mRNA_F-serratus_M_contig698.18082.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig698.18082.1
Unique NamemRNA_F-serratus_M_contig698.18082.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig698.18082.1 vs. uniprot
Match: D7G6E1_ECTSI (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6E1_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 4.860e-114
Identity = 183/217 (84.33%), Postives = 199/217 (91.71%), Query Frame = 1 
Query:   67 MVFYFTTSDGHMVFMGKDKFENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKVKELDPELLVECCSLVKANSIEGCKKKEVRVVYTRWQNLKKLASYEVGQVGFKDESRVFRCRVEKSNVIVNALNRTKREEHPDLPALQEERAKEHRRWAQKTARKKLEEEEXXXXXXXXXXKRLRSYDSLFDESKMASSADVAATEDASASIAFEDDFMVRR 717
            MVFYFT+SDGHM++MGKDK+ENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEK+KELDP LLVECC+LVKANSIEGCK+KEV VVYTRWQNL+K ASYE GQVG+KDESRVF+CRVEK+N IVNALNRTKREEHP+L  LQEERAKEHRR  QK  RKK     XXXXXXXXXX  LRSYD+LF+ESKMAS+ADVAATEDASASIAFEDDFMVR+
Sbjct:    1 MVFYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRR-EQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFMVRQ 216
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BLAST of mRNA_F-serratus_M_contig698.18082.1 vs. uniprot
Match: A0A835Z4I1_9STRA (NFACT-R_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I1_9STRA)

HSP 1 Score: 277 bits (708), Expect = 1.890e-91
Identity = 145/217 (66.82%), Postives = 172/217 (79.26%), Query Frame = 1 
Query:   70 VFYFTTSDGHMVFMGKDKFENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKVKELDPELLVECCSLVKANSIEGCKKKEVRVVYTRWQNLKKLASYEVGQVGFKDESRVFRCRVEKSNVIVNALNRTKREEHPDLPALQEERAKEHRRWAQKTARKKLEEEEXXXXXXXXXXKRLRSYDSLFDESKMASSADVA----ATEDASASIAFEDDFM 708
            +++FT S GH ++MGKDK+ENEDLIRYG PEDVWFHVDNLSSAHVYLRMN+GEK+KE+ PE+++ECC LVKANSIEGCKKK+V VVYTRW NL+K  S E GQVGFKDES+V + RVEK+N IVNALNR+K E  PDL ALQEERA E RR  QK  RK+ E+ E          KR+RSYDSLFDE KMA S +V+    A+ED S+++AFEDDFM
Sbjct:    1 MYFFTASSGHTLYMGKDKYENEDLIRYGLPEDVWFHVDNLSSAHVYLRMNKGEKLKEVLPEVIMECCQLVKANSIEGCKKKDVEVVYTRWMNLRKSNSMEAGQVGFKDESKVHKVRVEKNNAIVNALNRSKTEASPDLQALQEERAAEIRR-EQKAVRKQQEQAEKIARRQAEEDKRMRSYDSLFDEGKMAGSTNVSNPYGASEDQSSAVAFEDDFM 216
[Close]
BLAST of mRNA_F-serratus_M_contig698.18082.1 vs. uniprot
Match: A0A6H5KW36_9PHAE (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW36_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 2.420e-75
Identity = 138/165 (83.64%), Postives = 149/165 (90.30%), Query Frame = 1 
Query:  214 MNRGEKVKELDPELLVECCSLVKANSIEGCKKKEVRVVYTRWQNLKKLASYEVGQVGFKDESRVFRCRVEKSNVIVNALNRTKREEHPDLPALQEERAKEHRRWAQKTARKKLEEEEXXXXXXXXXXKRLRSYDSLFDESKMASSADVAATEDASASIAFEDDFM 708
