mRNA_F-serratus_M_contig6997.18105.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6997.18105.1 vs. uniprot
Match: D8LRD5_ECTSI (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRD5_ECTSI) HSP 1 Score: 299 bits (765), Expect = 3.050e-98 Identity = 144/180 (80.00%), Postives = 159/180 (88.33%), Query Frame = 2
Query: 245 GCFPLHFDNPGPPNKRALTCLLYLNPHWKEGDGGEVCLTPFLEKELTIAPMLDRLVIFRSDRILHRVLPSNAERYMLTIWIDSPDVNSPAESTLRITKSQLEDWLGFCEFMRRSPVQRVLSRGVYEEQYERSLRDCMLGAEGFEEMLVGPPS--PGI---RVFYGIIQRLRQTAALAALS 769
GCFPLH+DNPGPPNKRALTCLLYLNP WKEGDGGEVCLTPFL+KE IAP+LDRLVIFRSDR+LHRVLP NAER+MLT+WIDSPDVN P ESTLRI++SQL+DWLGFCEF+R SPVQRVLSRGVYEEQYE+SLRDCM GAEG+EEML S G+ R +GII+RLRQTAALA LS
Sbjct: 145 GCFPLHYDNPGPPNKRALTCLLYLNPSWKEGDGGEVCLTPFLQKEEAIAPLLDRLVIFRSDRVLHRVLPCNAERFMLTVWIDSPDVNPPEESTLRISRSQLDDWLGFCEFLRNSPVQRVLSRGVYEEQYEQSLRDCMAGAEGYEEMLDAHRSLVSGLKKNRALHGIIERLRQTAALADLS 324
BLAST of mRNA_F-serratus_M_contig6997.18105.1 vs. uniprot
Match: A0A2D4CEY5_PYTIN (Fe2OG dioxygenase domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEY5_PYTIN) HSP 1 Score: 213 bits (542), Expect = 3.000e-64 Identity = 108/177 (61.02%), Postives = 127/177 (71.75%), Query Frame = 2
Query: 245 GCFPLHFDNPGPPNKRALTCLLYLNPHWKEGDGGEVCLTPFLEKELTIAPMLDRLVIFRSDRILHRVLPSNAERYMLTIWIDSPDVNSPAESTLRITKSQLEDWLGFCEFMRRSPVQRVLSRGVYEEQYERSLRDCMLGA-EGFEEMLVGPPS--PGIR---VFYGIIQRLRQTAAL 757
GCFP H+DNPG PNKR LTCLLYLN HW++GDGGEV L PFL +T+AP +DRLVIF SD +LHRVLPS+AERY LTIWID VN P +S LR+T + L DWLGF E +R SPVQR+LSRGVYE++Y SL CM A EGF EML + +R Y +IQRLR + L
Sbjct: 163 GCFPCHYDNPGAPNKRKLTCLLYLNDHWQKGDGGEVQLLPFLRAPVTVAPKMDRLVIFMSDWMLHRVLPSHAERYCLTIWIDGAHVNRPEDSQLRVTPADLADWLGFLERLRTSPVQRLLSRGVYEDEYAESLTQCMQHATEGFVEMLQSHETHLESLRRNVPLYNLIQRLRASREL 339
BLAST of mRNA_F-serratus_M_contig6997.18105.1 vs. uniprot
Match: H3H179_PHYRM (Fe2OG dioxygenase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H179_PHYRM) HSP 1 Score: 210 bits (535), Expect = 2.480e-63 Identity = 103/178 (57.87%), Postives = 128/178 (71.91%), Query Frame = 2
Query: 245 GCFPLHFDNPGPPNKRALTCLLYLNPHWKEGDGGEVCLTPFLEKELTIAPMLDRLVIFRSDRILHRVLPSNAERYMLTIWIDSPDVNSPAESTLRITKSQLEDWLGFCEFMRRSPVQRVLSRGVYEEQYERSLRDCM--LGAEGFEEMLVGPPSPGIRV-----FYGIIQRLRQTAAL 757
GCFP H+DNPG PNKR +TCLLYLN WKEGDGGEV L PFL++ +T+AP +DR+V+F+SD +LHRVLPS+AERY+LTIW+D VNSP +S LR+T+S L DW GF E +RRSPVQR+LSRGVYEE+Y SL +CM +G E+L + V Y I RLR A+
