGCAGTGACAAAAACCTCTTCATGGTATTAA
ACAGGTTACCCAATGTATATAACATTGGGTCAACAGTAGTTGTTAATTTC
CAATTTTGGAAAGTTTGGAAATTTTGAAAGTTTTGAAAGTCTGAAAGTTT
TGAAAGTTGGAAAGTGTGGACTGATTCGTGGTATTCAAACGTTTCCTAGG
CGTATCAAAATTGCCAGAGCGGGGACGCCTTTTTCCGAGCTCGTATTACC
ATTTGTGCGAAAGGATCTTTAGGGGGTAATGCGGCCCAACATCATTTTTT
TTACCTCGGGTGGCCTAAGGGGATTGTTTCAATCCCGATTGGCCGACCCG
ACCCAACCCGACCCAACCCAACCCGACCAATATCGCCAACGCCAACCCAG
ACCCTCTTACCCCAGCTGACCGCGTGGCCCCAATTCATGGCTGGCGCTTG
GTCAAAGCACCCTGTGGGCTGATTTTGTGTGCGGTTTTGTCGCTGGTTTG
TGTGCGTACCCAATCTAAGAAGTAAAGCAAAGATCCATGGCAGTGAACTA
GTTTTGTGTGCGTCTCTACCCAATCAGGAGTCAGGAAGTTAAGAACTGCC
CAATCGGCAGTCAGGAAATTAAGAACTAAAGATCCTTTCGCACCGTTGGT
AATCCCTATTGCTTTTTCCAAACCTTTACCTCATCTGCTGATGACATAGT
AGGCTTTCCAAATTTTCTAACATTACAACACACAATTTGGAAACGTCCAT
TTAAGGTCCAAAATGCTCCTCAAAACCCTGAAAACACTCCTCCACGAGAA
CAGCGGCTAACCATGTTCTGCAGTTTATGAGTGCCGCCGTGTACCCTTGG
TTACGCTCCAGAAAGTTGCTGTGGGTGGAGATGTCCGGTATTCTCCTGTC
AAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAAGAGGAGGAGGAAAACGACGAGGGCAAAGAAGATG
GTGTCATAAAAACAGGTAAAGGTAGAGGTAAAGGTAAAGGCCAACAACAG
CGAGAGCACGAGGGCGAGCACCATACAGCAAGGGAAAGAGAGAGGGGACG
GGGGGGTCTGGGGGCGGGCGGGCGTGATGGAGAAACTCCGCGCGATCGCG
CAGTCAGAGAATGGGAAGCCATCGATAAGGTGACGAAAGAGGGGACCTTT
CCCTTTAGTATCAGTAGTAGTATGATAGTATTGATATTGATATTGATATT
GATATTGATATTGATGTTGTGCTTCGGACGAAAGCGAACTTGGAGACTCG
CGGTGTTGCTCGTCGTAACGGAATCTCAAGGGAAACGATTAGTTGCACTT
TATCTATCTAGGCACATTTTCCATCCCCTCGACATCAAACGGCCGTCTCA
CGTTGCACAGCTGAAGAATTTCCCAGCCGCGATGAAACCGTTCTTCGCTT
TTCCGTTGATAATTGTCGGTTCGGTCAGCTGAGAACAACGGAGAATTCGA
GACCAATGGAAAAGGGTGTAGGCGGCGGATTGCGTCCCGTCAGTATAGAC
GAACACAGCCGCGTGATCAGCACGGCGGAGGTATTGAGCTGCTTCCGTTC
GCGAGTGAGAGCTGCTTCTGGCCTAGCGCTGGCCCTAGGCGATCCTTTCC
CGCAATCCTTTTAAGATTGTGTAGGGCTTTACGTCGCAAGATTCCTATGG
TACACACATCCCACGTTTGAAGAAGGTGCTCGAACAGGGCGCTTCCTAGG
AGCGGAGCAGATGTAATTGCTCGCGGTCTCTGTGGTTCATGTCGCAGTGC
TCGGTATTCGCCGCGCGTCGTGGAGGTTCGAACGCGAATCGCTTGTCGGC
ACATCGATACGCTTGCCAGGATCTTAGCATGTATAAGGCGGTCATTGTTC
