mRNA_F-serratus_M_contig7077.18278.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig7077.18278.1
Unique NamemRNA_F-serratus_M_contig7077.18278.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig7077.18278.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 4.980e-77
Identity = 188/479 (39.25%), Postives = 253/479 (52.82%), Query Frame = 1
Query:   16 YFKGAALREMREARRDFILYLQDRWNVLDVLSLVMLAGGFFVRFRDSGSPWGRALYALSAPLVFLRLLFYAQYLPFLGSMVEVIFGMVVVLVRFALILFLVIMGFAMALLSLLRDADNFNFGDILLILFKTLLGDVEAFEEFDDNAGNRYSFTGNLLLVLYLVVMTIMLLNLLIAVLSAAHAKVEMNADKELEVAKVRVVEHYRLVVASDIIPAPFNLVQIILMKLLSFVFVRQPANRGRRCREIGQTVGQVSFWLVLSPVVVILGTLLWAASSIYTPFVPAADLVNRVPSASTLRDSLSEGPPFTRFFTGFLSIYSLLFPARESLQPANRLAKSKAIRLHIGVGVFCALGAPFCLLFLWLREPCLQVFQFIARLTRLRGESRRINSSNEDSVDANEQSTSMLEATGDGPQLSRHDNTDAQVHSILESTGLEASKLKKYLEDPMIDPEVRPDEIKLGATVEHMKLLRNVLEKKFSDRVD 1452
            Y     + E +E RRDF LY  D WN+LD+L L ++ GG  VR  D  + WGRALYALSAPL+F RLLF+AQ L F G M++V+F M   LV+F +++ +V++GFAM+  +L  D D F  G   L LFK +LG+V+ F  F    GN+Y      L V+YLVV+ +MLLNLLIAVLS +H+KVE  AD+E +V+K R++EHYR+VV   ++P PFNLVQ+IL      V VR  + +G       + VG+++FWL L PV    GT+LW  SS++ PFV      ++   A   R +LS G    R+   F                                  +C LGAP  L+  WL  P   +          R ++  I S N  SV+       +LE                       S GL A  L+ YLEDP+ DPEVRPDE +   TVE++K LRN LEK     +D
Sbjct:  847 YILAGIITEGQEMRRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTF--GGTCLTLFKAMLGEVDFFGSFP---GNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILSLP---VMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTVLWVLSSLFAPFVWHTHFYSK---AQARRGALSVGSLLVRYLIVFF---------------------------------WCVLGAPLYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWNPKSVN------DLLEGN---------------------SGGLVAGDLQMYLEDPIGDPEVRPDERRKQTTVENIKQLRNRLEKTILTHLD 1254          
BLAST of mRNA_F-serratus_M_contig7077.18278.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 1.250e-63
Identity = 179/510 (35.10%), Postives = 259/510 (50.78%), Query Frame = 1
Query:   16 YFKGAALREMREARRDFILYLQDRWNVLDVLSLVMLAGGFFVRFRDSGSPWGRALYALSAPLVFLRLLFYAQYLPFLGSMVEVIFGMVVVLVRFALILFLVIMGFAMALLSLLRDADNFNFGDILLILFKTLLGDVEAFEEFDDNAGNRYSFTGNLLLVLYLVVMTIMLLNLLIAVLSAAHAKVEMNADKELEVAKVRVVEHYRLVVASDIIPAPFNLVQIIL-MKLLSFVF--------------VRQPA--NRGR------------RCREIGQTVGQVSFWLVLSPVVVILGTLLWAASSIYTP------FVPAADLVNRVPSASTLRDSLSEGPPFTRFFTGFLSIYSLLFPARESLQPANR--LAKSKAIRLHIGVGVFCALGAPFCLLFLWLREPCLQVFQFIARLTRLRGESRRINSSNEDSVDANEQSTSMLEATGDGPQLSRHDNTDAQVHSILES--TGLEASKLKKYLEDPMIDPEVRPDEIKLGATVEHMKLLRNVLE 1428
            +    A RE RE +R    Y +D+WNVLD L ++ L  G  +R+ D  S WG A YALSAPLV  R+LF+AQ L F G MV+VIF M   L++F  ++ +V++GF MAL  + RD ++F  GD LL LFK +LG+   F+EF   +G RY     +L+V+YL ++T+MLLNLLIA+LS  HA+V+ N     +V+K R++ HYR VV +D++PAPFNLVQ++L + +++  F                +PA    GR            R R   +  GQ+ +WLVL PV V  G +LW  S  +        ++   D  +         D   +    ++    F S  S L+   + L    R  L     +       + C LGAP CL   WL  P  + F +  +L   R              D +E+S   L              +   + S+L+   +G+ A KL ++LEDPM D +VR DE +   TVEH+KLLR+ LE