Sbjct: 151 GCFPCHYDNPGAPNKRKVTCLLYLNEGWKEGDGGEVQLFPFLQQPVTVAPKMDRVVLFQSDWMLHRVLPSHAERYVLTIWLDGAQVNSPEDSQLRLTQSDLADWFGFLERLRRSPVQRLLSRGVYEEEYYESLMECMQSTSTDGCVELLKSHETHLENVKRNAPLYNFINRLRDVRAM 328
BLAST of mRNA_F-serratus_M_contig6997.18105.1 vs. uniprot
Match: G5A9A1_PHYSP (Fe2OG dioxygenase domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5A9A1_PHYSP) HSP 1 Score: 209 bits (532), Expect = 6.990e-63 Identity = 102/178 (57.30%), Postives = 129/178 (72.47%), Query Frame = 2
Query: 245 GCFPLHFDNPGPPNKRALTCLLYLNPHWKEGDGGEVCLTPFLEKELTIAPMLDRLVIFRSDRILHRVLPSNAERYMLTIWIDSPDVNSPAESTLRITKSQLEDWLGFCEFMRRSPVQRVLSRGVYEEQYERSLRDCM--LGAEGFEEMLVGPPSPGIRV-----FYGIIQRLRQTAAL 757
GCFP H+DNPG PNKR +TCLLYLN WKEGDGGEV L PFL++ +T+AP +DR+V+F+SD +LHRVLPS+AERY+LTIW+D VN+P +S LR+T+S L DW GF + +RRSPVQR+LSRGVYEE+Y SL +CM EG E+L + V Y I+RLR A+
Sbjct: 151 GCFPCHYDNPGAPNKRKVTCLLYLNEGWKEGDGGEVQLFPFLQQPVTVAPKMDRVVLFQSDWMLHRVLPSHAERYVLTIWLDGAKVNAPEDSQLRLTQSDLADWFGFLDRLRRSPVQRLLSRGVYEEEYYESLMECMQSTSTEGCVELLKSHETHLENVKRNAPLYNFIKRLRDARAM 328
BLAST of mRNA_F-serratus_M_contig6997.18105.1 vs. uniprot
Match: D0N0G7_PHYIT (Fe2OG dioxygenase domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=D0N0G7_PHYIT) HSP 1 Score: 207 bits (527), Expect = 3.940e-62 Identity = 101/173 (58.38%), Postives = 127/173 (73.41%), Query Frame = 2
Query: 245 GCFPLHFDNPGPPNKRALTCLLYLNPHWKEGDGGEVCLTPFLEKELTIAPMLDRLVIFRSDRILHRVLPSNAERYMLTIWIDSPDVNSPAESTLRITKSQLEDWLGFCEFMRRSPVQRVLSRGVYEEQYERSLRDCM--LGAEGFEEMLVGPPSPGIRV-----FYGIIQRLR 742
GCFP H+DNPG PNKR +TCLLYLN WK+GDGGEV L PFL++ +T+AP +DR+V+F+SD +LHRVLPS AERY+LTIW+D VN+P +S L++T+S L DWLGF E +RRSPVQR+LSRGVYEE+Y SL +CM EG E+L + V Y I+RLR
Sbjct: 151 GCFPCHYDNPGAPNKRKVTCLLYLNEGWKQGDGGEVQLFPFLQQPVTVAPKMDRVVLFQSDWMLHRVLPSRAERYVLTIWLDGATVNTPEDSQLKLTQSDLADWLGFLERLRRSPVQRLLSRGVYEEEYYESLMECMQSTSTEGCVELLKSHETHLENVKRNIPLYNFIKRLR 323
BLAST of mRNA_F-serratus_M_contig6997.18105.1 vs. uniprot
Match: A0A6A3MY12_9STRA (Fe2OG dioxygenase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MY12_9STRA) HSP 1 Score: 207 bits (526), Expect = 5.120e-62 Identity = 102/178 (57.30%), Postives = 126/178 (70.79%), Query Frame = 2
Query: 245 GCFPLHFDNPGPPNKRALTCLLYLNPHWKEGDGGEVCLTPFLEKELTIAPMLDRLVIFRSDRILHRVLPSNAERYMLTIWIDSPDVNSPAESTLRITKSQLEDWLGFCEFMRRSPVQRVLSRGVYEEQYERSLRDCM--LGAEGFEEMLVGPPSPGIRV-----FYGIIQRLRQTAAL 757
