mRNA_F-serratus_M_contig7.18147.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7.18147.1 vs. uniprot
Match: D7FLD2_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD2_ECTSI) HSP 1 Score: 372 bits (954), Expect = 2.220e-115 Identity = 245/490 (50.00%), Postives = 292/490 (59.59%), Query Frame = 1
Query: 19 EGNIITIRGFPVYFPKGRKPFASQLALMSKFLVGVQKRENCLLESPTGTGKTMALLCAALAWQRRQNEDGDMMTESDTESEEGVDRPVVNAEDKEILPSFDDFRYAGPKDVGSAARSKHGREGKVVVELGYEET-EGSKGGVSATGHTKQRLLSDDDDV-----FESPKKKRTKSSSYVAPLTDGKICPNKDTRKNIDM--TADGTYVEASSVTSDTPLNAIGKGHSNVKSPAASKLSAERERPMVKKKGEPRKRRTKIKRKRPRRVYFCSRTHSQLTQVVAELQKCVAACPGASAVHIGEHGQGFKMSLLASRKSTCINKTACNDPKGVDDACKRLLKENACPHYS---------------------------------------------PYNYLVDPSVREVMGIKLKDAVVIFDEAHNLEDVAREAASAKLSLRALANAADEMQRLGSKCPPLAPAYNSLRRVIVGVQTFLEEKEATLPLETYETA 1329
E NII IRGFPV FPKGRKPFA QLALMSK LVGVQK ENCLLESPTGTGKT+ALLCAALAWQR+Q E G SD ESEE P+++ E L SF+DFRY PK A +EL YE+ E K A T DD D FESPKKKR K NKD + ID +D + ++ + D+P+ N+ P + ++ + +P KK+G+ K+ + +RKR RVYFCSRTHSQL QVVAEL+ C A SAV IG+ G+ F M+LLASRKSTCIN+ AC+DPKG+DDACKRLLKE AC +Y PYNYLVDP VRE+MGI LK+AVVIFDEAHNLED AREAASAKLSLRALANAA EM RLG+K L+P+Y+ LR VI+GVQ FLEE+++ L + +YE A
Sbjct: 3 EENIIMIRGFPVSFPKGRKPFAPQLALMSKLLVGVQKGENCLLESPTGTGKTLALLCAALAWQRQQREQGVAAETSDCESEE---EPMIDLGPHEPLRSFNDFRYVEPKVQQQAP-----------IELAYEDAVEPGKQEEPAGDRTS---FYDDYDXXXXXXFESPKKKRQK---------------NKDVEEEIDSPENSDAPHRDSHQDSPDSPV----PDEPNLGKPPSEAVTPDDVKP--KKRGKAVKQ--EARRKRAPRVYFCSRTHSQLNQVVAELRTCRTAFQDTSAVGIGDDGKPFSMALLASRKSTCINREACSDPKGIDDACKRLLKEKACTYYRRAKWAQTKLPPVWDVEEAVRMGQENQACPYYTARASLVNADLVLCPYNYLVDPGVREIMGINLKNAVVIFDEAHNLEDSAREAASAKLSLRALANAAGEMHRLGAKSLSLSPSYDLLRGVIIGVQAFLEEEDSRLTIGSYEKA 452
BLAST of mRNA_F-serratus_M_contig7.18147.1 vs. uniprot
Match: A0A6H5JGC9_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC9_9PHAE) HSP 1 Score: 247 bits (631), Expect = 2.090e-69 Identity = 162/347 (46.69%), Postives = 201/347 (57.93%), Query Frame = 1
Query: 100 MSKFLVGVQKRENCLLESPTGTGKTMALLCAALAWQRRQNEDGDMMTESDTESEEGVDRPVVNAEDKEILPSFDDFRYAGPKDVGSAARSKHGREGKVVVELGYEETEGSKGGVSATGHTKQRLLSDDDDVFESPKKKRTKSSSYVAPLTDGKICPNKDTRKNIDMTADGTYVEASSVTSDTPLNA---IGKGHSNVKSPAASKLSAERERPMVKKKGEPRKR-RTKIKRKRPRRVYFCSRTHSQLTQVVAELQKCVAACPGASAVHIGEHGQGFKMSLLASRKSTCINKTACNDPKGVDDACKRLLKENACPHYSPYNYLVDPSVREVMGIKLKDAVVIFDEAHNL 1128