CCGTTCAGCCTCAACAAGGACGTCTGAGGCTGTTCCGGCGGCGCCCCCAC
CTCAAAATTTCCGAAGGGGACAAGCTCCGCGACGAAGTCTTTCTCATTGC
ACAGGTATTGCGACTGTCCAATCCGCGCGCTGTGCGGTCATCAATCGACG
CCTTCGCGTGCTTTTTTCAACTCTCGTCCGGACCGTATGCGGGTATAATC
TTGACACTTTACACAATAATCTGCATGCAAGGTCGTTCGTTTTTTTTAAC
GCCTGAAGCTTTCTTGAAATCTTCGCGACGAGTAGGCCTTCCAAGCACGC
TCGGCTCGATCCCTTCGAAAAATAGGTATTAGCTGCAACGCGCGCACCGC
TCAATTGATGCAACGAGAGGTCGATACGCACAACAATCCCTGGGTTTGCT
CAAAGCAGACTATTAATAGCGAGAACCGCTCGAACCCTGCGCGGCTGGAA
AGGTGCACTACACCCCAGGCGACGTCATGCATCGTCGGCTCATCCAAACC
ATCTACCGGCGAATGACGCGAGATGAACGAGCTAGTCCGGACGTGGGTCC
TCACTGGGAAACTATCGGCTTCCAGGGGCACGACCCGCGAACGGATTTGA
ATCGATCTATGGGCGTCTTCTCTCTGGTTCAGGTTCGTGGTGGTAGAGCT
TTGGAACCGCGGCCGGTTCGATCGACTTCTACTGCCAGCCTTGCTGGAAC
ATGGACAAACACACACACCGTCGCGTGTTCGATCATCAAAAGTTGAACGG
GGTAATGATCAGGGCAGTCCAACACAGCAAGCGCGTAAACGTCCATGCCG
GCAATGCTGCGAGTATGACCAGGTGCTCTACCTGTTGGAGGTACAGCCCG
AGTTTGCGGCAGTTCTCCATCGAAACTCTGCGGCAGACGTCACGGGCTGG
CCTTTCTTGTGTGTCAGCATCGGCTTCACTAAGGTAGAGTGTAACGAGAG
AACCATTTGTTTTTGTTTCATGTTCTAGAGCTGCACAATAATTTGGCGAG
TCAGGGACGGAATGGCTCCAACGGCCGCAAGCTTGACGTCCTTACTTTGT
GAAAAATGAATTCCGTGAAAACGGTCGCACAGCATTCAGATCGTTGCTGC
GGTGGATCTGCACACTCCTCGCTCGAAGCATTAACCTCTCACTTGAACCC
TCAAAGGAGGCTGTCGGGGCGCTACGGCGGGGCGCCTGCAACTCCGAATG
CAACCGCCGCGGGAGCGTGATGGAAGTGGTGCACGAATTGCATCAGGCGC
AATTTCACGCGTTTCTCTTCCTTTGCCGGAAAAAGCCTGCTACCCACCAT
GCAGTTCATCTCGCAACGGTGATCATACTGTACTCAACTGAGACTTTGGA
CGCTTGCCTAAGGGCACTTGACCTGACATGAGCTGTAAGAATGCGGTGCG
ACGAGCATTGCCACAGGCACAAATTGTCCTTCGGCGACAGGAAGAGCCGC
GAGTCGCACGGAGAGAAAAAAACACTACTGTTGGCGTTGCTGAGACCGAA
GTAGCTATAGACTCTAGCGGTCACTTTCACCGTTACGGCCTCCCACGTCC
ATGGTATAATTAAAACTATATCCAGGGCGCAGCGTCGTAGCACCTACTTA
CACGCGGCGTGTACTGGTACGTCTTTCGTGAAGGGACCAGACGGCGCTAA
AGCCTACTCTTGCTTTCACAGGTGCGCACTTCGATTGGAAAAGACCCGGG
TTCGCTTCTGAAGGCCTACCGCTCATATCTGTCATCCGAGAGGGTCAGGA
AGGCGGCGAACGTTGTGCAGGCGACATGCCGTTGGCAAGGCCGGGAGCAC
CTAAACTTTGGCACAAACAGAGCTGTGGGTGACAAACAACGCGCAGTGTT
GAGCGCTCGCCAACTCCGCTACGTCACCACCGACGAGCAGGAGGGTTCTT