GCFP H+DNPG PNKR LTCLLYLN W +GDGGEV L PFL+ +T+AP +DR+V+F+SD +LHRVLPS+AERY+LTIW+D VN+P +S LR+T+S L DW GF + +RRSPVQR+LSRGVYEE+Y SL CM EG E+L + V Y IQRLR A+
Sbjct: 148 GCFPCHYDNPGAPNKRKLTCLLYLNEGWTDGDGGEVQLFPFLQPPVTVAPKMDRVVLFQSDWMLHRVLPSHAERYVLTIWLDGAKVNAPEDSQLRLTQSDLADWFGFLDRLRRSPVQRLLSRGVYEEEYYESLMQCMQSTATEGCVELLKSHETHLENVKRNAPLYNFIQRLRDVRAM 325
BLAST of mRNA_F-serratus_M_contig6997.18105.1 vs. uniprot
Match: A0A3R7J6X3_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=4 Tax=Phytophthora TaxID=4783 RepID=A0A3R7J6X3_9STRA) HSP 1 Score: 215 bits (547), Expect = 9.000e-62 Identity = 106/178 (59.55%), Postives = 130/178 (73.03%), Query Frame = 2
Query: 245 GCFPLHFDNPGPPNKRALTCLLYLNPHWKEGDGGEVCLTPFLEKELTIAPMLDRLVIFRSDRILHRVLPSNAERYMLTIWIDSPDVNSPAESTLRITKSQLEDWLGFCEFMRRSPVQRVLSRGVYEEQYERSLRDCM--LGAEGFEEMLVGPPSPGIRV-----FYGIIQRLRQTAAL 757
GCFP H+DNPG PNKR +TCLLYLN WK+GDGGEV L PFL++ +T+AP +DR+V+F+SD +LHRVLPSNAERY+LTIW+D VNSP +S LR+T+S L DW GF E +RRSPVQR+LSRGVY E+Y SL +CM AEG E+L + V YG IQRLR A+
Sbjct: 500 GCFPCHYDNPGAPNKRKVTCLLYLNEGWKQGDGGEVQLLPFLQQPVTVAPKMDRVVLFQSDWMLHRVLPSNAERYVLTIWLDGARVNSPEDSQLRLTQSDLADWFGFLERLRRSPVQRLLSRGVYGEEYYESLMECMQSTAAEGCVELLKSHETHLENVKRNAPLYGFIQRLRDVRAM 677
BLAST of mRNA_F-serratus_M_contig6997.18105.1 vs. uniprot
Match: A0A8K1CEB9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEB9_PYTOL) HSP 1 Score: 206 bits (524), Expect = 1.050e-61 Identity = 99/148 (66.89%), Postives = 113/148 (76.35%), Query Frame = 2
Query: 245 GCFPLHFDNPGPPNKRALTCLLYLNPHWKEGDGGEVCLTPFLEKELTIAPMLDRLVIFRSDRILHRVLPSNAERYMLTIWIDSPDVNSPAESTLRITKSQLEDWLGFCEFMRRSPVQRVLSRGVYEEQYERSLRDCMLGA-EGFEEML 685
GCFP H+DNPG PN R LTCLLYLN WK GDGGEV L PFL +TIAP +DRLVIF SD +LHRVLP+NAERY LT+WID VN P ++ LRIT+ L DWLGF E +R+SP+QR+LSRGVYEE+Y SL CM A EGF EML
Sbjct: 148 GCFPCHYDNPGKPNMRKLTCLLYLNEGWKAGDGGEVQLLPFLRAPVTIAPKMDRLVIFMSDWMLHRVLPNNAERYCLTVWIDGSHVNLPQDTQLRITQDDLADWLGFLERLRKSPMQRLLSRGVYEEEYLESLTQCMATAPEGFPEML 295
BLAST of mRNA_F-serratus_M_contig6997.18105.1 vs. uniprot
Match: A0A662Y111_9STRA (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y111_9STRA) HSP 1 Score: 207 bits (526), Expect = 8.060e-61 Identity = 95/149 (63.76%), Postives = 118/149 (79.19%), Query Frame = 2