            MNRGEK+KELDP LLVECC+LVKANSIEGCK+KEV VVYTRWQNL+K ASYE GQVG+KDESRVF+CRVEK+N IVNALNRTKREEHP+L  LQEERAKEHRR  QK  RKK E   XXXXXXXXXX RLRSYD+LF+ESKMAS+ADVAATEDASASIAFEDDFM
Sbjct:    1 MNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRR-EQKALRKKKEXXXXXXXXXXXXXXRLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 164
[Close]
BLAST of mRNA_F-serratus_M_contig698.18082.1 vs. uniprot
Match: B8C9M3_THAPS (NFACT-R_1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9M3_THAPS)

HSP 1 Score: 194 bits (494), Expect = 6.310e-59
Identity = 116/228 (50.88%), Postives = 148/228 (64.91%), Query Frame = 1 
Query:   67 MVFYFTTSDG-HMVFMGKDKFENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKVKELDPELLVECCSLVKANSIEGCKKKEVRVVYTRWQNLKKLAS-------YEVGQVGFKDESRVFRCRVEKSNVIVNALNRTKREEHPDLPALQEERAKE------HRRWAQKTARKKLEEEEXXXXXXXXXXKRLRSYDSLFDESKMASSADVAATEDASASIAFEDDFM 708
            MV+YFTT  G + ++MGKDK+ENEDLI+YG PED WFHVD+LSSAHVYLR+  G  + ++  + L +CC+LVKANSI+GCKK  V VVYTRW+NLKK +S          GQVGF     V R  +EK+N IVN LN+TK E+HP+L   Q++R KE       +R A   A K+LEE E          K  RSYD +  E  M S+A+  AT D++A+  FEDDFM
Sbjct:    1 MVYYFTTRCGNYTIYMGKDKYENEDLIKYGHPEDCWFHVDDLSSAHVYLRLKPGMTLDDIPEDCLTDCCALVKANSIQGCKKSSVYVVYTRWKNLKKASSTCQDTSDMVDGQVGFHRPDNVRRTNIEKNNPIVNQLNKTKEEKHPNLAKQQQDRMKEIQTELKEKRKADDKA-KRLEELERARI------KEERSYDRIMGEHNMTSNAERNATADSTAAEEFEDDFM 221
[Close]
BLAST of mRNA_F-serratus_M_contig698.18082.1 vs. uniprot
Match: D0N3D3_PHYIT (NFACT-R_1 domain-containing protein n=29 Tax=Phytophthora TaxID=4783 RepID=D0N3D3_PHYIT)

HSP 1 Score: 193 bits (491), Expect = 1.490e-58
Identity = 114/217 (52.53%), Postives = 143/217 (65.90%), Query Frame = 1 
Query:   67 MVFYFTTSDGHMVFMGKDKFENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGE-KVKELDPELLVECCSLVKANSIEGCKKKEVRVVYTRWQNLKKLASYEVGQVGFKDESRVFRCRVEKSNV-IVNALNRTKREEHPDLPALQEERAKEHRRWAQ-KTARKKLEEEEXXXXXXXXXXKRLRSYDSLFDESKMASSADVAATEDASASIAFEDDFM 708
            MVFYFT+S+GH ++MGKDKFENEDLIRYGF ED+WFHVD+LSSAHVYLR+  G+ KV ++    L EC  LVK NSIEG KKK V V YTRW+NLKK  S E+GQVGF    RV   +VE+ N  I+ +LN+TK+E HPDL   +E R +E    A+ K  R +LE E+          K LRSY +L     + S   + A  D S+  A+E+DFM
Sbjct:    1 MVFYFTSSEGHTIYMGKDKFENEDLIRYGFMEDIWFHVDDLSSAHVYLRLPLGQTKVDDVSETCLEECAQLVKENSIEGSKKKSVSVCYTRWRNLKKTPSMEIGQVGFNHPERVRHYKVEEKNKDIIKSLNKTKQEFHPDLE--EEHRQRELLYKAERKKQRLQLEAEQRKAKMEFKQQKDLRSYSTLMSRDNIESGDKLDAAADLSSVNAYEEDFM 215
[Close]
BLAST of mRNA_F-serratus_M_contig698.18082.1 vs. uniprot
