mRNA_F-serratus_M_contig70.18195.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig70.18195.1
Unique NamemRNA_F-serratus_M_contig70.18195.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig70.18195.1 vs. uniprot
Match: A0A6H5JB15_9PHAE (AhpC-TSA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB15_9PHAE)

HSP 1 Score: 434 bits (1116), Expect = 7.170e-142
Identity = 240/381 (62.99%), Postives = 279/381 (73.23%), Query Frame = 2 
Query:  254 MGKQGELMEQMAKAKRDRLKKELEDKLRESGDLPPDLEGDTGKKPAVASGGARMKPERSWREAGAAKAAAAPSSAASASPKKGTPAETGAGGQVAATAFKAAGTAAGSGKVWPSTQPEGRSGDAYDLYDDLLEGTGSGDGKESQFSPELENPNASYEEYGAMRDKAQWDAVVSGKASVANRSPLASESEYNDFEAMLTGVVRVTPENLGPKAAEKKLIKRAEQQLPQAFSTGDFAPLDPWRLLADSEELPRGGSSQVNFGLFQGEKPLLVVVDPIPGSGEMRQAMYELNTRMPRKLVHVVAVTADSPGSNRKAAKKSRLSFPVLSDQSGEWMLAYRVTIGGQREKMAFLIEPELGRIVNVWSNFDALSLVDLVKDYISSNR 1396
            MGKQGELMEQMAKA+RDR+K+ELE+KLRESGDLP + + D  K  A     AR+KP+RSWR+AGAAK    P SA+                          G A   GKVWPST+ EGRSGD Y+ Y+ LLE TG   G  S+ SPE+ENP A Y ++  MRDKAQWDAVV+GK  V NRSP+ASE+EY+DFEAML+G  R++  +LG KAAEKKL KR E+++   FS GDFAPLDPWRLL+D +     G+  VNFGLFQG KPLLVV +P PGSG M+QAMYELNTRMPRKLV VVAVT D P SNRK AKKSR+ FPVLSD+ GEWMLAYRVT GG RE MAFLIEP+LGRIVNVWSNFDALSLVDLVK + + +R
Sbjct:    1 MGKQGELMEQMAKAQRDRMKRELEEKLRESGDLPKEEDDDAAKPAAAKGAAARIKPDRSWRQAGAAK----PPSASXXXXXX-----------XXXXXXXKTGAAGVGGKVWPSTREEGRSGDKYEEYNQLLESTGDHSG--SRKSPEVENPRAVYTDWETMRDKAQWDAVVAGKKPVVNRSPVASETEYSDFEAMLSGGARISSNSLGLKAAEKKLAKRVEKKVDLTFSRGDFAPLDPWRLLSDVDGNKASGA--VNFGLFQGTKPLLVVAEPKPGSGAMKQAMYELNTRMPRKLVDVVAVTVDPPASNRKVAKKSRILFPVLSDEGGEWMLAYRVTQGGLRENMAFLIEPDLGRIVNVWSNFDALSLVDLVKGHFNPDR 362
[Close]
BLAST of mRNA_F-serratus_M_contig70.18195.1 vs. uniprot
Match: A0A835YU18_9STRA (AhpC-TSA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU18_9STRA)

HSP 1 Score: 129 bits (323), Expect = 2.730e-29
Identity = 77/228 (33.77%), Postives = 114/228 (50.00%), Query Frame = 2 
Query:  731 GAMRDKAQWDAVVSGKASVANRSPLASESEYNDFEAMLT---------GVVRVTPENLGPKAAEKKLIKRAEQQLPQA--FSTGDFAPLDPWRL-LADSEELPRGGSSQVNFGLFQGEKPLLVVVDPIPGSGEMRQAMYELNTRMPRKLVHVVAVTADSPGSNRKAAKKSRLSFPVLSDQSGEWMLAYRVTIGGQREKMAFLIEPELGRIVNVWSNFDALSLVDLVKD 1378
            GA      W      + +V        + EY  FE +L          G +   P +L P      + + +      A  F  GDFAPL+ W   L D+E       +  ++   +G +PL+++ D  P + +MR+ + ELN R PR    +VA+T D+P  NR+ AKKS L FP+LSD+S EW+ AY VT     EKM F++EP  GR   V  + D+LS+V+ VK+
Sbjct:   64 GAPVANTDWRTGQKLQPTVVEVEEATVQEEYALFEDLLEKDSELCFREGALDADPADLPPDVDAPAVTRSSTAAAANAIFFEPGDFAPLEVWAAALRDTE------GAAASYASVRGARPLVIIADARPANADMRETLIELNRRFPRAAADLVAITPDTPAQNRRVAKKSNLFFPLLSDESREWLRAYLVTARVPWEKMVFVLEPRYGRFTAVVRDVDSLSVVEQVKE 285
[Close]
BLAST of mRNA_F-serratus_M_contig70.18195.1 vs. uniprot
Match: A0A7S2V3J8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3J8_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.750e-23
