mRNA_F-serratus_M_contig71.18302.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig71.18302.1 vs. uniprot
Match: D7FYS6_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS6_ECTSI) HSP 1 Score: 382 bits (982), Expect = 5.980e-128 Identity = 179/210 (85.24%), Postives = 199/210 (94.76%), Query Frame = 3
Query: 240 MVALGPAIMSKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYVSKILDFMDTLFIVLKKSWRQLSFLHIYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKNIWWKKYLTLMQMIQFVCMTSQAVYLLATGCPNYPPRIVMVYAGYILSLLLLFAKFYVDSYTKKP 866
MV +GP +M+ + PIDSYPVRFVYN+VQ++LCSYM +EAFMIAYRN YP+L CAPFDA+NPPA NLLWLFYVSK+LDFMDT+FIVLKKSWRQLSFLH+YHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTK+IWWKKYLTLMQMIQFVCMT+QA+YLL TGC +YPPRIV+VYAGYILSLL LFA+FYV+SYTKKP
Sbjct: 1 MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKP 210
BLAST of mRNA_F-serratus_M_contig71.18302.1 vs. uniprot
Match: A0A835Z8H5_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H5_9STRA) HSP 1 Score: 345 bits (884), Expect = 2.650e-112 Identity = 158/256 (61.72%), Postives = 197/256 (76.95%), Query Frame = 3
Query: 105 LRGSIDGVGDIVLDWARNGGEQGPTKEWMLTDFSTAMAIVVGYLAMVALGPAIMSKLQPIDS--YPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYVSKILDFMDTLFIVLKKSWRQLSFLHIYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKNIWWKKYLTLMQMIQFVCMTSQAVYLLATGCPNYPPRIVMVYAGYILSLLLLFAKFYVDSYTKK 863
L SI+ VG +++WA N + GPT +W + DF +A+ +V YL + +G +M +QP+D+ YP RF+YN+VQ+MLCSYM +EA +IA+RN Y +L C PF+ +NPP GN+LWLFY+SKILDF DT+FIVL+K W+QLSFLH+YHH TIFLFYWLN+N GYDGD+YLTIVLNGFIHTVMYTYYFVSMHT IWWK LT MQM+QFV M SQA+YLL TGC YPPR+ Y YI SLL+LF F++ SY K
Sbjct: 6 LESSINSVGTRIIEWATNDRKAGPTADWPMADFYSAVMVVAAYLGFIFVGSFVMKFVQPLDAPTYPFRFIYNIVQIMLCSYMCLEAGIIAHRNNYGILPCVPFNVQNPPVGNVLWLFYISKILDFADTVFIVLRKKWKQLSFLHVYHHTTIFLFYWLNINVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTDKIWWKSSLTAMQMVQFVTMISQALYLLTTGCTTYPPRVTQAYCLYIFSLLILFGNFFIKSYMPK 261
BLAST of mRNA_F-serratus_M_contig71.18302.1 vs. uniprot
Match: A0A7S4JGP6_9STRA (Elongation of fatty acids protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JGP6_9STRA) HSP 1 Score: 320 bits (821), Expect = 8.060e-103 Identity = 158/264 (59.85%), Postives = 195/264 (73.86%), Query Frame = 3
Query: 114 SIDGVGDIVLDWARNGGE-QGPTKEWMLTDFSTAMAIVVGYLAMVALGPAIM-SKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYVSKILDFMDTLFIVLKKSWRQLSFLHIYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKN--------IWWKKYLTLMQMIQFVCMTSQAVYLLATGCPNYPPRIVMVYAGYILSLLLLFAKFYVDSYTKKPQK 872
++D +G+ +L+WA + +G T+ W LTDF TA +I + Y+A V +G A+M S + +D YP++F YN+ Q+MLC+YM+IE F++AYRN Y L C D KNPP NLLWLFYVSK+ DF DT+FIVL K WRQLSFLH+YHH TIFLFYWLN + +DGD+YLTIVLNGFIHTVMYTYYF+ MHTK+ IWWK LTLMQ+IQF+ M SQA YLL TGC R+V VY YILSL LFA+FYV SYTKKP+K
Sbjct: 7 TMDSIGESILNWADPDNQFRGYTEGWFLTDFRTAGSIALAYVAFVVIGSAVMKSGVAAMDPYPIKFFYNVSQIMLCAYMTIEGFLLAYRNGYTCLPCIDIDTKNPPLANLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNAHVNFDGDIYLTIVLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSSLTLMQLIQFITMMSQATYLLVTGCQKTGLRVVSVYFVYILSLFFLFAQFYVASYTKKPKK 270
