mRNA_F-serratus_M_contig7003.18211.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7003.18211.1 vs. uniprot
Match: A0A6H5JJH6_9PHAE (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJH6_9PHAE) HSP 1 Score: 192 bits (489), Expect = 1.310e-52 Identity = 99/110 (90.00%), Postives = 106/110 (96.36%), Query Frame = 2
Query: 2 GSERLNRSNATGDRLKETVAINKSLSSLTDVFMAISNKSSHIPFRNSKLTYLLQPALSGDGKTLMMVNLSPTEESYHESLCSLRFAAQVNQCELGRPKRHVRDM-VSPDG 328
GSERL+RSNATGDRLKETVAINKSLSSLTDVF++ISNKSSHIPFRNSKLTYLLQPALSGDGKTLMMVNLSPT++SYHESLCSLRFA+QVNQCELGRPKR +RDM S DG
Sbjct: 1177 GSERLSRSNATGDRLKETVAINKSLSSLTDVFVSISNKSSHIPFRNSKLTYLLQPALSGDGKTLMMVNLSPTDQSYHESLCSLRFASQVNQCELGRPKRQLRDMSTSSDG 1286
BLAST of mRNA_F-serratus_M_contig7003.18211.1 vs. uniprot
Match: A0A835YR54_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR54_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.440e-47 Identity = 91/120 (75.83%), Postives = 106/120 (88.33%), Query Frame = 2
Query: 2 GSERLNRSNATGDRLKETVAINKSLSSLTDVFMAISNKSSHIPFRNSKLTYLLQPALSGDGKTLMMVNLSPTEESYHESLCSLRFAAQVNQCELGRPKRHVRDMVSP--DGASTPSKGST 355
GSERL+RS ATG RLKET AINKSLS+LTDVF A++NK++H+PFRNSKLTYLLQPALSG+GKTLMMVNLSPT++SY ESLCSLRFA+QVNQCELGR KR++RD + DGAST S S+
Sbjct: 399 GSERLDRSGATGQRLKETQAINKSLSALTDVFTALANKTAHVPFRNSKLTYLLQPALSGEGKTLMMVNLSPTDDSYSESLCSLRFASQVNQCELGRAKRNIRDASATIDDGASTCSSSSS 518
BLAST of mRNA_F-serratus_M_contig7003.18211.1 vs. uniprot
Match: A0A7S2BE00_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BE00_9STRA) HSP 1 Score: 158 bits (400), Expect = 2.770e-46 Identity = 80/103 (77.67%), Postives = 91/103 (88.35%), Query Frame = 2
Query: 11 RLNRSNATGDRLKETVAINKSLSSLTDVFMAISNKSSHIPFRNSKLTYLLQPALSGDGKTLMMVNLSPTEESYHESLCSLRFAAQVNQCELGRPKRHVRDMVS 319
RL+RSNATG +LKET AINKSLS LTDVF AI +K+ H+PFRNSKLT++L PALSGDGKTLMMVNLSPTEES ESLCSLRFAA VN+CELG+PKR V+D+ S
Sbjct: 1 RLSRSNATGSQLKETQAINKSLSCLTDVFTAIGSKAGHVPFRNSKLTHILSPALSGDGKTLMMVNLSPTEESAFESLCSLRFAANVNKCELGKPKRSVKDVSS 103
BLAST of mRNA_F-serratus_M_contig7003.18211.1 vs. uniprot
Match: A0A7S3HL69_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HL69_9STRA) HSP 1 Score: 166 bits (420), Expect = 4.410e-45 Identity = 91/133 (68.42%), Postives = 104/133 (78.20%), Query Frame = 2
Query: 2 GSERLNRSNATGDRLKETVAINKSLSSLTDVFMAISNKSSHIPFRNSKLTYLLQPALSGDGKTLMMVNLSPTEESYHESLCSLRFAAQVNQCELGRPKRHVRDM------------VSPDGASTPSKGSTSSR 364
GSERL+RS ATG++LKETVAINKSLS+L DVF+AI NK SHIPFRNSKLTYLLQ ALSGDGKTLMMVNLSPT ES+ ESLCSLR A Q+NQCELG+PK+ V+++ V PD S P+ ST SR