MSK L+GVQK ENCLLESPTGTGKT+ALLCA LAWQR+Q E G + SD ESEE P+++ +E L SFDDFRY PK A ++L YE+ + G + DD D I + ++DG + ++ + D+P+ + K S+ +PA K KK+G+ K + + +RKR RVYFCSRTHSQL QVVAEL+ C A SAV IG+ G+ F M+LLASRKS CIN ACNDPKG+DDACKRLLKE AC +YSPYNYLVDP VRE+MGI LK+AVVIFDEAH +
Sbjct: 1 MSKLLMGVQKGENCLLESPTGTGKTLALLCAVLAWQRQQREQGVTVETSDCESEE---EPMIDLGSQEPLRSFDDFRYVEPKVQQHAP-----------IKLAYEDA--VEPGKQEEPVGDRTSFYDDYDXXXXXXXXXXXXXXXXXXXXXXMI--------DSPESSDGPHHDSHQDSPDSPVADEPDLSKPPSDAVTPADVK---------PKKRGKAVKAVKQEARRKRVPRVYFCSRTHSQLNQVVAELRTCRTAFQDTSAVGIGDDGKPFSMALLASRKSMCINSEACNDPKGIDDACKRLLKEKACTYYSPYNYLVDPGVREIMGIDLKNAVVIFDEAHKV 314
BLAST of mRNA_F-serratus_M_contig7.18147.1 vs. uniprot
Match: A0A6G0XE08_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XE08_9STRA) HSP 1 Score: 151 bits (381), Expect = 7.500e-36 Identity = 141/506 (27.87%), Postives = 221/506 (43.68%), Query Frame = 1
Query: 1 MESNDNEGNIITIRGFPVYFPKGRKPFASQLALMSKFLVGVQKRENCLLESPTGTGKTMALLCAALAWQRRQNEDGDMMTESDTESEEGVDRPVV----NAEDKEILPSFDDFRYAGPKDVGSAARSKHGREGK-----VVVEL-GYEETEGSKGGVSATGHTKQRLLSDDDDVFESPKKKRTKSSSYVAPLTDGKICPNKDTRKNIDMTADGTYVEASSVTSDTPLNAIGKGHSNVKSPAASKLSAERERPMVKKKGEPRKRRTKIKRKRPRRVYFCSRTHSQLTQVVAELQKCVAACPGASAVHIGEHGQGFKMSLLASRKSTCINKTACNDPKG-VDDACKRLLK-----------------------------------ENACPHY-------------SPYNYLVDPSVREVMGIKLKDAVVIFDEAHNLEDVAREAASAKLSLRAL------ANAADEMQRLGSKCPPLAPAYNSLRRVIVGVQTFLEEKEATLPLETYE 1323
ME E I G+ V FP+G+KPF +Q A+M+K L+ ++K++N LLESPTG+GKT+ALLCA++AW ++ + ++M + + + + + A ++ +F+ F+Y+ ++ S+ + VVV+ G E + + + + L S + PKK+ PL G + P+ K + T + V + T D P + + KR+R ++YFCSRTHSQL+QV+ EL+KC + KM+LL ++K CI+ + + G ++DAC LL CP++ PYNY++ P +R I LK+AVVIFDEAHN+EDV R+AAS +LS L NAA +QR SK P + LR+++ G +L E+ L YE
Sbjct: 1 MEVKYEEKPGFMIMGYKVEFPEGKKPFPAQFAVMNKVLIAMKKQQNALLESPTGSGKTLALLCASMAWHQQHS--NELMEAHQVQINDYITKKLEYEAKRAAARDNGQTFEQFKYSPHDNMQQTIDSRENPQSSASSAPVVVDFSGDSEKKDPTIAIDKSDNDDDELESISFSQIQRPKKR---------PLY-GAVLPHDSPVKQLIPTP--SLVSNVAKTPDIPPPEMEEAP---------------------------------KRERTPQIYFCSRTHSQLSQVIQELKKC-------------QFASRIKMTLLGAKKHYCIHPSVRKEEAGALNDACSDLLDARNCRFQTKGNQRNELRNYTPSVWDIEDLVELGETHRECPYFFARGQQESAEIIFCPYNYIIHPEIRSSCAINLKNAVVIFDEAHNIEDVCRDAASLELSFDTLDECLKIINAA--LQR--SKEPSYKQNLSILRKLVQGWFQWLSNSESMLKPMGYE 442
BLAST of mRNA_F-serratus_M_contig7.18147.1 vs. uniprot
Match: D0NXC2_PHYIT (Helicase ATP-binding domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=D0NXC2_PHYIT) HSP 1 Score: 144 bits (362), Expect = 2.400e-33 Identity = 127/481 (26.40%), Postives = 218/481 (45.32%), Query Frame = 1
