mRNA_F-serratus_M_contig70.18185.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 356 bits (914), Expect = 1.180e-111 Identity = 210/438 (47.95%), Postives = 280/438 (63.93%), Query Frame = 2
Query: 278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSREN---VTSLWSPPSAMAP----RGSQLSSSRGSVCKRIGRRRRTDHRVRGTPRRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNI----APKRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANKAAEEAKAEKA 1558
L +A R+ V R+ L ETVR L D RKTPW+ K PGK W+ FL+RHPRV TRIY NR+T+ EP I FY W ++ P+ADH+HNTDET TT KT KA+ +AGQKVV S+R+NSREN VT++ + S AP +G +L ++ G D R T ++ VF+ YL DFH+Q +RGL+DGKP++L+LDGHASHV +VI+L +EL+IVLFQLPSHTSHITQPL++ A KR +K + + G P +F+ +N++SFAGAGLWP +M+RAM L+GT KR T RP L DVPIA +QLE+D+G+R +R+L+A GH G RV TVMLG ++RQRKRAKK+ T+R + G+PDGG +T+++ L AE+ERA+K +AKAE+A
Sbjct: 70 LLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPD--WFAEKNGP---PDARYTCTDSSFMQG--NVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKRAKKMATSRGSLGLPDGGNITAEDFLAKVAEKERADKEESDAKAERA 499
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI) HSP 1 Score: 350 bits (897), Expect = 8.960e-109 Identity = 219/483 (45.34%), Postives = 294/483 (60.87%), Query Frame = 2
Query: 278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSRENVT---SLWSPPSAMAP----RGSQLSSSRGSVCKRIGRRRRTDHRVRGTPRRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRCR*SAT*PA*S---GGLGE---RSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANKAAEEAKAEKAXXREQKRADKETASLAWQASRRGRGEASGVRLGCERIEG 1675
L +AARHF + R L+E VRQL +DGR PW+A PG++W+ F KRHP +S RIY NRI ++E ++ FY+ +GE+V E ADHL NTDET +T+ TKT KA AE+GQKVVG+MRSNSRE VT ++ + + +AP +G +L + GR + R+ T ++ TVFVNY+ DFH+Q +RGL++G P+VLVLDGHASHV Y+VIKL +L+IVL+Q+PSH+SH+ QPL++ KR +K + GR PA S G LG+ RSFS QN +SFAGAGLWP D +RAM LQG GKRK R RP + D+ +A S K L ++LG R +R L+ G ++G + TVMLG ++ +K+ KKL TR + G+P+GG +T +++ Y E ER AEEA EK RE KRA +E ASL A+R GRG EG
Sbjct: 71 LLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKAIAESGQKVVGAMRSNSRETVTVVVTISAAGATLAPWIIYKGQRLQADWVK-----GRNGPPNARLAVTDSSFMQG--TVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVIKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRV------PAKSDMLGILGDAWLRSFSEQQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKNLADNLGPRTVRELQQKGQCVKGILINTVMLGAFVKAKKKQKKLAITRKSQGLPEGGAITCDDVMHKYLEDERQKVEAEEALKEKKMAREIKRAAREAASLKQGANRAGRGHXXXXXXXXXXXEG 540
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE) HSP 1 Score: 354 bits (908), Expect = 3.030e-108 Identity = 209/438 (47.72%), Postives = 279/438 (63.70%), Query Frame = 2
Query: 278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSREN---VTSLWSPPSAMAP----RGSQLSSSRGSVCKRIGRRRRTDHRVRGTPRRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNI----APKRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANKAAEEAKAEKA 1558