Match: A0A2D4BG70_PYTIN (Coiled-coil domain-containing protein 25, variant 2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG70_PYTIN)

HSP 1 Score: 192 bits (488), Expect = 4.220e-58
Identity = 109/216 (50.46%), Postives = 144/216 (66.67%), Query Frame = 1 
Query:   67 MVFYFTTSDGHMVFMGKDKFENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEK-VKELDPELLVECCSLVKANSIEGCKKKEVRVVYTRWQNLKKLASYEVGQVGFKDESRVFRCRVEKSNV-IVNALNRTKREEHPDLPALQEERAKEHRRWAQKTARKKLEEEEXXXXXXXXXXKRLRSYDSLFDESKMASSADVAATEDASASIAFEDDFM 708
            MVFYFT+S+GH ++MGKDKFENEDLIRYGF ED+WFHVD+LSSAHVYLR+  G+  + ++    L EC  LVK NSIEGCKKK V+V+YT+W+NLKK  S EVGQVGF    RV    VE+ N  I+ ALN++K E +PDL   + +R   ++   +K  R+++E +E          K LRSY +L     + S   V A+ D S+  A+E+DFM
Sbjct:    1 MVFYFTSSEGHTIYMGKDKFENEDLIRYGFLEDIWFHVDDLSSAHVYLRLPIGKSALDDISETCLEECAQLVKENSIEGCKKKSVKVIYTKWRNLKKTPSMEVGQVGFNHPERVRTYVVEEKNKDILKALNKSKVESYPDLEEERRQRELLYKA-ERKKQRQQIELQERKAREEFKKQKELRSYSTLLTRDNIESGEKVVASADLSSVNAYEEDFM 215
[Close]
BLAST of mRNA_F-serratus_M_contig698.18082.1 vs. uniprot
Match: A0A4D9D3G1_9STRA (NFACT-R_1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3G1_9STRA)

HSP 1 Score: 190 bits (482), Expect = 7.690e-58
Identity = 109/169 (64.50%), Postives = 131/169 (77.51%), Query Frame = 1 
Query:  109 MGKDKFENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKVKELDPELLVECCSLVKANSIEGCKKKEVRVVYTRWQNLKKLASYEVGQVGFKDESRVFRCRVEKSNVIVNALNRTKREEHPDLPALQEERAKEHRRWAQKTARKKLEEEEXXXXXXXXXXKRLRSYD 615
            MGKDK+ENE+LIR+G PEDVWFHVD LSSAHVYLR   G+K+ ++  +LL+EC SLVKANSIEGCK KEV+VVYTRW+NLKK  S E GQ+GF D S+V   +V+K N IVNALN+TK E  PDL A QE RA E+R  AQK +++  E   XXXXXXXXX  +LRSY+
Sbjct:    1 MGKDKYENEELIRFGLPEDVWFHVDELSSAHVYLRQKPGQKLDDISSDLLLECSSLVKANSIEGCKMKEVKVVYTRWRNLKKTKSMEAGQIGFHDPSKVRTIKVQKCNSIVNALNKTKEERFPDLQAEQEARAVEYRA-AQKASKRDQEXXXXXXXXXXXXEAKLRSYE 168
[Close]
BLAST of mRNA_F-serratus_M_contig698.18082.1 vs. uniprot
Match: A0A6U6DJ37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DJ37_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.330e-57
Identity = 116/214 (54.21%), Postives = 150/214 (70.09%), Query Frame = 1 
Query:   67 MVFYFTTSDGH-MVFMGKDKFENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKVKELDPELLVECCSLVKANSIEGCKKKEVRVVYTRWQNLKKLASYEVGQVGFKDESRVFRCRVEKSNVIVNALNRTKREEHPDLPALQEERAKEHRRWAQKTARKKLEEEEXXXXXXXXXXKRLRSYDSLFDESKMASSADVAATEDASASIAFEDDF 705
            MVFYF+T  G+ M++MGKDK+ENEDLI++G PEDVWFHVD+LSSAHVYLRM  G  + ++ P+ ++EC +LVKANSI+GCK K V VVYTRW+NLKK +    GQVGF     V R  VEK N IVNALN+TK E HPDL   Q++R +E +   +           XXXXXXXXX +RL SY+ +  +  M S+A+  AT DA+A+  +E+DF