Query: 10 NDNEGNIITIRGFPVYFPKGRKPFASQLALMSKFLVGVQKRENCLLESPTGTGKTMALLCAALAWQRRQNEDGDMMTESDTESEEGVDRPVVNAEDKEILPSFDDFRYAGPKDVGSAARSKHGREGKVVVELGYEETEGSKGGVSATGHTK---QRLLSDDDDVFESPKKKRTKSSSYVAPLTDGKICPNKDTRKNIDMTADGTYVEASSVTSDTPLNAIGKGHSNVKSPAASKLSAERERPMVKKKGEPRKRRTKIKRKRPRRVYFCSRTHSQLTQVVAELQKCVAACPGASAVHIGEHGQGFKMSLLASRKSTCINKTACNDPKGVDDACKRLLKENACPHY------------------------------------------------SPYNYLVDPSVREVMGIKLKDAVVIFDEAHNLEDVAREAASAKLSLRALANAADEMQRLGSKCPPLAPAYNSLRRVIVGVQTFLEEKEA 1299
+D N I G+ V FP+G++PF +Q A+M+K L ++ ++ LLESPTG+GKT+ALLC++L +Q++ +D E+ + +E + A+ + + +V E + T+ + T T+ Q+L DDDDV +P + +S+++ TRK ++ D T V+ V + A VK A +L ++P K KR P +++FCSRTHSQL QVV EL+ C + S + + + +L S+++ C+N+ DP VD+ C+ L+ ++C + +PYNYL+DP++R +GI LKDA+++ DEAHN+ED R +AS +++ ALA A+ + + K YN+L +++ G+ +L+ ++
Sbjct: 2 SDAAQNRFMIMGYNVEFPQGKRPFPAQFAVMNKVLTALKTEQHALLESPTGSGKTLALLCSSLTFQKQFVKD---KVEAHRKQQEDPKFKELEAKKHAQXXXXXXXXXXXXXXXXXXXIEQARKARRVTEEEADDATQTTFQPTQETQATQVAGQQLEQDDDDV--APTQPSANTSAWMT------------TRKR-ELETDSTAVKKKRVLPKSFAFAAKDADVKVK---AEQLDVAPDQP-------------KKKRVVPPQIFFCSRTHSQLAQVVDELKNCPVSYLD-SPEDSNTYTKQLQTCVLGSKRNMCVNRKVNRDPSQVDEKCRLALEGSSCSFFRKRKKTNDLKRSVPPVWDIEDLVKLAQKHRECAYFHAREALDHANIVFAPYNYLLDPTIRGAVGITLKDAIIVLDEAHNVEDTCRSSASVEVTTDALA-ASIKAFTIVIKHGNRPKTYNALLKLLNGINRWLQSVDS 446
BLAST of mRNA_F-serratus_M_contig7.18147.1 vs. uniprot
Match: A0A2C9JZW0_BIOGL (Helicase ATP-binding domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JZW0_BIOGL) HSP 1 Score: 138 bits (347), Expect = 1.430e-32 Identity = 143/505 (28.32%), Postives = 207/505 (40.99%), Query Frame = 1
Query: 37 IRGFPVYFPKGRKPFASQLALMSKFLVGVQKRENCLLESPTGTGKTMALLCAALAWQRRQNEDGDMMTESDTESEEGV----DRPVVNAEDKEIL-------PSF-------DDFRYAGPKDVGSAARS---KHGREGKVVVELGYEETEGSKGGVSATGHTKQRLLSDDDDVFESPKKKRTKSSSYVAPLTDGKI-CPNKDTRKNIDMTADGTYVEASSVTSDTPLNAIGKGHSNVKSPAASKLSAERERPMVKKKGEPRKRRTKIKRKRPRRVYFCSRTHSQLTQVVAELQKCVAACPGASAVHIGEHGQGFKMSLLASRKSTCINKTACNDPKGVDDACKRLL---------------------------------------KENACPHY-------------SPYNYLVDPSVREVMGIKLKDAVVIFDEAHNLEDVAREAASAKLSLRALANAADEMQRLGSKCPPLAPAYNSLRRVIVGVQTFLEEKEATLPLETYETA 1329
I G VYFP KP+ SQ +M K + G+ +R+NCLLESPTG+GK++ALLC++LAWQ + E D + + + + + N E K L PS DDF+ K A++ KH V + YE+ + G+ Q++L D + K + KS AP + + CP D+P +G S VK+ KLS ++YF +RTH Q+ Q+V EL+K + H KM++L SR+ TCI+ K +D CK LL K+ ACP++ PYNYLVDP VRE M I LK +VI DEAHN+ED AREAAS +S ++ A ++ L K A Y+ LR V + F+ E ++ + + ++ A
