mRNA_F-serratus_M_contig7.18137.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig7.18137.1
Unique NamemRNA_F-serratus_M_contig7.18137.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5JN45_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN45_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 6.570e-91
Identity = 159/292 (54.45%), Postives = 200/292 (68.49%), Query Frame = 1
Query:  163 KMEALMMTMSQLVQGTAPTTGD----GQESRSGRHTAPGVDRGRIDHAPNTG-GVQDR--------PQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYEIQKQQLLSQKSLETEEITRVLRTRAG 999
            KME  M  +S+LV  T P  G     G ESR G H +PG   GR D APNTG GV+          PQ  S  S G+ +R+  + E  A +    ++R PRL+QLNFDG E NWPMFQN+F TQV  CGM   L DSRDI V G+ DE ++ QG++  EI  Y+DLW ML GAI+D TTKM+VF  +GP+AAWRAL   FSPLTGGEQISL+GKFF+A+Q+  QDP  F+ +F S VT+LE+AFDQPI KMLV+ RFL+ L  ++++QKQQLL+QK+L+ EEI RVLR R+G
Sbjct:   43 KMEGFMDALSRLVPETPPAAGTAAGGGGESREGMHASPGA--GREDQAPNTGRGVEGARGGLLGPVPQE-STPSEGNVSRDGMNSEHRARYTTTSHARIPRLKQLNFDGHEKNWPMFQNEFTTQVQTCGMTRALTDSRDIVVQGVDDEGMVGQGVKFDEISMYRDLWGMLTGAISDNTTKMMVFGCKGPSAAWRALVETFSPLTGGEQISLMGKFFSARQEKKQDPPVFFQEFKSIVTSLEIAFDQPIPKMLVYTRFLDGLSIDFDVQKQQLLAQKTLDEEEILRVLRARSG 331          
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5KFW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW3_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 1.690e-89
Identity = 158/299 (52.84%), Postives = 202/299 (67.56%), Query Frame = 1
Query:  127 EEFATAIEDVSAKMEALMMTMSQLVQGTAPTTGDGQESRSGRHTAPGVDRGRIDHAPNTG-------GVQDR-PQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYEIQKQQLLSQKSLETEEITRVLRTRAG 999
            EE  TAI+  +AKME++M        GT        ESR GRH  PG   GR++ AP TG       G+ D  PQ P+  S  D +RE+   +  A +   + +R PRL+QLNFDG E NW MF+NDF+TQV  CGMM  L DSRDI + GM ++ ++EQG+    +  Y+DLW MLVGAI+D TTK++V++ +GP+AAWRALE  F+PLTGGEQISLIGKFF A+Q+   DP  F+ QF STVT+LE A  Q I KMLV+ARFL+AL  EY++QKQQLLS++ LE EE+ RVLRTR G
Sbjct:   18 EEVKTAIDQANAKMESMMTEN----LGTVMEALSRGESRGGRHAPPGA--GRVNQAPITGKGLEGERGLPDTAPQGPTLPSARDVSRESETSDPPARYDPTMKARIPRLKQLNFDGLEKNWVMFKNDFMTQVQTCGMMPALNDSRDIEIQGMDEDGMIEQGVAAEGVHVYRDLWGMLVGAISDETTKLMVYNSKGPSAAWRALEQTFTPLTGGEQISLIGKFFTARQERNPDPQVFFQQFKSTVTSLEFALGQLIPKMLVYARFLDALSSEYDVQKQQLLSERILEEEEMLRVLRTRVG 310          
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5L579_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L579_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 1.220e-86
Identity = 161/319 (50.47%), Postives = 206/319 (64.58%), Query Frame = 1
Query:  127 EEFATAIED------------VSAKMEALMMTMSQLVQGTAPTTGDGQESR------SGRHTAPGVDRGRIDHAPNTG----------GVQDRPQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYEIQKQQLLSQKSLETEEITRVLRTRAG 999