Sbjct:  785 FITAGAYREGREMKRGIRAYFKDQWNVLDALGMLFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVIFRDVEDF--GDTLLGLFKAMLGETGFFDEF---SGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSLGVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAILWGLSGFFYAQYAWHSWLSTTDEQDCFFGFLLESDEEPDAEDMSKEVVMFGSCGSPLWRMLQGLGIVFRFLLEWIGVVLAWFLTFLLCILGAPCCLFLRWLVLPGTEFFSWCWKLAACRSTQ---------DPDEDEESPKRL--------------STPTIESMLKKGRSGVGAEKLLEFLEDPMNDKDVRQDEKEKKTTVEHIKLLRDRLE 1266          
BLAST of mRNA_F-serratus_M_contig7077.18278.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 2.920e-62
Identity = 179/510 (35.10%), Postives = 255/510 (50.00%), Query Frame = 1
Query:   16 YFKGAALREMREARRDFILYLQDRWNVLDVLSLVMLAGGFFVRFRDSGSPWGRALYALSAPLVFLRLLFYAQYLPFLGSMVEVIFGMVVVLVRFALILFLVIMGFAMALLSLLRDADNFNFGDILLILFKTLLGDVEAFEEFDDNAGNRYSFTGNLLLVLYLVVMTIMLLNLLIAVLSAAHAKVEMNADKELEVAKVRVVEHYRLVVASDIIPAPFNLVQIIL-----MKLLSFVFV----------RQPANR--GR------------RCREIGQTVGQVSFWLVLSPVVVILGTLLWAASSIYTPFVPAADLVNRVPSASTLRDSLSEG---PPFTRFFTGFLSIYSLLFPARESLQPANRLAKSKAIRLHIGVGVF-----CALGAPFCLLFLWLREPCLQVFQFIARLTRLRGESRRINSSNEDSVDANEQSTSMLEATGDGPQLSRHDNTDAQVHSILES--TGLEASKLKKYLEDPMIDPEVRPDEIKLGATVEHMKLLRNVLE 1428
            +    A RE RE +R    Y +D+WNVLD L ++ L  G  +R+ D  S WG A YALSAPLV  R+LF+AQ L F G MV+VIF M   L++F  ++ +V++GF MAL    RD  +F  GD LL LFK +LG+   F+EF   +G RY     +L+V+YL ++T+MLLNLLIA+LS  HA+V  N  +  +V+K R++ HYR VV +D++PAPFNLVQ+IL     +  L + F+           +PA    GR            R R   +  GQ  +WLVL  V V  G +LW+ S ++         ++     ++    L EG   P         +   S   P    LQ    + +S    + + +  F     C LGAP CL+  WL  P  + F +  +L   R              D  E   S + ++               + S+L+    G  A  L ++LEDPM D +VR DE +   TVEH+KLLR+ LE
Sbjct:  802 FITAGAYREGREMKRGIRAYFKDQWNVLDALGILFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFHGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVFFRDVADF--GDTLLGLFKAMLGETGIFDEF---SGGRYDPVATILVVVYLCIVTVMLLNLLIAILSTEHAQVMENTAEAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLILSLGVIVLTLPYYFLLEAKREHSETERPATDEDGRLFWGNVWEGARHRHRSARRAFGQFVWWLVLGSVAVAGGAMLWSLSGLFYAQYACHSWLSTTDEQNSFFGFLQEGDEEPDEEDTAKDVVVFGSCGSPLWRMLQGVRIVFRSVLQWIGVVLAWFLIFLLCILGAPCCLVLRWLILPGTEFFSWCWKLAACRSTQ-----------DPGEDKKSPMRSS------------TPTIESMLKKGCCGAGAENLLEFLEDPMNDKDVRQDEKERKTTVEHIKLLRDRLE 1283          
BLAST of mRNA_F-serratus_M_contig7077.18278.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 1.480e-59
Identity = 176/495 (35.56%), Postives = 241/495 (48.69%), Query Frame = 1
Query:   10 TAYFKGAALREMREARRDFILYLQDRWNVLDVLSLVMLAGGFFVRFRDSGSPWGRALYALSAPLVFLRLLFYAQYLPFLGSMVEVIFGMVVVLVRFALILFLVIMGFAMALLSLLRDADNFNFGDILLILFKTLLGDVEAFEEFDDNAGNRYSFTGNLLLVLYLVVMTIMLLNLLIAVLSAAHAKVEMNADKELEVAKVRVVEHYRLVVASDIIPAPFNLVQIILMKLLSFV------------FVRQPANRGRRCREIG-QTVGQVSFWLVLSPVVVILGTLLWAASSIYTPFVPAADLVNRVPSASTLRDSLSEGPPFTRFFTGFLSIYSLLFPARESLQPANRLAKSKAIRLHIGVGVFCALGAPFCLLFLWLREPCLQVFQFIARLTRLRGESRRINSSNEDSVDANEQSTSMLEATGDGPQLSRHDNTDAQVHSILEST--GLEASKLKKYLEDPMIDPEVRPDEIKLGATVEHMKLLRNVLEKKFSDRV 1449