Sbjct: 7 ISGISVYFPC--KPYPSQFTMMDKIIKGLDRRQNCLLESPTGSGKSLALLCSSLAWQAAEKEKRDKEDDEEIQRANCICSCHSQATANTEKKSSLIDLTQPEPSNMCLEIDNDDFKMNATKFNIPASKKNPLKH-------VSIAYEDDKSEDNGL-------QKILQSVDAILGVKKVEDVKS--VAAPECEQCLQCP-----------------------CDSP-----EGKSKVKN----KLS---------------------------KIYFGTRTHKQVAQIVRELKK--------TKYH------DVKMTVLGSREHTCIHPDVSR-MKAKNDGCKELLNGPGCRYKDGTNRLLSQSVLKSAGLSSAWDIEDLVQLCQKKKACPYFLSRGLKDDSDLIICPYNYLVDPIVREAMAISLKGHIVILDEAHNIEDAAREAASQSISQDSIEKAISDIDELIEKNINFAD-YSRLRAVFFRLNNFINENKSKMEQKDFDKA 418
BLAST of mRNA_F-serratus_M_contig7.18147.1 vs. uniprot
Match: K3X4V5_GLOUD (DNA helicase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4V5_GLOUD) HSP 1 Score: 141 bits (356), Expect = 1.500e-32 Identity = 139/521 (26.68%), Postives = 208/521 (39.92%), Query Frame = 1
Query: 25 NIITIRGFPVYFPKGRKPFASQLALMSKFLVGVQKRENCLLESPTGTGKTMALLCAALAWQRR---------------------QNEDGDMMTESDTESEEGVDRPVVNAEDKEIL----------------PSFDDFRYAGPKDV--GSAARSKHGREGKVVVELGYEETEGSKGGVSATGHTKQRLLSDDDDVFESPKKKRTKSSSYVAPLT----------DGKICPNKDTRKNIDMTADGTYVEASSVTSDTPLNAIGKGHSNVKSPAASKLSAERERPMVKKKGEPRKRRTKIKRKRPRRVYFCSRTHSQLTQVVAELQKCVAA---CPGASAVHIGEHGQGFKMSLLASRKSTCINKTACNDPKGVDDACKRLLKENACPH------------------------------------------------YSPYNYLVDPSVREVMGIKLKDAVVIFDEAHNLEDVAREAASAKLSLRALANAADEMQRLGSKCPPLAPAYNSLRRVIVGVQTFLE 1287
N + I G+ V FP G+KPF +QLA+M+K L+ ++ ++ LLESPTG+GKT+ALLC++L +QR+ Q M E+ + + N E I PSF+ FR+ GPK GS S ++ + +E A ++S V + KKR+K V+ + D + P K T ++ AS S + R P +++FCSRTHSQL+QVV EL+ C + P A+ + E KM +L S+ CINK A DP VDD C++LL N C + + PYNY++DPS+R + I LK+A++IFDEAHN+ED R +AS +L+ L A + K P Y+SL +++ G+ +L+
Sbjct: 81 NKVMIMGYNVDFPMGKKPFPAQLAVMNKVLLSLKTSQHALLESPTGSGKTLALLCSSLTFQRQYVTELLAAHEQQRKIAKEAYAQKMKVLMDKVQQAEAVAALQQQYGNVEASGIAGVKAERIDDDDFALSQPSFERFRFPGPKSAATGSGWISMESKKSTMKMES------------EANDDFDSHVISSLTTVASATIKKRSKRVLPVSSVAVSGAENDGDDDMESPPELKKLKTKKRTLPSSFAVASVAASXXMGXXXHESFXXXXXXXXXXXXXXXX--------------XXXSRLMPPKIFFCSRTHSQLSQVVDELKNCPVSYMQSPDATNLFASE----LKMCVLGSKSHFCINKKANKDPAEVDDKCRQLLDVNKCAYATKRRNTNDLRRLAPPVWDIEDLVALAKRHRECAFFHARDVLVDANIVFCPYNYVLDPSIRSAVNISLKNAIIIFDEAHNVEDTCRSSASMELNTEVLGLAIKAFTAV-IKNGNRPPRYHSLLKLLNGLNRWLQ 570
BLAST of mRNA_F-serratus_M_contig7.18147.1 vs. uniprot