Sbjct:    1 MVFYFSTRCGNFMLYMGKDKYENEDLIKFGQPEDVWFHVDDLSSAHVYLRMKPGMTLSDIPPDAILECAALVKANSIQGCKMKSVYVVYTRWKNLKKTSQMVDGQVGFHRPENVKRMEVEKHNPIVNALNKTKEERHPDLYKEQQDRLREIQEEKKANXXXXXXXXXXXXXXXXXXKERL-SYNRIMKDDNMTSNAERTATADATAAEEYEEDF 213
[Close]
BLAST of mRNA_F-serratus_M_contig698.18082.1 vs. uniprot
Match: K3WKA0_GLOUD (NFACT-R_1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKA0_GLOUD)

HSP 1 Score: 189 bits (481), Expect = 4.820e-57
Identity = 112/218 (51.38%), Postives = 144/218 (66.06%), Query Frame = 1 
Query:   67 MVFYFTTSDGHMVFMGKDKFENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEK-VKELDPELLVECCSLVKANSIEGCKKKEVRVVYTRWQNLKKLASYEVGQVGFKDESRVFRCRV-EKSNVIVNALNRTKREEHPDLPALQEERAKEHRRWA--QKTARKKLEEEEXXXXXXXXXXKRLRSYDSLFDESKMASSADVAATEDASASIAFEDDFM 708
            MVFY T+S+GH ++MGKDKFENEDLIRYGF ED+WFHVD+LSSAHVYLR+  G+  + ++    L EC  LVK NSIEG KKK V VVYT+W+NLKK  S EVGQVGF    RV    V EK+  I+ ALN+TK E++PDL   +EER K+   +   +K  R+++E  E          K LRSY +L    K+ S+  V A+ D S+   +E+DFM
Sbjct:    1 MVFYLTSSEGHTIYMGKDKFENEDLIRYGFLEDIWFHVDDLSSAHVYLRLPMGKSALDDISETCLEECAQLVKENSIEGSKKKSVNVVYTKWRNLKKTQSMEVGQVGFNHPERVRTYAVAEKNRDILKALNKTKLEKYPDL---EEERRKQELLYKVERKKQRQQVEFAEKKAREEYKQQKELRSYSTLMSRDKIESANKVVASADLSSVNEYEEDFM 215
[Close]
BLAST of mRNA_F-serratus_M_contig698.18082.1 vs. uniprot
Match: K0TEU7_THAOC (NFACT-R_1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEU7_THAOC)

HSP 1 Score: 189 bits (479), Expect = 9.380e-57
Identity = 110/218 (50.46%), Postives = 147/218 (67.43%), Query Frame = 1 
Query:   67 MVFYFTTSDG-HMVFMGKDKFENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKVKELDPELLVECCSLVKANSIEGCKKKEVRVVYTRWQNLKKLASYEVGQVGFKDESRVFRCRVEKSNVIVNALNRTKREEHPDLPALQEERAKEHRRWAQKTARKKLEEEEXXXXXXXXXXKRL---RSYDSLFDESKMASSADVAATEDASASIAFEDDFM 708
            MV+YFT+  G + ++MGKDK ENE LI+YG PEDVWFHVD+LSSAHVYLR+  G+ + ++  E L++CCSL KANSI+GCKK  V +VYTRW+NLKK +    GQVG+   + V R + EK+N +V  L +TK+E  PDL   Q  R +E     Q+  +  +  E      XXXXX RL   RSY+ +F + KM S+AD+ AT D SA++ +EDDFM
Sbjct:    1 MVYYFTSRCGAYTIYMGKDKHENETLIKYGLPEDVWFHVDDLSSAHVYLRLKPGQTLDDIPEEALIDCCSLCKANSIQGCKKSTVYIVYTRWKNLKKTSGMVDGQVGYHRPNNVRRRQTEKNNPVVRQLEKTKKELFPDLAQEQAARMRE----IQELKKAHMRAEAKAKKLXXXXXXRLKEERSYERIFSQDKMTSNADMNATVDDSAAVDYEDDFM 214
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig698.18082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6E1_ECTSI4.860e-11484.33NFACT-R_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z4I1_9STRA1.890e-9166.82NFACT-R_1 domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5KW36_9PHAE2.420e-7583.64NFACT-R_1 domain-containing protein n=1 Tax=Ectoca... [more]
