mRNA_F-serratus_M_contig7.18149.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig7.18149.1
Unique NamemRNA_F-serratus_M_contig7.18149.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig7.18149.1 vs. uniprot
Match: D7FLD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD4_ECTSI)

HSP 1 Score: 687 bits (1774), Expect = 1.500e-233
Identity = 446/725 (61.52%), Postives = 497/725 (68.55%), Query Frame = 1
Query:  169 MADTAPDDPVARAKAIALKFAAQAAAPSLPTGDDSSAAHGSTMTVAVXXXXXXXXXXXXAESELGKRKNRWGEDPQ-PAPSMPAGFGIPAALM-QATPSVKLARKKLFVPVNEHPDFNFMGVLIGPRGSSLKAMEQRTGAKIVIRGKGSQKDQSVADPESNEELHVTVEGIESAVATATEEIEGIFKNPHKALLVKSEQLRSLADMNGSGGAGGDSSNSFGASAYGPAGGEDYEVEMAVPNKMVGLIIGRGGQNIQSMQRDYNITIQIASQNEVPPGSETRPVKLKGTRQSVESCRSKINQVISDRENELAGGYLPG--------THYGPGPAPSRESNSGQHAHNHLTIPDDKVGLVIGKGGGTIKGVQSRTGAHIQIPGDPDANDRSKRTIVISAASKEAADRAMAEVQNILSADAASLGG-STAPPGSQVLYVVIPDEKVGLVIGKGGTTIKELQNRTGCRIQIPSQTDAGSHPPSRRVTLTGVGDAPHNAKRDIEMMVQDDD-RNRYGGGVVPPPHQAYGSPXXG---HYGGPPAPYGAXXXXXXXXXXXPQPQPYQPYXXXXHQPYQPVPQXXXXXXXLPQQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPSPAAXXXXXXXXXXXXXXXXXPVDMTQYHDQFWQYAAYYGEQVARDQYGAWAPPVGTPP 2298
            MAD  PDDPVARAKAIALK  A                       A             +ESELGKRKNRWGEDPQ PAPSMPAGFG+PAALM QAT  V  ARKK+ VPV EHP+FNFMGVLIGPRGSSLKAMEQRTGAKI+IRG+GS K+ S +DPE+NE++HV +EG ++AVA AT+EIE IFK+P +AL+VKSEQL++LAD+NGSG  GG S  +    AYGPAGGE+YEVEM VP+KMVGLIIGRGG NIQSMQRDY ITIQIASQN+VP  SETRPVKLKG RQSVE CRS+INQ+I+DRENEL GG++PG         HYGPG    R+S+S   A NHLTIPDDKVGLVIGKGGGTIKGVQ RTGA+IQIPG+ DANDR+ RTIVISA +K+AADRAMAEVQNILSADAAS+GG S  PPGSQVL+V+IPD+KVGLVIGKGG+TIKELQNRTGCRIQIPSQTD G++PP+RRVTLTGVG++PHNAKRDIEMMV+DD+ R  YG G            XX     YGGPPAPYGAXXXXXXXXXXX   Q          QPYQ    XXXXXXX    P    XXXXXXXX                                                                AP+P A                  VDM+QYHDQFWQYAAYYGEQVARDQYGAWAPP GTPP
Sbjct:    1 MADALPDDPVARAKAIALKLTATXXXXXXXXXXXXXXXXXPEAAPA-----------PASESELGKRKNRWGEDPQQPAPSMPAGFGLPAALMAQATAGVPTARKKIMVPVKEHPEFNFMGVLIGPRGSSLKAMEQRTGAKILIRGRGSTKEPS-SDPEANEDMHVVIEGTDAAVAVATQEIETIFKDPQRALIVKSEQLKNLADLNGSGAYGGASGGAX--XAYGPAGGEEYEVEMGVPSKMVGLIIGRGGSNIQSMQRDYQITIQIASQNDVPADSETRPVKLKGGRQSVEQCRSQINQIITDRENELQGGFIPGGVAGGGGGAHYGPG----RDSSS--QATNHLTIPDDKVGLVIGKGGGTIKGVQGRTGANIQIPGEADANDRTMRTIVISAGTKDAADRAMAEVQNILSADAASVGGGSGVPPGSQVLHVIIPDDKVGLVIGKGGSTIKELQNRTGCRIQIPSQTDPGTYPPTRRVTLTGVGESPHNAKRDIEMMVRDDENRGGYGRGXXXXXXXXXXXXXXXXXXRYGGPPAPYGAXXXXXXXXXXXXXXQ----------QPYQXXXXXXXXXXXXXPAPQYQPXXXXXXXXQAAAAP----------------------------------------------------------APAPGA------------------VDMSQYHDQFWQYAAYYGEQVARDQYGAWAPPAGTPP 619          
BLAST of mRNA_F-serratus_M_contig7.18149.1 vs. uniprot
Match: A0A6H5JDI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDI8_9PHAE)

HSP 1 Score: 642 bits (1656), Expect = 2.560e-215
Identity = 371/513 (72.32%), Postives = 419/513 (81.68%), Query Frame = 1
Query:  169 MADTAPDDPVARAKAIALKFAAQAAAPSLPTGDDSSAAHGSTMTVAVXXXXXXXXXXXXAESELGKRKNRWGEDPQ-PAPSMPAGFGIPAALM-QATPSVKLARKKLFVPVNEHPDFNFMGVLIGPRGSSLKAMEQRTGAKIVIRGKGSQKDQSVADPESNEELHVTVEGIESAVATATEEIEGIFKNPHKALLVKSEQLRSLADMNGSGGAGGDSSNSFGASAYGPAGGEDYEVEMAVPNKMVGLIIGRGGQNIQSMQRDYNITIQIASQNEVPPGSETRPVKLKGTRQSVESCRSKINQVISDRENELAGGYLPG-------THYGPGPAPSRESNSGQHAHNHLTIPDDKVGLVIGKGGGTIKGVQSRTGAHIQIPGDPDANDRSKRTIVISAASKEAADRAMAEVQNILSADAASLGG-STAPPGSQVLYVVIPDEKVGLVIGKGGTTIKELQNRTGCRIQIPSQTDAGSHPPSRRVTLTGVGDAPHNAKRDIEMMVQDDD-RNRYGGG 1674
            MAD  PDDPVARAKAI                               XXXXXXXXXXXX ESELGKRKNRWGEDPQ PAPSMPAGFG+PAALM QAT  V  ARKK+ VPV E+P+FNFMGVLIGPRGSSLKAMEQRTGAKI+IRG+GS K+ S +DPE+NE++HV +EG ++AVA AT+EIE IFK+P +AL+VKSEQL++LAD+NGSG  GG S  +    AYGPAGGE+YEVEM VP+KMVGLIIGRGG NIQSMQRDY ITIQIASQN+VP  SETRPVKLKG RQSVE CRS+INQ+ISDRENEL GG++PG       THYGPG    R+S+S   A NHLTIPDDKVGLVIGKGGGTIKGVQ RTGA+IQIPG+ DANDR+KRTIVISA +K+AADRAMAEVQNILSADAAS+GG S  PPGSQVL+V+IPD+KVGLVIGKGG+TIKELQNRTGCRIQIPSQTD G++PP+R VTLTGVG++PHNAKRDIEMMV+DD+ R  YG G
Sbjct:    1 MADALPDDPVARAKAIXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXESELGKRKNRWGEDPQQPAPSMPAGFGLPAALMAQATAGVPSARKKIMVPVKEYPEFNFMGVLIGPRGSSLKAMEQRTGAKILIRGRGSTKEPS-SDPEANEDMHVVIEGTDAAVAVATQEIETIFKDPQRALIVKSEQLKNLADLNGSGAYGGASGGAX--XAYGPAGGEEYEVEMGVPSKMVGLIIGRGGSNIQSMQRDYQITIQIASQNDVPADSETRPVKLKGGRQSVEQCRSQINQIISDRENELQGGFIPGGVSGGGGTHYGPG----RDSSS--QATNHLTIPDDKVGLVIGKGGGTIKGVQGRTGANIQIPGEADANDRTKRTIVISAGTKDAADRAMAEVQNILSADAASVGGGSGVPPGSQVLHVIIPDDKVGLVIGKGGSTIKELQNRTGCRIQIPSQTDPGTYPPTRCVTLTGVGESPHNAKRDIEMMVRDDENRGGYGRG 493          
BLAST of mRNA_F-serratus_M_contig7.18149.1 vs. uniprot