Match: A0A067CCE9_SAPPC (DNA helicase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCE9_SAPPC) HSP 1 Score: 140 bits (353), Expect = 3.340e-32 Identity = 132/481 (27.44%), Postives = 196/481 (40.75%), Query Frame = 1
Query: 37 IRGFPVYFPKGRKPFASQLALMSKFLVGVQKRENCLLESPTGTGKTMALLCAALAWQRRQNEDGDMMTESDTESEEGVDRPVVNAEDKEILPSFDDFRYAGPKDVGSAARSKHGREGKVVVELGYEETEGSKGGVSATGHTKQRLLSDDDDVFESPKKKRTKSSSYVAPLTDGKICPNKDTRKNIDMTADGTYVEASSVTSDTPLNAIGKGHSNVKSPAASKLSAERERPMVKKKGEPRKRRTKIKRKRPRRVYFCSRTHSQLTQVVAELQKCVAACPGASAVHIGEHGQGFKMSLLASRKSTCINKTACN-DPKGVDDACKRLLKENAC-----------------------------------PHY-------------SPYNYLVDPSVREVMGIKLKDAVVIFDEAHNLEDVAREAASAKLSLRALANAADEMQRLGSKCPPLAPAYNSLRRVIVGVQTFLE--EKEATLPLETYET 1326
I G+ V FP+G+ PF SQLA+MSK L+ ++K++N LLESPTG+GKT+ALLC++LAWQR+ +L D R A K + + K V A + S DDD AP++ + +K + + Y A S T+ TP +A +V + A K+ +YFCSRTHSQ++QVV EL++C H KM +L S+K C+N N DP ++D C +EN+C P+Y PYNY++DP++R + I LK A+VI DEAHN+EDV R +AS +L+ L +A+ + +P+Y L +++ G + +L ++E L YET
Sbjct: 22 IMGYGVDFPQGKTPFPSQLAVMSKVLLALKKQQNALLESPTGSGKTLALLCSSLAWQRQH-----------------------------ML----DLREAENKRINEEVQRKLDAPAPV-----------------AAPDLDSSVASIDDDF---------------APVSFSQFQFDKKRQLPDSLLP---YTTAPSATASTPASASTTA--DVPAVAKEKIPT---------------------------IYFCSRTHSQISQVVQELRRC-------------PHADKVKMVVLGSKKHYCVNPAVRNLDPGKINDECSTKREENSCKFVKKLKMHNEMKKVVPPVWDIEELVEVGEELRECPYYYTHAAVEQATLVFCPYNYIMDPTIRAAVKIDLKSAIVILDEAHNIEDVCRSSASMELTYDQLEDASKSFEITIKAQIMKSPSYIMLLKILNGWKRWLSNVDREKQLRPNGYET 392
BLAST of mRNA_F-serratus_M_contig7.18147.1 vs. uniprot
Match: A0A8K1C7G1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7G1_PYTOL) HSP 1 Score: 140 bits (352), Expect = 4.710e-32 Identity = 130/492 (26.42%), Postives = 208/492 (42.28%), Query Frame = 1
Query: 19 EGNIITIRGFPVYFPKGRKPFASQLALMSKFLVGVQKRENCLLESPTGTGKTMALLCAALAWQR----------RQNEDGDMMTESD----TESEEGVDRPVVNAEDKEIL---PSFDDFRYAGPKDVGSAARSKHGREGKVVVELGYEETEGSKGGVSATGHTKQRLLSDDDDVFESPKKKRTKSSSY-VAPLTDGKICPNKDTRKNIDMTADGTYVEASSVTSDTPLNAIGKGHSNVKSPAASKLSAERERPMVKKKGEPRKRRTKIKRKRPRRVYFCSRTHSQLTQVVAELQKC---VAACPGASAVHIGEHGQGFKMSLLASRKSTCINKTACNDPKGVDDACKRLLKENACPHYS------------------------------------------------PYNYLVDPSVREVMGIKLKDAVVIFDEAHNLEDVAREAASAKLSLRALANAADEMQRLGSKCPPLAPAYNSLRRVIVGVQTFLE 1287
E N + I G+ V FP G+KPF +QLA+M+K L+ ++ ++ LLESPTG+GKT+ALLC++L +Q+ R+ + ++M ++E V + V +D + P+FD FR+ ++ G+ E K +A H +D S KKKR +S+ VA G+ T+ + +E TS+T T+ +R P +++FCSRTHSQL QVV EL+ C + P AS + K +L S+ C+N + +DD C+ L+ N C ++ PYNYL+DP++R+ + I LKD++++ DEAHN+ED R +AS +L+ L NAA L K P YN++ +++ G+ +L+