Identity = 56/149 (37.58%), Postives = 88/149 (59.06%), Query Frame = 2 
Query:  938 FSTGDFAPLDPWRLLADSEELPRGGSSQVNFGLFQGE-KPLLVVVDPIPGSGEMRQAMYELNTRMPRKLVHVVAVTADSPGSNRKAAKKSRLSFPVLSDQSGE-WMLAYRVTIGGQREKMAFLIEPELGRIVNVWSNFDALSLVDLVKD 1378
             + GD APLD W  L D +         V F  F+ + KP++V+VDP   SG+++ A+ E+N+R P     +VA++ D P  NRK +KKS   FP+L+D   + WM  Y V      EK+ F+IEP+LG+++ V  + D+ ++V+ +KD
Sbjct:  140 LAAGDLAPLDVWNQLKDVK------GDSVTFSEFKADGKPIVVIVDPRRASGDLKSALLEINSRFPETSAKIVAISCDKPSDNRKLSKKSMFFFPLLADTPEKTWMDTYGVLNNKSLEKVIFIIEPKLGKVLTVLRDIDSTAVVETIKD 282
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig70.18195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JB15_9PHAE7.170e-14262.99AhpC-TSA domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YU18_9STRA2.730e-2933.77AhpC-TSA domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2V3J8_9STRA2.750e-2337.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig70contigF-serratus_M_contig70:662505..672382 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-17_002350.1
Exons9
Model size2669
Cds size1359
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932154.675096-UTR-F-serratus_M_contig70:662504..6637711622932154.675096-UTR-F-serratus_M_contig70:662504..663771Fucus serratus maleUTRF-serratus_M_contig70 662505..663771 -
1690964173.6770499-UTR-F-serratus_M_contig70:662504..6637711690964173.6770499-UTR-F-serratus_M_contig70:662504..663771Fucus serratus maleUTRF-serratus_M_contig70 662505..663771 -
1622932154.9061673-UTR-F-serratus_M_contig70:672339..6723821622932154.9061673-UTR-F-serratus_M_contig70:672339..672382Fucus serratus maleUTRF-serratus_M_contig70 672340..672382 -
1690964173.8220062-UTR-F-serratus_M_contig70:672339..6723821690964173.8220062-UTR-F-serratus_M_contig70:672339..672382Fucus serratus maleUTRF-serratus_M_contig70 672340..672382 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932154.6939003-CDS-F-serratus_M_contig70:663771..6638521622932154.6939003-CDS-F-serratus_M_contig70:663771..663852Fucus serratus maleCDSF-serratus_M_contig70 663772..663852 -
1690964173.6999605-CDS-F-serratus_M_contig70:663771..6638521690964173.6999605-CDS-F-serratus_M_contig70:663771..663852Fucus serratus maleCDSF-serratus_M_contig70 663772..663852 -
1622932154.7156363-CDS-F-serratus_M_contig70:664723..6649061622932154.7156363-CDS-F-serratus_M_contig70:664723..664906Fucus serratus maleCDSF-serratus_M_contig70 664724..664906 -
1690964173.7174017-CDS-F-serratus_M_contig70:664723..6649061690964173.7174017-CDS-F-serratus_M_contig70:664723..664906Fucus serratus maleCDSF-serratus_M_contig70 664724..664906 -
1622932154.7393126-CDS-F-serratus_M_contig70:665444..6655871622932154.7393126-CDS-F-serratus_M_contig70:665444..665587Fucus serratus maleCDSF-serratus_M_contig70 665445..665587 -