B8C9M3_THAPS6.310e-5950.88NFACT-R_1 domain-containing protein n=1 Tax=Thalas... [more]
D0N3D3_PHYIT1.490e-5852.53NFACT-R_1 domain-containing protein n=29 Tax=Phyto... [more]
A0A2D4BG70_PYTIN4.220e-5850.46Coiled-coil domain-containing protein 25, variant ... [more]
A0A4D9D3G1_9STRA7.690e-5864.50NFACT-R_1 domain-containing protein n=1 Tax=Nannoc... [more]
A0A6U6DJ37_9STRA2.330e-5754.21Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
K3WKA0_GLOUD4.820e-5751.38NFACT-R_1 domain-containing protein n=1 Tax=Globis... [more]
K0TEU7_THAOC9.380e-5750.46NFACT-R_1 domain-containing protein n=1 Tax=Thalas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig698contigF-serratus_M_contig698:12870..19436 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score337.0
Seed ortholog evalue7e-90
Seed eggNOG ortholog2880.D7G6E1
Preferred nameCCDC25
KEGG koko:K04989
KEGG TC1.A.5.1.2
KEGG Pathwayko04742,map04742
Hectar predicted targeting categorymitochondrion
GOsGO:0001581,GO:0003008,GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0007600,GO:0007606,GO:0008150,GO:0008324,GO:0009268,GO:0009581,GO:0009582,GO:0009593,GO:0009605,GO:0009612,GO:0009628,GO:0009987,GO:0010447,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0032501,GO:0032991,GO:0034220,GO:0034702,GO:0034703,GO:0042221,GO:0043235,GO:0044424,GO:0044425,GO:0044464,GO:0046873,GO:0050877,GO:0050896,GO:0050906,GO:0050907,GO:0050909,GO:0050912,GO:0050915,GO:0050982,GO:0051179,GO:0051234,GO:0051606,GO:0051716,GO:0055085,GO:0070588,GO:0070838,GO:0071214,GO:0071467,GO:0071468,GO:0071944,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0104004,GO:1902495,GO:1990351
EggNOG free text desc.Domain of unknown function (DUF814)
EggNOG OGsKOG3272@1,KOG3272@2759
Ec32 ortholog descriptionDomain of unknown function DUF814
Ec32 orthologEc-10_001520.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Exons7
Model size717
Cds size717
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932127.4089565-CDS-F-serratus_M_contig698:12869..129601622932127.4089565-CDS-F-serratus_M_contig698:12869..12960Fucus serratus maleCDSF-serratus_M_contig698 12870..12960 +
1690964161.1230397-CDS-F-serratus_M_contig698:12869..129601690964161.1230397-CDS-F-serratus_M_contig698:12869..12960Fucus serratus maleCDSF-serratus_M_contig698 12870..12960 +
1622932127.4263248-CDS-F-serratus_M_contig698:16124..162641622932127.4263248-CDS-F-serratus_M_contig698:16124..16264Fucus serratus maleCDSF-serratus_M_contig698 16125..16264 +