L +A R+ V R+ L ETVR L D RKTPW+ K PGK W+ FL+RHPRV TRIY NR+T+ EP I FY W ++ P+ADH+HNTDET TT KT KA+ +AGQKVV S+R+NSREN VT++ + S AP +G +L ++ G D R T ++ VF+ YL DFH+Q +RGL+DGKP++L+LDGHASHV +VI+L +EL+IVLFQLPSHTSHITQPL++ A KR +K + + G P +F+ +N++SFAGAGLWP +M+RAM L+GT KR T RP L DVPIA +QLE+D+G+R +R+L+A GH G RV TVMLG ++RQRKRAKK+ T+R + G+PDG +T+++ L AE+ERA+K +AKAE+A
Sbjct: 311 LLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPD--WFAEKNGP---PDARYTCTDSSFMQG--NVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKRAKKMATSRGSLGLPDGANITAEDFLAKVAEKERADKEESDAKAERA 740
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5L2E0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E0_9PHAE) HSP 1 Score: 336 bits (861), Expect = 6.260e-106 Identity = 205/459 (44.66%), Postives = 277/459 (60.35%), Query Frame = 2
Query: 278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSRENVTS-LWSPPSAMAPRGSQLSSSRGSVCKRIGRRRRTD-HRVRGTPRRTLRSCS-------TVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANKAAEEAKAEKAXXREQKRADKETASLAWQA 1615
L FAAR+F V RV LR+ VR+L +DGR+ W+ ++ PGK W+ FL+RHPRV+ TRIY NR+TE+EEP + +F+E W + P A+H+HNTDET G R + NV + + + +AP + K G+R +TD R P +C+ VF+ YL DFHKQ G+RGLLDGKP++L+LDGHASHV +V KL + L I+ FQLPSHTSHITQPL++ K+ ++ + N+ G P + SF+P NK+SFAGAGLWP + +RA+ L+GT +K R +RP L DVPIAA +QLE D+G+RALR L+ GH++ G R GTV+L G+L QRK AKK+ T+R + G+PDGG +T+ E LDA AE+ERA+KA +AKA +A RE+KRA K A L QA
Sbjct: 49 LLFAARNFLAVDRVHLRDAVRRLCNDGRRIIWDPDEGPGKDWLAGFLRRHPRVAERSTRIYEANRMTEDEEPRMVQFHERWAALLDEVKPAANHVHNTDET--------------------AGCSREPAATNVVANISADDHTLAPT---------IIFK--GQRLQTDWFAERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVSKLAMNLKIISFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGSLPLKRDMPGVIADAWKLSFAPEINKSSFAGAGLWPVNKERALGQLKGTANKKERRDERPPLQDVPIAALNEQLEIDIGERALRVLKGQGHTVTGIREGTVLLDGLLTQRKHAKKMATSRGSLGLPDGGNITAPEFLDAVAEKERADKAESDAKAARAKVREEKRATKAAAELLRQA 476
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5KHG4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG4_9PHAE) HSP 1 Score: 323 bits (828), Expect = 3.680e-101 Identity = 200/430 (46.51%), Postives = 251/430 (58.37%), Query Frame = 2
Query: 278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSRENVTSL---------WSPPSAMAPRGSQLSSSRGSVCKRIGRRRRTDHRVRGTPRRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANK 1528
L +A RH VGR+ L ET RQL +DGR W+ KRPGK W+ FLKRHPRVS TRIY +NRITE++EP +Y+ W P+ADH+HNTDET TT TKT KAFAE GQKVV SMRSNSREN T + W+P + QL +R G + D R T ++ VF+ YL DF+KQ +RG+LDGKP++LVL GHAS V Y+VIKL +EL+I+LFQLPSHTSHITQPL++ K+ +K + + G P+ +RSF+P +NKASF GAGLWP LEE +G+R LR+L+AGG +I G +VGTVMLGG+L QRKRAKKL T+R + G+PDGG + S+E L A RERA K
