mRNA_F-serratus_M_contig70.18183.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig70.18183.1 vs. uniprot
Match: A0A6H5K2D2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2D2_9PHAE) HSP 1 Score: 206 bits (524), Expect = 4.870e-63 Identity = 109/158 (68.99%), Postives = 122/158 (77.22%), Query Frame = 1
Query: 10 LACAEHTERDIVDRSVSVTWDQIANLRDAKLLLQEVVVLPQWMPDYLRGIRRLWKGKKCTSSPNARVLMYGPPGTGKTMLAKAFAAECKTTFFNVSASTLGSKYRGGSEKIVRIVFEMARYYAPRQGQARVKAFVRGSNTGGDGDHEASRRVKTELLV 483
+ +E ERDIV+R VSVTWDQIA+L+DAK LLQE VVLP WMPDY +GIRR WKG VLM+GPPGTGKTMLAKA AAECKTTFFNVSASTLGSKYRG SEK+VR++FEMARYYAP + GS G DG+HEASRRVKTEL+V
Sbjct: 1 MVSSEAKERDIVERGVSVTWDQIADLKDAKQLLQEAVVLPLWMPDYFKGIRRPWKG----------VLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGSR-GSDGEHEASRRVKTELMV 147
BLAST of mRNA_F-serratus_M_contig70.18183.1 vs. uniprot
Match: D8LRZ3_ECTSI (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ3_ECTSI) HSP 1 Score: 206 bits (523), Expect = 2.590e-59 Identity = 109/154 (70.78%), Postives = 120/154 (77.92%), Query Frame = 1
Query: 22 EHTERDIVDRSVSVTWDQIANLRDAKLLLQEVVVLPQWMPDYLRGIRRLWKGKKCTSSPNARVLMYGPPGTGKTMLAKAFAAECKTTFFNVSASTLGSKYRGGSEKIVRIVFEMARYYAPRQGQARVKAFVRGSNTGGDGDHEASRRVKTELLV 483
E ERDIV+R VSVTWDQIA+L+DAK LLQE VVLP WMPDY +GIRR WKG VLM+GPPGTGKTMLAKA AAECKTTFFNVSASTLGSKYRG SEK+VR++FEMARYYAP + GS G DG+HEASRRVKTEL+V
Sbjct: 437 ESLERDIVERGVSVTWDQIADLKDAKQLLQEAVVLPLWMPDYFKGIRRPWKG----------VLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGSR-GSDGEHEASRRVKTELMV 579
BLAST of mRNA_F-serratus_M_contig70.18183.1 vs. uniprot
Match: A0A7S2SSB0_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSB0_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.540e-55 Identity = 102/157 (64.97%), Postives = 118/157 (75.16%), Query Frame = 1
Query: 22 EHTERDIVDRSVSVTWDQIANLRDAKLLLQEVVVLPQWMPDYLRGIRRLWKGKKCTSSPNARVLMYGPPGTGKTMLAKAFAAECKTTFFNVSASTLGSKYRGGSEKIVRIVFEMARYYAPRQ---GQARVKAFVRGSNTGGDGDHEASRRVKTELLV 483
E ERDIVD V+V WDQIA+L +AK LLQE VVLP WMPDY +GIRR W+G VLM+GPPGTGKTMLAKA A+EC+TTFFNVSAS+LGSKYRG SEK+VR++FEMARYYAP + A RGS +G+HEASRRVKTEL+V
Sbjct: 251 ETLERDIVDHGVAVGWDQIADLAEAKALLQEAVVLPLWMPDYFKGIRRPWRG----------VLMFGPPGTGKTMLAKAIASECRTTFFNVSASSLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDAIAGARGS----EGEHEASRRVKTELMV 393
BLAST of mRNA_F-serratus_M_contig70.18183.1 vs. uniprot
Match: F0Y1I1_AURAN (AAA domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1I1_AURAN) HSP 1 Score: 186 bits (471), Expect = 1.980e-55 Identity = 99/154 (64.29%), Postives = 115/154 (74.68%), Query Frame = 1
Query: 22 EHTERDIVDRSVSVTWDQIANLRDAKLLLQEVVVLPQWMPDYLRGIRRLWKGKKCTSSPNARVLMYGPPGTGKTMLAKAFAAECKTTFFNVSASTLGSKYRGGSEKIVRIVFEMARYYAPRQGQARVKAFVRGSNTGGDGDHEASRRVKTELLV 483
E ERDIV+ VSVTWD+IA L++AK LLQE VVLP WMPD+ RGIRR WKG VLM+GPPGTGKTMLAKA AAECKTTFFNVSASTL SK+RG SEK+VR++F+MAR++AP + G GG +HEASRRVKTEL+V