AAGGGAGCGAATCATGGACGGGAGTACTACATGCCAAGGGTACGCTTTTT
TCTTCTCTTCTATAATAAGAGGTTTAGCCCTATCAGTATGTTTCT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig71:743266..753410+

>mRNA_F-serratus_M_contig71.18303.1 ID=mRNA_F-serratus_M_contig71.18303.1|Name=mRNA_F-serratus_M_contig71.18303.1|organism=Fucus serratus male|type=CDS|length=3312bp|location=Sequence derived from alignment at F-serratus_M_contig71:743266..753410+ (Fucus serratus male)
ATGGACTCTTCCTTCGGGATCGCTTACGAGCCCCTTGCTACCTGTGCCAA
GTCATCGTACAATCTTCTACCTAAAACCTCTTTCGTCGATGAAGATCAAT
TCGAGAAACAGATGGACGCGGAATTTCGCGTCGAGAAATCCGTTGAAAGT
CTGCTCCAGACAACAAGCTGTGCTCATGTTCCACCTTGGAGAGGCGGTGA
ACGTGATAAGGACGATGAAATTCTACAAACCATGGAATTTGACGACTCCT
CCGGCGGCATTTCGATCCAAGTTCCAGTCAAAGATATGAGGCTGACGATG
GACTCTTCCTTCGGGATCGCTTACGAGCCCCTTGCTACCTGTGCCAAGTC
ATCGTACAATCTTCTACCTAAAACCTCTTTCGTCGATGAAGATCAATTCG
AGAAACAGATGGACGCGGAATTTCGCGTCGAGAAATCCGTTGAAAGTCTG
CTCCAGACAACAAGCTGTGCTCATGTTCCACCTTGGAGAGGCGGTGAACG
TGATAAGGACGATGAAATTCTACAAACCATGGAATTTGACGACTCCTCCG
GCGGCATTTCGATCCAAGTTCCAGTCAAAGATATGAGGCTGACGCCGGAC
ATTCAACTTGCGTGTGTGAAAGCGCTCAAGCAGCTAACGGACAATTACCA
GAAAACAGGAACAGTAACGCAGCAGGTAATAATGCATATTATCCATTTCG
AAGCAACAAGATTCGTTCCTCTCTTCATACTCGCCTCCTTTTGGGGAACC
TTGCCCGGACATTCAACTTGCGTGTGTGAAAGCGCTCAAGCAGCTAACGG
ACAATTACCAGAAAACAGGAACAGTAACGCAGCAGGTAATAATGCATATT
ATCCATTTCGAAGCAACAAGATTCGTTCCTCTCTTCATACTCGCCTCCTT
TTGGGGAACCTTGCTTGCTGTGGGTGGAGATGTCCGGTATTCTCCTGTCA
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAAGAGGAGGAGGAAAACGACGAGGGCAAAGAAGATGG
TTTGCTGTGGGTGGAGATGTCCGGTATTCTCCTGTCAAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AAGAGGAGGAGGAAAACGACGAGGGCAAAGAAGATGGTGGCGAGCACCAT
ACAGCAAGGGAAAGAGAGAGGGGACGGGGGGGTCTGGGGGCGGGCGGGCG
TGATGGAGAAACTCCGCGCGATCGCGCAGTCAGAGAATGGGAAGCCATCG
ATAAGGGCGAGCACCATACAGCAAGGGAAAGAGAGAGGGGACGGGGGGGT
CTGGGGGCGGGCGGGCGTGATGGAGAAACTCCGCGCGATCGCGCAGTCAG
AGAATGGGAAGCCATCGATAAGCTGAGAACAACGGAGAATTCGAGACCAA