            EE  TAI+D            V  K+E +M ++S+LV G AP  G             G HT PG      +HAP+TG          G   R  +PS    G  +RE AH EQAA +    ++R PRL+QL+FDG E NW MF+N+F TQV  CGM   L DSRDI V G+ D+ ++ QG++  EI  Y+DLWV+L  AI++  TK++VF  +GP+AAWRALE  FSPLTGGEQISL+ KFF+A+Q   QDP  F+ +F S VT+LELAF+QPI KMLV+ARFL+AL PE+E+QKQ LL+QK+L+ EEI RVLRTRAG
Sbjct:   19 EELRTAIDDAVGDASTRLERMVEEKLEGIMDSLSRLVPG-APPAGSATAXXXXXXXXGGAHTLPGAGCS-TEHAPSTGRGLEGARGLLGPAPREHTPS---EGGISREGAHSEQAAWYATYSHARIPRLKQLSFDGHEKNWLMFKNEFTTQVQTCGMDRALNDSRDIVVQGVDDDGMVRQGVRREEIAMYRDLWVLLTEAISESATKIMVFGCKGPSAAWRALEETFSPLTGGEQISLMAKFFDAQQGKNQDPRVFFQEFKSIVTSLELAFEQPIPKMLVYARFLDALSPEFELQKQLLLAQKTLDEEEILRVLRTRAG 332          
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5K813_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K813_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 3.000e-82
Identity = 145/286 (50.70%), Postives = 188/286 (65.73%), Query Frame = 1
Query:  127 EEFATAIEDVSAKMEALMM--------TMSQLVQGTAPTT-----GDGQESRSGRHTAPGVDRGRIDHAPNTG-------GVQDR-PQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYE 921
            EE  TAI+  +AKME++M          +S+LV  TA        G   ESR G H  PG   GR+D AP TG       G+ D  PQ P+  S GD +RE+   +  A +   + +R PRL+QLNFDG E NW MF+NDF+TQV  CGMM  L DS+DI + GM D+ ++EQG+   E+  Y++LW MLVGAI+D TTK++V++ +GP+AAWRALE  F+PL GG+QISLIGKFF A+Q+  QDP  F+ QF STVT+LE A  QPI KMLV+ARFL+AL  EY+
Sbjct:   18 EEVMTAIDQATAKMESMMTEKLGTVMEALSRLVPETASAASMAAAGGRGESRGGTHAPPGA--GRVDQAPITGQGLEGERGLPDTAPQGPTLPSAGDVSRESETSDPPARYDPTMKARIPRLKQLNFDGLEKNWVMFKNDFMTQVQTCGMMHALNDSQDIEIQGMDDDGMIEQGVAAEEVHVYRELWGMLVGAISDETTKLMVYNSKGPSAAWRALEQTFTPLAGGKQISLIGKFFTARQERNQDPRVFFQQFKSTVTSLEFALGQPIPKMLVYARFLDALSSEYD 301          
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5KRJ2_9PHAE (eIF3g domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ2_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 2.340e-79
Identity = 149/297 (50.17%), Postives = 195/297 (65.66%), Query Frame = 1
Query:  154 VSAKMEALMMTMSQLVQGTAPT-----TGDGQESRSGRHTAPGVDRGRIDHAPNTG----------GVQDRPQSPSGSSVGDATREN-AHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYEIQKQQLLSQKSLETEEITRVLRTRA 996
            V+ KME +M T+ +LV G  P       G G ES    H  PG   G++D A NT           G + R  SP     G  +RE  +  EQA+ +    ++R  RL+QL+FDG + NW MF+NDF+TQV  CGM   L D RDI V G+ D+ ++EQG+++ EI  Y++LW ML GAI++ +TKM+V+  +GP+AAWR LE  F+P T GEQISLIGKF+NA+Q   QDP  F+ +F S VT LELAFDQ I  MLV+ARFL+AL PE+EIQKQQLL+QK+L+ +EI RVLRTRA
Sbjct:  107 VTEKMEGIMDTLPRLVPGAPPAGSATAAGGGGESLGRTHAFPGA--GQLDQASNTERGLEGARGLRGPEPREPSPP---EGAYSREGVSREEQASRYAFSSHARMSRLKQLDFDGDKKNWLMFRNDFITQVQTCGMGRALSDKRDIVVLGVDDDGMVEQGVEVGEIAMYRNLWGMLTGAISNISTKMLVYDRKGPSAAWRGLEETFTPSTRGEQISLIGKFYNAQQGKNQDPRVFFQEFQSVVTNLELAFDQRIHTMLVYARFLDALSPEFEIQKQQLLTQKTLDEKEILRVLRTRA 398          