Sbjct: 27 EENKVMIMGYNVVFPAGKKPFPAQLAVMNKVLLALKTGQHALLESPTGSGKTLALLCSSLTFQKQFVKDLVEGERKRIEAELMALETKVVGVKNELFVAQTSVGDDDDDFASTQPTFDQFRFTNNGNLDQD---------------GWISMEDKKRSSAAIAH---------EDAPPSSKKKRALPTSFHVANAVKGE-------------TSGDSSMEDFHSTSNTS--------------------------------------TRSRRIVPPKIFFCSRTHSQLAQVVDELKSCPPSYISSPDAS----NPYADTLKTCVLGSKGHFCVNSKVNKNLAELDDKCRAALETNGCSYFRKRKKTNDLKRVAPPVWDLEDIVALAKKHRECAFFHSRDALAEANIVFCPYNYLLDPTIRQSVNISLKDSIIVLDEAHNVEDTCRSSASIELTTEVL-NAAIASFGLVIKEGKRPPYYNNMLKILNGLLRWLK 438
BLAST of mRNA_F-serratus_M_contig7.18147.1 vs. uniprot
Match: A0A484DSH0_BRELC (DNA helicase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSH0_BRELC) HSP 1 Score: 139 bits (349), Expect = 1.140e-31 Identity = 129/479 (26.93%), Postives = 205/479 (42.80%), Query Frame = 1
Query: 1 MESNDNEGNIITIRGFPVYFPKGRKPFASQLALMSKFLVGVQKRENCLLESPTGTGKTMALLCAALAWQRRQNED---GDMMTESDTESEEGVDRPVVNAEDKEILPSFDDFRYAGPKDVGSAARSKHGREGKVVVELGYEETEGSKGGVSATGHTKQRLLSDDDDVFESPKKKRTKSSSYVAPLTDGKICPNKDTRKNIDMTADGTYVEASSVTSDTPLNAIGKGHSNVKSPAASKLSAERERPMVKKKGEPRKRRTKIKRKRPRRVYFCSRTHSQLTQVVAELQKCVAACPGASAVHIGEHGQGFKMSLLASRKSTCINKTACNDPKGVDDACKRLLK------------------------------------------------ENACPHYSPYNYLVDPSVREVMGIKLKDAVVIFDEAHNLEDVAREAASAKLSLRALANAADEMQRLGSKCPPLAPAYNSLRRVIVGVQTFL 1284
M+ N I G+ V FP+G++PF +Q A+M+K L ++ ++ LLESPTG+GKT+ALLC+ L +Q++ +D M+ + D + +E + R+ + + E + E S+ D+ E+ T+ SS K TRK SDT +A K S A + L + + ++ K E +KR P ++FCSRTHSQLTQVV EL+ C S + + GQ + +L S+++ C+N+ DP VD+ C+ L+ ENA ++PYNYL+DP++R +GIKLK+A++I DEAHN+ED R +AS ++S+ L A+ + + K +YN+L +V+ GV +L
Sbjct: 1 MDHATPTANPYLIMGYSVEFPQGKRPFPAQFAVMNKVLTALKTEQHALLESPTGSGKTLALLCSTLTFQKQYFKDQMAAQMLRQQDVKWKEXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXESARKLRQIDETPLKTVEESE-----------------DEAIEA-----TQCSSL------------KTTRKR---------------ESDTDSSATIKKRVLPPSFALATLETDTKNELIDVKVE-------LKRVVPPCIFFCSRTHSQLTQVVQELKNCPV-----SYLASPQEGQQLQTCVLGSKRNMCVNRNVNRDPSQVDEKCRLALEGAKCLYFKKRKRVNDLKRLTPSVWDIEDLVRLAQKHRECAYFHAREALENAHIVFAPYNYLLDPTIRHAVGIKLKNAIIILDEAHNVEDTCRSSASVEISMEVL-EASIKAFTIVIKHGNRPKSYNALLKVLNGVHRWL 410
BLAST of mRNA_F-serratus_M_contig7.18147.1 vs. uniprot