BLAST of mRNA_F-serratus_M_contig71.18302.1 vs. uniprot
Match: A0A7R9WGN6_9STRA (Elongation of fatty acids protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGN6_9STRA) HSP 1 Score: 318 bits (816), Expect = 4.380e-102 Identity = 156/264 (59.09%), Postives = 195/264 (73.86%), Query Frame = 3
Query: 114 SIDGVGDIVLDWARNGGE-QGPTKEWMLTDFSTAMAIVVGYLAMVALGPAIM-SKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYVSKILDFMDTLFIVLKKSWRQLSFLHIYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKN--------IWWKKYLTLMQMIQFVCMTSQAVYLLATGCPNYPPRIVMVYAGYILSLLLLFAKFYVDSYTKKPQK 872
++D +G+ +L WA G+ +G T+ W LTDFS+A + + Y+A V +G A+M S + +D YP++F+YN+ Q+MLC+YM+IEAF++AYRN Y L C D +NPP NLLWLFY+SK+ DF DT+FIV+ K WRQLSFLH+YHH TIFLFYWLN + YDGD+YLTI+LNGFIHTVMYTYYF+ MHTK+ IWWK YLTLMQMIQFV M SQA YLL T C R+V VY YILSL LFA+FYV SYTK +K
Sbjct: 7 TMDSIGESILSWADPEGKFRGHTEGWFLTDFSSAGTVALAYVAFVVIGSAVMKSGVAAMDPYPIKFIYNVSQIMLCAYMTIEAFLLAYRNGYTCLPCNNVDTENPPLANLLWLFYISKVWDFWDTVFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSYLTLMQMIQFVTMMSQATYLLGTQCEKTSLRVVFVYLVYILSLFFLFAQFYVQSYTKPKKK 270
BLAST of mRNA_F-serratus_M_contig71.18302.1 vs. uniprot
Match: A0A6U1Q8V8_9STRA (Elongation of fatty acids protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q8V8_9STRA) HSP 1 Score: 316 bits (809), Expect = 7.150e-101 Identity = 155/248 (62.50%), Postives = 187/248 (75.40%), Query Frame = 3
Query: 138 VLDWARNGGEQGPTKEWMLTDFSTAMAIVVGYLAMVALGPAI--MSKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYVSKILDFMDTLFIVLKKSWRQLSFLHIYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKNIWWKKYLTLMQMIQFVCMTSQAVYLLATGCPNYPPRIVMVYAGYILSLLLLFAKFYVDSYTKKPQK 872
+L W G TK W LTD +A+ I YL V +G + + + I YPV+F+YN+VQVMLCSYM+IEA M+A+R Y L C PF+AKNPP +L++FY+SKILDFMDT FI++ K W+QLSFLH+YHH +IFLFYWLN+N GYDGDVYLTIVLNGFIHTVMYTYYFVS+HTK+IWWK LT+ QMIQFV M +QA YLL TGC +YPPRIV+ Y YILSLL+LFA F+V SY KK K
Sbjct: 26 ILAWVSEGRVHEYTKGWPLTDLESALTIAGAYLLFVLVGSMLFKVEAVPAIKLYPVQFLYNIVQVMLCSYMAIEAGMVAFRQGYTCLPCEPFNAKNPPVAEVLYIFYLSKILDFMDTFFIIIGKKWKQLSFLHVYHHTSIFLFYWLNINVGYDGDVYLTIVLNGFIHTVMYTYYFVSLHTKDIWWKSSLTMCQMIQFVTMNAQAGYLLLTGCKSYPPRIVLSYLVYILSLLVLFANFFVQSYLKKGGK 273
BLAST of mRNA_F-serratus_M_contig71.18302.1 vs. uniprot
Match: A0A7S3ZXB8_9STRA (Elongation of fatty acids protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZXB8_9STRA) HSP 1 Score: 309 bits (792), Expect = 1.380e-98 Identity = 148/263 (56.27%), Postives = 193/263 (73.38%), Query Frame = 3
Query: 90 SALGELRGSIDGVGDIVLDWARNGGE--QGPTKEWMLTDFSTAMAIVVGYLAMVALGPAIMSKLQP---IDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLLCAPFDAKNPPAGNLLWLFYVSKILDFMDTLFIVLKKSWRQLSFLHIYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKNIWWKKYLTLMQMIQFVCMTSQAVYLLATGCPNYPPRIVMVYAGYILSLLLLFAKFYVDSYTKK 863