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5JH27_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH27_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 7.200e-79
Identity = 155/312 (49.68%), Postives = 199/312 (63.78%), Query Frame = 1
Query:  127 EEFATAIEDVSAKMEALMM--------TMSQLVQGTAPT-----TGDGQESRSGRHTAPGVDRGRIDHAPNTG-------GVQDR-PQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYEIQKQQLLSQKSLETEEITRVLRTRAG 999
            EE  TA+++ +A+ME++M          +S+LV  T P       G G ESR GRH  PG   GR+D AP TG       G+ D  PQ P+  SVGD + ++A  +  A +   +N+R PRL+QLNFDG+E NW MF+NDF TQV  CGMM  L DSRDI + G  D+ ++EQG+   E+  Y+D+W MLVGAI+D TTK++V++ +GP+AAWRALE  F+PLTGGEQISLIG                          LELA DQPI KMLV+ARFL+AL  EY++QKQQLLS+K LE EE+ RVLRTRAG
Sbjct:   18 EELRTAVDEATARMESMMTEKLGTVMEALSRLVPETPPAGSTTGAGGGGESRGGRHAPPGA--GRVDQAPTTGQGLEGARGLPDTAPQGPTLPSVGDVSHDSATSDPPARYDPTMNARIPRLKQLNFDGQEKNWLMFKNDFTTQVQTCGMMHVLNDSRDIEIQGKDDDGMIEQGVAAEEVHVYRDVWGMLVGAISDETTKLMVYNSKGPSAAWRALEQTFTPLTGGEQISLIGN-------------------------LELARDQPIPKMLVYARFLDALSSEYDVQKQQLLSEKILEEEEMLRVLRTRAG 302          
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5JKA3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA3_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 2.080e-71
Identity = 137/292 (46.92%), Postives = 179/292 (61.30%), Query Frame = 1
Query:  127 EEFATAIEDVSAKMEALMM-TMSQLVQGTAPTTGDGQESRSGRHTAPGVDRGRIDHAPNTGGVQDRPQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLELAFDQPISKMLVHARFLEALLPEYEIQKQQLLSQKSLETEEITRVLRTRAG 999
            EE  TAI+  +AKME++M   +  ++Q  +P   +   SR+G                        PQ P+  S GD  RE+A  +  A +   + ++ PRL+QLNFDG+E NW MF+NDF+TQV  CGMM  L DSRDI + GM D+ ++EQG+   E+  Y+DLW MLVGAI+D TTK++V++ +GP+AAWRALE   +PLTGGEQISLIG                          LELA  QPI KMLV+ARFL+AL  EY++QKQQLLS+K LE EE+ RVLRTRAG
Sbjct:   18 EEVKTAIDQATAKMESMMTENVRAVMQALSPLVPE--TSRAGT-----------------------PQGPTLPSAGDVPRESATSDPRARYDPTMKAQIPRLKQLNFDGQEKNWLMFKNDFMTQVQTCGMMHALNDSRDIEIQGMGDDGMIEQGVAAEEVHVYRDLWGMLVGAISDETTKLMVYNSKGPSAAWRALEQTVTPLTGGEQISLIGN-------------------------LELALGQPIPKMLVYARFLDALSSEYDVQKQQLLSEKILEQEEMLRVLRTRAG 259          
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5L522_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L522_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 4.830e-58
Identity = 112/242 (46.28%), Postives = 145/242 (59.92%), Query Frame = 1
Query:  154 VSAKMEALMMTMSQLVQGTAPTTGDGQESR-----SGRHTAPGVDRGRIDHAPNTG----------GVQDRPQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTV 834
            V  K E +M ++S++V G  P               G H  PG     + HAP+TG          G   R  +PS    G  +RE AH EQAA +    ++R PRL+QL+FDG E NW MF+NDF TQV  CGM   L DSRDI V G+ D+ ++ QG++  EI  Y+DLWV+L  AI++  TK++VF  +GP+AAWRALE  FSPLTGGEQISL+ KFF+A+Q   QDP  FY +F S V