Match: A0A835YN15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN15_9STRA)

HSP 1 Score: 295 bits (754), Expect = 1.690e-83
Identity = 275/699 (39.34%), Postives = 354/699 (50.64%), Query Frame = 1
Query:  358 LGKRKNRWGEDPQPAPSMPAGFGIPAALMQATPSVKLARKKLFVPVNEHPDFNFMGVLIGPRGSSLKAMEQRTGAKIVIRGKGSQKDQSVADPESNEE-LHVTVEGIESAVATATEEIEGIFKNPHKAL-----LVKSEQLRS--LADMNGSGGAG----GDSSNSFGASAYGPAGGEDY-EVEMAVPNKMVGLIIGRGGQNIQSMQRDYNITIQIASQNEVPPGSETRPVKLKGTRQSVESCRSKINQVISDREN----ELAGGYLPGTH-------------------------YGPGPAPSRESNSGQHAHNHLTIPDDKVGLVIGKGGGTIKGVQSRTGAHIQIPGDPDANDRSKRTIVISAASKEAADRAMAEVQNILSADAASLGGSTAPPGSQVLYVVIPDEKVGLVIGKGGTTIKELQNRTGCRIQIPSQTDAGSHPPSRRVTLTGVGDAPHNAKRDIEMMVQDDDRNRYGGGVVPPPHQAYGSPXXGHYGGPPAPYGAXXXXXXXXXXXP-----QPQPY-----QPYXXXXHQPYQPVPQXXXXXXXLPQQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPSPAAXXXXXXXXXXXXXXXXXPVDMTQYHDQFWQYAAYYGEQVARDQYGAWAPPVGTPP 2298
            LGKRK+RW ++   A               A+  V   + K+ VP          GV +G  G+SLKAME+ TGAKI I GKG+       D  ++EE LHV VEG +  +ATAT+EIEG+ K P  A+     L +   L +  L     +  AG      +  + G    G AG   + E+   +PN+MVG++IGRGG+NIQ +QR+Y + IQIA   +V PG+ TRPV LKG + S+   +++++++I +R+      L GG                               YGPGP   RE  +       + IP+DKVGLVIGK GGTIKG+Q RT ++IQ+P  PD +D ++RTI I+A SK   D AM EVQN++  DA   G  T P G   + + +P+++VGL+IGK G TIKELQNR+G RIQIP Q+D G+    R V++TGVGDAP  AK ++E M+   DR +       PP  A+G    G YG   +PYG      XXXXXX      QPQPY     QP      Q Y              QQP       XXXXXXX    XXXXXXXXXXXXXXXX                                                                  VD+TQYH QFWQYAAYYGE+VAR+QYGAWAPPVGTPP
Sbjct:   54 LGKRKDRWSDNEDEANG------------HASEPVAKKQSKIVVPE---------GVGVGGLGTSLKAMEETTGAKISIHGKGA------GDGAASEEPLHVVVEGTDIEIATATKEIEGLLKQPEAAVATPAVLAEPSPLTAATLGXXXSTMAAGQFQVASTMPAVGMMPTGDAGTVAFDEMHFEIPNEMVGVVIGRGGENIQKIQREYGVNIQIAKAQDVRPGATTRPVTLKGPKHSLVPAKAEVDKLIMERQAGFAPTLGGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGPGP---REQVT-------MPIPNDKVGLVIGKQGGTIKGIQMRTSSNIQVPPQPDMDDPTRRTITIAAPSKMQIDLAMREVQNVI--DAGLTG--TGPTGGNTVILQVPNDRVGLIIGKAGATIKELQNRSGARIQIPPQSDPGTT--MRSVSITGVGDAPMRAKYEMEQMLMGFDRQQQ----QQPPQGAFGGAPPG-YGA--SPYGQPTPTPXXXXXXXXXAYGQPQPYGMPAAQPAYSAYGQQY--------------QQPDLYAAQAXXXXXXXHYQQXXXXXXXXXXXXXXXXAGG---------------------------------------------------------------VDLTQYHTQFWQYAAYYGERVAREQYGAWAPPVGTPP 625          
BLAST of mRNA_F-serratus_M_contig7.18149.1 vs. uniprot
Match: A0A835ZE80_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE80_9STRA)

HSP 1 Score: 283 bits (725), Expect = 1.870e-79
Identity = 262/773 (33.89%), Postives = 353/773 (45.67%), Query Frame = 1
Query:  199 ARAKAIALKFAAQAAAPSLPTGDDSSAAHGSTMTVAVXXXXXXXXXXXXAESELGKRKNRWGEDPQPAPSM------PAGFGIPAALMQATPSVKLARKKLFVPVNEH--PDFNFMGVLIGPRGSSLKAMEQRTGAKIVIRGKGSQKDQSVADPESNEELHVTVEGIESAVATATEEIEGIFKNPHKALLVKSEQLRSLADMNGSGGAGGDSSNSFGA-SAYGPA---GGEDY----------------EVEMAVPNKMVGLIIGRGGQNIQSMQRDYNITIQIASQNEVPPGSETRPVKLKGTRQSVESCRSKINQVISDRENELA-----------GGYLPGTHYGPGPAPSRESNSGQHAHNHLTIPDDKVGLVIGKGGGTIKGVQSRTGAHIQIPGDPDANDRSKRTIVISAASKEAADRAMAEVQNILSADAASLGGSTAPPGSQV---------LYVVI-------------------------PDEKVGLVIGKGGTTIKELQNRTGCRIQIPSQTDAGSHPPSRRVTLTGVGDAPHNAKRDIEMMVQDDDRNRYGGGVVPPPHQAYGSPXXGHYGGPPAPYGAXXXXXXXXXXXPQPQPYQPYXXXXHQPYQPVPQXXXXXXXLPQQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPSPAAXXXXXXXXXXXXXXXXXPVDMTQYHDQFWQYAAYYGEQVARDQYGAWAPPVGTPP 2298
            ARA AIA K +A  A    P G    +   ST +  +            A +ELGKRK RW E  + APS        AGFG              A K+  VP+ EH     + MG+L+GP+GS+++AM+++TGAKI IRG+GS       D +++E LHV +EG + AV++AT EI+ I  NP +A  +K +QL  LA M    G G ++S    A S YGP    GG  Y                E    +PN MVG++IGRGG+NIQ +QR++ + IQIA   ++PPG+  RP+ LKG  Q++ + ++++  +I+DR+               G Y    + G G   + E+ +       +TIP+DKVGLVIGKGG TIKG+QSRT A +QIP  PDA++ + RTI IS AS +  + A++EV++++ A    L    APPG            +YV I                         PD++VGL+IGK G TIKE+Q R G RIQIP   D G+    R V++TG GDA +  K D+E ++ +D                  +P  G  GGPP                     +Q  XXXX    QP+PQ           P                                                        X    XXXXXXXX        PSP                            QFWQYAAYYGE+VAR+QYGAWAPP GTPP
Sbjct:    8 ARAAAIAAKLSASLAGGGAPVGASMMS---STPSFGLE-----------ASTELGKRKARWSEQVE-APSSYGNGGGGAGFG--------------ASKRNKVPIPEHLARGGSIMGMLLGPKGSTIRAMQEKTGAKIQIRGRGSNPKPG-DDHDADEPLHVMIEGSDQAVSSATREIQSILHNPEEANRLKHQQLTDLASMRS--GMGMNTSGMPSANSPYGPPSNLGGAQYSGSSLMGGASNGGGVDEAAFEIPNAMVGVVIGRGGENIQRIQREFGVNIQIAKSTDIPPGAVARPITLKGPPQALAAAKAEVMNLINDRQXXXXXXXXXXXXXXXGTYXXXXNAGLGSYSANETIT-------MTIPNDKVGLVIGKGGATIKGIQSRTQASVQIPPTPDADNPACRTITISGASTQQVEIAVSEVRSVIDAGVQGL----APPGGSATIVQYYAAGIYVFINVCXXXXXXXXXXXXXXXXXXXXXVPDDRVGLIIGKAGNTIKEMQARHGVRIQIPPTADPGTR--YRSVSITGPGDAANRCKYDVEKLLANDMAQ---------------NPRQGDRGGPP---------------------FQQXXXXXXXXQQPMPQYGAPPPGYAPSP------------------------------------------------------YLXPMAPXXXXXXXXIAQAIVSVPSPLQQCSGHRIR------------------QFWQYAAYYGERVAREQYGAWAPPAGTPP 627          