            TA   G   RE  E  R++  YL+D+WN LD+L L+    GF  R  D     G A YALSAPL+  R LF+ Q  P  G MV  IF M  VL++F  ++ +V++GF MA   L RD D+F  G+  L LFK + G+   F  F   +G+ Y     +LLV+YL ++TI+LLNLL+A+LS +H+KV+ N D+E + +  R+++HY+LVV +DI+PAPFNL+Q+++  +   V              RQ  NRGR   E G + +G V FW+VL PV V+ GTLLW  S   TP                                  LS+Y      RE  +    L  S   R    + ++C LGAP  L  LWL                  G SRR+       V      +     T               + SIL     G+ A KL+++L+DPM D +VR DE     TVEH+KLLRN LE    D +
Sbjct:  606 TAVIAGGMYREWFEMARNYGRYLEDQWNALDLLGLLFFTIGFIARVVDWTQQLGPAFYALSAPLLVSRALFFVQIHPLQGPMV--IFRMTTVLLKFGFVMAVVMIGFTMAFHVLFRDFDSF--GESFLELFKAMFGETTFFNAF---SGDTYDAVATMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQLVVWPIAWCVGGCCGRSTSGSQSTRQELNRGREAYERGNKAIGPVVFWVVLGPVAVVGGTLLWIVS---TP----------------------------------LSVYLWRKHHREGDRKRLSLI-SLGCRYFFIIPLWCILGAPVYLFVLWL------------------GASRRLLCRCNYDVSIAHAESGHFRCT---------------IESILLEGPGGVGAKKLREFLDDPMDDKDVRQDERDKRTTVEHVKLLRNRLENTIQDEL 1022          
BLAST of mRNA_F-serratus_M_contig7077.18278.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 4.750e-57
Identity = 165/497 (33.20%), Postives = 247/497 (49.70%), Query Frame = 1
Query:   16 YFKGAALREMREARRDFILYLQDRWNVLDVLSLVMLAGGFFVRFRDSGSPWGRALYALSAPLVFLRLLFYAQYLPFLGSMVE-----------VIFGMVVVLVRFALILFLVIMGFAMALLSLLRDADNFNFGDILLILFKTLLGDVEAFEEFDDNAGNRYSFTGNLLLVLYLVVMTIMLLNLLIAVLSAAHAKVEMNADKELEVAKVRVVEHYRLVVASDIIPAPFNLVQIILMKLLSFVF------------VRQPANRGRRCREIG-QTVGQVSFWLVLSPVVVILGTLLWAASSIYTPFVPAADLVNRVPSASTLRDSLSEGPPFTRFFTGFLSIYSLLFPARESLQPANRLAKSKAIRLHIGVGVFCALGAPFCLLFLWLREPCLQVFQFIARLTRLRGESRRINSSNEDSVDANEQSTSMLEATGDGPQLSRHDNTDAQVHSILEST--GLEASKLKKYLEDPMIDPEVRPDEIKLGATVEHMKLLRNVLE 1428
            +  G   +E RE  R+F  Y +D+WN LD+LSL+ L  G   R  D  S  G A YAL+APL+  R LF+ Q  P  G M++           V+F M  +L++F  ++ ++++GF MA   L RD D+F  G+  L LFK +LGD + F+ F   +G+ Y      LLV+YL ++T+MLLNLL+A+LS +HA+V  N ++E +V+  R+++HY+LVV +D++P PFNL+Q+I+  +   +              +Q  NR +     G + +G V FW+VL PV VI G+LLW  S      +PA     +       RD+       +         Y ++ P                         +C  GAP  LL LWL                    SRR+ S        N+ + S  +        SRH  + + + S+L  +  G+ A KL+++L+DPM D +VR DE     TVEH+KLLRN LE
Sbjct:  787 FIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTIGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPMIQASGETKRFPQRVVFRMTRILLKFGFVMAVIVLGFTMAFHVLFRDFDSF--GESFLDLFKAMLGDTDFFKVF---SGDTYDVVATFLLVVYLFIVTVMLLNLLVAILSTSHAQVAENIEREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLIVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIGPVVFWVVLGPVAVIGGSLLWMGS-----VLPAMYFWRKHHRLQNKRDNGGGDSKRSMHLWSLFLRYVVIIPC------------------------WCVFGAPVYLLLLWLNA------------------SRRVLSR----CPCNDDTRSTAK--------SRHGASKSTIESMLLKSPGGVGAQKLREFLDDPMDDKDVRQDEKDRRTTVEHIKLLRNRLE 1219          
BLAST of mRNA_F-serratus_M_contig7077.18278.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 3.410e-54
Identity = 160/502 (31.87%), Postives = 250/502 (49.80%), Query Frame = 1
Query:   16 YFKGAALREMREARRDFILYLQDRWNVLDVLSLVMLAGGFFVRFRDSGSPWGRALYALSAPLVFLRLLFYAQYLPFLGSMVE----------------VIFGMVVVLVRFALILFLVIMGFAMALLSLLRDADNFNFGDILLILFKTLLGDVEAFEEFDDNAGNRYSFTGNLLLVLYLVVMTIMLLNLLIAVLSAAHAKVEMNADKELEVAKVRVVEHYRLVVASDIIPAPFNLVQIILMKLLSFVF------------VRQPANRGRRCREIG-QTVGQVSFWLVLSPVVVILGTLLWAASSIYTPFVPAADLVNRVPSASTLRDSLSEGPPFTRFFTGFLSIYSLLFPARESLQPANRLAKSKAIRLHIGVGVFCALGAPFCLLFLWLREPCLQVFQFIARLTRLRGESRRINSSNEDSVDANEQSTSMLEATGDGPQLSRHDNTDAQVHSILEST--GLEASKLKKYLEDPMIDPEVRPDEIKLGATVEHMKLLRNVLE 1428