1690964173.7304416-CDS-F-serratus_M_contig70:665444..6655871690964173.7304416-CDS-F-serratus_M_contig70:665444..665587Fucus serratus maleCDSF-serratus_M_contig70 665445..665587 -
1622932154.7686803-CDS-F-serratus_M_contig70:665799..6658691622932154.7686803-CDS-F-serratus_M_contig70:665799..665869Fucus serratus maleCDSF-serratus_M_contig70 665800..665869 -
1690964173.747343-CDS-F-serratus_M_contig70:665799..6658691690964173.747343-CDS-F-serratus_M_contig70:665799..665869Fucus serratus maleCDSF-serratus_M_contig70 665800..665869 -
1622932154.790278-CDS-F-serratus_M_contig70:666272..6663831622932154.790278-CDS-F-serratus_M_contig70:666272..666383Fucus serratus maleCDSF-serratus_M_contig70 666273..666383 -
1690964173.7625353-CDS-F-serratus_M_contig70:666272..6663831690964173.7625353-CDS-F-serratus_M_contig70:666272..666383Fucus serratus maleCDSF-serratus_M_contig70 666273..666383 -
1622932154.81512-CDS-F-serratus_M_contig70:666941..6670781622932154.81512-CDS-F-serratus_M_contig70:666941..667078Fucus serratus maleCDSF-serratus_M_contig70 666942..667078 -
1690964173.7770152-CDS-F-serratus_M_contig70:666941..6670781690964173.7770152-CDS-F-serratus_M_contig70:666941..667078Fucus serratus maleCDSF-serratus_M_contig70 666942..667078 -
1622932154.8386037-CDS-F-serratus_M_contig70:667848..6681401622932154.8386037-CDS-F-serratus_M_contig70:667848..668140Fucus serratus maleCDSF-serratus_M_contig70 667849..668140 -
1690964173.7888412-CDS-F-serratus_M_contig70:667848..6681401690964173.7888412-CDS-F-serratus_M_contig70:667848..668140Fucus serratus maleCDSF-serratus_M_contig70 667849..668140 -
1622932154.8646753-CDS-F-serratus_M_contig70:668269..6684231622932154.8646753-CDS-F-serratus_M_contig70:668269..668423Fucus serratus maleCDSF-serratus_M_contig70 668270..668423 -
1690964173.8019454-CDS-F-serratus_M_contig70:668269..6684231690964173.8019454-CDS-F-serratus_M_contig70:668269..668423Fucus serratus maleCDSF-serratus_M_contig70 668270..668423 -
1622932154.8863451-CDS-F-serratus_M_contig70:672151..6723391622932154.8863451-CDS-F-serratus_M_contig70:672151..672339Fucus serratus maleCDSF-serratus_M_contig70 672152..672339 -
1690964173.8122683-CDS-F-serratus_M_contig70:672151..6723391690964173.8122683-CDS-F-serratus_M_contig70:672151..672339Fucus serratus maleCDSF-serratus_M_contig70 672152..672339 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig70.18195.1prot_F-serratus_M_contig70.18195.1Fucus serratus malepolypeptideF-serratus_M_contig70 663772..672339 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig70.18195.1

>prot_F-serratus_M_contig70.18195.1 ID=prot_F-serratus_M_contig70.18195.1|Name=mRNA_F-serratus_M_contig70.18195.1|organism=Fucus serratus male|type=polypeptide|length=453bp
MRIIELLVLTSLTGWVGAYVAPIPPSRSPGATAGDHIQKASSGGPGGSVA