Sbjct:   40 VEEKSEGIMDSLSRVVPGAPPAGSXXXXXXXXXXXGGAHALPGAGF-LMGHAPSTGRGLEGARGLLGPAPREHTPS---EGGISREGAHSEQAAWYAIYSHARIPRLKQLSFDGHEKNWLMFKNDFTTQVQTCGMDRALNDSRDIVVQGVDDDGMVRQGVRREEIAMYRDLWVLLTEAISESATKIMVFGCKGPSAAWRALEETFSPLTGGEQISLMAKFFDAQQGKNQDPRVFYQEFKSIV 277          
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5K5X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X4_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 2.720e-56
Identity = 108/222 (48.65%), Postives = 142/222 (63.96%), Query Frame = 1
Query:  163 KMEALMMTMSQLVQGTAPTT-----GDGQESRSGRHTAPGVDRGRIDHAPNTG-------GVQDR-PQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAAAWRALESNFSPLTGGEQISLIGKFFNAKQKT 789
            K+  +M  +S+LV  TA        G   ESR GRH  P    GR+D AP  G       G+ D  PQ P+  S GD +RE+   +  A     + +R PRL+QLNFDG E NW MF+NDF+TQV  CGMM  L D RDI + GM D+ ++EQG+ + E+  Y+DL  ML GAI+D TTK++V++ +GP+AAWRALE  F+PLTGGEQISLIGKF+  K++T
Sbjct:    8 KLGTVMEALSRLVPETASAASMAAAGGRGESRGGRHAPPNA--GRVDQAPIIGQGLEGERGLPDTAPQGPTLPSAGDVSRESETSDPPARCDPTMKARIPRLKQLNFDGLEKNWVMFKNDFMTQVQTCGMMHALNDGRDIEIQGMDDDGMIEQGVAVEEVYVYRDLCGMLGGAISDETTKLMVYNSKGPSAAWRALEQTFTPLTGGEQISLIGKFYTDKRET 227          
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Match: A0A6H5KRQ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRQ4_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 6.500e-34
Identity = 82/173 (47.40%), Postives = 101/173 (58.38%), Query Frame = 1
Query:  163 KMEALMMTMSQLVQGTAPTTGD----GQESRSGRHTAPGVDRGRIDHAPNTG-GVQDR--------PQSPSGSSVGDATRENAHGEQAAHHVNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIYVHGMADEEILEQGLQMHEIGRYKDLWVMLVGA 642
            KME  M  +S+LV  T P  G     G ESR G H +PG   GR D APNTG GV+          PQ  S  S G+ +R+  + E  A +    ++R PRL+ LNFDG E NWPMFQN+F TQV  CGM   L DSRDI V G+ DE ++ QG++  EI  Y+DLW ML GA
Sbjct:   43 KMEGFMDALSRLVPETPPAAGTAAGGGGESREGMHASPGA--GREDQAPNTGRGVEGARGGLLGPVPQE-STPSEGNDSRDGMNSEHKARYTTTSHARIPRLKLLNFDGHEKNWPMFQNEFTTQVQTCGMTRALTDSRDIVVQGVDDEGMVGQGVKFDEISMYRDLWGMLTGA 212          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JN45_9PHAE6.570e-9154.45CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KFW3_9PHAE1.690e-8952.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L579_9PHAE1.220e-8650.47CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K813_9PHAE3.000e-8250.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRJ2_9PHAE2.340e-7950.17eIF3g domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JH27_9PHAE7.200e-7949.68DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JKA3_9PHAE2.080e-7146.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L522_9PHAE4.830e-5846.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5X4_9PHAE2.720e-5648.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRQ4_9PHAE6.500e-3447.40Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7contigF-serratus_M_contig7:794082..795080 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-05_006030.2