            +  G   +E RE  R+F  Y +D+WN LD+LSL+ L  G   R  D  S  G A YAL+APL+  R LF+ Q  P  G +++                V+F M  +L++F  ++ ++++GF MA     RD D+F  G+  L LFK +LGD + F+ F   +G+ Y F    LLV+ L ++T+MLLNLL+A+LS +HA+V  N D+E +V+  R+++HY+LVV +D++P PFNL+Q+++  +   +              +Q  NR +     G + +  V FW+VL PV V  G+LLW  S      +PA     +      L++    G   ++      S++                     +R ++ +  +C  GAP  LL LWL                    S R+ S        N+ ++S  +        SRH  + + + S+L  +  G+ A KL+++L+DPM D +VR DE     TVEH+KLLRN LE
Sbjct:   56 FIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTVGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPIIQASGEFRQVAKRNVSHSVVFRMTRILLKFGFVMAVILLGFIMAFHVQFRDFDSF--GESFLDLFKAMLGDNDFFKVF---SGDTYDFVATFLLVVGLFIVTVMLLNLLVAILSTSHAQVAENIDREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLVVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIEPVVFWVVLGPVAVNGGSLLWMES-----VLPAMYFWRK---HHRLQNKRENGGGDSKKSMHLWSLF---------------------LRYNVIIPCWCVFGAPVYLLLLWLNA------------------SGRVLSR----CPCNDDASSTAK--------SRHGASKSTIESMLLKSPGGVGAQKLREFLDDPMDDKDVRQDEKDRRTTVEHIKLLRNRLE 493          
BLAST of mRNA_F-serratus_M_contig7077.18278.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 1.660e-49
Identity = 164/526 (31.18%), Postives = 249/526 (47.34%), Query Frame = 1
Query:   10 TAYFKGAALREMREARRDFILYLQDRWNVLDVLSLVMLAGGFFVR-FRDSGSPWGRALYALSAPLVFLRLLFYAQYLPFLGSMVEVIFGMVVVLVRFALILFLVIMGFAMALLSLLRDADNFNFGDILLILFKTLLGDVEAFEEFDDNAGNRYSFTGNLLLVLYLVVMTIMLLNLLIAVLSAAHAKVEMNADKELEVAKVRVVEHYRLVVASDIIPAPFNLVQII-----LMKLLSFVFVRQPAN--------------------------RGRRCREIGQTV----GQVSFWLVLSPVVVILGTLLWAASSIYTPFVPAADLVNRVPSASTLRDSLSEGPPFTRFFTGFLSIYSLLFPARESLQPANRLAKSKAIRLHIGVGVFCALGAPFCLLFLWLREPCLQVFQFIARL------------TRLRGESRRINSSNEDSVDANEQSTSMLEATGDGPQL---SRHDNTDAQVHSILEST--GLEASKLKKYLEDPMIDPEVRPDEIKLGATVEHMKLLRNVLE 1428
            T Y  G  L E RE   D   Y++D+WN+LDV SL +L GG   R +        RALYALSAPL F R+LF+AQ LP  G M++V+F M  +L +F +I+ LV++GF  +  SL ++   +  G++   +F+  LG+ +  ++F   +G  +     +LLV+YLV++TIM+LNLL+AVLS AHAKV+ NA  E +V + R+++HY  VV  D +P PFNL Q I     ++  L F   R+P+                           + +R R   +      G+++FW +L P+ V+ G +LW  S +  P V                                      ++          R+A     R+ + + V CA+GAPF  L +W+R     V + +  L               RG+ R               +T+ + A G    +      D+ +  V  +L+     L  S+L+ +L+DPM DP+VR DE     TVEH+KLLRN LE
Sbjct: 1162 TMYIFGGILTEFREILEDPWEYMRDQWNLLDVTSLTLLLGGAIQRMYGQVDDESSRALYALSAPLAFARILFFAQILPSQGPMIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTAY--GEVWKAIFRATLGETDYLDDF---SGTTFDGVATVLLVVYLVLLTIMMLNLLVAVLSTAHAKVDANAGLEYKVTRARLIQHYVNVVEIDRLPPPFNLFQWIFALPFMVLDLCFRTSRRPSTASTNSAXXXXXXXXXXXXXXSINGNEKTKRDRSYFKVARGFFGRLAFWAMLGPIAVLAGWVLWMISIVKAPVV--------------------------------------VWQTSGDKSLGGRIA-----RMLLVIFV-CAVGAPFWHLVMWVRGGVAGVRRTMRALGCXXXXXXXXXXXXKRGDGRT--------------TTASITARGSPATIVAEGAEDDMEKVVPIVLQEADGALTTSELQIFLDDPMSDPDVRRDEETRATTVEHIKLLRNRLE 1624          