PPSHARRCRPLFRKGFSKGGMGKQGELMEQMAKAKRDRLKKELEDKLRES
GDLPPDLEGDTGKKPAVASGGARMKPERSWREAGAAKAAAAPSSAASASP
KKGTPAETGAGGQVAATAFKAAGTAAGSGKVWPSTQPEGRSGDAYDLYDD
LLEGTGSGDGKESQFSPELENPNASYEEYGAMRDKAQWDAVVSGKASVAN
RSPLASESEYNDFEAMLTGVVRVTPENLGPKAAEKKLIKRAEQQLPQAFS
TGDFAPLDPWRLLADSEELPRGGSSQVNFGLFQGEKPLLVVVDPIPGSGE
MRQAMYELNTRMPRKLVHVVAVTADSPGSNRKAAKKSRLSFPVLSDQSGE
WMLAYRVTIGGQREKMAFLIEPELGRIVNVWSNFDALSLVDLVKDYISSN
RL*
back to top

mRNA from alignment at F-serratus_M_contig70:662505..672382-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig70.18195.1 ID=mRNA_F-serratus_M_contig70.18195.1|Name=mRNA_F-serratus_M_contig70.18195.1|organism=Fucus serratus male|type=mRNA|length=9878bp|location=Sequence derived from alignment at F-serratus_M_contig70:662505..672382- (Fucus serratus male)
GGCTGATCCTGCACGTAGTTTATGCCTTTCCCGGCTGTTGCCTATGCGTA
TTATTGAATTACTGGTGCTAACGAGCTTGACGGGATGGGTGGGCGCGTAC
GTTGCCCCCATCCCGCCGTCACGTTCTCCGGGTGCAACAGCAGGCGATCA
TATTCAGAAGGCATCATCAGGCGGCCCCGGTGGCTCCGTTGCCCCCCCAT
CACATGCTCGCCGCTGCCGCCCTCTTTTCAGGTTGGTGTGGCCAAGGTAG
TAAGCCATATAAATACCCGTGTTGTTGGTGTTTCACGACTTGAATGTGGC
AAGGTGGATCATGTGAGGCAAGATGCAAAGAGCAAAAGAGGATGAACTCC
TGACATGTCTTGAACTGCAACACAGGCAGTAAAATATAAAATATTACGAA
AATTACAGAGAAAAAGTACAAATATAATACAGCTCCTTTCCTGAGGGACA
AAGGAAAATTCAGAAGACTGGATACTCAACAAGAATTTTCCACTTTGACG
GGGGGATGCTCCGGAGGTCTAGACGCGTTCAGATTTTTCTTTAAAAACTC
TGTCTCTACAGATTATGGAACTGTCGCATGATCTCTGGATATTATCGGCA
CTTCAGCGCGCTTCATTTATGGAGCACATCGACATATTTTCCGGGGGTAA
ACCTTTCACAGAGACATCCAACCAACCAAGTGCGAGTGGCTGTTGGGTAG
AAACCACCTCGAGGATACTCGTATAATAGTCATTCATGACGTACACGGAA
ATCTGTTGCTGCTCTGTTACGCCTCCCAGCTTTCAGAGACAAGTCAAATC
TGATCCAAGTGCGAGAGTGGTTGCTGTTGGACGAAAACCACCTCGAAAAT
CTTCAACCTATAATAGATCCAGCCCGTGGTTACAAGGTAGTAGAAAACAC
CGTCCGGTAGGGGAAAACGTACGACGTACTCTCCAAAGTTGTTTGTTTTT
ATATGAGCCTCAACGTGCTAGGTTACAAATCCCACCTACTACGGCAACGT
TGCCATCATCCTGCCTGTGGACACTAAATAATCTTCCCATTTGTCCCCGG
TTCTCGCCTTTAATTTATCGCGATGCAAGTTCAGTACTCCTCTTACAACT
CGCCAACCAATGGTTGAATTTTACCTACTCACGTGTTCTCGCTCGTTCCA
CTGCGGACGCTCAGAATAAAAATCCTGCTTCGACAAGGATCGAACTCACG
AATCCCTCACCAGCAGGTGTGCGAGGTTACCCACTATTAGACCACTCGGG
CGAGAATGTAAAAAAAAAGAAAAGAAAAGAAAAGTAACTTTCCTCCTCGC
AGCTGTAGTACCACAGGCAACTATTAATAATAAAGTACTATAATACAATA
GCTACAGTACCGCAGTGTGTGTTTTCTTCCCATCCATTCTGGACATCAAG
TTCGTTGGACGTACCAGCCGGGGTCACACAGGAGGAAGGTCACACAGGAT
TTTTCATCCACCTTCCTTCTGCGGTGCGTGCCTTGATTTTTGTCGCGAGA
AGGATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAGTCGAATTTTGTGT
ACTACTAACGAATTAATCGTTCTCCACCCGTTGGGCATTTTTATTTTGTT
TTTTTTAGTTTTAAGTGAGAAAAATCCCGTTTGCCGGGATCGAACTCACG
TCCCAACGTGTCAGAAGGTTACGAGGTGCCTACTGAGCTACTAGTCAACG
TTAATCGGGCATGCGCAGATTAACTACAAAACTACTAGACTATTATAGCT
CTCCGAGGTCCTGTTCTTCACCGCTAGGGTCATTGTTCGTATACGTAAGC
GTGGAGCCTAGTCCCGACGTGCGAACTCTGACGCGCAACCCTGAGTGTGC
ATAATGAGCAGGCTGAAGCGGGACGGGACAGCCGAACCCGTCTCGCGAGA
CCAAATTCTCAGGCGCGAACGGGGACAGACAGGAAAATATTAATTCTCCC
CGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTCGATCCATA
TACTCTGCTATAAGTAACACCGTAAACATACATACCATACATATACCGAA
GTATCATTTAATATACCAGGTTCAGCCTGAGCGTAAAGAATGAGCAGGCT
GATGCGCGCGAGACCAAATTCTCAGGCGCGAACGGGAACAGGGGAAAGCG
AAAATAACTAACACGAACAGGGTTGACAACCTCGCCCGGTTGATCCGTGC
TCCGCTATATGTCATGAACATACTTACATACATACCAGGCACAAGACTGT
CAGGTAATCTTTGATACGTACTTGTACATTTATTAAGTGATCCAAGGGAT
TACCAGGAAAAGGCAGCAAGCACTTTCACCCGTTGCTACAGTACTGCAGC
TACCTTGATACAGCAGTAGATTGATTTGATTGATGATTGATGGATTGATG
GATTGATGGATTGAATTTTCACACGAGCTCTGCTCTGTCGAACTCCAGTC
CGTTGTCACACTATTAATAGGTAGAAAAACATCCCCCGGGAGGGGAAAAC
GCACAACGCACTCGCTATAGGTATACACCATTGGTCCACTCCATACAGTA
CTTGATACCTATACCTATACCATCATTACTGAGTGTTGGAAAAGAGAGGC
GCATAAAAACTGGTCCGTGGCAAAAGCACGAAAATACAGTACTGTACCCG
TTACTGGGTGTATGATAATATACAGTAATAATAGTGCATCGACCCTTAAA
TAATACATAATACCTGGTATATTTGATTTAAGAACTACTGGTCCTGTGCC
GGCGGACTCTCGGTAGTAGACGCCATCGGGTTTTTTTTGCGTGACTCGAT
TAACTCGGGACTGCCCCGATGGAGGTTGGCGGTATATGTGGACGCCGTCG
TGGAAAGCGGGAGTAATCCCGCGAGCAAGCACCAGATTCGGCCTTAGTGT
GGAAAATAAGTAGGCCGACGCGGGACGGGACGGCCGAACCCGTCTCGCGA
GACCAAATTCTCAGGCGCGAACGGGGACAGGGAACAACTCATTCCTTGTA
CCGCTAACCACGAGTATAGCAGGATTGGCAACCATACCCGGTTGGTTCAT
ACTATCACTCTGCTGAAAGTGCTAACCTTATAGTCTAGAGCTACTCATAC
ATGCAAAAAAAAGGAAACGCAATGGTAAATAATATTTTCGGGAAAAAGCG
ACACCTCCAAAGACATGGAACAAAAAATACACACGCAGTTTTTAGCTAAC
TGTGTGGGCAGTGCGGCTGCTGGGGCGCATTGCATGCATATCGAAGATTG
ACTGGACGAAGGGTCGCGGATTCAATGAAAACAAAAAAAGACGAAAACGA
AACAAAAGCAAAAACAAAGCAAAAACAAAGCAAAAACAAAGCAAAATAAA
ACGTAATGCTAGAGAAAGAAGTATGGCGTCGGTCCAGAGGATACAAGTTA
ACTCCAGTTGGGGCTAAGCAACCGTGGCGAGCGAATCAGCACGAACATGC
TTGCTTTGGGCTACCGCCTCCTTGGTCCTTCCCATCACGTTCGGGCATAT
ACTACTGTATGCCGTAGTCGAACCCTTGCTTTCTCTGCAGCGATCCATTT
CGCCATAAAACGTTCCGCTCTTGTTCTACGGTCTTGCGCCGTTCCCCCTC
GTCCTTCACTACAGCCGTCCACTGGTTGTCCTTGATACCGAAAGCTCTGA
GGTTGTCCAGGAGATATCCCACCCACTCTTTTCCCTGCCCCCCATGGATG
CACCGATGCTGCTGCTGTAAGGGGCACGGTGGGTTCTGCACAAAGCAGCA
GCTTCGGCTTCATGTACTCCGTCTTATGACGGCGAGTAGCGGCGTGAGGA
GTGGCAGTCCACTGGAATGCCGCGCGTACTTGCGGGGGATAAAATATGGT
GTTCATCCCTCTCCCTCGAGCTTTTTCAGCAGAGACAAGGGTTGACTGAA
ACCCTCTTCAACCTCCGTGCTCGAACGTGTTCCGAAACGCTTCGCACGCA
CACCTCCAGGAAGGGGTTCTCCAAAGGGGGAATGGGGAAGCAAGGCGAAC
TCATGGAGCAAATGGCGAAGGCAAAGAGGGACAGACTCAAGAAGGAGCTA
GAGGATAAGCTCAGGGAGAGCGGAGACTTGCCGCCGGACCTCGAGGGAGA
CACGGGGAAGAAGGTCTGGCGGAAACTTACGGTTCTTCTTTCCTGCCCCC
TGTCTTACTACGCCTCCCCCCTCCTTATGAACACCCGCTTATGTTGCCCC
TCCCCCCCTCCTCGTGTTTTGATTTCTCTCTCACACACACAGCCCGCCGT
GGCTTCGGGAGGGGCGAGAATGAAGCCCGAGAGATCTTGGAGGGAAGCCG
GAGCGGCAAAGGCAGCAGCCGCACCATCGTCGGCGGCCTCAGCTTCGCCG
AAAAAAGGAACTCCGGCAGAAACAGGGGCGGGGGGCCAGGTAGCTGCCAC
GGCTTTCAAAGCGGCGGGGACGGCAGCCGGGAGCGGTAAGGTCTGGCCGA
GTACTCAGCCTGAGGGAAGATCTGGAGATGCGTACGACTTGTACGATGAC
CTGCTGGAGGGCACCGGCTCGGGAGATGGCAAGGGTAAGGAGGGAGGGCG
TGGCGAGTAAAACTGATCTGCTGTCGGAGGCAGTCGTCGGCCGAACAGCG
TGCGATAAGTTGTTTTCTTTGGGGGGGGGCGGGGGGGGGATATTTTGAAC
AATCTTCAGTCTCGGCGTTAGACGAACTTCTGGAGATCAAGACGTGGTTT