+++ L S+D VG+ ++DWA G P + W L FSTA+AI V YLA V LG ++ ++ P + Y V F+YN+ QVMLCSYM +EA ++A R++Y L+C F ++NPP N+LWLFYVSKILDF+DT FIV+ K W+QLSFLH+YHH TIFLFYWLN++ YDGD+YLT+VLNG IH +MYTYYFVSMHT++IWWKKYLTL Q+ QF CM QA+ L ATGC + PPR+ +Y YI+SL +LF +F+V SY K
Sbjct: 4 ASMTSLAESLDSVGERIVDWALVGSPVTDAPVRGWPLARFSTALAIAVAYLAFVVLG-SLFARATPGEGVKLYGVAFLYNICQVMLCSYMCLEAAIVARRHDYNLVCNSFKSENPPVANVLWLFYVSKILDFVDTFFIVIGKKWKQLSFLHVYHHTTIFLFYWLNLHVNYDGDIYLTVVLNGLIHAIMYTYYFVSMHTRDIWWKKYLTLAQLFQFTCMNGQALVLYATGCSDAPPRVTGLYFVYIVSLFVLFLQFFVASYVPK 265
BLAST of mRNA_F-serratus_M_contig71.18302.1 vs. uniprot
Match: W7TSM8_9STRA (Elongation of fatty acids protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSM8_9STRA) HSP 1 Score: 311 bits (796), Expect = 1.850e-98 Identity = 151/281 (53.74%), Postives = 191/281 (67.97%), Query Frame = 3
Query: 84 MGSALGELRGSIDGVGDIVLDWARNGGE--QGPTKEWMLTDFSTAMAIVVGYLAMVALGPAIMSKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYVSKILDFMDTLFIVLKKSWRQLSFLHIYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKNIWWKKYLTLMQMIQFVCMTSQAVYLLATGCPNYPPRIVMVYAGYILSLLLLFAKFYVDSYTKKPQKVGNNSTPNGVKPYKA 917
M L + + + + D + WA G + PT+ W L A+AI YL V +G +M QP+ Y ++F YN+ QV LCSYM IEA + AYRN Y LL C PF+ NPP G LLWLFY+SKI DF DT+FI+L K W QLSFLH+YHH TIFL YWLN+NAGYDGD++LT++LNG IHTVMY YYF+SMHTK+IWWKKYLTL Q+IQF+ M +QA+Y+L GC ++P +I +Y GYILSLL+LF FY +Y+ + PNG KP KA
Sbjct: 14 MAGYLADYQKTCAELTDAIFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQPVKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYS--------SPKPNGKKPKKA 286
BLAST of mRNA_F-serratus_M_contig71.18302.1 vs. uniprot
Match: A0A6T8G4U0_HEMAN (Elongation of fatty acids protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8G4U0_HEMAN) HSP 1 Score: 309 bits (791), Expect = 2.300e-98 Identity = 148/257 (57.59%), Postives = 182/257 (70.82%), Query Frame = 3
Query: 117 IDGVGDIVLDWARNGGEQG-------PTKEWMLTDFSTAMAIVVGYLAMVALGPAIMSKLQPID--SYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYVSKILDFMDTLFIVLKKSWRQLSFLHIYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKNIWWKKYLTLMQMIQFVCMTSQAVYLLATGCPNYPPRIVMVYAGYILSLLLLFAKFYVDSYT 857
+D GD +L W N PTK W FS+A I GYL V G +M+ P+D +YP+RF YN+VQ+MLCSYM+IEA +AYRN Y + C PFD K+PP G LLWLFYVSKILDF+DT I+L K W QLSFLH+YHH TIF+ YW+NVN GYDGD+YLTIVLNG IHT+MYTYYFVSMH+++IWWKKYLT+ QMIQF+CM SQA+ L+ C +P R+ M Y YI++L LF KF++ SYT
Sbjct: 4 LDSYGDSLLAWFVNVDVDTFTRSFPRPTKSWPFASFSSAFLITAGYLLFVLAGRIVMTVFHPMDRLTYPIRFCYNIVQMMLCSYMTIEAAALAYRNGYNMYPCNPFDTKSPPLGPLLWLFYVSKILDFVDTAVIILGKKWGQLSFLHVYHHATIFIMYWVNVNVGYDGDIYLTIVLNGVIHTIMYTYYFVSMHSRDIWWKKYLTMCQMIQFICMNSQAILLIKDHCKTFPARVTMTYLFYIITLFFLFLKFFITSYT 260
BLAST of mRNA_F-serratus_M_contig71.18302.1 vs. uniprot
Match: L1IAX0_GUITC (Elongation of fatty acids protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IAX0_GUITC) HSP 1 Score: 308 bits (788), Expect = 7.940e-98 Identity = 149/263 (56.65%), Postives = 192/263 (73.00%), Query Frame = 3
