mRNA_F-serratus_M_contig71.18300.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig71.18300.1
Unique NamemRNA_F-serratus_M_contig71.18300.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig71.18300.1 vs. uniprot
Match: D7FYS4_ECTSI (40S ribosomal protein S14 n=3 Tax=Sar TaxID=2698737 RepID=D7FYS4_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 1.210e-90
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 2 
Query:    5 KKNTEAKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 448
            KK  E KVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL
Sbjct:    4 KKTKEDKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_F-serratus_M_contig71.18300.1 vs. uniprot
Match: M1XK24_9METZ (40S ribosomal protein S14 n=1 Tax=Sycon ciliatum TaxID=27933 RepID=M1XK24_9METZ)

HSP 1 Score: 258 bits (660), Expect = 1.420e-81
Identity = 130/148 (87.84%), Postives = 139/148 (93.92%), Query Frame = 2 
Query:    5 KKNTEAKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 448
            +K  EAK EE + LGP+V EGENVFGVAHIFASFNDTFVHITDLSG+ET+ RVTGGMKVKADRDEASPYAAMLAAQDVA RCKE+GITALHIK+RATGGN+TKTPGPGAQSALRALARAGMKIGRIEDVTPIP+D TRRKGGRRGRRL
Sbjct:    7 RKGKEAKKEENIVLGPQVGEGENVFGVAHIFASFNDTFVHITDLSGKETITRVTGGMKVKADRDEASPYAAMLAAQDVAVRCKEVGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 154
[Close]
BLAST of mRNA_F-serratus_M_contig71.18300.1 vs. uniprot
Match: A0A7S2HU48_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HU48_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.670e-81
Identity = 129/147 (87.76%), Postives = 140/147 (95.24%), Query Frame = 2 
Query:    8 KNTEAKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 448
            K+ E  VEE  T+G KVA+GEN+FGVAHIFASFNDTFVH+TDLSGRET+VRVTGGMKVKADRDEASPYAAMLAAQDVAA+CK++GITALHIKMRATGGNKTKTPGPGAQSALRALARAG+KIGRIEDVTPIP+DCTRRK GRRGRRL
Sbjct:   23 KDAEQPVEEMTTIGAKVADGENLFGVAHIFASFNDTFVHVTDLSGRETIVRVTGGMKVKADRDEASPYAAMLAAQDVAAKCKDIGITALHIKMRATGGNKTKTPGPGAQSALRALARAGLKIGRIEDVTPIPSDCTRRKSGRRGRRL 169
[Close]
BLAST of mRNA_F-serratus_M_contig71.18300.1 vs. uniprot
Match: A0A1D1Z556_9ARAE (40S ribosomal protein S14-3 n=2 Tax=Viridiplantae TaxID=33090 RepID=A0A1D1Z556_9ARAE)

HSP 1 Score: 258 bits (659), Expect = 1.750e-81
Identity = 130/149 (87.25%), Postives = 141/149 (94.63%), Query Frame = 2 
Query:    2 SKKNTEAKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 448
            S+   +AKVEE ++LGP+V +GE VFGVAHIFASFNDTFVH+TDLSGRET+VRVTGGMKVKADRDE+SPYAAMLAAQDVAA+CKELGITALHIK+RATGGN TKTPGPGAQSALRALARAGMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    2 SRSKKKAKVEENISLGPQVRDGEEVFGVAHIFASFNDTFVHVTDLSGRETIVRVTGGMKVKADRDESSPYAAMLAAQDVAAKCKELGITALHIKLRATGGNGTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 150
[Close]
BLAST of mRNA_F-serratus_M_contig71.18300.1 vs. uniprot
Match: A9P8E9_POPTR (Uncharacterized protein n=8 Tax=fabids TaxID=91835 RepID=A9P8E9_POPTR)