1690964161.135233-CDS-F-serratus_M_contig698:16124..162641690964161.135233-CDS-F-serratus_M_contig698:16124..16264Fucus serratus maleCDSF-serratus_M_contig698 16125..16264 +
1622932127.4434876-CDS-F-serratus_M_contig698:16416..164671622932127.4434876-CDS-F-serratus_M_contig698:16416..16467Fucus serratus maleCDSF-serratus_M_contig698 16417..16467 +
1690964161.1464262-CDS-F-serratus_M_contig698:16416..164671690964161.1464262-CDS-F-serratus_M_contig698:16416..16467Fucus serratus maleCDSF-serratus_M_contig698 16417..16467 +
1622932127.4628396-CDS-F-serratus_M_contig698:16847..169431622932127.4628396-CDS-F-serratus_M_contig698:16847..16943Fucus serratus maleCDSF-serratus_M_contig698 16848..16943 +
1690964161.1572871-CDS-F-serratus_M_contig698:16847..169431690964161.1572871-CDS-F-serratus_M_contig698:16847..16943Fucus serratus maleCDSF-serratus_M_contig698 16848..16943 +
1622932127.4764059-CDS-F-serratus_M_contig698:17369..175151622932127.4764059-CDS-F-serratus_M_contig698:17369..17515Fucus serratus maleCDSF-serratus_M_contig698 17370..17515 +
1690964161.1734972-CDS-F-serratus_M_contig698:17369..175151690964161.1734972-CDS-F-serratus_M_contig698:17369..17515Fucus serratus maleCDSF-serratus_M_contig698 17370..17515 +
1622932127.489441-CDS-F-serratus_M_contig698:17781..178421622932127.489441-CDS-F-serratus_M_contig698:17781..17842Fucus serratus maleCDSF-serratus_M_contig698 17782..17842 +
1690964161.1832838-CDS-F-serratus_M_contig698:17781..178421690964161.1832838-CDS-F-serratus_M_contig698:17781..17842Fucus serratus maleCDSF-serratus_M_contig698 17782..17842 +
1622932127.507388-CDS-F-serratus_M_contig698:19304..194361622932127.507388-CDS-F-serratus_M_contig698:19304..19436Fucus serratus maleCDSF-serratus_M_contig698 19305..19436 +
1690964161.1914334-CDS-F-serratus_M_contig698:19304..194361690964161.1914334-CDS-F-serratus_M_contig698:19304..19436Fucus serratus maleCDSF-serratus_M_contig698 19305..19436 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig698.18082.1prot_F-serratus_M_contig698.18082.1Fucus serratus malepolypeptideF-serratus_M_contig698 12870..19436 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig698.18082.1

>prot_F-serratus_M_contig698.18082.1 ID=prot_F-serratus_M_contig698.18082.1|Name=mRNA_F-serratus_M_contig698.18082.1|organism=Fucus serratus male|type=polypeptide|length=239bp
LGLGSFAFIPRRLRQAVAHPRTMVFYFTTSDGHMVFMGKDKFENEDLIRY
GFPEDVWFHVDNLSSAHVYLRMNRGEKVKELDPELLVECCSLVKANSIEG