BLAST of mRNA_F-serratus_M_contig7077.18278.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 7.290e-46
Identity = 114/274 (41.61%), Postives = 160/274 (58.39%), Query Frame = 1
Query:   16 YFKGAALREMREARRDFILYLQDRWNVLDVLSLVMLAGGFFVRFRDSGSPWGRALYALSAPLVFLRLLFYAQYLPFLGSMVEVIFGMVVVLVRFALILFLVIMGFAMALLSLLRDADNFNFGDILLILFKTLLGDVEAFEEFDDNAGNRYSFTGNLLLVLYLVVMTIMLLNLLIAVLSAAHAKVEMNADKELEVAKVRVVEHYRLVVASDIIPAPFNLVQIILMKLLSFVFVRQPANRGRRCREIGQTVGQVSFWLVLSPVVVILGTLLWAASS 837
            Y   A + E  E  +D   YL DRW     L+LV+    F  R  D  S WGR LYA+ +PL++ RLL+YAQ +P  GS ++V++GM   L +F +++ +VI+GFAM+  +L RD         LL  F+ +LG+V  F++F    G ++     +LLV YLVVMTIMLLNLLIAVLS AH KVE      + V++ RV  HYR VVA+D +PAPFNL Q++++     V V    N     R     VG++ FWL+L P  ++ G  +W  S+
Sbjct:  608 YVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDPDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYGMASELGQFFVVMGVVILGFAMSFFALFRDVKGETIRGALLDAFQAMLGEVGLFDDF---VGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCKMVDVLFKGNTYPIARR---GVGRIVFWLLLGPGAILGGVFVWLVST 873          
BLAST of mRNA_F-serratus_M_contig7077.18278.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 2.700e-45
Identity = 113/274 (41.24%), Postives = 161/274 (58.76%), Query Frame = 1
Query:   16 YFKGAALREMREARRDFILYLQDRWNVLDVLSLVMLAGGFFVRFRDSGSPWGRALYALSAPLVFLRLLFYAQYLPFLGSMVEVIFGMVVVLVRFALILFLVIMGFAMALLSLLRDADNFNFGDILLILFKTLLGDVEAFEEFDDNAGNRYSFTGNLLLVLYLVVMTIMLLNLLIAVLSAAHAKVEMNADKELEVAKVRVVEHYRLVVASDIIPAPFNLVQIILMKLLSFVFVRQPANRGRRCREIGQTVGQVSFWLVLSPVVVILGTLLWAASS 837
            Y   A + E  E  +D   YL DRW     L+LV+    F  R  DS S WGR LYA+ +PL++ RLL+YAQ +P  GS ++V++ M   L +F +++ +VI+GFAM+  +L RD         LL  F+ +LG+V  F++F    G ++     +LLV YL+VMTIMLLNLLIAVLS AH KVE      + V++ RV  HYR VVA+D +PAPFNL Q++++     V +   +N     R     VG++ FWLVL P  ++ G  +W  S+
Sbjct:  699 YVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDSDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVMGVVILGFAMSFFALFRDVKGETLRGALLDAFQAMLGEVGLFDDF---VGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCQMVDLLFKSNTYPIARR---GVGRIVFWLVLGPGAILGGIFVWLVST 964          
BLAST of mRNA_F-serratus_M_contig7077.18278.1 vs. uniprot
Match: D7FMG5_ECTSI (Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG5_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 8.000e-39
Identity = 105/278 (37.77%), Postives = 169/278 (60.79%), Query Frame = 1
Query:    7 LTAYFKGAALREMREARRDFILYLQDRWNVLDVLSLVMLAGGFFVRFRDSGSPWGRALYALSAPLVFLRLLFYAQYLPFLGSMVEVIFGMVVVLVRFALILFLVIMGFAMALLSLLRDADNFNFGDILLILFKTLLGDVEAFEE-FDDNAGNRYSFTGNLLLVLYLVVMTIMLLNLLIAVLSAAHAKVEMNADKELEVAKVRVVEHYRLVVASDIIPAPFNLVQIILMKLLSFVFVRQPANRGRRCREIGQTVGQVSFWLVLSPVVVILGTLLWAASS 837
            LT +     +  + + R  F+ + +D+WN L+ LSL++LAGG  +R R+S    GRAL+ALSAPLVF R+LF+ Q+L   G +++++  +   +++FAL+L  ++MGF ++  +L  +A ++  GD+ L +FK +LG+V  F E ++D+    Y     +LLV+YL V+ +MLLNLLIAVLS  HAKV+   D     +KVR+++ Y  +V SD++P+PFNL QI +  +   V         + C +I +      FWL L    +++   LWAAS+