BLAST of mRNA_F-serratus_M_contig7.18149.1 vs. uniprot
Match: D0N146_PHYIT (Uncharacterized protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0N146_PHYIT)

HSP 1 Score: 266 bits (680), Expect = 3.010e-74
Identity = 181/493 (36.71%), Postives = 265/493 (53.75%), Query Frame = 1
Query:  190 DPVARAKAIALKFAAQAAAPSLPTGDDSSAAHGSTMTVAVXXXXXXXXXXXXAESELGKRKNRWGEDPQPAPSMPAGFGIPAALMQATPSVKLARKKLFVPVNEHPDFNFMGVLIGPRGSSLKAMEQRTGAKIVIRGKGSQKDQSVADPESNEELHVTVEG-IESAVATATEEIEGIFKNPHKALLVKSEQLRSLADMNGSGGAGGDSSNSFGASAYGPAG-GEDYEVEMAVPNKMVGLIIGRGGQNIQSMQRDYNITIQIASQNEVPPGSETRPVKLKGTRQSVESCRSKINQVISDRE-NELAGGYLPG------THYGPGPAPSRESNSGQHAHNHLTIPDDKVGLVIGKGGGTIKGVQSRTGAHIQIPGDPDANDRSKRTIVISAASKEAADRAMAEVQNILSADAASLGGSTAPPGSQVLYVVIPDEKVGLVIGKGGTTIKELQNRTGCRIQIPSQTDAGSHPPSRRVTLTGVGDAPHNAKRDIEMMV 1641
            DPVARA+ IA + AA A    +P GD                              LGKRK+RW  D         G G            +  RKK+++PV+++PD NFMG+LIGPRGS+ K ME  +GA+I+IRGKGS KD +  DP+ NEELHV +    + AVA A   +E I  NP +A+ +K EQLR +A++NG+       S+S G + YGP         +M VP ++VG IIGRGG+ I+ +Q      IQI  + E  P +  R V + G + ++E  +  I  +I +R+ N+ AGG+           YG G  P    +        + +P+++VGL+IG+GG TIK +Q RTG  + IP  PD N    R I I   + EA + A  E+Q+++S +     G  A  G Q +Y+ +P+++VG++IGK G TIK +Q+R   RIQIP   D GS+PP R +++ G       AK +++M++
Sbjct:    3 DPVARAREIAARLAAAA----IPGGD-----------------------------ALGKRKSRWEGDADGGMRPAPGMG------------EKKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGARILIRGKGSSKDPT-GDPDENEELHVLITADTDEAVAKAQSAVEEILFNPQQAMKLKQEQLRKVAELNGTLNENYSESHSIGQNNYGPGNDAHSSSYDMKVPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTADRFVNIAGNQDTLELAQKLIQNLIDERQQNQGAGGFRERDDRDRMARYG-GINPDGSDSV------EIMVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPNHPEMRLITIRG-TMEAKEAAKFEIQSMVSDEPGQRHGYGATSG-QTIYMQVPNDRVGVIIGKRGETIKGIQDRHAVRIQIPQVADEGSNPPVRTISIQGPAPNLAGAKEEVDMVI 440          
BLAST of mRNA_F-serratus_M_contig7.18149.1 vs. uniprot
Match: A0A3F2RPH9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RPH9_9STRA)

HSP 1 Score: 261 bits (666), Expect = 6.430e-73
Identity = 180/501 (35.93%), Postives = 266/501 (53.09%), Query Frame = 1
Query:  190 DPVARAKAIALKFAAQAAAPSLPTGDDSSAAHGSTMTVAVXXXXXXXXXXXXAESELGKRKNRWGEDPQPAPSMPAGFGIPAALMQATPSVKLARKKLFVPVNEHPDFNFMGVLIGPRGSSLKAMEQRTGAKIVIRGKGSQKDQSVADPESNEELHVTVEG-IESAVATATEEIEGIFKNPHKALLVKSEQLRSLADMNGS-----GG--AGGDSSNSFGASAYGPAGGEDYEVEMAVPNKMVGLIIGRGGQNIQSMQRDYNITIQIASQNEVPPGSETRPVKLKGTRQSVESCRSKINQVISDRENELAGGYLPGTHYGPGPAPSRESNSGQHAHN-------HLTIPDDKVGLVIGKGGGTIKGVQSRTGAHIQIPGDPDANDRSKRTIVISAASKEAADRAMAEVQNILSADAASLG--GSTAPPGSQVLYVVIPDEKVGLVIGKGGTTIKELQNRTGCRIQIPSQTDAGSHPPSRRVTLTGVGDAPHNAKRDIEMMV 1641
            DPVARA+ IA + AAQA    +P G+                              LGKR +RW  D         G G            +  RKK+++PV+++PD NFMG+LIGPRGS+ K ME  +GA+I+IRGKGS KD +  DP+ NEELHV +    + +VA A   +E I  NP +A+ +K EQLR +A++NG+     GG  +GGD+  S GA  YGP        +M VP  +VG IIGRGG+ I+ +Q      IQI  + E  P +  R V + G ++S++  +  I  ++ +R+    GG       G      R+  +     N        L +P+++VGL+IG+GG TIK +Q RTG  + IP  PD N    R I I   + EA + A  E+Q++++ +       G TA    Q +Y+ +P+++VG++IGK G TIK +Q+R   RIQIP   D GS+PP R +++ G       AK +++M++
Sbjct:    2 DPVARAREIAARLAAQA----IPGGN-----------------------------VLGKRSSRWEGDADGGVRPAPGLG------------EKKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGARILIRGKGSSKDPT-GDPDENEELHVLITADTDESVAKAQSAVEDILFNPQQAMKLKQEQLRKVAELNGTLNENYGGPKSGGDNGQS-GAQHYGPGSDNQTSYDMKVPRDLVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRFVNITGNQESLDLAQKLIQNLLDERQQNQTGGS------GLRERDDRDRMARYGGINPDGTESVELLVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPNHPDMRLITIRG-TMEAKEAAKFEIQSMINEEPGQRQTYGMTA---GQTIYMQVPNDRVGVIIGKRGETIKGIQDRHAVRIQIPQVADPGSNPPVRTISIQGPPQNLTGAKEEVDMVI 445          
BLAST of mRNA_F-serratus_M_contig7.18149.1 vs. uniprot
Match: K3X5D6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5D6_GLOUD)

HSP 1 Score: 263 bits (673), Expect = 1.880e-72
Identity = 181/502 (36.06%), Postives = 270/502 (53.78%), Query Frame = 1