Match: A0A2P4Y7H1_9STRA (DNA repair helicase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y7H1_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.340e-31 Identity = 120/478 (25.10%), Postives = 205/478 (42.89%), Query Frame = 1
Query: 25 NIITIRGFPVYFPKGRKPFASQLALMSKFLVGVQKRENCLLESPTGTGKTMALLCAALAWQRRQNEDGDMMTESDTESEEGVDRPVVNAEDKEILPSFDDFR-----YAGPKDVGSAARSKHGREGKVVVELGYEETEGSKGGVSATGHTKQRLLSDDDDVFESPKKKRTKSSSYVAPLTDGKICPNKDTRKNIDMTADGTYVEASSVTSDTPLNAIGKGHSNVKSPAASKLSAERERPMVKKKGEPRKRRTKIKRKRPRRVYFCSRTHSQLTQVVAELQKCVAACPGASAVHIGEHGQGFKMSLLASRKSTCINKTACNDPKGVDDACKRLLKENACPHY------------------------------------------------SPYNYLVDPSVREVMGIKLKDAVVIFDEAHNLEDVAREAASAKLSLRALANAADEMQRLGSKCPPLAPAYNSLRRVIVGVQTFLEEKEA 1299
N I G+ V FP+G++PF +QLA+M+K L ++ ++ LLESPTG+GKT+ALLC++L +Q++ V V + ++ P+F + E++ + + +T T + D D + T+ S+ LT TRK ++ D T + V + +A+ K+P EP+K+R P R+YFCSRTHSQL QVV EL+ C A S + + + +L S+++ C+N+ DP VD+ C+ L+ ++C ++ +PYNYL+DP++R+ +GI LKD++V+ DEAHN+ED R +AS +++ L A+ + + K YN+L +++ G+ +L+ ++
Sbjct: 5 NAFMIMGYSVEFPQGKRPFPAQLAVMNKVLTALKTEQHALLESPTGSGKTLALLCSSLTFQKQF-----------------VKEKVAAIKKQQEDPTFKEQEARKQAXXXXXXXXXXXXXXXXXXXXXXXXXXXRESDSTPSTLQSTQETATQATQVDQDEVAA-----TQPSADEGWLT---------TRKR-ELENDSTAAKKKRVLPTSFASAVDVKTEEHKAP------------------EPKKKRVV-----PPRIYFCSRTHSQLAQVVDELKNCPVAYLD-SPEDSNTYTKQLQTCVLGSKRNMCVNRKVNRDPSQVDEKCRLALEGSSCSYFRKRKKTNDLRRTVPPVWDIEDLVKLAQKHRECAYFHAREALDHANIVFAPYNYLLDPTIRDAVGITLKDSIVVLDEAHNVEDTCRSSASVEVTTEVL-TASIKAFSIVIKHGNRPKTYNALLKLLNGISRWLQSVDS 425 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7.18147.1 >prot_F-serratus_M_contig7.18147.1 ID=prot_F-serratus_M_contig7.18147.1|Name=mRNA_F-serratus_M_contig7.18147.1|organism=Fucus serratus male|type=polypeptide|length=443bp MESNDNEGNIITIRGFPVYFPKGRKPFASQLALMSKFLVGVQKRENCLLEback to top mRNA from alignment at F-serratus_M_contig7:1217448..1223310+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7.18147.1 ID=mRNA_F-serratus_M_contig7.18147.1|Name=mRNA_F-serratus_M_contig7.18147.1|organism=Fucus serratus male|type=mRNA|length=5863bp|location=Sequence derived from alignment at F-serratus_M_contig7:1217448..1223310+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7:1217448..1223310+ >mRNA_F-serratus_M_contig7.18147.1 ID=mRNA_F-serratus_M_contig7.18147.1|Name=mRNA_F-serratus_M_contig7.18147.1|organism=Fucus serratus male|type=CDS|length=2658bp|location=Sequence derived from alignment at F-serratus_M_contig7:1217448..1223310+ (Fucus serratus male)back to top |