HSP 1 Score: 257 bits (657), Expect = 3.500e-81
Identity = 129/149 (86.58%), Postives = 139/149 (93.29%), Query Frame = 2 
Query:    2 SKKNTEAKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 448
            SK+ T    EE VTLGP V EGE+VFGVAHIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDV+ RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    2 SKRRTREPKEENVTLGPTVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 150
[Close]
BLAST of mRNA_F-serratus_M_contig71.18300.1 vs. uniprot
Match: M7Z6I6_TRIUA (40S ribosomal protein S14 n=4 Tax=Triticum TaxID=4564 RepID=M7Z6I6_TRIUA)

HSP 1 Score: 257 bits (657), Expect = 3.620e-81
Identity = 128/149 (85.91%), Postives = 139/149 (93.29%), Query Frame = 2 
Query:    2 SKKNTEAKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 448
            SK+ T    EE VTLGP V EGE+VFGVAHIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLA+QDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:    3 SKRKTREPKEENVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVATRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_F-serratus_M_contig71.18300.1 vs. uniprot
Match: K3YAJ9_SETIT (Uncharacterized protein n=7 Tax=Magnoliopsida TaxID=3398 RepID=K3YAJ9_SETIT)

HSP 1 Score: 257 bits (656), Expect = 5.120e-81
Identity = 130/148 (87.84%), Postives = 137/148 (92.57%), Query Frame = 2 
Query:    5 KKNTEAKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 448
            +K T    EE VTLGP V EGE VFGVAHIFASFNDTF+HITDLSGRETMVR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:    4 RKKTREPKEENVTLGPAVREGEYVFGVAHIFASFNDTFIHITDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_F-serratus_M_contig71.18300.1 vs. uniprot
Match: K3XZS1_SETIT (Uncharacterized protein n=20 Tax=Poaceae TaxID=4479 RepID=K3XZS1_SETIT)

HSP 1 Score: 256 bits (655), Expect = 6.990e-81
Identity = 129/149 (86.58%), Postives = 138/149 (92.62%), Query Frame = 2 
Query:    2 SKKNTEAKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 448
            SK+ T    EE VTLGP V EGE VFGVAHIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:    2 SKRKTREPKEENVTLGPTVREGEFVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 150
[Close]
BLAST of mRNA_F-serratus_M_contig71.18300.1 vs. uniprot
Match: A0A1U8B504_NELNU (40S ribosomal protein S14-like n=10 Tax=Mesangiospermae TaxID=1437183 RepID=A0A1U8B504_NELNU)

HSP 1 Score: 256 bits (655), Expect = 6.990e-81
Identity = 127/140 (90.71%), Postives = 135/140 (96.43%), Query Frame = 2 
Query:   29 EERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 448
            EE VTLGP V EGENVFGVAHIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMK+GRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:   11 EENVTLGPTVREGENVFGVAHIFASFNDTFIHVTDLSGRETIVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKVGRIEDVTPIPTDSTRRKGGRRGRRL 150