Query:  190 DPVARAKAIALKFAAQAAAPSLPTGDDSSAAHGSTMTVAVXXXXXXXXXXXXAESELGKRKNRWGEDPQPAPSMPA-GFGIPAALMQATPSVKLARKKLFVPVNEHPDFNFMGVLIGPRGSSLKAMEQRTGAKIVIRGKGSQKDQSVADPESNEELHVTVEG-IESAVATATEEIEGIFKNPHKALLVKSEQLRSLADMNGS------GGAGGDSSNSFGASAYGPAGGEDYEVEMAVPNKMVGLIIGRGGQNIQSMQRDYNITIQIASQNEVPPGSETRPVKLKGTRQSVESCRSKINQVISDRENELAGGYLPGTHYGPGPAPSRESNSGQHAHN----------HLTIPDDKVGLVIGKGGGTIKGVQSRTGAHIQIPGDPDANDRSKRTIVISAASKEAADRAMAEVQNILSADAASLGGSTAPPGSQVLYVVIPDEKVGLVIGKGGTTIKELQNRTGCRIQIPSQTDAGSHPPSRRVTLTGVGDAPHNAKRDIEMMV 1641
            DPVARA+AIA + AA A    +P+                                LGKRK+RW +D     + PA GF            V+  RKK+++PV+++PD NFMG+LIGPRGS+ K ME  +GAKI+IRGKGS KD +  DP+ NEELHV +    + A+A A   +E I  NP +A+ +K EQLR +A++NG+         GG+ S  +G S     G +D   EM VP  +VG IIGRGG+ I+ +Q      IQI  + E   G+  R V + GT ++++  ++ I  ++ +R N    G   G+  G G    R+ N     +            L IP+++VGL+IG+ G TIK +Q RTG+ + IP  PD N+ S R I I   + +A + A  E+  I++ D            S + Y+ +P+++VG+VIGK G TI+ +Q+R G RIQIP   D GS+P  R +++ G  ++   AK +++M++
Sbjct:    2 DPVARARAIAARLAATA----IPS------------------------------DALGKRKSRWEDDADGGAARPAPGF------------VEKKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGAKILIRGKGSSKDPT-GDPDENEELHVLITADTDEAIAKAQSAVEDILFNPQQAMKLKQEQLRKVAELNGTLNENYGNRDGGEPSGHYGPSGSADGGEKDATTEMQVPRDLVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAQGTPHRFVSISGTEEALQKAQTMIQNLVDERTN--GSGPRSGSGSGGG-FRERDDNDRMARYGGVNPDGSESMELHIPNERVGLIIGRAGATIKSIQQRTGSSVTIPQTPDPNNPSMRLITIRG-TIQAKEAAKQEILAIINDDHGGRXXXXXXXXSTI-YMQVPNDRVGVVIGKRGETIRGIQDRHGVRIQIPQVPDPGSNPSVRTISIEGPVNSLQPAKEEVDMVI 451          
BLAST of mRNA_F-serratus_M_contig7.18149.1 vs. uniprot
Match: A0A485LAJ5_9STRA (Aste57867_18604 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAJ5_9STRA)

HSP 1 Score: 262 bits (669), Expect = 3.130e-72
Identity = 186/504 (36.90%), Postives = 273/504 (54.17%), Query Frame = 1
Query:  181 APDDPVARAKAIALKFAAQAAAPSLPTGDDSSAAHGSTMTVAVXXXXXXXXXXXXAESELGKRKNRWGEDPQPAPSMPAGFGIPAALMQATPSVKLARKKLFVPVNEHPDFNFMGVLIGPRGSSLKAMEQRTGAKIVIRGKGSQKDQSVADPESNEELHVTVEG-IESAVATATEEIEGIFKNPHKALLVKSEQLRSLADMNGSGGAGGDSSNSFGASAYGPA---GGEDYE-VEMAVPNKMVGLIIGRGGQNIQSMQRDYNITIQIASQNEVPPGSETRPVKLKGTRQSVESCRSKINQVISDRENELAGGYLPGTHYGPGPAPSRESNSGQHAHNHLTIPDDKVGLVIGKGGGTIKGVQSRTGAHIQIPGDPDANDRSKRTIVISAASKEAADRAMAEVQNILSADAASLGGSTAPPGSQVLYVVIPDEKVGLVIGKGGTTIKELQNRTGCRIQIPSQTDAGSHPPSRRVTLTGVG-DAPHNAKRDIEMMVQDDDRNRYGGG 1674
            A +DPVARA+AIA + AA  A P +                                S LGKRK+RW E            G P  +          RKK+++PV+++PD NFMG+LIGPRGS+ K ME  +G+KI+IRGKGS K+ +  D + NE+LHV +    ++ +A A  E+E I  NP +A+ +K EQLR +A+ N          NS+    YGP    GG+D+  + M VP  +VGLIIG+GG+ I+ +Q      IQ+A +NEV   +  R V   GT   +E  +  I  ++SDR   + GG                   GQ     + +P+DKVGL+IG+ G T+KGVQ RTGA I IP   D+++   RT++++  S EA ++A  E+ N+L  D   L     P G+  +Y+ IP+E+VG+VIG+GG+T+K +Q+R+  ++QIP+  D GS P  R + ++G   DA   AK +I+ ++  DD    GGG
Sbjct:    2 ADNDPVARARAIAARLAA--AVPDM--------------------------------SVLGKRKSRWEE------------GDPTGMDGKK------RKKVYIPVDKYPDINFMGLLIGPRGSNQKRMETLSGSKILIRGKGSSKEPT-GDADENEDLHVLITADTDAQIARAQREVEDILFNPDQAMKLKQEQLRQVAENN----------NSYDGH-YGPGSGGGGDDHTTLNMPVPRNLVGLIIGKGGETIRELQGKSGAHIQVARENEVNVNATERTVMCSGTPAQLEMAKQLITDLLSDR---MHGGQF----------------IGQGESMKMPVPNDKVGLIIGRQGATVKGVQQRTGASIVIPPAADSDNPGYRTLIVTG-SHEAREKARVEI-NMLVNDQHQL----IPSGANTIYMQIPNERVGIVIGRGGSTVKAIQDRSNVKVQIPNTIDPGSMPEVRTICISGSSMDAIAMAKAEIDAILMGDDSGSGGGG 416          
BLAST of mRNA_F-serratus_M_contig7.18149.1 vs. uniprot
Match: A0A6G0WVZ7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WVZ7_9STRA)

HSP 1 Score: 260 bits (665), Expect = 3.420e-72
Identity = 170/440 (38.64%), Postives = 257/440 (58.41%), Query Frame = 1
Query:  352 SELGKRKNRWGEDPQPAPSMPAGFGIPAALMQATPSVKLARKKLFVPVNEHPDFNFMGVLIGPRGSSLKAMEQRTGAKIVIRGKGSQKDQSVADPESNEELHVTVEG-IESAVATATEEIEGIFKNPHKALLVKSEQLRSLADMNGSGGAGGDSSNSFGASAYGPAGGEDYE-VEMAVPNKMVGLIIGRGGQNIQSMQRDYNITIQIASQNEVPPGSETRPVKLKGTRQSVESCRSKINQVISDRENELAGGYLPGTHYGPGPAPSRESNSGQHAHNHLTIPDDKVGLVIGKGGGTIKGVQSRTGAHIQIPGDPDANDRSKRTIVISAASKEAADRAMAEVQNILSADAASLGGSTAPPGSQVLYVVIPDEKVGLVIGKGGTTIKELQNRTGCRIQIPSQTDAGSHPPSRRVTLTG-VGDAPHNAKRDIEMMVQDDDRNR 1662
            S LGKRK+RW EDP              ++M         RKK+++PV ++PD NF+G+LIGPRGS+ K ME  +GA+I+IRGKG+ K+ + A P+ NE+LHV + G  +  +A A  E+E I  NP KA+ +K EQLR +A+          +SNS+    YGP GG+D+  + + VP  +VGLIIG+GG+ I+ +Q      IQ+A + E+   +  R V   G+   +E  +  IN ++SDR   + GG   G         S ES         + +P+DKVGL+IG+ G T+KGVQ RTGA I IP   D+++   RT+++S  S EA ++A  E+ N+L  D   L     P G+  +Y+ IP+E+VG+VIG+GG T+K +Q+RT  +IQIP+  D GS P  R + ++G   ++   AK +++ ++ +D   R
