mRNA_F-serratus_M_contig7.18160.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7.18160.1 vs. uniprot
Match: D7FJ98_ECTSI (Yippee domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ98_ECTSI) HSP 1 Score: 227 bits (578), Expect = 2.300e-68 Identity = 119/168 (70.83%), Postives = 132/168 (78.57%), Query Frame = 2
Query: 782 VPASAS-SGKAVVSVMQKHVYLDGASAVYTCAVCRAHLATRDHVVSECFHGHGGRAFLFERCVNVKVGRPEDRLLMTGMHVVADISCSDCGTELGWKYEEAAEKSQKYKEGKFILEKCSVTLEGCDGDARYGPG----------RGGSNSIIGWGAEQAPFADFG-KW 1249
VP S S +GKA S +K VYL+G +VYTC++CRAHLATRDHVVSECFHGHGGRAFLFERCVNV GRPEDRLL+TGMHVVADISC CG ELGWKYEEAA+KSQKYKEGKFILE+C+VTLEG GD YG R GS+SIIGWGA+ APFA G +W
Sbjct: 105 VPVSGSVAGKA--SSAKKLVYLEGGHSVYTCSMCRAHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADISCKACGAELGWKYEEAADKSQKYKEGKFILERCAVTLEGRSGDGYYGSSSSGRFGGAEQRCGSSSIIGWGADNAPFAGGGSRW 270
BLAST of mRNA_F-serratus_M_contig7.18160.1 vs. uniprot
Match: A0A6H5KMR1_9PHAE (Yippee domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR1_9PHAE) HSP 1 Score: 218 bits (554), Expect = 8.220e-63 Identity = 115/168 (68.45%), Postives = 129/168 (76.79%), Query Frame = 2
Query: 782 VPASAS-SGKAVVSVMQKHVYLDGASAVYTCAVCRAHLATRDHVVSECFHGHGGRAFLFERCVNVKVGRPEDRLLMTGMHVVADISCSDCGTELGWKYEEAAEKSQKYKEGKFILEKCSVTLEGCDGDARYGPG----------RGGSNSIIGWGAEQAPFADFG-KW 1249
VP S S +GKA S K VYL+G +VYTC++CRAHLATRDH+VSECF GHGGRAFLFERCVNV +GRPEDR L+TGMHVVADISC CG ELGWKYEEAA+KSQKYKEGKFILE+C+VTLE GD YG R GS+SIIGWGA+ APFA G +W
Sbjct: 265 VPISGSVAGKA--SSANKLVYLEGGHSVYTCSMCRAHLATRDHLVSECFQGHGGRAFLFERCVNVSIGRPEDRRLLTGMHVVADISCKACGAELGWKYEEAADKSQKYKEGKFILERCAVTLESRSGDGYYGLSSSGRFGGAEQRCGSSSIIGWGADNAPFAGGGSRW 430
BLAST of mRNA_F-serratus_M_contig7.18160.1 vs. uniprot
Match: A0A7R9ZB32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZB32_9STRA) HSP 1 Score: 143 bits (360), Expect = 4.460e-37 Identity = 67/104 (64.42%), Postives = 80/104 (76.92%), Query Frame = 2
Query: 836 VYLDGASAVYTCAVCRAHLATRDHVVSECFHGHGGRAFLFERCVNVKVGRPEDRLLMTGMHVVADISCSDCGTELGWKYEEAAEKSQKYKEGKFILEKCSVTLE 1147
VYLDG AVY CA CR HL + D ++S+ FHG GRA+LF++CVNV VGRPEDRLL+TGMH V DI C CGT +GW Y+ A E SQKYKEGKFI+EK ++ LE
Sbjct: 52 VYLDG-PAVYACAACRTHLTSHDDIISKSFHGRHGRAYLFDQCVNVDVGRPEDRLLITGMHSVCDIKCKRCGTMVGWTYKRAYESSQKYKEGKFIVEKINLHLE 154
BLAST of mRNA_F-serratus_M_contig7.18160.1 vs. uniprot
Match: A0A835YJ11_9STRA (Yippee-like 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ11_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.940e-33 Identity = 58/95 (61.05%), Postives = 75/95 (78.95%), Query Frame = 2