Sbjct: 8 LLYAGRHCLAVGRLHLLETDRQLCNDGRSITWDPGKRPGKDWLAGFLKRHPRVSERTTRIYESNRITEDKEPRNVEYYKKWAALFDEHKPEADHVHNTDETGTTPQGTKTMKAFAEVGQKVVESMRSNSRENATVVTTISTNGVTWAPTIIFKGQRLQLD----WFAERNGPK---DARYTCTDSSFMQG--DVFIKYLKDFYKQLDDRGVLDGKPHILVLGGHASLVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGSLPLKRDVPSVIAAAWQRSFTPERNKASFGGAGLWP-------------------------------------LEEAIGERVLRQLKAGGQTITGLKVGTVMLGGLLTQRKRAKKLTTSRGSLGLPDGGNINSEEFL-AKVNRERARK 390
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JGP6_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP6_9PHAE) HSP 1 Score: 323 bits (828), Expect = 9.370e-100 Identity = 214/534 (40.07%), Postives = 291/534 (54.49%), Query Frame = 2
Query: 278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSRENVT---SLWSPPSAMAP----RGSQLSSSRGSVCKRIGRRRRTDHRVRGTPRRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRC---------------------------------------------------R*SAT*PA*S---GGLGE---RSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANKAAEEAKAEKAXXREQKRADKETASLAWQASRRGRGEASGVRLGCERIEG 1675
L +AARHF + R L+E VRQL +DGR PW+A PG++W+ F KRHP +S RIY NRI ++E ++ FY+ +GE+V E ADHL NTDET +T TKT K AE+GQKVVG++ S SRENVT ++ + + +AP +G +L + GR + R+ T ++ VFVNY+ DFH+Q +RGL++G P+VLVLDGHASHV Y+V+KL +L+IVL+Q+PSH+SH+ QPL++ KR K + GR R T PA S G LG+ RSFS QN +SFAGAGLWP D +RAM LQG GKRK R RP + D+ +A S K L ++LG R +R L+ G ++G + TVM+G ++ +K+ KKL TR + G+P+GG++T +++ Y ER AEEA EK RE KRA +E ASL A+R GRG EG
Sbjct: 30 LLYAARHFIGIDRAALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSECSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTPQGTKTMKVIAESGQKVVGAIHSKSRENVTVVVTISTVGATLAPWIIYKGQRLQADWAK-----GRNAPPNARLAVTNSSFMQGI--VFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREIPKVLSAFQARNGGRVPAKSDMLGLLGDAWLRSFSEEQNISSFAGAGLWLVDGERAMGQLQGWRFPTRILPTVPAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKDLADNLGPRTVRELQQKGQCVKGILINTVMVGAFVKAKKKQKKLAITRKSQGLPEGGVITCDDVMQKYLADERQKVEAEEALKEKRLAREIKRAAREDASLEQGANRAGRGHXXXXXXXXXXXEG 556
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JK80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK80_9PHAE) HSP 1 Score: 324 bits (831), Expect = 1.090e-99 Identity = 209/491 (42.57%), Postives = 290/491 (59.06%), Query Frame = 2
Query: 278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTED-PKADHLHNTDETD-------TTTLSTKTEKAFAEAGQKVVGSMRSNSRENVT---SLWSPPSAMAP----RGSQLSSSRGSVCKRIGRRRRTDHRVRGTPRRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRCR*SAT*PA*S---GGLGE---RSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANKAAEEAKAEKAXXREQKRADKETASLAWQASRRGRGEASGVRLGCERIEG 1675
L +AARHF + R L+E VRQL +DGR W+A PG++W+ F KRHP +S RIY NRI ++E C++ FY+ +GE+V E+ P + TD +T TKT K AE+GQKVVG+MRSNSR+NVT ++ + + +AP +G ++ + GR + R+ T ++ TVFVNY+ DFH+Q +RGL++G P+VLVLDGHASHV Y+V+KL +L+IVL+Q+PSH+SH+ QPL++ K +K + GR PA S G LG+ RSFS QN +SFAGAGLWP D +RAM LQG GKRK R RP + D+ +A S K L ++LG R +R L+ G ++G + TVMLG ++ +K+ KKL TR + G+P+GG++T +++ Y E ER AEEA EK+ RE KRA +E ASL A+R GRG EG