Sbjct:   25 SVLGKRKSRWEEDP-------------LSMMDGK-----KRKKVYIPVEKYPDINFLGLLIGPRGSNQKRMETLSGARILIRGKGASKELTGA-PDENEDLHVLIAGDTDEQIARAQHEVEDILFNPEKAMKLKQEQLRQVAE----------NSNSYDGH-YGPGGGDDHSTLNIPVPRNLVGLIIGKGGETIRELQGKSGCHIQVARETEMNSEATERTVMCSGSPAQLEMAKQLINDLLSDR---MHGGQFIG---------SGESMK-------MPVPNDKVGLIIGRQGATVKGVQQRTGASIVIPPAADSDNPGFRTLIVSG-SHEAREKARIEI-NMLINDQHQL----IPTGAHTIYMQIPNERVGIVIGRGGATVKAIQDRTNVKIQIPNSIDPGSIPEVRTICISGPTMESIAMAKAEVDAILLEDTGGR 409          
BLAST of mRNA_F-serratus_M_contig7.18149.1 vs. uniprot
Match: A0A3R7HAU1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HAU1_9STRA)

HSP 1 Score: 263 bits (672), Expect = 4.010e-72
Identity = 185/513 (36.06%), Postives = 272/513 (53.02%), Query Frame = 1
Query:  190 DPVARAKAIALKFAAQAAAPSLPTGDDSSAAHGSTMTVAVXXXXXXXXXXXXAESELGKRKNRWGEDPQPAPSMPAGFGIPAALMQATPSVKLARKKLFVPVNEHPDFNFMGVLIGPRGSSLKAMEQRTGAKIVIRGKGSQKDQSVADPESNEELHVTVEG-IESAVATATEEIEGIFKNPHKALLVKSEQLRSLADMNGS-----GG--AGGDSSNSFGASAYGPAGGEDYEVEMAVPNKMVGLIIGRGGQNIQSMQRDYNITIQIASQNEVPPGSETRPVKLKGTRQSVESCRSKINQVISDRENELAGGYLPGTHYGPGPAPSRESNSGQHAHN-------HLTIPDDKVGLVIGKGGGTIKGVQSRTGAHIQIPGDPDANDRSKRTIVISAASKEAADRAMAEVQNILSADAASLG--GSTAPPGSQVLYVVIPDEKVGLVIGKGGTTIKELQNRTGCRIQIPSQTDAGSHPPSRRVTLTGVGDAPHNAKRDIEMMV-QDDDRNRYGGG 1674
            DPVARA+ IA + AAQA    +P G+                              LGKR +RW  D         G G            +  RKK+++PV+++PD NFMG+LIGPRGS+ K ME  +GA+I+IRGKGS KD +  DP+ NEELHV +    + +VA A   +E I  NP +A+ +K EQLR +A++NG+     GG  +GGD+  S GA  YGP        +M VP  +VG IIGRGG+ I+ +Q      IQI  + E  P +  R V + G ++S++  +  I  ++ +R+    GG       G      R+  +     N        L +P+++VGL+IG+GG TIK +Q RTG  + IP  PD N    R I I   + EA + A  E+Q++++ +       G TA    Q +Y+ +P+++VG++IGK G TIK +Q+R   RIQIP   D GS+PP R +++ G       AK +++M++ Q    + YGGG
Sbjct:    2 DPVARAREIAARLAAQA----IPGGN-----------------------------VLGKRSSRWEGDADGGVRPAPGLG------------EKKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGARILIRGKGSSKDPT-GDPDENEELHVLITADTDESVAKAQSAVEDILFNPQQAMKLKQEQLRKVAELNGTLNDNYGGPKSGGDNGQS-GAQHYGPGSDNQTSYDMKVPRDLVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRFVNITGNQESLDLAQKLIQNLLDERQQNQTGGS------GLRERDDRDRMARYGGINPDGTESVELLVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPNHPDMRLITIRG-TMEAKEAAKFEIQSMINEEPGQRQTYGMTA---GQTIYMQVPNDRVGVIIGKRGETIKGIQDRHAVRIQIPQVADPGSNPPVRTISIQGPPQNLTGAKEEVDMVILQGAGTHGYGGG 457          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLD4_ECTSI1.500e-23361.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDI8_9PHAE2.560e-21572.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YN15_9STRA1.690e-8339.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZE80_9STRA1.870e-7933.89Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D0N146_PHYIT3.010e-7436.71Uncharacterized protein n=3 Tax=Phytophthora infes... [more]
A0A3F2RPH9_9STRA6.430e-7335.93Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
K3X5D6_GLOUD1.880e-7236.06Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A485LAJ5_9STRA3.130e-7236.90Aste57867_18604 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0WVZ7_9STRA3.420e-7238.64Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A3R7HAU1_9STRA4.010e-7236.06Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7contigF-serratus_M_contig7:1235674..1240947 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score693.3
Seed ortholog evalue1.2e-196
Seed eggNOG ortholog2880.D7FLD4
KEGG koko:K13095,ko:K13210
Hectar predicted targeting categoryother localisation
EggNOG free text desc.pre-mRNA branch point binding
EggNOG OGsCOG5176@1,KOG0119@2759,KOG1676@1,KOG1676@2759
Ec32 ortholog descriptionK Homology domain, type 1
Ec32 orthologEc-12_007740.1
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03019,ko03041
Exons6
Model size3333
Cds size2187
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7.18149.1prot_F-serratus_M_contig7.18149.1Fucus serratus malepolypeptideF-serratus_M_contig7 1235842..1239628 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932144.701757-UTR-F-serratus_M_contig7:1235673..12358411622932144.701757-UTR-F-serratus_M_contig7:1235673..1235841Fucus serratus maleUTRF-serratus_M_contig7 1235674..1235841 +
1690964169.5552924-UTR-F-serratus_M_contig7:1235673..12358411690964169.5552924-UTR-F-serratus_M_contig7:1235673..1235841Fucus serratus maleUTRF-serratus_M_contig7 1235674..1235841 +
1622932144.8174067-UTR-F-serratus_M_contig7:1239628..12396631622932144.8174067-UTR-F-serratus_M_contig7:1239628..1239663Fucus serratus maleUTRF-serratus_M_contig7 1239629..1239663 +
1690964169.616464-UTR-F-serratus_M_contig7:1239628..12396631690964169.616464-UTR-F-serratus_M_contig7:1239628..1239663Fucus serratus maleUTRF-serratus_M_contig7 1239629..1239663 +