Query: 860 VYTCAVCRAHLATRDHVVSECFHGHGGRAFLFERCVNVKVGRPEDRLLMTGMHVVADISCSDCGTELGWKYEEAAEKSQKYKEGKFILEKCSVTL 1144
+Y+C+ CRAHL+ D V+S+ F G GGRA+L ERCVNV+ G+P+ RLLMTG+H VADISC CGT +GW+YE+A E SQ+YKEGK+ILE + L
Sbjct: 96 IYSCSFCRAHLSCPDSVISKSFTGRGGRAYLLERCVNVRTGKPQQRLLMTGLHTVADISCCGCGTTIGWRYEKAHEPSQRYKEGKYILEATKILL 190
BLAST of mRNA_F-serratus_M_contig7.18160.1 vs. uniprot
Match: A0A2V0PQS1_9CHLO (Protein yippee-like n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PQS1_9CHLO) HSP 1 Score: 129 bits (323), Expect = 1.070e-32 Identity = 64/104 (61.54%), Postives = 72/104 (69.23%), Query Frame = 2
Query: 848 GASAVYTCAVCRAHLATRDHVVSECFHGHGGRAFLFERCVNVKVGRPEDRLLMTGMHVVADISCSDCGTELGWKYEEAAEKSQKYKEGKFILEKCSVTLEGCDG 1159
G VY CA C H A D +VS+ F G GRA+LF VNV VG EDRLL+TG+H VADI C+ CGT LGWKYE A E+SQKYKEGKFILEK V +G DG
Sbjct: 10 GGPRVYACASCGTHAADLDDIVSKAFQGRHGRAYLFSSVVNVAVGPKEDRLLITGLHTVADIFCNVCGTNLGWKYEAAYEQSQKYKEGKFILEKARVVKDGQDG 113
BLAST of mRNA_F-serratus_M_contig7.18160.1 vs. uniprot
Match: A0A1S3V5B5_VIGRR (Protein yippee-like n=4 Tax=Phaseoleae TaxID=163735 RepID=A0A1S3V5B5_VIGRR) HSP 1 Score: 125 bits (315), Expect = 1.230e-31 Identity = 58/98 (59.18%), Postives = 69/98 (70.41%), Query Frame = 2
Query: 860 VYTCAVCRAHLATRDHVVSECFHGHGGRAFLFERCVNVKVGRPEDRLLMTGMHVVADISCSDCGTELGWKYEEAAEKSQKYKEGKFILEKCSVTLEGC 1153
+Y C+ CR H+A D V+S+ F G GRAFLF +NV VG EDR LMTG+H VAD+ CSDC LGWKYE A E+SQKYKEGKF+LEK + E C
Sbjct: 9 LYCCSNCRNHVALHDDVISKAFQGKSGRAFLFGHALNVSVGSKEDRELMTGLHTVADVYCSDCKQVLGWKYERAYEESQKYKEGKFVLEKAKIVRENC 106
BLAST of mRNA_F-serratus_M_contig7.18160.1 vs. uniprot
Match: A0A6U0JJ23_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JJ23_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.780e-31 Identity = 63/133 (47.37%), Postives = 85/133 (63.91%), Query Frame = 2
Query: 836 VYLDGASAVYTCAVCRAHLATRDHVVSECFHGHGGRAFLFERCVNVKVGRPEDRLLMTGMHVVADISCSDCGTELGWKYEEAAEKSQKYKEGKFILEKCSVTLEGCDGDARYGPGRGGSN---SIIGWGAEQA 1225
VYL+G VYTC CR HL + D ++S+ FHG GRA+LF++CVN+ VG EDRLL+TG+H V DI C C +GW Y A E SQKYKEGKFI+EK ++ +E D + G G + WG++++
Sbjct: 3 VYLEG-PCVYTCGQCRTHLTSHDDIISKSFHGRHGRAYLFDQCVNITVGPAEDRLLITGLHSVCDIFCKRCKAMVGWTYARAYESSQKYKEGKFIIEKINLYMEESHYDVNHPAGERGDRWRQRSMSWGSDRS 134
BLAST of mRNA_F-serratus_M_contig7.18160.1 vs. uniprot
Match: A0A165XEI5_DAUCS (Protein yippee-like n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A165XEI5_DAUCS) HSP 1 Score: 125 bits (313), Expect = 2.250e-31 Identity = 57/96 (59.38%), Postives = 69/96 (71.88%), Query Frame = 2