Exons1
Model size1001
Cds size903
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932134.2776866-UTR-F-serratus_M_contig7:794081..7941771622932134.2776866-UTR-F-serratus_M_contig7:794081..794177Fucus serratus maleUTRF-serratus_M_contig7 794082..794177 +
1690964164.4518132-UTR-F-serratus_M_contig7:794081..7941771690964164.4518132-UTR-F-serratus_M_contig7:794081..794177Fucus serratus maleUTRF-serratus_M_contig7 794082..794177 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932134.292675-CDS-F-serratus_M_contig7:794177..7950801622932134.292675-CDS-F-serratus_M_contig7:794177..795080Fucus serratus maleCDSF-serratus_M_contig7 794178..795080 +
1690964164.4637-CDS-F-serratus_M_contig7:794177..7950801690964164.4637-CDS-F-serratus_M_contig7:794177..795080Fucus serratus maleCDSF-serratus_M_contig7 794178..795080 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7.18137.1prot_F-serratus_M_contig7.18137.1Fucus serratus malepolypeptideF-serratus_M_contig7 794178..795080 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig7.18137.1

>prot_F-serratus_M_contig7.18137.1 ID=prot_F-serratus_M_contig7.18137.1|Name=mRNA_F-serratus_M_contig7.18137.1|organism=Fucus serratus male|type=polypeptide|length=301bp
MEASANVVSREEFATAIEDVSAKMEALMMTMSQLVQGTAPTTGDGQESRS
GRHTAPGVDRGRIDHAPNTGGVQDRPQSPSGSSVGDATRENAHGEQAAHH
VNPLNSRTPRLRQLNFDGREGNWPMFQNDFLTQVHACGMMSCLKDSRDIY
VHGMADEEILEQGLQMHEIGRYKDLWVMLVGAITDFTTKMIVFSHRGPAA
AWRALESNFSPLTGGEQISLIGKFFNAKQKTGQDPHAFYHQFNSTVTTLE
LAFDQPISKMLVHARFLEALLPEYEIQKQQLLSQKSLETEEITRVLRTRA
G
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mRNA from alignment at F-serratus_M_contig7:794082..795080+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig7.18137.1 ID=mRNA_F-serratus_M_contig7.18137.1|Name=mRNA_F-serratus_M_contig7.18137.1|organism=Fucus serratus male|type=mRNA|length=999bp|location=Sequence derived from alignment at F-serratus_M_contig7:794082..795080+ (Fucus serratus male)
ACTAAATCAAAATCTGGAACACTCTAGAGCTTTTCAGAGTTTCTAGAACT AACCGGTTAGTTCTCCAAGGCTTCGGACGAAAGGGCATCAGACATCATGG AAGCCTCTGCGAACGTCGTTAGCCGCGAGGAGTTCGCAACAGCCATTGAA GACGTCAGCGCGAAGATGGAGGCGCTGATGATGACCATGTCCCAATTAGT GCAAGGGACTGCGCCCACAACGGGCGACGGACAAGAGTCAAGGAGCGGGA GGCACACCGCCCCAGGTGTTGATCGGGGAAGGATCGATCACGCGCCAAAC ACCGGAGGAGTACAAGACCGGCCGCAAAGCCCATCCGGATCGTCTGTGGG GGACGCCACGCGTGAAAACGCCCATGGTGAGCAGGCAGCTCATCATGTAA ACCCCCTCAATAGCCGAACCCCCCGTCTCAGACAGTTGAATTTCGATGGT AGAGAGGGAAACTGGCCCATGTTCCAGAATGACTTCCTCACCCAAGTCCA