Query: 245 GCFPLHFDNPGPPNKRALTCLLYLNPHWKEGDGGEVCLTPFLEKELTIAPMLDRLVIFRSDRILHRVLPSNAERYMLTIWIDSPDVNSPAESTLRITKSQLEDWLGFCEFMRRSPVQRVLSRGVYEEQYERSLRDCM--LGAEGFEEML 685
GCFP H+DNPGPPNKR +TCLLYLN WK GDGGEV L PFL++ +T+AP +DR+V+F+SD +LHRVLPS+AERY+LTIW+D VN+P +S LR+T S L DW GF E +RRSPVQR+LSRGVYEE+Y SL +CM +G E+L
Sbjct: 253 GCFPCHYDNPGPPNKRKVTCLLYLNDGWKPGDGGEVQLLPFLQQPVTVAPKMDRVVLFQSDWMLHRVLPSHAERYVLTIWLDGARVNAPEDSQLRLTASDLADWFGFLERLRRSPVQRLLSRGVYEEEYYESLMECMQSTATDGCVELL 401
BLAST of mRNA_F-serratus_M_contig6997.18105.1 vs. uniprot
Match: A0A0P1B578_PLAHL (Protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B578_PLAHL) HSP 1 Score: 204 bits (518), Expect = 8.840e-61 Identity = 99/178 (55.62%), Postives = 125/178 (70.22%), Query Frame = 2
Query: 245 GCFPLHFDNPGPPNKRALTCLLYLNPHWKEGDGGEVCLTPFLEKELTIAPMLDRLVIFRSDRILHRVLPSNAERYMLTIWIDSPDVNSPAESTLRITKSQLEDWLGFCEFMRRSPVQRVLSRGVYEEQYERSLRDCM--LGAEGFEEMLVGPPSPGIRV-----FYGIIQRLRQTAAL 757
GCFP H+DNPG PNKR +TCLLYLN WK+GDGGEV L PFL++ +T+AP +DR+V+F+SD++LHRVLPS+ ERY+LTIW+D VN+P +S LR+ S L DW GF E +RRSP QR+LSRGVYEE+Y SL +CM AEG E+L + V Y I RLR +
Sbjct: 151 GCFPCHYDNPGAPNKRKVTCLLYLNESWKKGDGGEVQLFPFLQQAVTVAPKMDRVVLFQSDQMLHRVLPSHVERYVLTIWLDGKKVNAPEDSQLRLAPSDLADWFGFLERLRRSPKQRMLSRGVYEEEYYLSLMECMQSTSAEGCRELLKSHETHLENVKRNHPLYNFIMRLRDVRTM 328 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6997.18105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6997.18105.1 >prot_F-serratus_M_contig6997.18105.1 ID=prot_F-serratus_M_contig6997.18105.1|Name=mRNA_F-serratus_M_contig6997.18105.1|organism=Fucus serratus male|type=polypeptide|length=126bp MLDRLVIFRSDRILHRVLPSNAERYMLTIWIDSPDVNSPAESTLRITKSQback to top mRNA from alignment at F-serratus_M_contig6997:6197..8952- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6997.18105.1 ID=mRNA_F-serratus_M_contig6997.18105.1|Name=mRNA_F-serratus_M_contig6997.18105.1|organism=Fucus serratus male|type=mRNA|length=2756bp|location=Sequence derived from alignment at F-serratus_M_contig6997:6197..8952- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6997:6197..8952- >mRNA_F-serratus_M_contig6997.18105.1 ID=mRNA_F-serratus_M_contig6997.18105.1|Name=mRNA_F-serratus_M_contig6997.18105.1|organism=Fucus serratus male|type=CDS|length=756bp|location=Sequence derived from alignment at F-serratus_M_contig6997:6197..8952- (Fucus serratus male)back to top |