Query: 860 VYTCAVCRAHLATRDHVVSECFHGHGGRAFLFERCVNVKVGRPEDRLLMTGMHVVADISCSDCGTELGWKYEEAAEKSQKYKEGKFILEKCSVTLE 1147
+Y+C CR H+A D ++S+ F G GRAFLF +N+ VGR EDR LMTG+H VADISC+DC LGWKYE A E +QKYKEGKFILEK + E
Sbjct: 8 LYSCCKCRNHIALHDDIISKAFQGRNGRAFLFSHAMNITVGRKEDRNLMTGLHTVADISCADCCEVLGWKYERAYEPTQKYKEGKFILEKSKIVNE 103
BLAST of mRNA_F-serratus_M_contig7.18160.1 vs. uniprot
Match: A0A5J4YFI8_9CHLO (Protein yippee-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YFI8_9CHLO) HSP 1 Score: 125 bits (313), Expect = 2.780e-31 Identity = 61/104 (58.65%), Postives = 73/104 (70.19%), Query Frame = 2
Query: 839 YLDGASAVYTCAVCRAHLATRDHVVSECFHGHGGRAFLFERCVNVKVGRPEDRLLMTGMHVVADISCSDCGTELGWKYEEAAEKSQKYKEGKFILEKCSVTLEG 1150
YL+G +Y+C+ CR H A D ++S+ F G GRA+LF VNV +G EDRLLMTG+H VADI CS C T LGWKYE A E SQKYKEGKFI+EK + EG
Sbjct: 8 YLNGTK-IYSCSNCRCHSADHDDIISKAFQGRHGRAYLFNNAVNVTLGPKEDRLLMTGLHTVADIFCSHCQTVLGWKYEMAFETSQKYKEGKFIIEKARLLKEG 110
BLAST of mRNA_F-serratus_M_contig7.18160.1 vs. uniprot
Match: A8IZB3_CHLRE (Protein yippee-like n=5 Tax=Chlamydomonadales TaxID=3042 RepID=A8IZB3_CHLRE) HSP 1 Score: 124 bits (311), Expect = 5.410e-31 Identity = 59/104 (56.73%), Postives = 75/104 (72.12%), Query Frame = 2
Query: 839 YLDGASAVYTCAVCRAHLATRDHVVSECFHGHGGRAFLFERCVNVKVGRPEDRLLMTGMHVVADISCSDCGTELGWKYEEAAEKSQKYKEGKFILEKCSVTLEG 1150
YL G VY+CA CRAH A + ++S+ F G GRA+L +NV VG E+R+L+TG+H VADISCS CG+ LGW+YE A E+SQKYKEGK+I+EK V EG
Sbjct: 8 YLSGPR-VYSCANCRAHAADHEDIISKAFQGRHGRAYLVNSAINVTVGPKEERVLITGLHTVADISCSSCGSVLGWRYEHAFEESQKYKEGKYIIEKAKVMKEG 110 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7.18160.1 >prot_F-serratus_M_contig7.18160.1 ID=prot_F-serratus_M_contig7.18160.1|Name=mRNA_F-serratus_M_contig7.18160.1|organism=Fucus serratus male|type=polypeptide|length=377bp MAAAFSGDNGRPSRRAPSPRSRQRAALVQPPTSHEVHRGTRTLQSRLSASback to top mRNA from alignment at F-serratus_M_contig7:1467874..1470854- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7.18160.1 ID=mRNA_F-serratus_M_contig7.18160.1|Name=mRNA_F-serratus_M_contig7.18160.1|organism=Fucus serratus male|type=mRNA|length=2981bp|location=Sequence derived from alignment at F-serratus_M_contig7:1467874..1470854- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7:1467874..1470854- >mRNA_F-serratus_M_contig7.18160.1 ID=mRNA_F-serratus_M_contig7.18160.1|Name=mRNA_F-serratus_M_contig7.18160.1|organism=Fucus serratus male|type=CDS|length=2262bp|location=Sequence derived from alignment at F-serratus_M_contig7:1467874..1470854- (Fucus serratus male)back to top |