Sbjct:  529 LTFHVMAEIVSNLLQMRAGFVEFWRDKWNWLESLSLLLLAGGLTIRIRNSDVHQGRALFALSAPLVFSRVLFFGQFLKRQGLVIQMMTILFGEMLQFALVLGTIMMGFTVSFYALFEEAKSY--GDVWLDVFKAMLGEVSVFSEIYEDSV---YRDVARVLLVVYLTVVAVMLLNLLIAVLSTEHAKVDEQQDIAFRESKVRIMKLYVRIVDSDVLPSPFNLPQIAVGLVARGV---DGLLGTKTCPKIMREFSVGVFWLTLGSPAILIAWGLWAASA 798          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7077.18278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLB1_ECTSI4.980e-7739.25Ankyrin Repeat Transient Receptor Potential Channe... [more]
D7FZR6_ECTSI1.250e-6335.10Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5KBU4_9PHAE2.920e-6235.10Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JG42_9PHAE1.480e-5935.56Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KJG3_9PHAE4.750e-5733.20Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JUV2_9PHAE3.410e-5431.87Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5LDE6_9PHAE1.660e-4931.18Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FR83_ECTSI7.290e-4641.61Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5JMG8_9PHAE2.700e-4541.24Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FMG5_ECTSI8.000e-3937.77Transient receptor potential channel n=1 Tax=Ectoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7077contigF-serratus_M_contig7077:17387..19412 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score277.7
Seed ortholog evalue1.1e-71
Seed eggNOG ortholog2880.D7FLB1
KEGG koko:K04981
KEGG TC1.A.4.5.8
KEGG Pathwayko04978,map04978
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ion channel activity
EggNOG OGsKOG3614@1,KOG3614@2759
EC2.7.11.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04040
Exons2
Model size1547
Cds size1545
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932174.0647266-CDS-F-serratus_M_contig7077:17388..186721622932174.0647266-CDS-F-serratus_M_contig7077:17388..18672Fucus serratus maleCDSF-serratus_M_contig7077 17389..18672 -
1690964183.404087-CDS-F-serratus_M_contig7077:17388..186721690964183.404087-CDS-F-serratus_M_contig7077:17388..18672Fucus serratus maleCDSF-serratus_M_contig7077 17389..18672 -
1622932174.217332-CDS-F-serratus_M_contig7077:19151..194121622932174.217332-CDS-F-serratus_M_contig7077:19151..19412Fucus serratus maleCDSF-serratus_M_contig7077 19152..19412 -
1690964183.4167678-CDS-F-serratus_M_contig7077:19151..194121690964183.4167678-CDS-F-serratus_M_contig7077:19151..19412Fucus serratus maleCDSF-serratus_M_contig7077 19152..19412 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7077.18278.1prot_F-serratus_M_contig7077.18278.1Fucus serratus malepolypeptideF-serratus_M_contig7077 17389..19412 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig7077.18278.1

>prot_F-serratus_M_contig7077.18278.1 ID=prot_F-serratus_M_contig7077.18278.1|Name=mRNA_F-serratus_M_contig7077.18278.1|organism=Fucus serratus male|type=polypeptide|length=515bp
KPLTAYFKGAALREMREARRDFILYLQDRWNVLDVLSLVMLAGGFFVRFR
DSGSPWGRALYALSAPLVFLRLLFYAQYLPFLGSMVEVIFGMVVVLVRFA
LILFLVIMGFAMALLSLLRDADNFNFGDILLILFKTLLGDVEAFEEFDDN
AGNRYSFTGNLLLVLYLVVMTIMLLNLLIAVLSAAHAKVEMNADKELEVA
KVRVVEHYRLVVASDIIPAPFNLVQIILMKLLSFVFVRQPANRGRRCREI
GQTVGQVSFWLVLSPVVVILGTLLWAASSIYTPFVPAADLVNRVPSASTL