CKKKEVRVVYTRWQNLKKLASYEVGQVGFKDESRVFRCRVEKSNVIVNAL
NRTKREEHPDLPALQEERAKEHRRWAQKTARKKLEEEEKIARRKQEEDKR
LRSYDSLFDESKMASSADVAATEDASASIAFEDDFMVRR
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mRNA from alignment at F-serratus_M_contig698:12870..19436+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig698.18082.1 ID=mRNA_F-serratus_M_contig698.18082.1|Name=mRNA_F-serratus_M_contig698.18082.1|organism=Fucus serratus male|type=mRNA|length=6567bp|location=Sequence derived from alignment at F-serratus_M_contig698:12870..19436+ (Fucus serratus male)
CTTGGCTTGGGCAGCTTCGCTTTCATCCCACGCCGGCTACGTCAAGCTGT
AGCGCATCCGAGGACGATGGTTTTCTACTTCACGACCAGCGGTAAGGTGT
AAGGTGTAAGGTGTAAGGTGGTTTTGCGCTTCTGTCGAATGTGTTGTGCC
GCTGCTTGCCAAGTTAATACGAAAACGTGCGGCGGTGTAAATACATTTCA
ACTCAATAGTCTACTACAGCAGCAGTACAGCATCCATGCACTTGGTTGTT
TATTCAAGTACGTACAGCACGAGGAGAAAATACGAACCCGTTAAAATTAT
CCGACCATCCACACCTTCCGTTAATTTATACTTCGGAGTAGGTAATTTAT
GGGGGAATTTGAACTGAAACATTTGCTTGAGATTAAACTCGGCCGTTACA
GAGTAGGAAGAGAGCTTTATATGGGTTTTTGTGGGGTTCCCCGATGAGAG
TCGCCTACTTGAACAAAGTATTTCTTTTTATCAAATACAATTTGTACCAT
TCCTTGTCTTCTAGATATTACAAACCCATTTTATTATGTACTAAAACTAA
TTTTGGTTTGGTTTTGTCTGGTGTCCCTGCATGGCGATTAACCCTTCTGG
CCCTGACTACTCACCTTCCGACAGACCTGAAGAAAATCCCAAGGAAAAAA
AAATCGTTTGAGAGACATGTCGAGCAAGAGAAGTGCACCAAAAAACAAGT
GTATTTATTTAGTCGGTAGCTTTACGATCTCGGCCAAGGGGGCGAGACGG
CGGCCCGCGACAGGCTGGTGACGTCTCTCAGGGTAAAAGAAGGGTTGTGG
AGTGGTTGTGCTGTCGCAGACAGAGGTTGTTAGGCGTTCAGCCCTAGATG
TTCCATGCATGCCATAAGTCTATTTTGAACATATTCTCAAATGATCAGTA
CAGCGGTTCAAATGATCAGTGAGCGCGCTTTGAAGGGCCAGACTGACAAA
CTGTACTTCTGTACTTCTCTGGCCCCGCCAAATGTGATCCCTTCGGACTC
ACTAGCGCTTCTTCTTTTACAAGCACAACAACAGCCTATGTTCCCACCTA
AACGTTTTGACATTTCCCCCCCCCTGATTGGGGGATGCCCAGAAGGTATA
GGCGCGTTCGAGTGAACATGGATTGGCCTCCGGGGTCCAGGCATGCTCTC
TAAAAGAGTAGTATGCATCAATAACCATAAACTTGGGTTCGTTGTAAAGA
TGAAGCGTAGACAAAGCTGATGTAAAAAAAAAGAAAAAAGAAAAAAAGAA
GAAAAAAAGAACATTTTTTCAATCAAAATAATCAGTAAAAATATTCCCAA
TTTACGACGACGGTGACACGTTAAAACGGGTGTGGCAAAGCCTCTTCAAG
GTTTACAACCAAATACTCCGTCAGATGGGCCATAACGACTTTAGTGTGGA
GCATACCGGGGTGAGGGTGCGGCAGATGGCGGGGACGTTGAAAAGAGTGG
GTGGTCTTCCAAAAGGCTTGGGACTTTCTGGCGTCCAGCGACGACGAAGA
CATTTTATTTTTTTATTTTTGTCGAATTGACTGTTTTTTTGCAGCCGTTT
GCCCATGCAGGGTAATGAGCTTAGAAAAAAAAGTTTCAACTATAAAAACG
TCAAAGATTTCGAAAAAATCATCGCCGAGGGCATCGGACACGGGCAAGGG
CTCCTATAAACATAACACCCCAGACTTATGGGACAGAGGAAGTATATAGC
TTGTACGGGTTGTTCTGGCTCACAGATGTGGGCTCCACCATTGCTTGTGT
GCTGTAGAACGGCGCGGTTGCTGTAATTCGTGTTCAGTATGATGAGGTTC
GGAGGATGTGATTCGTTCGTCGCTCCTGATATTATACAGGATTTGTTTTC
CATGGTATCGAGGCAGCAAATTTTGAGCATGCGTATGGGTTCAAAGGTTT
TGTCCCAAGTATGGGTGTGAGGTGCCAGCCCGGGCAATGGACGTGCTAAT