AAGACAATCGCGTGGTTTTTGCGAGGGACGAGCGGACGATAGTGCAGACC
TGTAAGGCGTTACATTAAGCGCCTCACCCATAGGGAGGAATGTCGCGCAT
ACACTGTTGATGAGGCGTGTGTTGCACACCACCCGGGGATATACGATGTT
TGTCCCCCCCCAATCTCATCGTTAACAACGTTACCGCAGTGAGCAAGTTT
TTTGTTTTCTGTTTTGTCTCTTCCTTTCTTTTGATTTATTATCATTCATC
TATCTTTGCGAAGCGTACATTGTGTGGCAAATATGGCAAATATGTCGCGC
CTAGAGATATTTTCCGAAATAATAACATAATATAAATTCACGATATTTTT
GCCTGCCTTGTGTTATCGACAGAAATGGGATGGTAGGTTTCGTACCCTGT
ACGTTGTATCCACCACCATTACCTGCGGGGATCGCATCGCATCGCCGACC
CCAATATCGTAGCGTACATGTGCTGCTGCCCCCCCCTTCCCCCCCCGACC
AAGCCCGTCTCGATCGCGCGTTAAATCCAGACTGTAAAACCCCACATGCG
TTGTAACGTACCCTAACCTCGTACCGTTCCCGTGTTCTCCCTGCCCCAAA
CCAGAGTCGCAATTTTCACCAGAATTAGAAAACCCAAATGCGTCGTACGA
GGAGTACGGCGCGATGAGGGACAAAGCGCAGTGGGACGCCGTCGTTTCAG
GAAAGGCATCTGTCGCCAACCGTTCTCCCCTTGCATCAGAGGTGACCCTA
TCCTCTCCTCTATTTTTCACTTGTTCTTCTTGTTTCAATCTCAAGGGGTG
GTCGTGGTCGTGGTCGTGGTCGTAAAATAAACTCTTTGTGGTTTTTGCGT
GTCTTCGTGTTGCTCGCAAATGTTTGTGGGTCTTGACGGAAATTGAGTGG
CGGTGACTTAAATGACAAGTTGGAGCTTCTTCGATGGAAAGCCGGTTTCT
CATGTTTTTCGTTTGTTTGTTTTTTCTCGTGTGTTCGGGTGCCGCAGCCC
ATTTCCATGGGAAACGTTCTCCTTTCCTCGTTCTCTTCTGATGATAAGAA
TGCTGTACCGCCTTCGGTGGCAAACGCACAGCACAGGCAAGCCGCGAATG
CTTACTTGTTGCGGTTCACATACAGAAAATACTGGCCACAAACACCCCAC
GATTAGCGCAAGTCAACCAGTCATTCGCTGTCATTCCCCGTCTCTCCTAC
CATCTGAAAAACCCCCTTCCCCCGCCCCCCCCCCCCTACCGCCGCCTCGC
CCTCGTCTCCCACCTCCCCTTTACCTTTATATTTCCTTTTGTGTCGAAGA
GCGAATACAATGACTTCGAGGCGATGCTGACTGGGGTCGTGCGCGTGACA
CCGGAGAACCTGGGGCCGAAGGCGGCCGAGAAAAAACTCATCAAACGCGC
GGAACAGCAGGTCGGCCGTCCGAACTCTCGGAGCGGAGGCGAGGAGGGGG
CGGGGCCTCGTCCTCTTGATGACCCGCCTCTACCCCTCCCCCACCCGCTT
CCCACCCCCCCATTGCTAAGACCGAGAAAAAACGTGCCGGAATCAGACAG
CGCGCGCGAAATAATCCCGTTGCCAGAAATGACGGCACCTCTTCAGTTGC
ACGAGTTGGGACGGTGCGGGATAGAGATGACGTTGATATGGTACATTTAT
TTGCCTTGGATGTGTAGATGGTGAAGCCGTGGAACCCTCCAGCGAACCAC
GTTTGTTTTAGGGATGATGGTTTTTGCAGGCTTCGCAATTACACACCCCA
GATAACCCCCGCCCTCCCCCCATCCCGATCCTCCAACCTCCGCCCCTCGC
CTCCGGGGAGCAGTTGCCTCAAGCATTTTCGACGGGAGATTTCGCGCCCC
TTGATCCCTGGCGTCTGCTGGCGGACAGCGAGGGTAGCAAGGCGAGACCG
AAGTTCATTTCACAGTCTTAGCCCGATCGACGAGCAGATGGAGTTTACGA
GCTGTGTTGGCAGGGTGAACTCGTGGTTAGGAGGGGTTCCCGTTCCACAC
TTTTGGGATGGAAAAAAAACGTAGAAGAGAGATAGGGAGAGGGTTGAGCT
TGAACGGGCGGCGTCTGAGTGTTCTTCCTCGGCGTTAGAAACCAGAGTTG
CCGCGCGGGGGTTCATCGCAGGTAAACTTTGGGCTCTTCCAAGGCGAGAA
ACCGCTGCTAGTGGTGGTCGATCCAATCCCGGGGAGCGGCGAGATGCGAC
AGGCCATGTATGAGCTCAACACGCGCATGCCTCGAAAGGTAAGAAATGGG
CTGTAAGTACCCCCCCCCCCCCATGCTCCCTTTTCTCCTACCCGAGTTCT
AATCCGTTTTAGGGAGCTTGGTAATCGCACCCAATCAAAACGTCTCGATT
GGATATGTGCGTCAGTGTTGGCGTTTCGTTTCAGCCCTGCCCTGCCTCGC
TCCGCCCCTCCCTTGGGACCACACGCGTAACTCGCCTGACCTCCACCAAA
CCCTTTCGCACTTTCGCGATGAACTCTGGACATCATTTTCTTCTCGTCCC
TACGGTATTCCGCCATCCATCCTCTGGAAAACCTTTGGATGTCCTCCTTT
GCGTCGCTGTTTTCGGTGACGTTCCCTATCAAATTATGCAACACCCTCGA
CGTCGCTGCGCTGTGTGATTAACTTTGCTATGGACGAAAAACTTGCCTCG
GGGTGAACGTGGGTACCATGGTGATACGTGCTTGATACGGAACCTCGGGG
GTGGGGGGGGGGGGGGGCGATGCGATCACGCGCGCATCGAAAAACGCACC