1622932144.8374424-UTR-F-serratus_M_contig7:1240004..12409471622932144.8374424-UTR-F-serratus_M_contig7:1240004..1240947Fucus serratus maleUTRF-serratus_M_contig7 1240005..1240947 +
1690964169.6281643-UTR-F-serratus_M_contig7:1240004..12409471690964169.6281643-UTR-F-serratus_M_contig7:1240004..1240947Fucus serratus maleUTRF-serratus_M_contig7 1240005..1240947 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932144.7186337-CDS-F-serratus_M_contig7:1235841..12360281622932144.7186337-CDS-F-serratus_M_contig7:1235841..1236028Fucus serratus maleCDSF-serratus_M_contig7 1235842..1236028 +
1690964169.5666876-CDS-F-serratus_M_contig7:1235841..12360281690964169.5666876-CDS-F-serratus_M_contig7:1235841..1236028Fucus serratus maleCDSF-serratus_M_contig7 1235842..1236028 +
1622932144.7355018-CDS-F-serratus_M_contig7:1236405..12375111622932144.7355018-CDS-F-serratus_M_contig7:1236405..1237511Fucus serratus maleCDSF-serratus_M_contig7 1236406..1237511 +
1690964169.5758245-CDS-F-serratus_M_contig7:1236405..12375111690964169.5758245-CDS-F-serratus_M_contig7:1236405..1237511Fucus serratus maleCDSF-serratus_M_contig7 1236406..1237511 +
1622932144.7612286-CDS-F-serratus_M_contig7:1238145..12385681622932144.7612286-CDS-F-serratus_M_contig7:1238145..1238568Fucus serratus maleCDSF-serratus_M_contig7 1238146..1238568 +
1690964169.5848517-CDS-F-serratus_M_contig7:1238145..12385681690964169.5848517-CDS-F-serratus_M_contig7:1238145..1238568Fucus serratus maleCDSF-serratus_M_contig7 1238146..1238568 +
1622932144.781834-CDS-F-serratus_M_contig7:1238898..12392251622932144.781834-CDS-F-serratus_M_contig7:1238898..1239225Fucus serratus maleCDSF-serratus_M_contig7 1238899..1239225 +
1690964169.5983691-CDS-F-serratus_M_contig7:1238898..12392251690964169.5983691-CDS-F-serratus_M_contig7:1238898..1239225Fucus serratus maleCDSF-serratus_M_contig7 1238899..1239225 +
1622932144.800508-CDS-F-serratus_M_contig7:1239484..12396281622932144.800508-CDS-F-serratus_M_contig7:1239484..1239628Fucus serratus maleCDSF-serratus_M_contig7 1239485..1239628 +
1690964169.6074896-CDS-F-serratus_M_contig7:1239484..12396281690964169.6074896-CDS-F-serratus_M_contig7:1239484..1239628Fucus serratus maleCDSF-serratus_M_contig7 1239485..1239628 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig7.18149.1

>prot_F-serratus_M_contig7.18149.1 ID=prot_F-serratus_M_contig7.18149.1|Name=mRNA_F-serratus_M_contig7.18149.1|organism=Fucus serratus male|type=polypeptide|length=729bp
MADTAPDDPVARAKAIALKFAAQAAAPSLPTGDDSSAAHGSTMTVAVAMN
SATPSPAPAAESELGKRKNRWGEDPQPAPSMPAGFGIPAALMQATPSVKL
ARKKLFVPVNEHPDFNFMGVLIGPRGSSLKAMEQRTGAKIVIRGKGSQKD
QSVADPESNEELHVTVEGIESAVATATEEIEGIFKNPHKALLVKSEQLRS
LADMNGSGGAGGDSSNSFGASAYGPAGGEDYEVEMAVPNKMVGLIIGRGG
QNIQSMQRDYNITIQIASQNEVPPGSETRPVKLKGTRQSVESCRSKINQV
ISDRENELAGGYLPGTHYGPGPAPSRESNSGQHAHNHLTIPDDKVGLVIG
KGGGTIKGVQSRTGAHIQIPGDPDANDRSKRTIVISAASKEAADRAMAEV
QNILSADAASLGGSTAPPGSQVLYVVIPDEKVGLVIGKGGTTIKELQNRT
GCRIQIPSQTDAGSHPPSRRVTLTGVGDAPHNAKRDIEMMVQDDDRNRYG
GGVVPPPHQAYGSPPPGHYGGPPAPYGAPPPQGYYGAPPPQPQPYQPYGM
PPHQPYQPVPQYQPYGQPLPQQPAYPQQPLQYQPLPQMAPAPAVPEQAPA
PGQMQQPAQQQQQSAQQQPTQQQQSAQQQQQQQQQQQPTQQQQYYQQQQA
PSPAAPAPAPQPAAAASSPAPGPVDMTQYHDQFWQYAAYYGEQVARDQYG
AWAPPVGTPPPPGVTIPPPGQANPPPQA*
back to top

mRNA from alignment at F-serratus_M_contig7:1235674..1240947+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig7.18149.1 ID=mRNA_F-serratus_M_contig7.18149.1|Name=mRNA_F-serratus_M_contig7.18149.1|organism=Fucus serratus male|type=mRNA|length=5274bp|location=Sequence derived from alignment at F-serratus_M_contig7:1235674..1240947+ (Fucus serratus male)
CACAATTTTGTTGGTGGTGATTGAGTTACTTAAAATACGTACTTGTATTC TCTACGTGTCTCTATAGACAGACTTTCTGGAGGGTGGGCAATCACTGAAC AGGCAGAAAAGCTGCACACATCGCGCGAAGGAGCCGATATTAATAAGTCT TGGGAAGTAGCGAGAACTATGGCGGATACTGCCCCTGATGATCCCGTGGC GCGTGCTAAGGCAATCGCTCTAAAATTCGCTGCCCAAGCAGCTGCGCCTT CTCTACCAACCGGAGATGACTCTTCTGCAGCACACGGGTCGACAATGACT GTGGCTGTGGCGATGAATTCCGCAACGCCCTCTCCTGCTCCAGCCGCTGA ATCAGGTGCGTTTAATGAGCGACTCTTATTCCGGACCTCTCAATCTTTCC CTCTCTCGTCGTAGGGTTGGCTCTCATAGCCAGGGAAAAGGTTTTCGGGA TTCGAAATATAAACAGCCCTGAGACCCTGATTTCTCCCCTTGTATTCCAA GTACTTAATTTCAGTAGAACCAATCGATTCATGGCTGGCTGTTGCCCGTT CGCACTCTTGAACCCGAAGCTTTACTGATTACCTGTAGTGCTTGATGCCC CACGACGTCGATGACTCACGTCCCGCTGATTGAATTATTTCAAGTCCCCC ACTTCCTTTGTTTTCCCCCGCGAATCTTTCGACCATGGAACTGCCGATGA TGATGTGGTGGCTATTTGCGTGGTGATTCAAGAACTTGGAAAGCGCAAAA ACAGGTGGGGGGAGGACCCTCAGCCCGCTCCTTCCATGCCGGCTGGATTT GGTATCCCTGCGGCGCTCATGCAGGCCACTCCAAGCGTAAAATTAGCTCG CAAGAAGTTGTTCGTGCCCGTGAACGAGCATCCGGATTTCAATTTTATGG GCGTACTGATAGGCCCCCGCGGAAGCTCGCTCAAAGCGATGGAGCAGCGC ACGGGCGCCAAAATAGTAATTCGTGGTAAGGGGAGCCAGAAGGATCAAAG