mRNA_F-serratus_M_contig704.18238.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig704.18238.1 vs. uniprot
Match: A0A6H5KUE0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUE0_9PHAE) HSP 1 Score: 369 bits (947), Expect = 4.470e-115 Identity = 201/386 (52.07%), Postives = 255/386 (66.06%), Query Frame = 3
Query: 462 EELWVVGRAMDGIEERLTAKQERLRIREIGVIERSSAVISTLDGSLEAREDDEFLEWLTAQKSLSSAPAGE----------EKATGT---NSGERVDEPGGARWERERVTNLLSETAARLDDLVAPKEESLFGEKEEPSATAGGVTKGSGPDAGGGAPEGGVLASSPPVSP---EEKLYQAKLALHRAMLSRCLSILSESLRKEQLKPGINVEQIADAARSAYLAGPHERLGTLFPLFDTHGDGHLDADGVERVVDAAVLSVASTAERCYGVAARQVLDKKSAKAMPKTMKYALMDALQVPLKRRCAFAWAENRKQVGPDEWRVSWEQFAPSRRLNYPEYDSTAANYMSDYSRQRSEWHEQRKSSRITNVYGTVLFFGVMAVDYLL 1571
EELW+VGR +D ++ RL AKQE++R+ EIGVIER +AV+S LDGSLE RE DEFL WL +Q ++P + E A GT N GGA ER V LS +ARL+ LV KE++LFG++ E A KG GG + P VSP +E LYQA+L HRAML LS+LS SL K+QLK G+++ ++ A RSAYLA P +RL ++PLFDTHGDGHLD + V+ VDA VLSV + +ERCY AAR LDKK+A MP TMKY L D ++VP+KRRC+FAWAENRKQVGPDEWRVSW+QFAPSRR ++PE DS A +Y++++SR+RS WH RK + VYG+ LF V+ +D LL
Sbjct: 101 EELWIVGRVLDDMDTRLGAKQEKIRVHEIGVIERFAAVVSALDGSLEPREGDEFLAWLRSQGFDDASPTPQPGGGPXXXXXETAAGTKVENKCSNGKSEGGAAEERAEVEAFLSAASARLNALVVDKEDALFGDRGEAEAEESLQAKGERGGXXXXXXXGGDASGEPVVSPNMSDEDLYQARLGAHRAMLCHFLSLLSSSLGKQQLKTGLSLGEVVAATRSAYLAAPEDRLAAVYPLFDTHGDGHLDTESVDLAVDAVVLSVTAASERCYAAAARPALDKKTAAVMPATMKYVLWDVMEVPMKRRCSFAWAENRKQVGPDEWRVSWDQFAPSRRQHFPEMDSVARDYVAEFSRRRSAWHTSRKGRKEAMVYGSALFVAVLIIDNLL 486
BLAST of mRNA_F-serratus_M_contig704.18238.1 vs. uniprot
Match: A0A836CPD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD1_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.460e-13 Identity = 38/98 (38.78%), Postives = 54/98 (55.10%), Query Frame = 3
Query: 1269 MPKTMKYALMDALQVPLKRRCAFAWAENRKQVGPDEWRVSWEQFAPSRRLNYPEYDSTAANYMSDYSRQRSEWHEQRKSSRITNVYGTVLFFGVMAVD 1562
MP ++YA D L P KRRCAFA+AE RKQVGP EW V+ + F ++R + + M +R +WH RK + +YG +LF + +D
Sbjct: 1 MPSALRYATWDRLDFPSKRRCAFAFAEGRKQVGPVEWHVTADAFLETQRTYFVDLVRVGGALMDVMEDERWQWHMLRKRRKRAAIYGALLFSATVVLD 98 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig704.18238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig704.18238.1 >prot_F-serratus_M_contig704.18238.1 ID=prot_F-serratus_M_contig704.18238.1|Name=mRNA_F-serratus_M_contig704.18238.1|organism=Fucus serratus male|type=polypeptide|length=540bp MVLISSSLRTSLVEAAMVRACRTHMIAGSSYGLRRRSFSSLLRPLRPSRPback to top mRNA from alignment at F-serratus_M_contig704:142436..148871+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig704.18238.1 ID=mRNA_F-serratus_M_contig704.18238.1|Name=mRNA_F-serratus_M_contig704.18238.1|organism=Fucus serratus male|type=mRNA|length=6436bp|location=Sequence derived from alignment at F-serratus_M_contig704:142436..148871+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig704:142436..148871+ >mRNA_F-serratus_M_contig704.18238.1 ID=mRNA_F-serratus_M_contig704.18238.1|Name=mRNA_F-serratus_M_contig704.18238.1|organism=Fucus serratus male|type=CDS|length=3240bp|location=Sequence derived from alignment at F-serratus_M_contig704:142436..148871+ (Fucus serratus male)back to top |