CATCCCCGCGTATATAACGTGACCAGCTGGTCCATGTGGTGGCGGTAACC
GCCGACTCTCCCGGAAGCAACCGTAAGGCAGCCAAGAAGAGTCGGCTGTC
GTTCCCTGTCCTGAGCGACCAGAGCGGCGAGTGGATGCTGGCGTACCGAG
TTACGATCGGGGGACAGCGGGAGAAGATGGCTTTTCTGATCGAGCCAGAG
CTAGGAAGGGTAAGTTTGTGCTGCTGCAGAAGTACGATAGCAGCACCAGC
AGCTCAAGGATAAACCATGCTGTCGCAGCATAAGCAGTATATAAGAGCTG
CATGTACTGCTGTATAGTATTAAACGCGATGCGCGTTGGGAGGATGAAGT
AATCGACTTTTATTGAAGGTTTATGTTTTGGTTGTTCAGACGCCAGTCTG
TCCGTGTCATCCGTCCGAAAGATCGACGGGTGAGTTAGTATGTAGAGCGT
AATATATATATAATATATAGTACCGGAGCACTCAACGGTGTGGAGGATCT
TCCCGAGTTTTTTTTTACTGCTGACCAAGTAAGTGGCGAATGCCTTCGCG
GTGCACTTCTTTCGCCCTTGCCAAGATCTTCGCAACGTTCTGTTGGGTAC
CTGTACATGGTGCCTGCCCTCGCTAGAAAACTGCAGGAGGTCGTAGTGGT
TGGCGGAGGTTCACGTCCGGAGTGTGTTGTACATCGTCGTCGTCAGTAGT
CACATGTCCAGGTCGTGCTTCTTGAGTAGTTACGTCTGATCGCGAAAATG
ATTTGAACCTTAAGCCTCCTTTCATCTCGGGCTACGAGGGAGAAATAATC
AAGGCGCGTTCGACGGTAACGTGGAGGTCGAACTTTCTAACTACTACTGC
ATAGACTACTACAGTTTGATGCCTACTAGGGTCAAACGTTCCACATAAGT
TTTGCAGCACAGCAAGCATTCGATTCGCGCGCTTTGACGGTAACGTGAAA
GTCGAGCTAAGGAACTGCCGCTAGTTGGTGTCTTCTAGGGTAAAAAGTTC
CATTTTTTCCCCATTTTTTCCCCTTCGCTTGGACTCCGCTCATCCTTGAT
CCTCACTGATCTCTTCCCCCCCCCCATCAGATTGTGAATGTCTGGTCGAA
CTTCGACGCCCTATCGCTGGTGGATTTGGTCAAGGACTACATATCGTCCA
ACCGGTTATGAATGCGCCTAAGCTTGCCGGGGAGACTTGTTCTGTGGCCG
AGTGACGGAGCGAGCCCGCGGATCAATGGGTTGGGTGGACCTGATTTAAT
CAAGTACGATACGGACCAATTCATCGCGTCTGCGTGGCAAGAAAAGTCAA
TGATCTGTTTGTCGTGTATTTCAGCAAATACAATCTTAGGCGATTTAACT
GTGGTACAACTTGTTTTGTGAGAGTGCGCGGCACCAAGGCCATACTATAC
AGATTATACTTTTTTGCTGTAGATGGTGAATGTGCGTGCGCTTGATGTTT
GTAAAAATATAATATTAATAACACTCATTCCTTTTTGTTTGTTTAAGATC
TGAAGGTGTGGTACATACGGCTTGTTTGAAACCCCTATGGTCCTGGGAAT
AATCCGTTTCGGTCGCGTAGGGGCCGTGACCCACTAACCAGCTCCGCAGA
AAGATATTGTATTATACGAAATAACAGCTGTGCCATACAACAGTCCGCGA
GGGTGTCTCTTTCTTGCTTCTGCCAAACCCTTTACGTCCTGCCTTTGTTG
TTTATTATACTGAAGTATTTATGTTTATGCTGAAGTATTTATGTCTTGGA
TTTGCGAGAGCAAACGCGGCGTGGCTAGCTGTGTCTCTTTTCGGCGTCGA
CCTCTCTCTTGTCGTTTGGAAGCCTCAGAATGACAAAAAACATATCAGTC
AGTTCCAGATGGCATTCTTGAGCAGTTGCAGAATATGTTTTACCAAATAG
GCGCCACCCAACATGCCCTCTCCAAAATAATTTGGAATATTGTTACTTCC
CAACATTTTTGTATCCACTGTTTTACATCTCAAGAAGTGGTCCTTGTTCA
GGCGTGTCGTAAGATTGAAATCATGTGATAGTCAAGAGAAGTATTATAGA
GAAGCTCTTGTATCGGGGCAACCATACGAGGTATACTGTATAGCATATAG
TATTAGGTGTCTTTGCAGCTTGTGGAGTGGTCGTCTGTTATCATCCTTGA
ACCGATCGTGATGATTCGACAGCTGTAGGCTTTCAAGGAAGCCCCTCTCA
GATGGGGCCGGCAGTCCCTACCCTGAAAGTGATCGTGATCGGAGTCCTGG
TTGTCTGCTGGGTCCGTTGGGGCCGGTATTAACCTTCTATAACTCTTAGG
AGCACGCGCCTGCGTACAGGAAGCAGTGATGATGGACGAGGTATTGAGTC
GGACTAGCATCAAATGCAGTGAGATGGACTACCCACAACTTTGTTGAGTT
CGGCGAACTGTAATATCGTGACGAGCGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig70:662505..672382-

>mRNA_F-serratus_M_contig70.18195.1 ID=mRNA_F-serratus_M_contig70.18195.1|Name=mRNA_F-serratus_M_contig70.18195.1|organism=Fucus serratus male|type=CDS|length=2718bp|location=Sequence derived from alignment at F-serratus_M_contig70:662505..672382- (Fucus serratus male)