TGTCGCCGACCCGGAGTCTAACGAGGAGCTGCACGTGACTGTCGAAGGCA TCGAGTCGGCTGTCGCCACCGCCACTGAGGAGATCGAGGGTATCTTTAAG AATCCTCACAAGGCCTTGTTAGTAAAGAGCGAACAGCTCAGGAGCCTCGC GGACATGAACGGGTCTGGCGGTGCTGGCGGTGACAGTAGTAACAGCTTCG GCGCGAGCGCGTACGGTCCCGCCGGGGGCGAGGACTATGAGGTCGAGATG GCGGTTCCAAACAAAATGGTGGGGTTGATTATCGGGCGTGGTGGACAGAA CATCCAGTCCATGCAGCGAGACTATAATATCACCATCCAGATCGCCAGTC AGAACGAGGTGCCTCCAGGGTCGGAGACTCGTCCGGTCAAGCTCAAGGGA ACCCGCCAGTCGGTCGAGTCCTGCCGATCGAAGATCAACCAGGTCATCTC AGACCGAGAAAACGAGCTCGCGGGCGGCTACCTGCCCGGTACGCACTATG GCCCCGGCCCCGCTCCCAGTCGTGAGAGCAACAGTGGGCAACATGCTCAC AACCACTTAACGATTCCAGATGACAAGGTTGGGCTTGTGATTGGCAAAGG CGGCGGGACCATCAAGGGCGTGCAATCTCGAACTGGCGCGCACATTCAAA TCCCGGGGGACCCAGACGCGAACGACCGCTCGAAGCGCACGATCGTGATC TCGGCAGCGTCAAAGGAAGCCGCCGACCGCGCTATGGCTGAAGTGCAGAA TATCCTTAGCGCCGATGCTGCGTCTTTGGGGGGTTCTACGGCACCGCCCG GCTCGCAAGTTCTTTACGTCGTCATCCCTGATGAAAAGGTATCGATCGTC CTACAGCAGTAGAGACAGACATCATTACTATCAACACGCAGTTTTTGTAC CTGGGTACCTGGTATATGACAATGATTGAAGGTTGTAATATTTTAAGTCC GGTAGCGTCTGAGGTGAACCTTTCAGGGGTCCCGCTACTGACGGTCCTAT TGTTGCTATCCCATCTCACCCGATGGTCCTTTCCACAGTAGTGGATATCA TCTTCGACGTACAACGTAGTCACTGTCTGCACGGTGAAGGTGAGAGGTCG ATGTACTCTGTTACTGTCGTGTACTGGGTGTTGGGCTAGACACCCGGAAT CGGCGAAGTTGATAAGAGTGTCTTGTTGGCCAGTTCGTTCGCCGTTCCGC ACTGTTTGTGCAAAACTAATGCTTGGAATTTTCTCTGCTCATAAAACCAA AAAATACCAGCAAACGTTTTCTCTACAACAAACCCCATCGTTCGTACAAG TACACAGCAATGTACCCTGTTTTGATTTCATGTCAGCACCCCCCTCAACC CCTACACTACAACATTTGCATTTTTACTAATACTACAGCTGCACTCTGAA TCTCATCGTGTTGCATCATGAATGGATGTCATGGGACATTTCCGCCGTGC ACGAACCATCGTGTTGCAACAGGTTGGGCTGGTTATTGGCAAGGGCGGGA CGACCATCAAGGAACTTCAAAACCGCACGGGCTGTCGCATCCAAATTCCG TCTCAGACAGATGCTGGTTCTCACCCACCCTCGCGCCGCGTGACCCTGAC TGGTGTGGGTGACGCCCCCCACAACGCCAAGCGTGACATAGAGATGATGG TTCAAGACGACGACCGCAACCGCTACGGAGGTGGCGTTGTCCCTCCTCCC CACCAGGCATATGGATCCCCGCCCCCCGGACACTACGGCGGCCCGCCCGC GCCCTACGGAGCTCCACCTCCACAAGGTTACTACGGCGCCCCCCCCCCTC AGCCGCAGCCATACCAACCTTACGGGATGCCGCCGCATCAGCCATACCAG CCGGTGCCTCAGTACCAGCCTTACGGGCAGCCACTGCCTCAGCAGGTACG GAAGTCCTTGATACTTCGACTCGTCAGGCGGGATTTGCGACGTTAGAAGG ATCTTTGACGCCCCGAAATTGCCTCGCTATTGTGTGTTTCGAGCACGTTT TGACCCGAGGACTTGCTCCCCCGTTCGCCCGTTATTCACCTGCCGTAGGC AAACAAGGATAGCAGTTAAACTCATCATTTACCTCTTTTGTCGTTGCATT TTGACCGGACAAAGGCCCCACCTGCGCTGCCCTGCCCTGCCCTGAACTGA CGAAGCACAACGCTCGGACGTTTTGATATCTGAAACGTGTCTCCGTAATT TTCACATGTCGATGTGTTCTTGCAGCCTGCCTACCCGCAACAGCCACTCC AATACCAGCCGTTGCCGCAGATGGCGCCGGCCCCCGCAGTACCCGAGCAG GCCCCAGCACCGGGACAAATGCAGCAGCCTGCTCAGCAGCAGCAACAGTC GGCTCAGCAGCAGCCTACGCAGCAGCAGCAGTCTGCCCAGCAGCAACAGC AACAGCAGCAGCAGCAGCAGCCCACTCAGCAACAACAGTACTATCAGCAG CAACAGGCCCCTTCTCCGGCCGCCCCCGCACCCGCTCCTCAGCCCGCTGC TGCTGCCTCCAGCCCGGCCCCTGGTCCCGTGGACATGACTCAGTACCACG ATGTGAGTACGCGCGTGAAGTATTTCGGGAAGTCAGACGTTGTAATATTC TACCACGAGGCTTGAGTCAGGTTTTCAGTGGACGTCGACCGCGCCGTCCG ACGTGCTCCCCCTGCCATGTCAAAACTGTTTATTAATAGCTTGGCGGGGA GTGTGAAAGTTGCAGGCAATTCGTGTTGTGTCGCATCGAATAAACCATGT ACTCGGACTTGTTGCTGCTTTTTTCCCCGTTACTCTGTTCCACCGCCCTC GGATTTGACAGCAATTCTGGCAGTATGCGGCGTACTACGGAGAACAAGTG GCTCGCGACCAATACGGTGCTTGGGCTCCGCCCGTGGGCACCCCTCCCCC TCCCGGCGTTACCATCCCTCCCCCCGGTCAGGCTAACCCCCCACCGCAAG CTTGAGAGGCAACCCACATGTCGCGCCATTTATTTTCAAGGTATGTGGAT TCGAAGAAGGCACCAGTCGTTAACGCTGACTTGGTGACTGGCGTTAACTC TTTGATTCCCTCAGAAGCTTCGGCCGGCGCGGTGGGTCTCACCGGCCGGT GCGATCTGACCCCTCCCCCCCCCCCCTTCTCTGCCCCCCGGCCTATGTGG TCCGCGGTGTTTGAGCGTTCGTTAGGTCGAGCGAGCGTTCCGCTGTGCGT GCCTCGAGTAACCTGTGGTTCCCTTCTCGCTTGCGTTCTCGCCTTGCCTC GCCTCGCTTGCCCTCCATGTTCGCTTGCTCCCACGCATTTCTTTCGCGAT ATCATCACCGCATGATTCGGTTCATCGTCAGACTTGAAGAAATGCACTAC GCGGCCGCTTTCTAAGCGTGGTGCAATGATGAAGTATGCTGCCGCATGTA CCACAACGCTCTACACGCGCATTGAGAGAGTGACGCATTCACGGCATGCA TGCATGCTTGATGCACGACCCAAGACGCGAAGCCCCCTTTTATGATGAGT GAACCAACACCGCCACCCCACTGAGGGTGCGTGATAAAAAGCACGCACGC TCGCATGGCACGATCGACCGCAACAACATGGTCGAGATTACTATAATATC AATCTGCAGAGAGGAACACGGCTGGGTGCCCCGGGGCATCGCCCGGCCAC GTAGCCTTTTTCTCCTTGCCCCCTTCCGTGTGCGGCAGGTCGCCCCCCTT TTTTGTTTCCTTTTTTCTTTTTCGTCTCTTCTTGTCGCAGGCTACCTAGC GCACAAGATCAGCTTCGTGAAACATGTATCAAGAGAAACTGTAGCCCAGA CAGCTTCACCCTGCAAGTGTAGGGATTAATGCTTCGTGACGCTGTAGTTC TAAAGACGTCGTGCGGAGCGGTCTTGTTTATGTTCTGCAGCTCTTGTCTC TGGGCTCGTTTGTGGTGTAATGCTTAGCCCACGGCGTTATGGCTGTGACG TCTCGTACGGCCACAAAATATTTGCGTAGGGAACGCCAGATTGCGGATAG GAGAGAGTGACGGACGAAATCGCTCTTGAATGCTGTGAGTTTTGAATACA GGCAACAGCGTTGAGGATTGCAGGAAAATATGGTTATTCTTATCCCCGCC TTGTCTCGTCGAGCGAGTATTTGAAGTTTTACATAGGGGAGGTATATATA TCATATGATCATACCGGGACGCTGGGAAAATATATTTTATCATGGTTCCT CAGAAATAATACGAGTGTATGAAAAAATAACCAAGCTCTCTCTCTTTCTA TTAATATTTCGGGTTTGGACGCGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig7:1235674..1240947+

>mRNA_F-serratus_M_contig7.18149.1 ID=mRNA_F-serratus_M_contig7.18149.1|Name=mRNA_F-serratus_M_contig7.18149.1|organism=Fucus serratus male|type=CDS|length=4374bp|location=Sequence derived from alignment at F-serratus_M_contig7:1235674..1240947+ (Fucus serratus male)