[Close]
BLAST of mRNA_F-serratus_M_contig71.18300.1 vs. uniprot
Match: M7YD74_TRIUA (40S ribosomal protein S14 n=1 Tax=Triticum urartu TaxID=4572 RepID=M7YD74_TRIUA)

HSP 1 Score: 257 bits (656), Expect = 8.500e-81
Identity = 127/149 (85.23%), Postives = 139/149 (93.29%), Query Frame = 2 
Query:    2 SKKNTEAKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 448
            SK+ T    EE VTLGP V EGE+VFGVAH+FASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLA+QDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:   18 SKRKTREPKEENVTLGPAVREGEHVFGVAHVFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVATRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 166
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig71.18300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS4_ECTSI1.210e-9097.9740S ribosomal protein S14 n=3 Tax=Sar TaxID=269873... [more]
M1XK24_9METZ1.420e-8187.8440S ribosomal protein S14 n=1 Tax=Sycon ciliatum T... [more]
A0A7S2HU48_9STRA1.670e-8187.76Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1D1Z556_9ARAE1.750e-8187.2540S ribosomal protein S14-3 n=2 Tax=Viridiplantae ... [more]
A9P8E9_POPTR3.500e-8186.58Uncharacterized protein n=8 Tax=fabids TaxID=91835... [more]
M7Z6I6_TRIUA3.620e-8185.9140S ribosomal protein S14 n=4 Tax=Triticum TaxID=4... [more]
K3YAJ9_SETIT5.120e-8187.84Uncharacterized protein n=7 Tax=Magnoliopsida TaxI... [more]
K3XZS1_SETIT6.990e-8186.58Uncharacterized protein n=20 Tax=Poaceae TaxID=447... [more]
A0A1U8B504_NELNU6.990e-8190.7140S ribosomal protein S14-like n=10 Tax=Mesangiosp... [more]
M7YD74_TRIUA8.500e-8185.2340S ribosomal protein S14 n=1 Tax=Triticum urartu ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig71contigF-serratus_M_contig71:701578..705618 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score194.5
Seed ortholog evalue2.4e-47
Seed eggNOG ortholog2880.D7FYS4
Preferred nameRPS14
KEGG rclassRC00002,RC02753
KEGG koko:K01000,ko:K02955
KEGG TC9.B.146
KEGG ReactionR05629,R05630
KEGG Pathwayko00550,ko01100,ko01502,ko03010,map00550,map01100,map01502,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000028,GO:0000122,GO:0000184,GO:0000462,GO:0000956,GO:0002181,GO:0002262,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030490,GO:0030684,GO:0030686,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032040,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034101,GO:0034248,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0042592,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045182,GO:0045184,GO:0045892,GO:0045934,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051252,GO:0051253,GO:0051641,GO:0051649,GO:0055044,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070181,GO:0070727,GO:0070925,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098588,GO:0098805,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.mRNA 5'-UTR binding
