mRNA_F-serratus_M_contig70.18174.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig70.18174.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 191 bits (485), Expect = 5.850e-52 Identity = 94/161 (58.39%), Postives = 119/161 (73.91%), Query Frame = 2
Query: 116 FSMFGRPVSAAAGAEGEEEDPVEQQVSEELLRYQALFTHPDELDPSEVLTYWAKKGKHAFPLLTPVAQQTFGNQASASQVERDFSGCDNLLVPNRSRIETYWVEMVMFLKANYSSIPAYKDIPQIASEDIRKHLPARFDGQDKDLLDAEASIDPLVNNAPP 598
F+ FGR V E ++ D VEQ+V+ E++RY+ +F ++L P+EVL+YWA G+H+FP L VAQQTFG+Q SA+ VERDFSGC LVPNRSR+E YWVEMVMFL AN+ IP Y +IP I S+DIRK LPA+F G D+DLL AE ++DPL NN PP
Sbjct: 687 FAAFGRSVGGVE--ESKQGDAVEQEVANEIMRYKGVFMTSNDLHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKFKGTDEDLLSAEMALDPLRNNTPP 845
BLAST of mRNA_F-serratus_M_contig70.18174.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 175 bits (444), Expect = 8.800e-50 Identity = 90/172 (52.33%), Postives = 122/172 (70.93%), Query Frame = 2
Query: 116 FSMFGRPVSAAAGAEGEEEDPVEQQVSE----ELLRYQALFTHPDELDPSEVLTYWAKKGKHAFPLLTPVAQQTFGNQASASQVERDFSGCDNLLVPNRSRIETYWVEMVMFLKANYSSIPAYKDIPQIASEDIRKHLPARFDGQDKDLLDAEASIDPLVNNAPPTPSGMDI 619
FS+FGR + ++ + +ED ++++ E EL Y++LF DELD EVL +W + GK+ FP L PVAQQ FGNQA+ SQVERDFSG LL PNRSR++TYWVE+VMFL AN++ IP K IP +A+++IR LPARF G+D DL+ AEA D L+N APP+ + +D+
Sbjct: 141 FSLFGRGDARSSTDDMADEDSEDRKLGEVVAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPARFHGRDADLMAAEAIFDVLMNTAPPSVNDIDL 312
BLAST of mRNA_F-serratus_M_contig70.18174.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE) HSP 1 Score: 164 bits (416), Expect = 1.100e-47 Identity = 79/134 (58.96%), Postives = 98/134 (73.13%), Query Frame = 2
Query: 185 QQVSEELLRYQALFTHPDELDPSEVLTYWAKKGKHAFPLLTPVAQQTFGNQASASQVERDFSGCDNLLVPNRSRIETYWVEMVMFLKANYSSIPAYKDIPQIASEDIRKHLPARFDGQDKDLLDAEASIDPLVN 586
Q VS+E+ RY +L+ +ELD E+L +W + G+ FP L PVAQQ FGNQA A+QVERDFSGC NLL NRSR++TYWVEMVMFL AN+ IP +KDIP IA++DI LP RF+G D DL AEA+ D + N
Sbjct: 6 QHVSQEIERYHSLYITAEELDTREILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPRFNGGDADLAAAEAAFDVIKN 139
BLAST of mRNA_F-serratus_M_contig70.18174.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.040e-45 Identity = 89/144 (61.81%), Postives = 104/144 (72.22%), Query Frame = 2
Query: 158 EGEEEDPV-EQQVSEELLRYQALFTHPDELDPSEVLTYWAKKGKHAFPLLTPVAQQTFGNQASASQVERDFSGCDNLLVPNRSRIETYWVEMVMFLKANYSSIPAYKDIPQIASEDIRKHLPARFDGQDKDLLDAEASIDPLVN 586
EG+ ED V QQVS+EL R+QAL+ +ELD EVL +W G+ FP L PVAQQ GNQA A+QVERDFS C NLL NRSRI+TYWVEMVMFL NY IPA+KDIP IA++DIR LP RF+G D DL AEA+ D + N
Sbjct: 469 EGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEATFDVIEN 612
BLAST of mRNA_F-serratus_M_contig70.18174.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE) HSP 1 Score: 159 bits (402), Expect = 1.370e-44 Identity = 78/126 (61.90%), Postives = 91/126 (72.22%), Query Frame = 2
Query: 209 RYQALFTHPDELDPSEVLTYWAKKGKHAFPLLTPVAQQTFGNQASASQVERDFSGCDNLLVPNRSRIETYWVEMVMFLKANYSSIPAYKDIPQIASEDIRKHLPARFDGQDKDLLDAEASIDPLVN 586
R+QAL+ +ELD EVL +W G+ FP L PVAQQ GNQA A+QVERDFS C NLL NRSRI+TYWVEMVMFL NY IPA+KDIP IA++DIR LP RF+G D DL AEA+ D + N
Sbjct: 89 RFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEAAFDVIEN 214
BLAST of mRNA_F-serratus_M_contig70.18174.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 157 bits (398), Expect = 3.370e-41 Identity = 87/196 (44.39%), Postives = 116/196 (59.18%), Query Frame = 2
Query: 41 GPFKRHRTSLAGXXXXXXXXXXXXTFSMFGRPVSAAAGAEGEEEDPVEQQVSEELLRYQALFTHPDELDPSEVLTYWAKKGKHAFPLLTPVAQQTFGNQASASQVERDFSGCDNLLVPNRSRIETYWVEMVMFLKANYSSIPAYKDIPQIASEDIRKHLPARFDGQDKDLLDAEASIDPLVNNAPPTPSGMDIN*D 628
GPFKR RTS G G + +G +G+ V+ E+ R +AL + +L P +VL YW + G+HAFP L VAQQ FG+QA A+Q+ERDFS L NR+R++ YWVEMV+FLKAN+ IP Y DIP + S+ IR+ LPA+F G ++ LLDAE ++DPL N PP S + N D