Sbjct: 71 LLYAARHFIGIDRTALQEHVRQLCNDGRDISWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETCLQTFYKDFGEFVDKENIPTCGTQMRQEYTDLERAVPGSTPQGTKTMKVIAESGQKVVGAMRSNSRDNVTVVVTISAAGATLAPWIIYKGQRMQADWVK-----GRNGPPNARLAVTDSSFMQG--TVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKWEITKVLSAFPARNGGRV------PAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKDLADNLGPRTVRELQQKGQCVKGILINTVMLGAFVKAKKKQKKLAITRKSQGLPEGGVITCDDVMPKYLEDERQKVEAEEALKEKSMAREIKRAAREDASLEQGANRAGRGHXXXXXXXXXXXEG 548
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JE68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE68_9PHAE) HSP 1 Score: 311 bits (798), Expect = 3.590e-96 Identity = 206/483 (42.65%), Postives = 259/483 (53.62%), Query Frame = 2
Query: 413 FLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSRENVT---------SLWSPPS------------------------------------------------AMAPRG-------------------------SQLSSSRGSVCKRI----------------GRRRRTD-HRVRGTPRRTLRSCST-------VFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVP-LQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKEILDAYAERERANK 1528
FLKRHPRVS TRIY +NRITE++EP I FY+ W ++ P+ADH+HNTDET TT TKT KAFAEA QKVV SM SNSREN T + W+P + A PR S LS+SR + G++ + D R P+ +C+ VF+ YL DFHKQ +RG+LD KP++LVLDGHASHV Y+VIKL +E++I+LFQLPSHTSHITQPL++ K+ +K + + G P RSF+P ++KASF GA LWP DMDRA+ P LQGT KRK PT RP L DVPIA + +QLEE +G R LR+L+AGG +I GP+VGTVMLGG+L QRKRAKKL T+R + G+PDGG S+E L +ERA+K
Sbjct: 5 FLKRHPRVSERTTRIYESNRITEDKEPRIVEFYKKWAAFLDEHKPEADHVHNTDETGTTLQGTKTMKAFAEAEQKVVESMLSNSRENTTVVTTNSANGATWAPTTIFKGQQLQPDWFAERNGPKDARYTCANSSFMQGDVFIKYLKDXLYLTCAARPRTCSMWTTLQGTKTMKAFAEAEQKVVESMLSNSRENTTVVTTNSANGATWAPTTIFKGQQLQPDWFAERNGPKDARYTCANSSFMQGDVFIKYLKDFHKQLDDRGVLDRKPHILVLDGHASHVSYEVIKLAMEVNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLSLKRDVPGVIAAAWRRSFTPERSKASFGGAALWPVDMDRALPPGLQGTAKRKEGPTGRPPLEDVPIAMTHEQLEEAIGARGLRQLKAGGRTIIGPKVGTVMLGGLLTQRKRAKKLATSRGSLGLPDGGNTNSEEFLAKVDAKERADK 487
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE) HSP 1 Score: 308 bits (789), Expect = 3.100e-95 Identity = 184/409 (44.99%), Postives = 237/409 (57.95%), Query Frame = 2
Query: 278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSRENVTSL---------WSPPSAMAPRGSQLSSSRGSVCKRIGRRRRTDHRV-RGTPRRTLRSCST-------VFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAPKRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAA 1453
L FAAR+F VGRV LR+ VR+L +DGR+ PW+ K PGK W+ F +RHPRV+ TRIY NRITE+EEP + +FYE W + P+A+H+HNTDET TT TKT KAFAE+GQKVVGSMR+NSREN T + W+P G+R + D V R P +C+ VF+NYL DFHKQ G+RGLLDGKP++L+LDGHASHV +VIKL + L I+LFQLPSHTSHITQPL++ + SF NK+ FAGA LWP + +RA+ L+GT K+K R +R L D+PIAA +Q E+D+G RALR LR GH++ G +R R+RA + L + +A