EggNOG OGsCOG0100@1,KOG0407@2759
Ec32 ortholog descriptionRibosomal protein S11
Ec32 orthologEc-19_002330.1
EC2.7.8.13
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01011,ko03011
Exons4
Model size1451
Cds size300
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig71.18300.1prot_F-serratus_M_contig71.18300.1Fucus serratus malepolypeptideF-serratus_M_contig71 702578..703709 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932182.2147422-UTR-F-serratus_M_contig71:701577..7025771622932182.2147422-UTR-F-serratus_M_contig71:701577..702577Fucus serratus maleUTRF-serratus_M_contig71 701578..702577 -
1690964187.49849-UTR-F-serratus_M_contig71:701577..7025771690964187.49849-UTR-F-serratus_M_contig71:701577..702577Fucus serratus maleUTRF-serratus_M_contig71 701578..702577 -
1622932182.2954044-UTR-F-serratus_M_contig71:703709..7037391622932182.2954044-UTR-F-serratus_M_contig71:703709..703739Fucus serratus maleUTRF-serratus_M_contig71 703710..703739 -
1690964187.5520635-UTR-F-serratus_M_contig71:703709..7037391690964187.5520635-UTR-F-serratus_M_contig71:703709..703739Fucus serratus maleUTRF-serratus_M_contig71 703710..703739 -
1622932182.3149493-UTR-F-serratus_M_contig71:705497..7056181622932182.3149493-UTR-F-serratus_M_contig71:705497..705618Fucus serratus maleUTRF-serratus_M_contig71 705498..705618 -
1690964187.5623605-UTR-F-serratus_M_contig71:705497..7056181690964187.5623605-UTR-F-serratus_M_contig71:705497..705618Fucus serratus maleUTRF-serratus_M_contig71 705498..705618 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932182.2358363-CDS-F-serratus_M_contig71:702577..7026581622932182.2358363-CDS-F-serratus_M_contig71:702577..702658Fucus serratus maleCDSF-serratus_M_contig71 702578..702658 -
1690964187.5120533-CDS-F-serratus_M_contig71:702577..7026581690964187.5120533-CDS-F-serratus_M_contig71:702577..702658Fucus serratus maleCDSF-serratus_M_contig71 702578..702658 -
1622932182.259656-CDS-F-serratus_M_contig71:703053..7031701622932182.259656-CDS-F-serratus_M_contig71:703053..703170Fucus serratus maleCDSF-serratus_M_contig71 703054..703170 -
1690964187.5263383-CDS-F-serratus_M_contig71:703053..7031701690964187.5263383-CDS-F-serratus_M_contig71:703053..703170Fucus serratus maleCDSF-serratus_M_contig71 703054..703170 -
1622932182.2761545-CDS-F-serratus_M_contig71:703607..7037091622932182.2761545-CDS-F-serratus_M_contig71:703607..703709Fucus serratus maleCDSF-serratus_M_contig71 703608..703709 -
1690964187.539758-CDS-F-serratus_M_contig71:703607..7037091690964187.539758-CDS-F-serratus_M_contig71:703607..703709Fucus serratus maleCDSF-serratus_M_contig71 703608..703709 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig71.18300.1

>prot_F-serratus_M_contig71.18300.1 ID=prot_F-serratus_M_contig71.18300.1|Name=mRNA_F-serratus_M_contig71.18300.1|organism=Fucus serratus male|type=polypeptide|length=100bp
MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGG
NKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL*
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mRNA from alignment at F-serratus_M_contig71:701578..705618-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig71.18300.1 ID=mRNA_F-serratus_M_contig71.18300.1|Name=mRNA_F-serratus_M_contig71.18300.1|organism=Fucus serratus male|type=mRNA|length=4041bp|location=Sequence derived from alignment at F-serratus_M_contig71:701578..705618- (Fucus serratus male)
GTCGAAAAAGAATACCGAGGCGAAGGTGGAAGAGAGGGTTACCCTCGGTC
CCAAGGTAGCGGAAGGGGAGAACGTGTTCGGCGTCGCGCACATCTTCGCG
TCGTTCAACGACACCTTCGTGGTGAGACCCTTATTATTATTAGCAATACA
GTAATTATAGTACAACCACTATTTGGACTACTGTAATATTACTATGAAGA
GAAAGACTTGTACCACGAAACCATCGTACCACGTGAGAGCGTGGCCGGCG
TCGCGTATTTCGCCTCGGAGTCTGTTTGACAGGGCCCCTTTTTTCTTACA
GGAATATAAAACCTCATATCATATATATGCGTATTTTTTTGTTACGGTTC
GTCAAATGGGTATTAAGAGCATACAAATATCGGCAGCTCCGCCCCTGATT
GGCCAGGGACGGTCCAGAAACATGCCAAAACCTCTACAACACTAAAACAG
GTAAATCGGGTACAGTAGTAAAAAGGCGTGCATACCGGCGTCATTGCCTC
AAAATACAATTTTGATATCAACAATTCCACATGAAAGACCGCTGCTGTAC
ACATGGCCACAGTCATGTATATTTCTTCCGAAGGAAGTTTTGGGCGTCGA
AAGTCATGTACCGAGGTTCGGCGGCAGACTTTTTGGTGGTTTTGTGTAAA
TCCGGGAATAACTGCAAATGCCACAGAAAGGTGACTCCACACATTTAGTC
AACTTTCTTGGGGTTATTATCAATAGCATGTAGACTACTGTATTAATAGA
ACCGTAGCGGAAAGTGTGAGAACGTGCGTATGTAAAATTCAACCATTGAT
TGACGAGTTGTAAGAGTGCTGAACTTGCATCGCGATAAAAATGATTAAGG
CGTGAACCGGGGAGAGATGGGAAGATCTTTAGTAACCACAGGCAGGATGG
AATGAGGCCCATCGGCTATAAGTGAGATGAAAAGAACAACAAAAAAAGTT
GTCCTTCAGAGGGTGCTCCAGCAGGGTTTTGGAAGGTTTTCTGCGCAAAA
CCGGCGGTGTCGGGGGCGATGTCAGGCTCAAGAGCGGAAAACACCTGCTG
CTGTTCCTACTGCTAAACGGGAACCTGGCTTGGACCGCCAAAGCATAACT
ATAGAAATTATATTGCCACAAGGTAGATACCAACTTGTCGTGGAGCTGGA
CCTGCGTTGTTCACCATGTGCTACGTAGATGCACACGCGGCGATTATGGA
GTCTACCTGCACCGAGCTGGCCCGCAGGGTATGGATCACAGGAGATTTTT
TAAGGGATATGACCGTGCGTCCAAATGGTGTCGTGAGAAACAACGAGGAA
CGGTCCTGGGCTCCGATACCATTTCCTTGGTATCGTGCCACATGACCTAC
AAGCCCCCCCAGTCCAATAGCCCTGAGTCATAAGATAACGTACAGTATGT
ACCTTGTAGAGCTGTCATGGCTCCGTGGTTGCTCCGTTACGAGGTGCCCT
TTGAGAACTCTTCAGTTTTCTCTCTGTTTTCTCTATTAAAGCTCTATTTG
GCCTCCCACCCATTGGCTAGTAGCTACAGTCGTGTGATGGTTTCATCTGC
ATTTTGTGCCCAAAATATTTTTTTGTGGGGCCCCGTTAAATCATGTGGTC
AGCTCTCGTAGTTTGCAGTCAGCTAATGTTGAGCGCCTTCATCCCGAGAT
CGCTAGATTTCATTTGATCTGTTTGAGGGAGTTGATATATTGGTGGATGC
TGAATGGTGCTCGCAGGTGGTCGCATAGATACCCACCGTTACTCCAAACG
TACCGTGAGAGGATTGTGCCTTGGTCGAAGCTGGAGAAAACGGCTTAAAA
CACGCGTTGCCCCAATTTAAATCGTATCGACGTTTTGCTTTCGCGAATTT
TCTGTCTTTAATTTCTATTGATGTTGCAGCACATCACGGACCTGTCGGGG
AGAGAGACCATGGTCCGTGTGACGGGCGGAATGAAGGTTAAAGCTGACCG
CGACGAGGCATCGCCCTACGCGGCCATGCTTGCCGCTCAGGACGTGGCCG
CCCGCTGCAAGGTGAACACGAGCAGCTTGGCCTGTGCGACAAGATACAAA
AACGCCGCTGAACCATCAAATAATATCGGCCTAGTTCAGTCAACCCTGCT
ACCTCTCTTTGCCGAGATTTGGCGCGCAGCCGAATTTGAAGCGGCTTTGC
TCTCGATGCTTCCAAACTCATAAACGTTCACCGGCAAACGAACGACTAGG
CCGGTTTGTTTGACGAGACTTATAACAATAATATAGTAAAAGATCCCTCT