Query: 120 DGVGDIVLDWARNG---GEQG------PTKEWMLTDFSTAMAIVVGYLAMVALGPAIMSKLQPID--SYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYVSKILDFMDTLFIVLKKSWRQLSFLHIYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKNIWWKKYLTLMQMIQFVCMTSQAVYLLATGCPNYPPRIVMVYAGYILSLLLLFAKFYVDSYTKKPQK 872
D VG +L++A N + G PT+ W LTDF++A AI Y A+V +G +M + +D +YP+RFVYN++QVMLCSYM++EA ++AYR+ Y L+ C PF +NPP +LWLFY+SK+LDFMDT FIVL K W QLSFLH+YHH TIF+ YW+NVN GYDGD+YLTIVLNGFIHTVMYTYYFVSMHTK+IWWKKYLT+MQMIQF+ M QA++LL + C +P ++ +Y YI+SL LF F++ SY K
Sbjct: 9 DAVGRQLLNFAANTELFDDSGKAIKPLPTQGWFLTDFASAFAISAIYFALVIVGRIVMIPFRSLDKLTYPIRFVYNILQVMLCSYMTLEAGILAYRHNYNLVPCNPFKTENPPIAPVLWLFYISKVLDFMDTFFIVLGKKWEQLSFLHVYHHLTIFMIYWMNVNVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTMMQMIQFITMNGQAIWLLQSNCQTFPRKVTQLYLVYIMSLFALFLNFFIRSYVSPKSK 271
BLAST of mRNA_F-serratus_M_contig71.18302.1 vs. uniprot
Match: F0Y9P2_AURAN (Elongation of fatty acids protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9P2_AURAN) HSP 1 Score: 306 bits (784), Expect = 1.840e-97 Identity = 144/256 (56.25%), Postives = 188/256 (73.44%), Query Frame = 3
Query: 120 DGVGDIVLDWARNGGE--QGPTKEWMLTDFSTAMAIVVGYLAMVALGPAIMSKLQPIDS---YPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLLCAPFDAKNPPAGNLLWLFYVSKILDFMDTLFIVLKKSWRQLSFLHIYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKNIWWKKYLTLMQMIQFVCMTSQAVYLLATGCPNYPPRIVMVYAGYILSLLLLFAKFYVDSYTKKPQK 872
+ +GD ++ WA G + P K W L F+TA++I YLA V +G IM + P D Y V F+YN+ QVMLCSYM IEA ++A R+ + L+C +DAK+PP N+LWLFY SK+LDF+DT FIV+ K W+QLSFLH+YHH TIFLFYWLN++ YDGD+YLTIVLNG IHT+MYTYYFVSMHT++IWWKKYLTL Q++QF CM +QA+Y+ TGC PPR+ +Y YI+SL +LF +F++ SY K +K
Sbjct: 5 EAIGDQIIAWALVGSDVTDEPVKGWALGSFTTAISIAGAYLAFVLVGSLIM-RAYPGDGIKLYGVAFLYNIAQVMLCSYMCIEAVIVAKRSNFNLVCNSYDAKHPPMANVLWLFYASKVLDFVDTFFIVIGKKWKQLSFLHVYHHTTIFLFYWLNLHVNYDGDIYLTIVLNGAIHTIMYTYYFVSMHTRDIWWKKYLTLAQLVQFTCMNAQAIYMFVTGCSATPPRVTAIYFVYIISLFILFLQFFMSSYVPKKKK 259 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig71.18302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig71.18302.1 >prot_F-serratus_M_contig71.18302.1 ID=prot_F-serratus_M_contig71.18302.1|Name=mRNA_F-serratus_M_contig71.18302.1|organism=Fucus serratus male|type=polypeptide|length=280bp MGSALGELRGSIDGVGDIVLDWARNGGEQGPTKEWMLTDFSTAMAIVVGYback to top mRNA from alignment at F-serratus_M_contig71:714388..726806- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig71.18302.1 ID=mRNA_F-serratus_M_contig71.18302.1|Name=mRNA_F-serratus_M_contig71.18302.1|organism=Fucus serratus male|type=mRNA|length=12419bp|location=Sequence derived from alignment at F-serratus_M_contig71:714388..726806- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig71:714388..726806- >mRNA_F-serratus_M_contig71.18302.1 ID=mRNA_F-serratus_M_contig71.18302.1|Name=mRNA_F-serratus_M_contig71.18302.1|organism=Fucus serratus male|type=CDS|length=1680bp|location=Sequence derived from alignment at F-serratus_M_contig71:714388..726806- (Fucus serratus male)back to top |