Sbjct: 6 EGIERDIVETGVSVTWDEIAELKEAKQLLQEAVVLPLWMPDFFRGIRRPWKG----------VLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLSSKWRGESEKMVRLLFDMARWHAPSTVFFDEIDSLAGQR-GGANEHEASRRVKTELMV 148
BLAST of mRNA_F-serratus_M_contig70.18183.1 vs. uniprot
Match: W7U5R9_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5R9_9STRA) HSP 1 Score: 192 bits (489), Expect = 4.690e-55 Identity = 101/154 (65.58%), Postives = 117/154 (75.97%), Query Frame = 1
Query: 22 EHTERDIVDRSVSVTWDQIANLRDAKLLLQEVVVLPQWMPDYLRGIRRLWKGKKCTSSPNARVLMYGPPGTGKTMLAKAFAAECKTTFFNVSASTLGSKYRGGSEKIVRIVFEMARYYAPRQGQARVKAFVRGSNTGGDGDHEASRRVKTELLV 483
E ER+IV++ V+V+WD IA+L++AK LLQE VVLP WMPDY +GIRR WKG VL++GPPGTGKTMLAKA A EC TTFFNVSASTLGSKYRG SEK+VRI+FEMARYYAP + GS GG G+HEASRRVKTEL+V
Sbjct: 339 ESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKG----------VLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSR-GGSGEHEASRRVKTELMV 481
BLAST of mRNA_F-serratus_M_contig70.18183.1 vs. uniprot
Match: A0A7S3YD60_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD60_HETAK) HSP 1 Score: 183 bits (464), Expect = 1.710e-54 Identity = 97/150 (64.67%), Postives = 111/150 (74.00%), Query Frame = 1
Query: 34 RDIVDRSVSVTWDQIANLRDAKLLLQEVVVLPQWMPDYLRGIRRLWKGKKCTSSPNARVLMYGPPGTGKTMLAKAFAAECKTTFFNVSASTLGSKYRGGSEKIVRIVFEMARYYAPRQGQARVKAFVRGSNTGGDGDHEASRRVKTELLV 483
RDIV++ V TWD IA L++AK LLQE VVLP WMP+Y +GIRR WKG VLM+GPPGTGKT+LAKA AAEC+TTFFNVSASTL SKYRG SEK+VRI+FEMARYYAP + GS G +HEASRRVKTEL+V
Sbjct: 1 RDIVEQGVVTTWDSIAGLKEAKQLLQEAVVLPLWMPEYFQGIRRPWKG----------VLMFGPPGTGKTLLAKAVAAECRTTFFNVSASTLSSKYRGDSEKMVRILFEMARYYAPSTIFFDEIDSLAGSR-GSSSEHEASRRVKTELMV 139
BLAST of mRNA_F-serratus_M_contig70.18183.1 vs. uniprot
Match: A0A4D9D8G0_9STRA (Katanin p60 ATPase-containing subunit A1 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8G0_9STRA) HSP 1 Score: 192 bits (489), Expect = 3.700e-54 Identity = 101/154 (65.58%), Postives = 117/154 (75.97%), Query Frame = 1
Query: 22 EHTERDIVDRSVSVTWDQIANLRDAKLLLQEVVVLPQWMPDYLRGIRRLWKGKKCTSSPNARVLMYGPPGTGKTMLAKAFAAECKTTFFNVSASTLGSKYRGGSEKIVRIVFEMARYYAPRQGQARVKAFVRGSNTGGDGDHEASRRVKTELLV 483
E ER+IV++ V+V+WD IA+L++AK LLQE VVLP WMPDY +GIRR WKG VL++GPPGTGKTMLAKA A EC TTFFNVSASTLGSKYRG SEK+VRI+FEMARYYAP + GS GG G+HEASRRVKTEL+V
Sbjct: 339 ESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKG----------VLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSR-GGSGEHEASRRVKTELMV 481
BLAST of mRNA_F-serratus_M_contig70.18183.1 vs. uniprot
Match: UPI00101AA6D6 (katanin p60 ATPase-containing subunit A-like 1 n=1 Tax=Eptesicus fuscus TaxID=29078 RepID=UPI00101AA6D6) HSP 1 Score: 175 bits (444), Expect = 3.030e-53 Identity = 94/159 (59.12%), Postives = 111/159 (69.81%), Query Frame = 1
Query: 22 EHTERDIVDRSVSVTWDQIANLRDAKLLLQEVVVLPQWMPDYLRGIRRLWKGKKCTSSPNARVLMYGPPGTGKTMLAKAFAAECKTTFFNVSASTLGSKYRGGSEKIVRIVFEMARYYAPRQGQARVKAFVRG-----SNTGGDGDHEASRRVKTELLV 483