ATGGCGGATACTGCCCCTGATGATCCCGTGGCGCGTGCTAAGGCAATCGC
TCTAAAATTCGCTGCCCAAGCAGCTGCGCCTTCTCTACCAACCGGAGATG
ACTCTTCTGCAGCACACGGGTCGACAATGACTGTGGCTGTGGCGATGAAT
TCCGCAACGCCCTCTCCTGCTCCAGCCGCTGAATCAGATGGCGGATACTG
CCCCTGATGATCCCGTGGCGCGTGCTAAGGCAATCGCTCTAAAATTCGCT
GCCCAAGCAGCTGCGCCTTCTCTACCAACCGGAGATGACTCTTCTGCAGC
ACACGGGTCGACAATGACTGTGGCTGTGGCGATGAATTCCGCAACGCCCT
CTCCTGCTCCAGCCGCTGAATCAGAACTTGGAAAGCGCAAAAACAGGTGG
GGGGAGGACCCTCAGCCCGCTCCTTCCATGCCGGCTGGATTTGGTATCCC
TGCGGCGCTCATGCAGGCCACTCCAAGCGTAAAATTAGCTCGCAAGAAGT
TGTTCGTGCCCGTGAACGAGCATCCGGATTTCAATTTTATGGGCGTACTG
ATAGGCCCCCGCGGAAGCTCGCTCAAAGCGATGGAGCAGCGCACGGGCGC
CAAAATAGTAATTCGTGGTAAGGGGAGCCAGAAGGATCAAAGTGTCGCCG
ACCCGGAGTCTAACGAGGAGCTGCACGTGACTGTCGAAGGCATCGAGTCG
GCTGTCGCCACCGCCACTGAGGAGATCGAGGGTATCTTTAAGAATCCTCA
CAAGGCCTTGTTAGTAAAGAGCGAACAGCTCAGGAGCCTCGCGGACATGA
ACGGGTCTGGCGGTGCTGGCGGTGACAGTAGTAACAGCTTCGGCGCGAGC
GCGTACGGTCCCGCCGGGGGCGAGGACTATGAGGTCGAGATGGCGGTTCC
AAACAAAATGGTGGGGTTGATTATCGGGCGTGGTGGACAGAACATCCAGT
CCATGCAGCGAGACTATAATATCACCATCCAGATCGCCAGTCAGAACGAG
GTGCCTCCAGGGTCGGAGACTCGTCCGGTCAAGCTCAAGGGAACCCGCCA
GTCGGTCGAGTCCTGCCGATCGAAGATCAACCAGGTCATCTCAGACCGAG
AAAACGAGCTCGCGGGCGGCTACCTGCCCGGTACGCACTATGGCCCCGGC
CCCGCTCCCAGTCGTGAGAGCAACAGTGGGCAACATGCTCACAACCACTT
AACGATTCCAGATGACAAGGTTGGGCTTGTGATTGGCAAAGGCGGCGGGA
CCATCAAGGGCGTGCAATCTCGAACTGGCGCGCACATTCAAATCCCGGGG
GACCCAGACGCGAACGACCGCTCGAAGCGCACGATCGTGATCTCGGCAGC
GTCAAAGGAAGCCGCCGACCGCGCTATGGCTGAAGTGCAGAATATCCTTA
GCGCCGATGCTGCGTCTTTGGGGGGTTCTACGGCACCGCCCGGCTCGCAA
GTTCTTTACGTCGTCATCCCTGATGAAAAGAACTTGGAAAGCGCAAAAAC
AGGTGGGGGGAGGACCCTCAGCCCGCTCCTTCCATGCCGGCTGGATTTGG
TATCCCTGCGGCGCTCATGCAGGCCACTCCAAGCGTAAAATTAGCTCGCA
AGAAGTTGTTCGTGCCCGTGAACGAGCATCCGGATTTCAATTTTATGGGC
GTACTGATAGGCCCCCGCGGAAGCTCGCTCAAAGCGATGGAGCAGCGCAC
GGGCGCCAAAATAGTAATTCGTGGTAAGGGGAGCCAGAAGGATCAAAGTG
TCGCCGACCCGGAGTCTAACGAGGAGCTGCACGTGACTGTCGAAGGCATC
GAGTCGGCTGTCGCCACCGCCACTGAGGAGATCGAGGGTATCTTTAAGAA
TCCTCACAAGGCCTTGTTAGTAAAGAGCGAACAGCTCAGGAGCCTCGCGG
ACATGAACGGGTCTGGCGGTGCTGGCGGTGACAGTAGTAACAGCTTCGGC
GCGAGCGCGTACGGTCCCGCCGGGGGCGAGGACTATGAGGTCGAGATGGC
GGTTCCAAACAAAATGGTGGGGTTGATTATCGGGCGTGGTGGACAGAACA
TCCAGTCCATGCAGCGAGACTATAATATCACCATCCAGATCGCCAGTCAG
AACGAGGTGCCTCCAGGGTCGGAGACTCGTCCGGTCAAGCTCAAGGGAAC
CCGCCAGTCGGTCGAGTCCTGCCGATCGAAGATCAACCAGGTCATCTCAG
ACCGAGAAAACGAGCTCGCGGGCGGCTACCTGCCCGGTACGCACTATGGC
CCCGGCCCCGCTCCCAGTCGTGAGAGCAACAGTGGGCAACATGCTCACAA
CCACTTAACGATTCCAGATGACAAGGTTGGGCTTGTGATTGGCAAAGGCG
GCGGGACCATCAAGGGCGTGCAATCTCGAACTGGCGCGCACATTCAAATC
CCGGGGGACCCAGACGCGAACGACCGCTCGAAGCGCACGATCGTGATCTC
GGCAGCGTCAAAGGAAGCCGCCGACCGCGCTATGGCTGAAGTGCAGAATA
TCCTTAGCGCCGATGCTGCGTCTTTGGGGGGTTCTACGGCACCGCCCGGC
TCGCAAGTTCTTTACGTCGTCATCCCTGATGAAAAGGTTGGGCTGGTTAT
TGGCAAGGGCGGGACGACCATCAAGGAACTTCAAAACCGCACGGGCTGTC
GCATCCAAATTCCGTCTCAGACAGATGCTGGTTCTCACCCACCCTCGCGC
CGCGTGACCCTGACTGGTGTGGGTGACGCCCCCCACAACGCCAAGCGTGA
CATAGAGATGATGGTTCAAGACGACGACCGCAACCGCTACGGAGGTGGCG
TTGTCCCTCCTCCCCACCAGGCATATGGATCCCCGCCCCCCGGACACTAC
GGCGGCCCGCCCGCGCCCTACGGAGCTCCACCTCCACAAGGTTACTACGG
CGCCCCCCCCCCTCAGCCGCAGCCATACCAACCTTACGGGATGCCGCCGC
ATCAGCCATACCAGCCGGTGCCTCAGTACCAGCCTTACGGGCAGCCACTG
CCTCAGCAGGTTGGGCTGGTTATTGGCAAGGGCGGGACGACCATCAAGGA
ACTTCAAAACCGCACGGGCTGTCGCATCCAAATTCCGTCTCAGACAGATG
CTGGTTCTCACCCACCCTCGCGCCGCGTGACCCTGACTGGTGTGGGTGAC
GCCCCCCACAACGCCAAGCGTGACATAGAGATGATGGTTCAAGACGACGA
CCGCAACCGCTACGGAGGTGGCGTTGTCCCTCCTCCCCACCAGGCATATG
GATCCCCGCCCCCCGGACACTACGGCGGCCCGCCCGCGCCCTACGGAGCT
CCACCTCCACAAGGTTACTACGGCGCCCCCCCCCCTCAGCCGCAGCCATA
CCAACCTTACGGGATGCCGCCGCATCAGCCATACCAGCCGGTGCCTCAGT
ACCAGCCTTACGGGCAGCCACTGCCTCAGCAGCCTGCCTACCCGCAACAG
CCACTCCAATACCAGCCGTTGCCGCAGATGGCGCCGGCCCCCGCAGTACC
CGAGCAGGCCCCAGCACCGGGACAAATGCAGCAGCCTGCTCAGCAGCAGC
AACAGTCGGCTCAGCAGCAGCCTACGCAGCAGCAGCAGTCTGCCCAGCAG
CAACAGCAACAGCAGCAGCAGCAGCAGCCCACTCAGCAACAACAGTACTA
TCAGCAGCAACAGGCCCCTTCTCCGGCCGCCCCCGCACCCGCTCCTCAGC
CCGCTGCTGCTGCCTCCAGCCCGGCCCCTGGTCCCGTGGACATGACTCAG
TACCACGATCCTGCCTACCCGCAACAGCCACTCCAATACCAGCCGTTGCC
GCAGATGGCGCCGGCCCCCGCAGTACCCGAGCAGGCCCCAGCACCGGGAC
AAATGCAGCAGCCTGCTCAGCAGCAGCAACAGTCGGCTCAGCAGCAGCCT
ACGCAGCAGCAGCAGTCTGCCCAGCAGCAACAGCAACAGCAGCAGCAGCA
GCAGCCCACTCAGCAACAACAGTACTATCAGCAGCAACAGGCCCCTTCTC
CGGCCGCCCCCGCACCCGCTCCTCAGCCCGCTGCTGCTGCCTCCAGCCCG
GCCCCTGGTCCCGTGGACATGACTCAGTACCACGATCAATTCTGGCAGTA
TGCGGCGTACTACGGAGAACAAGTGGCTCGCGACCAATACGGTGCTTGGG
CTCCGCCCGTGGGCACCCCTCCCCCTCCCGGCGTTACCATCCCTCCCCCC
GGTCAGGCTAACCCCCCACCGCAAGCTTGACAATTCTGGCAGTATGCGGC
GTACTACGGAGAACAAGTGGCTCGCGACCAATACGGTGCTTGGGCTCCGC
CCGTGGGCACCCCTCCCCCTCCCGGCGTTACCATCCCTCCCCCCGGTCAG
GCTAACCCCCCACCGCAAGCTTGA
back to top