RDSLSEGPPFTRFFTGFLSIYSLLFPARESLQPANRLAKSKAIRLHIGVG
VFCALGAPFCLLFLWLREPCLQVFQFIARLTRLRGESRRINSSNEDSVDA
NEQSTSMLEATGDGPQLSRHDNTDAQVHSILESTGLEASKLKKYLEDPMI
DPEVRPDEIKLGATVEHMKLLRNVLEKKFSDRVDCLKKKMDDLGEGHEKK
FSGRIDSLEKKMDDR
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mRNA from alignment at F-serratus_M_contig7077:17387..19412-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig7077.18278.1 ID=mRNA_F-serratus_M_contig7077.18278.1|Name=mRNA_F-serratus_M_contig7077.18278.1|organism=Fucus serratus male|type=mRNA|length=2026bp|location=Sequence derived from alignment at F-serratus_M_contig7077:17387..19412- (Fucus serratus male)
AAACCGCTTACCGCGTATTTCAAGGGTGCGGCCTTGAGGGAGATGAGGGA GGCGAGAAGGGACTTCATTCTTTACTTGCAAGATCGCTGGAACGTCCTGG ATGTACTTTCTCTCGTGATGCTAGCCGGGGGATTTTTTGTCCGATTCAGA GACAGCGGCAGTCCATGGGGGCGAGCTCTATATGCTTTGAGTGCCCCGCT GGTGTTTTTGCGCCTCCTGTTCTACGCACAATACCTGCCGTTTCTGGGGT CGATGGTAGAGGTGAGTGATCATCTTTTCAGAAGAACCAAACGAGATATA TTTTTAACTGACTAAAGTATGTTGTTAATGTCGACACAAATTTAGATCAA ATATTAAAAACTCGAGACTAGCACATCACCATGATGAGGTGCAGTCTTAC AGGCCCTTGCCGTTTTCGCCGTAAAAACACGAGCTCGTTAACAACTTCGG ACATTCCGGTCAAACCCTTACAACTCTTAAGAGTACTCTAGTGGGCAGCC TTCCGATCAACCCTTTCTTGTTCGGCATAAGGCCTAGAGGGTAACCAGCA GTATTATTATGTTGAGTTCAACCATTCAAGCAAAGGTCAGCGTCGTGTGC TACAAGATATTGCATTGACCCCTCTGTGAAACTTTACTCTAAATATTTCC TAACTTATGATAACGTTTTTTATTGAGTTTAAGTTCGTGCTCAATTTAGT TCCTGTTTTTTCCCCGTCACCACTTACCTCACTTCTGCAGGTGATATTCG GCATGGTCGTGGTGCTCGTACGGTTCGCACTGATCCTATTTCTGGTCATA ATGGGATTCGCGATGGCGCTTTTGTCGCTCTTGCGGGATGCCGACAACTT CAACTTCGGAGACATATTGCTTATCCTTTTCAAAACTCTACTGGGCGACG TGGAAGCCTTCGAGGAGTTTGACGATAACGCAGGAAACCGCTATTCATTT ACCGGCAATCTGCTGCTGGTCCTGTACCTCGTGGTTATGACAATCATGTT ACTTAACCTTCTCATCGCGGTTCTAAGTGCGGCGCACGCCAAGGTGGAGA TGAATGCTGACAAGGAGTTAGAGGTCGCGAAAGTTAGGGTAGTTGAGCAT TACCGGCTGGTCGTGGCGTCAGACATCATTCCCGCGCCTTTCAATTTAGT GCAAATCATCTTGATGAAACTACTATCGTTCGTTTTCGTGCGCCAACCAG CAAATCGAGGAAGAAGATGCCGTGAAATCGGCCAAACAGTTGGGCAAGTC TCTTTCTGGCTAGTTCTGAGCCCGGTAGTTGTCATCTTGGGAACTCTTTT ATGGGCCGCCTCTAGCATATATACTCCTTTTGTTCCTGCCGCGGACTTGG TTAATCGTGTCCCATCCGCGTCAACCCTAAGGGATTCCCTTAGTGAAGGA CCTCCCTTCACGAGATTCTTCACGGGATTTTTGAGTATTTACAGTCTCCT TTTCCCAGCAAGGGAGTCGCTGCAACCTGCAAACCGCCTTGCAAAGTCGA AGGCGATACGCCTACACATTGGGGTGGGGGTGTTTTGTGCTTTGGGTGCC CCTTTCTGCCTCTTGTTTTTGTGGCTAAGGGAACCCTGCTTGCAGGTCTT TCAATTCATCGCCCGTTTGACACGTCTTCGAGGAGAGTCGAGGCGAATAA ACTCTTCAAATGAAGATAGTGTAGACGCTAACGAGCAAAGTACAAGTATG TTGGAAGCTACCGGTGACGGACCTCAGCTTTCGAGGCACGACAACACGGA CGCTCAAGTACACAGTATATTAGAATCGACAGGTCTCGAAGCTAGTAAGT TGAAGAAATATCTGGAGGATCCCATGATCGACCCCGAAGTGCGGCCTGAC GAGATCAAGCTTGGTGCCACTGTCGAGCACATGAAGCTCTTGAGAAATGT GCTCGAGAAGAAATTCAGCGACCGTGTGGACTGCCTTAAGAAGAAAATGG ACGATCTCGGTGAAGGCCATGAGAAGAAGTTCAGCGGCCGTATTGACAGT CTGGAGAAGAAAATGGACGATCGCGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig7077:17387..19412-

>mRNA_F-serratus_M_contig7077.18278.1 ID=mRNA_F-serratus_M_contig7077.18278.1|Name=mRNA_F-serratus_M_contig7077.18278.1|organism=Fucus serratus male|type=CDS|length=3090bp|location=Sequence derived from alignment at F-serratus_M_contig7077:17387..19412- (Fucus serratus male)
AAACCGCTTACCGCGTATTTCAAGGGTGCGGCCTTGAGGGAGATGAGGGA
GGCGAGAAGGGACTTCATTCTTTACTTGCAAGATCGCTGGAACGTCCTGG