E ERDIV R++S+ WD IA+L +AK LL+E VVLP WMPD+ +GIRR WKG VLM GPPGTGKTMLAKA A EC TTFFNVS+STL SKYRG SEK+VR++FEMAR+YAP F+ S G +HEASRRVK+ELL+
Sbjct: 24 ETLERDIVSRNLSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKG----------VLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAP------TTIFIDEIDSICSRRGTSDEHEASRRVKSELLI 166
BLAST of mRNA_F-serratus_M_contig70.18183.1 vs. uniprot
Match: A0A7S0I7W0_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I7W0_MICPS) HSP 1 Score: 176 bits (447), Expect = 9.210e-52 Identity = 94/162 (58.02%), Postives = 113/162 (69.75%), Query Frame = 1
Query: 13 ACAEHTERDIVDRSVSVTWDQIANLRDAKLLLQEVVVLPQWMPDYLRGIRRLWKGKKCTSSPNARVLMYGPPGTGKTMLAKAFAAECKTTFFNVSASTLGSKYRGGSEKIVRIVFEMARYYAPRQGQARVKAFVRG-----SNTGGDGDHEASRRVKTELLV 483
A AE+ RDI+D S SV WD IA L DAK LL+E VVLP WMP+Y RGIRR WKG VLM+GPPGTGKTMLAKA A EC TTFFN+S+STL SKYRG SE++VRI+F++AR++AP F+ ++ G G+HEASRRVK+E LV
Sbjct: 14 ALAENLRRDILDASPSVRWDDIAGLNDAKRLLEEAVVLPLWMPEYFRGIRRPWKG----------VLMFGPPGTGKTMLAKAVATECGTTFFNISSSTLASKYRGESERMVRILFDLARHHAPST------IFIDEIDSLCTSRGASGEHEASRRVKSEFLV 159
BLAST of mRNA_F-serratus_M_contig70.18183.1 vs. uniprot
Match: A0A7S3HF63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HF63_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.640e-51 Identity = 93/154 (60.39%), Postives = 111/154 (72.08%), Query Frame = 1
Query: 22 EHTERDIVDRSVSVTWDQIANLRDAKLLLQEVVVLPQWMPDYLRGIRRLWKGKKCTSSPNARVLMYGPPGTGKTMLAKAFAAECKTTFFNVSASTLGSKYRGGSEKIVRIVFEMARYYAPRQGQARVKAFVRGSNTGGDGDHEASRRVKTELLV 483
E E +I+D V+V+W+ IA L +AK LLQE VVLP WMPDY +GIRR WKG VLM+GPPGTGKTMLAKA A+EC TTFFNVSASTL SK+RG +EK+VRI+F+MARYY+P + GS G +HEASRRVKTEL+V
Sbjct: 140 EGIESNILDTKVNVSWESIAGLGEAKALLQEAVVLPLWMPDYFKGIRRPWKG----------VLMFGPPGTGKTMLAKAVASECNTTFFNVSASTLSSKWRGEAEKMVRILFDMARYYSPSTIFFDEIDSLAGSR-GASNEHEASRRVKTELMV 282 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig70.18183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig70.18183.1 >prot_F-serratus_M_contig70.18183.1 ID=prot_F-serratus_M_contig70.18183.1|Name=mRNA_F-serratus_M_contig70.18183.1|organism=Fucus serratus male|type=polypeptide|length=162bp MRLLACAEHTERDIVDRSVSVTWDQIANLRDAKLLLQEVVVLPQWMPDYLback to top mRNA from alignment at F-serratus_M_contig70:421909..422647- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig70.18183.1 ID=mRNA_F-serratus_M_contig70.18183.1|Name=mRNA_F-serratus_M_contig70.18183.1|organism=Fucus serratus male|type=mRNA|length=739bp|location=Sequence derived from alignment at F-serratus_M_contig70:421909..422647- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig70:421909..422647- >mRNA_F-serratus_M_contig70.18183.1 ID=mRNA_F-serratus_M_contig70.18183.1|Name=mRNA_F-serratus_M_contig70.18183.1|organism=Fucus serratus male|type=CDS|length=972bp|location=Sequence derived from alignment at F-serratus_M_contig70:421909..422647- (Fucus serratus male)back to top |