TGGAAAAGGGTGTAGGCGGCGGATTGCGTCCCGTCAGTATAGACGAACAC
AGCCGCGTGATCAGCACGGCGGAGGTATTGAGCTGCTTCCGTTCGCGACT
GAGAACAACGGAGAATTCGAGACCAATGGAAAAGGGTGTAGGCGGCGGAT
TGCGTCCCGTCAGTATAGACGAACACAGCCGCGTGATCAGCACGGCGGAG
GTATTGAGCTGCTTCCGTTCGCGAGATCTTAGCATGTATAAGGCGGTCAT
TGTTCCCGTTCAGCCTCAACAAGGACGTCTGAGGCTGTTCCGGCGGCGCC
CCCACCTCAAAATTTCCGAAGGGGACAAGCTCCGCGACGAAGTCTTTCTC
ATTGCACAGGATCTTAGCATGTATAAGGCGGTCATTGTTCCCGTTCAGCC
TCAACAAGGACGTCTGAGGCTGTTCCGGCGGCGCCCCCACCTCAAAATTT
CCGAAGGGGACAAGCTCCGCGACGAAGTCTTTCTCATTGCACAGGTGCAC
TACACCCCAGGCGACGTCATGCATCGTCGGCTCATCCAAACCATCTACCG
GCGAATGACGCGAGATGAACGAGCTAGTCCGGACGTGGGTCCTCACTGGG
AAACTATCGGCTTCCAGGGGCACGACCCGCGAACGGATTTGAATCGATCT
ATGGGCGTCTTCTCTCTGGTTCAGGTGCACTACACCCCAGGCGACGTCAT
GCATCGTCGGCTCATCCAAACCATCTACCGGCGAATGACGCGAGATGAAC
GAGCTAGTCCGGACGTGGGTCCTCACTGGGAAACTATCGGCTTCCAGGGG
CACGACCCGCGAACGGATTTGAATCGATCTATGGGCGTCTTCTCTCTGGT
TCAGGTGCTCTACCTGTTGGAGGTACAGCCCGAGTTTGCGGCAGTTCTCC
ATCGAAACTCTGCGGCAGACGTCACGGGCTGGCCTTTCTTGTGTGTCAGC
ATCGGCTTCACTAAGGTGCTCTACCTGTTGGAGGTACAGCCCGAGTTTGC
GGCAGTTCTCCATCGAAACTCTGCGGCAGACGTCACGGGCTGGCCTTTCT
TGTGTGTCAGCATCGGCTTCACTAAGGAGGCTGTCGGGGCGCTACGGCGG
GGCGCCTGCAACTCCGAATGCAACCGCCGCGGGAGCGTGATGGAAGTGGT
GCACGAATTGCATCAGGCGCAATTTCACGCGTTTCTCTTCCTTTGCCGGA
AAAAGCCTGCTACCCACCATGCAGTTCATCTCGCAACGGAGGCTGTCGGG
GCGCTACGGCGGGGCGCCTGCAACTCCGAATGCAACCGCCGCGGGAGCGT
GATGGAAGTGGTGCACGAATTGCATCAGGCGCAATTTCACGCGTTTCTCT
TCCTTTGCCGGAAAAAGCCTGCTACCCACCATGCAGTTCATCTCGCAACG
GTGCGCACTTCGATTGGAAAAGACCCGGGTTCGCTTCTGAAGGCCTACCG
CTCATATCTGTCATCCGAGAGGGTCAGGAAGGCGGCGAACGTTGTGCAGG
CGACATGCCGTTGGCAAGGCCGGGAGCACCTAAACTTTGGCACAAACAGA
GCTGTGGGTGACAAACAACGCGCAGTGTTGAGCGCTCGCCAACTCCGCTA
CGTCACCACCGACGAGCAGGAGGGTTCTTAAGTGCGCACTTCGATTGGAA
AAGACCCGGGTTCGCTTCTGAAGGCCTACCGCTCATATCTGTCATCCGAG
AGGGTCAGGAAGGCGGCGAACGTTGTGCAGGCGACATGCCGTTGGCAAGG
CCGGGAGCACCTAAACTTTGGCACAAACAGAGCTGTGGGTGACAAACAAC
GCGCAGTGTTGAGCGCTCGCCAACTCCGCTACGTCACCACCGACGAGCAG
GAGGGTTCTTAA
back to top