Sbjct: 70 LLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADGHTWAPTIIFK-----------------GQRLQADCFVERNGPEGARHTCTDSSFMQGDVFMNYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDV---------------------------------VAFGSFKKSINKSLFAGASLWPVNKERALGRLKGTAKKKERRDERTPLQDIPIAAHNEQPEKDIGVRALRVLRGQGHTVTG-----------IRTRRRATRRLRGQKSA 417
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE) HSP 1 Score: 298 bits (763), Expect = 3.290e-91 Identity = 180/421 (42.76%), Postives = 244/421 (57.96%), Query Frame = 2
Query: 278 LPFAARHFFPVGRVQLRETVRQLYSDGRKTPWEANKRPGKAWVQDFLKRHPRVSGLITRIYGTNRITENEEPCIRRFYEVWGEYVKTEDPKADHLHNTDETDTTTLSTKTEKAFAEAGQKVVGSMRSNSREN---VTSLWSPPSAMAP----RGSQLSSSRGSVCKRIGRRRRTDHRVRGTP------RRTLRSCSTVFVNYLNDFHKQHGERGLLDGKPNVLVLDGHASHVCYDVIKLDIELDIVLFQLPSHTSHITQPLNIAP----KRR*SKCSRPTHSNTEGRCR*SAT*PA*SGGLGERSFSPHQNKASFAGAGLWPADMDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAGGHSIEGPRVGTVMLGGILRQRKRAKKLLTTRAAAGVPDGGILTSKE 1489
L +A R+F P+ L E VRQL +DGR PW +K PG++W++ FL RH R+S + RIY +NR+T E+ + +FY+ WG+++ P ADH+ NTDE+ T T+ ++ AE GQ VV MRS SREN VT++ + + +AP +G + + + + G P + C VF+ Y+ +FHKQ G+R LLDGKP+VLVLDGHASHV DVIKL I L+I L QLPSH SHITQPL++A K+ +K + + G G SF+P NKASFAGAGLWP D +RA+ L KRK TDRP L DVPIA + ++LEE +G R +R LRA GH+I G RV TV+LG L + + K RA G P+G +L++ E
Sbjct: 85 LLYAGRNFIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTSAEDERLHKFYDFWGQFIDEHQPAADHVWNTDESGGTVQGTQGQRVMAERGQPVVAQMRSTSRENCTIVTTINAAGAVLAPTIIFKGQRFNGDWVAD-------------LNGPPGAYYDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAGAGLWPVDRERALSRLLRP-KRKVTETDRPPLEDVPIAVTNERLEELIGDRGVRALRAKGHTITGLRVSTVVLGNFLPNKNKRPKGPPKRANLGRPEGNLLSAPE 491 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig70.18185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig70.18185.1 >prot_F-serratus_M_contig70.18185.1 ID=prot_F-serratus_M_contig70.18185.1|Name=mRNA_F-serratus_M_contig70.18185.1|organism=Fucus serratus male|type=polypeptide|length=169bp MDRAMVPLQGTGKRKPRPTDRPLLADVPIAASQKQLEEDLGKRALRRLRAback to top mRNA from alignment at F-serratus_M_contig70:434525..436645+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig70.18185.1 ID=mRNA_F-serratus_M_contig70.18185.1|Name=mRNA_F-serratus_M_contig70.18185.1|organism=Fucus serratus male|type=mRNA|length=2121bp|location=Sequence derived from alignment at F-serratus_M_contig70:434525..436645+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig70:434525..436645+ >mRNA_F-serratus_M_contig70.18185.1 ID=mRNA_F-serratus_M_contig70.18185.1|Name=mRNA_F-serratus_M_contig70.18185.1|organism=Fucus serratus male|type=CDS|length=1014bp|location=Sequence derived from alignment at F-serratus_M_contig70:434525..436645+ (Fucus serratus male)back to top |