ATGCGTATTATTGAATTACTGGTGCTAACGAGCTTGACGGGATGGGTGGG
CGCGTACGTTGCCCCCATCCCGCCGTCACGTTCTCCGGGTGCAACAGCAG
GCGATCATATTCAGAAGGCATCATCAGGCGGCCCCGGTGGCTCCGTTGCC
CCCCCATCACATGCTCGCCGCTGCCGCCCTCTTTTCAGATGCGTATTATT
GAATTACTGGTGCTAACGAGCTTGACGGGATGGGTGGGCGCGTACGTTGC
CCCCATCCCGCCGTCACGTTCTCCGGGTGCAACAGCAGGCGATCATATTC
AGAAGGCATCATCAGGCGGCCCCGGTGGCTCCGTTGCCCCCCCATCACAT
GCTCGCCGCTGCCGCCCTCTTTTCAGGAAGGGGTTCTCCAAAGGGGGAAT
GGGGAAGCAAGGCGAACTCATGGAGCAAATGGCGAAGGCAAAGAGGGACA
GACTCAAGAAGGAGCTAGAGGATAAGCTCAGGGAGAGCGGAGACTTGCCG
CCGGACCTCGAGGGAGACACGGGGAAGAAGGAAGGGGTTCTCCAAAGGGG
GAATGGGGAAGCAAGGCGAACTCATGGAGCAAATGGCGAAGGCAAAGAGG
GACAGACTCAAGAAGGAGCTAGAGGATAAGCTCAGGGAGAGCGGAGACTT
GCCGCCGGACCTCGAGGGAGACACGGGGAAGAAGCCCGCCGTGGCTTCGG
GAGGGGCGAGAATGAAGCCCGAGAGATCTTGGAGGGAAGCCGGAGCGGCA
AAGGCAGCAGCCGCACCATCGTCGGCGGCCTCAGCTTCGCCGAAAAAAGG
AACTCCGGCAGAAACAGGGGCGGGGGGCCAGGTAGCTGCCACGGCTTTCA
AAGCGGCGGGGACGGCAGCCGGGAGCGGTAAGGTCTGGCCGAGTACTCAG
CCTGAGGGAAGATCTGGAGATGCGTACGACTTGTACGATGACCTGCTGGA
GGGCACCGGCTCGGGAGATGGCAAGGCCCGCCGTGGCTTCGGGAGGGGCG
AGAATGAAGCCCGAGAGATCTTGGAGGGAAGCCGGAGCGGCAAAGGCAGC
AGCCGCACCATCGTCGGCGGCCTCAGCTTCGCCGAAAAAAGGAACTCCGG
CAGAAACAGGGGCGGGGGGCCAGGTAGCTGCCACGGCTTTCAAAGCGGCG
GGGACGGCAGCCGGGAGCGGTAAGGTCTGGCCGAGTACTCAGCCTGAGGG
AAGATCTGGAGATGCGTACGACTTGTACGATGACCTGCTGGAGGGCACCG
GCTCGGGAGATGGCAAGGAGTCGCAATTTTCACCAGAATTAGAAAACCCA
AATGCGTCGTACGAGGAGTACGGCGCGATGAGGGACAAAGCGCAGTGGGA
CGCCGTCGTTTCAGGAAAGGCATCTGTCGCCAACCGTTCTCCCCTTGCAT
CAGAGAGTCGCAATTTTCACCAGAATTAGAAAACCCAAATGCGTCGTACG
AGGAGTACGGCGCGATGAGGGACAAAGCGCAGTGGGACGCCGTCGTTTCA
GGAAAGGCATCTGTCGCCAACCGTTCTCCCCTTGCATCAGAGAGCGAATA
CAATGACTTCGAGGCGATGCTGACTGGGGTCGTGCGCGTGACACCGGAGA
ACCTGGGGCCGAAGGCGGCCGAGAAAAAACTCATCAAACGCGCGGAACAG
CAGAGCGAATACAATGACTTCGAGGCGATGCTGACTGGGGTCGTGCGCGT
GACACCGGAGAACCTGGGGCCGAAGGCGGCCGAGAAAAAACTCATCAAAC
GCGCGGAACAGCAGTTGCCTCAAGCATTTTCGACGGGAGATTTCGCGCCC
CTTGATCCCTGGCGTCTGCTGGCGGACAGCGAGGTTGCCTCAAGCATTTT
CGACGGGAGATTTCGCGCCCCTTGATCCCTGGCGTCTGCTGGCGGACAGC
GAGGAGTTGCCGCGCGGGGGTTCATCGCAGGTAAACTTTGGGCTCTTCCA
AGGCGAGAAACCGCTGCTAGTGGTGGTCGATCCAATCCCGGGGAGCGGCG
AGATGCGACAGGCCATGTATGAGCTCAACACGCGCATGCCTCGAAAGAGT
TGCCGCGCGGGGGTTCATCGCAGGTAAACTTTGGGCTCTTCCAAGGCGAG
AAACCGCTGCTAGTGGTGGTCGATCCAATCCCGGGGAGCGGCGAGATGCG
ACAGGCCATGTATGAGCTCAACACGCGCATGCCTCGAAAGCTGGTCCATG
TGGTGGCGGTAACCGCCGACTCTCCCGGAAGCAACCGTAAGGCAGCCAAG
AAGAGTCGGCTGTCGTTCCCTGTCCTGAGCGACCAGAGCGGCGAGTGGAT
GCTGGCGTACCGAGTTACGATCGGGGGACAGCGGGAGAAGATGGCTTTTC
TGATCGAGCCAGAGCTAGGAAGGCTGGTCCATGTGGTGGCGGTAACCGCC
GACTCTCCCGGAAGCAACCGTAAGGCAGCCAAGAAGAGTCGGCTGTCGTT
CCCTGTCCTGAGCGACCAGAGCGGCGAGTGGATGCTGGCGTACCGAGTTA
CGATCGGGGGACAGCGGGAGAAGATGGCTTTTCTGATCGAGCCAGAGCTA
GGAAGGATTGTGAATGTCTGGTCGAACTTCGACGCCCTATCGCTGGTGGA
TTTGGTCAAGGACTACATATCGTCCAACCGGTTATGAATTGTGAATGTCT
GGTCGAACTTCGACGCCCTATCGCTGGTGGATTTGGTCAAGGACTACATA
TCGTCCAACCGGTTATGA
back to top