Sbjct: 321 GPFKRARTSGNGSARNDAGEDHFAVLCTAGAVEQSGSGDDGD------LSVAGEIQRSRALQMNSSDLQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRECLPAKFKGTNEYLLDAEMALDPLENKTPPNTSAIGDNGD 510
BLAST of mRNA_F-serratus_M_contig70.18174.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 157 bits (396), Expect = 6.350e-41 Identity = 77/123 (62.60%), Postives = 97/123 (78.86%), Query Frame = 2
Query: 251 SEVLTYWAKKGKHAFPLLTPVAQQTFGNQASASQVERDFSGCDNLLVPNRSRIETYWVEMVMFLKANYSSIPAYKDIPQIASEDIRKHLPARFDGQDKDLLDAEASIDPLVNNAPPTPSGMDI 619
SEVL+YW + GKHAFP L VAQQTFGNQASA+ VERDFSGC +VPNRSR++ YWVEMVMFLKAN++S +IPQI +DIRK LPA+F+G D+D L+AE ++ PL N+APP +G+ +
Sbjct: 388 SEVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRI-NIPQIDPKDIRKCLPAKFEGTDEDHLNAEMALYPLSNDAPPAEAGLGL 509
BLAST of mRNA_F-serratus_M_contig70.18174.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 158 bits (399), Expect = 8.670e-41 Identity = 87/162 (53.70%), Postives = 106/162 (65.43%), Query Frame = 2
Query: 44 PFKRHRTSLAGXXXXXXXXXXXXTFSMFGRPVSAAAGAEGEEEDPVEQQVSEELLRYQALFTHPDELDPSEVLTYWAKKGKHAFPLLTPVAQQTFGNQASASQVERDFSGCDNLLVPNRSRIETYWVEMVMFLKANYSSIPAYKDIPQIASEDIRKHLPARF 529
PFKR RTS A FSMFG A + ++G + D VE++VS E++RY+ +F P +L PS+VL YW K GK FP L VAQQTFG+QASA+Q+ERDFS C NRSR E YW+EMVM LK NY IP YKDIP I S+DIRK LPA++
Sbjct: 424 PFKRARTSGA---VPSRRKNYEDDFSMFGCNEVAPSQSDGGDVDFVEEEVSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAKY 582
BLAST of mRNA_F-serratus_M_contig70.18174.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE) HSP 1 Score: 134 bits (337), Expect = 2.420e-36 Identity = 66/98 (67.35%), Postives = 74/98 (75.51%), Query Frame = 2
Query: 293 FPLLTPVAQQTFGNQASASQVERDFSGCDNLLVPNRSRIETYWVEMVMFLKANYSSIPAYKDIPQIASEDIRKHLPARFDGQDKDLLDAEASIDPLVN 586
FP L PVAQQ GNQA A+QVERDFS C NLL NRSRI+TYWVEMVMFL NY IPA+KDIP IA++DIR LP RF+G D DL AEA+ D + N
Sbjct: 2 FPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEAAFDVIEN 99
BLAST of mRNA_F-serratus_M_contig70.18174.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE) HSP 1 Score: 127 bits (318), Expect = 4.810e-31 Identity = 74/144 (51.39%), Postives = 87/144 (60.42%), Query Frame = 2
Query: 158 EGEEEDPV-EQQVSEELLRYQALFTHPDELDPSEVLTYWAKKGKHAFPLLTPVAQQTFGNQASASQVERDFSGCDNLLVPNRSRIETYWVEMVMFLKANYSSIPAYKDIPQIASEDIRKHLPARFDGQDKDLLDAEASIDPLVN 586
EG+ ED V QQVS+EL R+QAL+ A + GNQA A+QVERDFS C NLL NRSRI+TYWVEMVMFL NY IPA+KDIP IA++DIR LP RF+G D DL AEA+ D + N
Sbjct: 199 EGDSEDKVLMQQVSQELERFQALYM---------------------------TAGEVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKCIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEAAFDVIEN 315 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig70.18174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig70.18174.1 >prot_F-serratus_M_contig70.18174.1 ID=prot_F-serratus_M_contig70.18174.1|Name=mRNA_F-serratus_M_contig70.18174.1|organism=Fucus serratus male|type=polypeptide|length=168bp MFGRPVSAAAGAEGEEEDPVEQQVSEELLRYQALFTHPDELDPSEVLTYWback to top mRNA from alignment at F-serratus_M_contig70:152960..154102+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig70.18174.1 ID=mRNA_F-serratus_M_contig70.18174.1|Name=mRNA_F-serratus_M_contig70.18174.1|organism=Fucus serratus male|type=mRNA|length=1143bp|location=Sequence derived from alignment at F-serratus_M_contig70:152960..154102+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig70:152960..154102+ >mRNA_F-serratus_M_contig70.18174.1 ID=mRNA_F-serratus_M_contig70.18174.1|Name=mRNA_F-serratus_M_contig70.18174.1|organism=Fucus serratus male|type=CDS|length=1008bp|location=Sequence derived from alignment at F-serratus_M_contig70:152960..154102+ (Fucus serratus male)back to top |