TGCGTGTGGTATGATGAGTTGCCTGAAGGATTCTAGGGACATATACGTAC ATGGCATGGCTGACGAGGAAATTCTGGAGCAGGGACTACAGATGCATGAG ATAGGGAGATATAAGGACTTGTGGGTTATGCTCGTTGGAGCAATCACAGA TTTTACCACGAAAATGATAGTGTTTTCCCACAGGGGACCAGCGGCAGCTT GGCGTGCCCTAGAAAGCAACTTTTCCCCCCTGACTGGTGGTGAACAAATT TCCCTCATCGGGAAGTTTTTCAACGCGAAACAGAAAACGGGACAGGACCC CCACGCGTTTTACCATCAGTTCAACTCCACTGTAACTACCCTAGAATTGG CCTTTGACCAACCGATCTCCAAAATGCTGGTGCATGCACGCTTTCTCGAG GCCCTCTTACCCGAGTACGAGATCCAAAAGCAGCAGCTCCTAAGCCAAAA GTCGCTGGAGACAGAGGAGATTACGCGAGTTTTAAGGACTAGAGCGGGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig7:794082..795080+

>mRNA_F-serratus_M_contig7.18137.1 ID=mRNA_F-serratus_M_contig7.18137.1|Name=mRNA_F-serratus_M_contig7.18137.1|organism=Fucus serratus male|type=CDS|length=1806bp|location=Sequence derived from alignment at F-serratus_M_contig7:794082..795080+ (Fucus serratus male)
ATGGAAGCCTCTGCGAACGTCGTTAGCCGCGAGGAGTTCGCAACAGCCAT
TGAAGACGTCAGCGCGAAGATGGAGGCGCTGATGATGACCATGTCCCAAT
TAGTGCAAGGGACTGCGCCCACAACGGGCGACGGACAAGAGTCAAGGAGC
GGGAGGCACACCGCCCCAGGTGTTGATCGGGGAAGGATCGATCACGCGCC
AAACACCGGAGGAGTACAAGACCGGCCGCAAAGCCCATCCGGATCGTCTG
TGGGGGACGCCACGCGTGAAAACGCCCATGGTGAGCAGGCAGCTCATCAT
GTAAACCCCCTCAATAGCCGAACCCCCCGTCTCAGACAGTTGAATTTCGA
TGGTAGAGAGGGAAACTGGCCCATGTTCCAGAATGACTTCCTCACCCAAG
TCCATGCGTGTGGTATGATGAGTTGCCTGAAGGATTCTAGGGACATATAC
GTACATGGCATGGCTGACGAGGAAATTCTGGAGCAGGGACTACAGATGCA
TGAGATAGGGAGATATAAGGACTTGTGGGTTATGCTCGTTGGAGCAATCA
CAGATTTTACCACGAAAATGATAGTGTTTTCCCACAGGGGACCAGCGGCA
GCTTGGCGTGCCCTAGAAAGCAACTTTTCCCCCCTGACTGGTGGTGAACA
AATTTCCCTCATCGGGAAGTTTTTCAACGCGAAACAGAAAACGGGACAGG
ACCCCCACGCGTTTTACCATCAGTTCAACTCCACTGTAACTACCCTAGAA
TTGGCCTTTGACCAACCGATCTCCAAAATGCTGGTGCATGCACGCTTTCT
CGAGGCCCTCTTACCCGAGTACGAGATCCAAAAGCAGCAGCTCCTAAGCC
AAAAGTCGCTGGAGACAGAGGAGATTACGCGAGTTTTAAGGACTAGAGCG
GGGATGGAAGCCTCTGCGAACGTCGTTAGCCGCGAGGAGTTCGCAACAGC
CATTGAAGACGTCAGCGCGAAGATGGAGGCGCTGATGATGACCATGTCCC
AATTAGTGCAAGGGACTGCGCCCACAACGGGCGACGGACAAGAGTCAAGG
AGCGGGAGGCACACCGCCCCAGGTGTTGATCGGGGAAGGATCGATCACGC
GCCAAACACCGGAGGAGTACAAGACCGGCCGCAAAGCCCATCCGGATCGT
CTGTGGGGGACGCCACGCGTGAAAACGCCCATGGTGAGCAGGCAGCTCAT
CATGTAAACCCCCTCAATAGCCGAACCCCCCGTCTCAGACAGTTGAATTT
CGATGGTAGAGAGGGAAACTGGCCCATGTTCCAGAATGACTTCCTCACCC
AAGTCCATGCGTGTGGTATGATGAGTTGCCTGAAGGATTCTAGGGACATA
TACGTACATGGCATGGCTGACGAGGAAATTCTGGAGCAGGGACTACAGAT
GCATGAGATAGGGAGATATAAGGACTTGTGGGTTATGCTCGTTGGAGCAA
TCACAGATTTTACCACGAAAATGATAGTGTTTTCCCACAGGGGACCAGCG
GCAGCTTGGCGTGCCCTAGAAAGCAACTTTTCCCCCCTGACTGGTGGTGA
ACAAATTTCCCTCATCGGGAAGTTTTTCAACGCGAAACAGAAAACGGGAC
AGGACCCCCACGCGTTTTACCATCAGTTCAACTCCACTGTAACTACCCTA
GAATTGGCCTTTGACCAACCGATCTCCAAAATGCTGGTGCATGCACGCTT
TCTCGAGGCCCTCTTACCCGAGTACGAGATCCAAAAGCAGCAGCTCCTAA
GCCAAAAGTCGCTGGAGACAGAGGAGATTACGCGAGTTTTAAGGACTAGA
GCGGGG
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