Sbjct: 321 GSERLDRSGATGEQLKETVAINKSLSALADVFVAIGNKQSHIPFRNSKLTYLLQSALSGDGKTLMMVNLSPTLESFQESLCSLRLAKQINQCELGKPKKQVKEVTNVKESTSSKMQVCPDTPSGPTVXSTPSR 453
BLAST of mRNA_F-serratus_M_contig7003.18211.1 vs. uniprot
Match: A0A7S1U336_9STRA (Kinesin-like protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U336_9STRA) HSP 1 Score: 160 bits (406), Expect = 6.820e-45 Identity = 85/112 (75.89%), Postives = 95/112 (84.82%), Query Frame = 2
Query: 2 GSERLNRSNATGDRLKETVAINKSLSSLTDVFMAISNKSSHIPFRNSKLTYLLQPALSGDGKTLMMVNLSPTEESYHESLCSLRFAAQVNQCELGRPKRHVRDMVSPDGAST 337
GSERL+RS ATGDRLKE IN+SLS LTDVF A+ NK+ H+PFRNSKLT LLQPALSGDGKTLM+VNLSPT+ESY ESLCSLRFA+ VNQCELGRPKR ++ VS D ST
Sbjct: 156 GSERLSRSCATGDRLKEAQNINRSLSCLTDVFTALRNKAGHVPFRNSKLTQLLQPALSGDGKTLMIVNLSPTQESYQESLCSLRFASNVNQCELGRPKRQMKS-VSTDRDST 266
BLAST of mRNA_F-serratus_M_contig7003.18211.1 vs. uniprot
Match: K3WUH1_GLOUD (Kinesin-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUH1_GLOUD) HSP 1 Score: 162 bits (411), Expect = 8.760e-45 Identity = 84/107 (78.50%), Postives = 90/107 (84.11%), Query Frame = 2
Query: 2 GSERLNRSNATGDRLKETVAINKSLSSLTDVFMAISNKSSHIPFRNSKLTYLLQPALSGDGKTLMMVNLSPTEESYHESLCSLRFAAQVNQCELGRPKRHVRDMVSP 322
GSER +RSN +GDRLKET AINKSLS L DVF AI NKSSHIPFRNSKLTYLLQ +LSGDGKTLMMVNLSPT ES ESLCSLRFA QVNQCELG+PKR ++ P
Sbjct: 257 GSERASRSNVSGDRLKETQAINKSLSCLADVFTAIGNKSSHIPFRNSKLTYLLQTSLSGDGKTLMMVNLSPTLESASESLCSLRFAKQVNQCELGKPKRQIKSKKDP 363
BLAST of mRNA_F-serratus_M_contig7003.18211.1 vs. uniprot
Match: A0A7S2GW29_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GW29_9STRA) HSP 1 Score: 165 bits (417), Expect = 4.560e-44 Identity = 82/103 (79.61%), Postives = 94/103 (91.26%), Query Frame = 2
Query: 2 GSERLNRSNATGDRLKETVAINKSLSSLTDVFMAISNKSSHIPFRNSKLTYLLQPALSGDGKTLMMVNLSPTEESYHESLCSLRFAAQVNQCELGRPKRHVRD 310
GSERL+RSNATG+RL+E +INKSLS L+DVF AIS K+SHIPFRNSKLT++L PALSGDGKTLMMVNLSPT+ SYHESLCSLRFA+ VN+CELGRPKR VR+
Sbjct: 447 GSERLSRSNATGERLREAQSINKSLSCLSDVFNAISKKASHIPFRNSKLTHILSPALSGDGKTLMMVNLSPTDASYHESLCSLRFASTVNKCELGRPKRQVRE 549
BLAST of mRNA_F-serratus_M_contig7003.18211.1 vs. uniprot
Match: A0A7S2MNW6_9STRA (Kinesin-like protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MNW6_9STRA) HSP 1 Score: 159 bits (403), Expect = 6.020e-44 Identity = 79/104 (75.96%), Postives = 89/104 (85.58%), Query Frame = 2
Query: 2 GSERLNRSNATGDRLKETVAINKSLSSLTDVFMAISNKSSHIPFRNSKLTYLLQPALSGDGKTLMMVNLSPTEESYHESLCSLRFAAQVNQCELGRPKRHVRDM 313
GSERL RS ATGDR KE V+INKSLS+LTDVF AI K H+P+RNSKLTYLLQP LSGDGKTLM+VNLSPTEES ESLCSLRFA+QVNQCELG+ KR + ++