CATCCCTTAGCAATGGCTTTGGGTCGCAGCTGTCGACAATCGATGGGCCG
AACAAGCGCATATCTGACCAGATGTTTCAGATGTTTCAGCATGGCCCCGT
CCAAGTTTTGGAGGCACCCCTTGTAACGGATGCCTACGTGGATGTGGAGC
CTTGATGTCACTCTCTATTACTTGTTGCACCCTGGTGGGTTTTGACAGGA
GCTGGGCATCACCGCCCTCCACATCAAGATGCGCGCTACGGGGGGTAACA
AGACCAAGACCCCCGGACCCGGCGCGCAGTCTGCTCTCCGCGCCCTCGCT
CGTGCGGGCATGAAGGTGAAATATTCGTGGGCCTGGTCAAAAAGCAGTCC
GCGCGATTGACCGGCGTCGCAGATATTATTCTGCCACGTGCGCGGGTGGT
CGACACATTCTGATCTTATTGCGAGAAACGTCGGCAGTGTTGATACGTAG
TAACCTCTGGTGACTCGTGAACCTTTGTGTCGAACCTCGAACACGGTCCA
TTAGGACTCCAGCAAAGGTGGGTAAGAAACGGGGTTGGTTTGACTGGGCA
TACTGTTATTGGACGCCGTCACAGGTTTGTCGACCCGCAGACGTGAGTCT
GAGACAATGTATAGAGTCTTGGTCGATATAGTGAGCCGACTCGATAACCA
GACCTCGCCCCCCTTCTACCCCTTCCCACCTTTGTCCGACTACTCTCAAT
ATCTTCCAAGATCGGTCGCATCGAAGACGTGACCCCGATCCCCACGGACT
GCACTCGCCGGAAGGGTGGTCGCCGTGGTCGGCGTCTCTGAGCCGTGGTG
TTGTCCAAGGGATTTCGCATCATCGCGTTTGGGATGCTCTACCTTCAATT
CTTTGTCAAATACGCCATCGGGGTTTCCTAGATAATTTTGCGGATTTGCT
GCATCGAGGTCAGGGCTTTGTTGGTGCAGATTTACACTTGACGGAGAAAG
AAGAGAGTACACGTCGTGTAGCGCATGATGTTTGGGAGCTGCTTTGAAAC
GAGGGTGCAATAACAGCAATATCAAAGAAAAGTTGTCAACCGAACTAGAC
TATCCTCTTTACTGCCAACTGGTCACCTGTGGTGTGGCATAGAGTCGCGT
GACCGGTGTGATCATCAGTCATCATGAGCGTCATGAAGAGGGGCTTCACC
CCGTGATGATCTGGATATCATACCGGATGTAGCACGTAGCTGGAATCAGC
AATCGAGACCGCCTACAACTCTAACACCACCCACATAGATTCCATGTCTC
CGGCACCCTACGAAATTAGTTCAGCTGAACCAACCCAGGAAAGACTAATA
CTACTATTAATAGACAGATTTGTCGTGGATCGTAGTATTAATAGTTGACA
CTGCCATGAAAATGGAGGATCTCGAAATCTTCTTCGAACTTACCATCACC
TGAGGTGGGGCGTGGAAAGAATTCGTGACTCCAGTGCTGTAATACTGTTT
GCCTCCGATTTTTTCTGTATCGCACACAGTAACATAACCACTACATGGTA
CATGGTAGATGTCATTGGTGGTGGGTGTAGGAAAAGAGAGGCATCCAAAC
TGGTCCATGGTGAATTACTTGTGAAGGCTGCACCCGTTACTCTTGCTACT
GTACTGTACTGTACTGTACCTTGAAGACTACTGGTCTTGTGCCATCGGTA
CGCAATTGCGCGACCCGGTTAACTCGTGATGTATGTGGACGCCGTCGCGG
AAAGCGGGTGGAAACCCGTAAGTAAGCGCCAGATAACGCCTCGGTGTAAA
GAATGAGTAGGCTTACGCGAGACCAACTCCTCAGGCGTGAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig71:701578..705618-

>mRNA_F-serratus_M_contig71.18300.1 ID=mRNA_F-serratus_M_contig71.18300.1|Name=mRNA_F-serratus_M_contig71.18300.1|organism=Fucus serratus male|type=CDS|length=600bp|location=Sequence derived from alignment at F-serratus_M_contig71:701578..705618- (Fucus serratus male)
ATGGTCCGTGTGACGGGCGGAATGAAGGTTAAAGCTGACCGCGACGAGGC
ATCGCCCTACGCGGCCATGCTTGCCGCTCAGGACGTGGCCGCCCGCTGCA
AGATGGTCCGTGTGACGGGCGGAATGAAGGTTAAAGCTGACCGCGACGAG
GCATCGCCCTACGCGGCCATGCTTGCCGCTCAGGACGTGGCCGCCCGCTG
CAAGGAGCTGGGCATCACCGCCCTCCACATCAAGATGCGCGCTACGGGGG
GTAACAAGACCAAGACCCCCGGACCCGGCGCGCAGTCTGCTCTCCGCGCC
CTCGCTCGTGCGGGCATGAAGGAGCTGGGCATCACCGCCCTCCACATCAA
GATGCGCGCTACGGGGGGTAACAAGACCAAGACCCCCGGACCCGGCGCGC
AGTCTGCTCTCCGCGCCCTCGCTCGTGCGGGCATGAAGATCGGTCGCATC
GAAGACGTGACCCCGATCCCCACGGACTGCACTCGCCGGAAGGGTGGTCG
CCGTGGTCGGCGTCTCTGAATCGGTCGCATCGAAGACGTGACCCCGATCC
CCACGGACTGCACTCGCCGGAAGGGTGGTCGCCGTGGTCGGCGTCTCTGA
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