ATGTACTTTCTCTCGTGATGCTAGCCGGGGGATTTTTTGTCCGATTCAGA
GACAGCGGCAGTCCATGGGGGCGAGCTCTATATGCTTTGAGTGCCCCGCT
GGTGTTTTTGCGCCTCCTGTTCTACGCACAATACCTGCCGTTTCTGGGGT
CGATGGTAGAGAAACCGCTTACCGCGTATTTCAAGGGTGCGGCCTTGAGG
GAGATGAGGGAGGCGAGAAGGGACTTCATTCTTTACTTGCAAGATCGCTG
GAACGTCCTGGATGTACTTTCTCTCGTGATGCTAGCCGGGGGATTTTTTG
TCCGATTCAGAGACAGCGGCAGTCCATGGGGGCGAGCTCTATATGCTTTG
AGTGCCCCGCTGGTGTTTTTGCGCCTCCTGTTCTACGCACAATACCTGCC
GTTTCTGGGGTCGATGGTAGAGGTGATATTCGGCATGGTCGTGGTGCTCG
TACGGTTCGCACTGATCCTATTTCTGGTCATAATGGGATTCGCGATGGCG
CTTTTGTCGCTCTTGCGGGATGCCGACAACTTCAACTTCGGAGACATATT
GCTTATCCTTTTCAAAACTCTACTGGGCGACGTGGAAGCCTTCGAGGAGT
TTGACGATAACGCAGGAAACCGCTATTCATTTACCGGCAATCTGCTGCTG
GTCCTGTACCTCGTGGTTATGACAATCATGTTACTTAACCTTCTCATCGC
GGTTCTAAGTGCGGCGCACGCCAAGGTGGAGATGAATGCTGACAAGGAGT
TAGAGGTCGCGAAAGTTAGGGTAGTTGAGCATTACCGGCTGGTCGTGGCG
TCAGACATCATTCCCGCGCCTTTCAATTTAGTGCAAATCATCTTGATGAA
ACTACTATCGTTCGTTTTCGTGCGCCAACCAGCAAATCGAGGAAGAAGAT
GCCGTGAAATCGGCCAAACAGTTGGGCAAGTCTCTTTCTGGCTAGTTCTG
AGCCCGGTAGTTGTCATCTTGGGAACTCTTTTATGGGCCGCCTCTAGCAT
ATATACTCCTTTTGTTCCTGCCGCGGACTTGGTTAATCGTGTCCCATCCG
CGTCAACCCTAAGGGATTCCCTTAGTGAAGGACCTCCCTTCACGAGATTC
TTCACGGGATTTTTGAGTATTTACAGTCTCCTTTTCCCAGCAAGGGAGTC
GCTGCAACCTGCAAACCGCCTTGCAAAGTCGAAGGCGATACGCCTACACA
TTGGGGTGGGGGTGTTTTGTGCTTTGGGTGCCCCTTTCTGCCTCTTGTTT
TTGTGGCTAAGGGAACCCTGCTTGCAGGTCTTTCAATTCATCGCCCGTTT
GACACGTCTTCGAGGAGAGTCGAGGCGAATAAACTCTTCAAATGAAGATA
GTGTAGACGCTAACGAGCAAAGTACAAGTATGTTGGAAGCTACCGGTGAC
GGACCTCAGCTTTCGAGGCACGACAACACGGACGCTCAAGTACACAGTAT
ATTAGAATCGACAGGTCTCGAAGCTAGTAAGTTGAAGAAATATCTGGAGG
ATCCCATGATCGACCCCGAAGTGCGGCCTGACGAGATCAAGCTTGGTGCC
ACTGTCGAGCACATGAAGCTCTTGAGAAATGTGCTCGAGAAGAAATTCAG
CGACCGTGTGGACTGCCTTAAGAAGAAAATGGACGATCTCGGTGAAGGCC
ATGAGAAGAAGTTCAGCGGCCGTATTGACAGTCTGGAGAAGAAAATGGAC
GATCGCGTGATATTCGGCATGGTCGTGGTGCTCGTACGGTTCGCACTGAT
CCTATTTCTGGTCATAATGGGATTCGCGATGGCGCTTTTGTCGCTCTTGC
GGGATGCCGACAACTTCAACTTCGGAGACATATTGCTTATCCTTTTCAAA
ACTCTACTGGGCGACGTGGAAGCCTTCGAGGAGTTTGACGATAACGCAGG
AAACCGCTATTCATTTACCGGCAATCTGCTGCTGGTCCTGTACCTCGTGG
TTATGACAATCATGTTACTTAACCTTCTCATCGCGGTTCTAAGTGCGGCG
CACGCCAAGGTGGAGATGAATGCTGACAAGGAGTTAGAGGTCGCGAAAGT
TAGGGTAGTTGAGCATTACCGGCTGGTCGTGGCGTCAGACATCATTCCCG
CGCCTTTCAATTTAGTGCAAATCATCTTGATGAAACTACTATCGTTCGTT
TTCGTGCGCCAACCAGCAAATCGAGGAAGAAGATGCCGTGAAATCGGCCA
AACAGTTGGGCAAGTCTCTTTCTGGCTAGTTCTGAGCCCGGTAGTTGTCA
TCTTGGGAACTCTTTTATGGGCCGCCTCTAGCATATATACTCCTTTTGTT
CCTGCCGCGGACTTGGTTAATCGTGTCCCATCCGCGTCAACCCTAAGGGA
TTCCCTTAGTGAAGGACCTCCCTTCACGAGATTCTTCACGGGATTTTTGA
GTATTTACAGTCTCCTTTTCCCAGCAAGGGAGTCGCTGCAACCTGCAAAC
CGCCTTGCAAAGTCGAAGGCGATACGCCTACACATTGGGGTGGGGGTGTT
TTGTGCTTTGGGTGCCCCTTTCTGCCTCTTGTTTTTGTGGCTAAGGGAAC
CCTGCTTGCAGGTCTTTCAATTCATCGCCCGTTTGACACGTCTTCGAGGA
GAGTCGAGGCGAATAAACTCTTCAAATGAAGATAGTGTAGACGCTAACGA
GCAAAGTACAAGTATGTTGGAAGCTACCGGTGACGGACCTCAGCTTTCGA
GGCACGACAACACGGACGCTCAAGTACACAGTATATTAGAATCGACAGGT
CTCGAAGCTAGTAAGTTGAAGAAATATCTGGAGGATCCCATGATCGACCC
CGAAGTGCGGCCTGACGAGATCAAGCTTGGTGCCACTGTCGAGCACATGA
AGCTCTTGAGAAATGTGCTCGAGAAGAAATTCAGCGACCGTGTGGACTGC
CTTAAGAAGAAAATGGACGATCTCGGTGAAGGCCATGAGAAGAAGTTCAG
CGGCCGTATTGACAGTCTGGAGAAGAAAATGGACGATCGC
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