Sbjct: 115 GSERLERSGATGDRAKEAVSINKSLSALTDVFAAIGRKGGHVPYRNSKLTYLLQPCLSGDGKTLMLVNLSPTEESTQESLCSLRFASQVNQCELGKAKRTIEEL 218
BLAST of mRNA_F-serratus_M_contig7003.18211.1 vs. uniprot
Match: A0A067BSS9_SAPPC (Kinesin motor domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BSS9_SAPPC) HSP 1 Score: 154 bits (390), Expect = 1.980e-43 Identity = 80/101 (79.21%), Postives = 86/101 (85.15%), Query Frame = 2
Query: 2 GSERLNRSNATGDRLKETVAINKSLSSLTDVFMAISNKSSHIPFRNSKLTYLLQPALSGDGKTLMMVNLSPTEESYHESLCSLRFAAQVNQCELGRPKRHV 304
GSERL+RS ATGDRLKE AINKSLSSL DVF AI+ K +HIP+RNSKLTY+LQPALSGDGKTLMMVNLSPT+ S ESLCSLRFA QVNQCELG R V
Sbjct: 55 GSERLSRSGATGDRLKEAQAINKSLSSLADVFSAIAKKQNHIPYRNSKLTYVLQPALSGDGKTLMMVNLSPTDASIDESLCSLRFATQVNQCELGAAGRQV 155
BLAST of mRNA_F-serratus_M_contig7003.18211.1 vs. uniprot
Match: A0A3F2RRB6_9STRA (Kinesin-like protein (Fragment) n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRB6_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.040e-43 Identity = 81/104 (77.88%), Postives = 89/104 (85.58%), Query Frame = 2
Query: 2 GSERLNRSNATGDRLKETVAINKSLSSLTDVFMAISNKSSHIPFRNSKLTYLLQPALSGDGKTLMMVNLSPTEESYHESLCSLRFAAQVNQCELGRPKRHVRDM 313
GSER +RSN +G+RLKET AINKSLS L DVF AI NK+SHIPFRNSKLTYLLQ +LSGDGKTLMMVNLSPT ES ESLCSLRFA QVNQCELG+PKR ++
Sbjct: 247 GSERASRSNVSGERLKETQAINKSLSCLADVFNAIGNKASHIPFRNSKLTYLLQSSLSGDGKTLMMVNLSPTLESASESLCSLRFAKQVNQCELGKPKRQIKSQ 350 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7003.18211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7003.18211.1 >prot_F-serratus_M_contig7003.18211.1 ID=prot_F-serratus_M_contig7003.18211.1|Name=mRNA_F-serratus_M_contig7003.18211.1|organism=Fucus serratus male|type=polypeptide|length=96bp MAISNKSSHIPFRNSKLTYLLQPALSGDGKTLMMVNLSPTEESYHESLCSback to top mRNA from alignment at F-serratus_M_contig7003:10196..12482+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7003.18211.1 ID=mRNA_F-serratus_M_contig7003.18211.1|Name=mRNA_F-serratus_M_contig7003.18211.1|organism=Fucus serratus male|type=mRNA|length=2287bp|location=Sequence derived from alignment at F-serratus_M_contig7003:10196..12482+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7003:10196..12482+ >mRNA_F-serratus_M_contig7003.18211.1 ID=mRNA_F-serratus_M_contig7003.18211.1|Name=mRNA_F-serratus_M_contig7003.18211.1|organism=Fucus serratus male|type=CDS|length=576bp|location=Sequence derived from alignment at F-serratus_M_contig7003:10196..12482+ (Fucus serratus male)back to top |