GAAACGACTCCCCTTTTTATATATTCTTGAGTTGAGTGTCTTTTGTTGTC
CCTCTTTGCAGGCACAGACAGCGTTGCTCTGTGGTGCAGTACAACTCCTT
GCATGTGGGAGTTCGGGTATTTTTAAAAAATCCCCTACACGACTAGACCG
GGCTAAACAAAAATAATAATAAAAACATGATGAGTGAAATAATCAATAAA
CACACGTGAAGGCTCAGAATGGTTAATGTAAGTGTACAGCATAACTGTGG
GTTTATCTCCCGGTATTATACTATACTGTTGACCCAATGTTACTACCATC
GGGGAACCCGTTTAAATACCATGACGAGGGTTAGTATTTGCAGCCTATGA
TCCCACCTCCATCCGTTTTTTTTGCCCAATGTAACAGATTGAGCTGCATC
CTAGCTTATCCTGCCTTTTGTAATTGTTGTGTTTTGGTGTCCCTGCCTGG
AGATTAATTTGAACAGGACAGTAATGCCATGAAGAGGTTGTATTTTTAGC
TCATGACGGGTCGATGCGCTATTATTACTAACTGTATATAGTTATAAACC
TATTTCATTATGTACTCAAAATGTTTTCGTTTTATTTTTGTCTGGTGTCC
CTGCATGGCGATGAATGTGAGTGTACAGCATCATGATGGGTTTCTGCCCG
GTATTGTACTGTTGACCCAATGTTACTACCATCGGGAACCCGTTTCAATG
CCATGAAGAGGTTTTTTATTTGCAGCCTATGATCCCACCTAAACGTTTTG
ACATTTTCCTCTCTGACTGGGGGATGCTCAGAAGGTCTATGTAGATGCGT
TCAGATTTTTCTTTAAAGTCAAGTCAAATCGTCAAGAGTCAAGCAACACA
TACTATTAATAATGATATTTTAATGGTCAAGTCGTCAAAACGTCGATATA
TATAGGGATGATGATGATGATGCTAAAAAGGTCTACCTGGTAGATGCGTT
CAGATTTTTCTTTAGAGGCACAACAACCCTACCCGTACAACCTGATTTTG
TAGTATAATATTCAATACCGGTATTGCATAACTACTACCAGTAGTGTTTT
GTCTGTGCTAATATAAGTGTAGCTTAGCTCGGCATACAGTAGTTGTACTC
AACTCAATGTTACTCGTGACTTGGCTTGCCACAGCATCAATACGTTTTGT
GCCTGGAACGCTCCCGCAGTGCAATTTGACTATGATACACCCCAAGGATT
CGAAAACACAAGCTGCGCAAGTACCGTTCGCCATTGTTTTTGTAAGTAAA
TTCAAAATGATCTCGTCGGTTTCTCCCAATCGTCGCGCTGGCTCTGTTCG
ACAAGACGGGCACATGGTGTTCATGGGCAAAGACAAGTTCGAGAATGAAG
ACCTTATCCGTTATGGCTTCCCCGAAGACGTGTGGTTTCACGTGGACAAC
TTGAGCTCGGCGCACGTCTACCTCCGCATGAACCGCGGCGAAAAGGTATA
CGAGAAAATACAGTTGCAGTCATTCATGCCTGTGCAAACGACTCATTTGC
GTCCGTGCAACAAGCTCTGCACACAGGTGTCGTAGGTGGCCAGATTCGTT
TCGTCAACACGCTCGTCGATGCCCTTACCCGTGCCGTGTCCCTCAAGGTG
AAAGAACTAGATCCCGAGCTGCTGGTAGAGTGCTGCTCGCTCGTAAAGGT
GAGAGCTTCGGAAGGCTCAAGGCTCAGAGACTCCGTCCATTTTTTAAACA
GGCCGTGTAGTTTTCTCTCGGGGAGCAAAAATTTCTGTGAATCACCGATA
TCGCCCGCTTGGGGTGTGCTTTGTGCCGCTTGTGTGCTACGATGCATGCT
GGTGTGTATGAATGTAGCCCCTTGAAGCGTTCCATTTATTCCAAAATATG
GTGATGCTGGCTCTAAATTTACTATAATACGCAGTAGTGCCACGAAGCAG
CATAGCTGTTTGGCGAAGCATTTCCCCCACGACACTGTCGCTGCAAACGC
CCGGCTTCAGCTTCCCTTCCCGGTCGCCCTATGTGCCTTTCTCGGCCGAC
GTTTGTACGATATGTCTTCCGCTTCAAGGCGAATTCGATCGAAGGCTGCA
AGAAAAAGGAAGTCCGCGTCGTGTACACCCGATGGCAGAACCTCAAGAAG
CTGGCGAGCTACGAAGTGGGCCAGGTGAAGTAGGGACACAAAACCGTGGC
AGAAACAACATCCAGCGGCATCGATGACGCTGGTGATAGTGGCAACGCCT
TGGAGAAATACGCCTCTCCCACGAGAGGATAAATCGAGGCGATTGGTGTG
TGTGAGAGAACCTTTTTAGAACGCGTGACGCGTGCGCCACGTGGCAGGGC
GTGAATGAAGCAGCACCCAAGTGTAAGCTGGCGACGTAGTCGTGCCCCCG
CTGGGTTGCGACAGGCTGTCGCCTCTACGGGTTGAGTTGAAAGATGCCGC
GGAACGATCGCTGCAGGAAGATGCTCAGGTTTATGTGTCTTTCGAGCGCA
ACTTGAGGGGGAGGGGTGGGGGTGCGTTTTGACCACGCCGCCCACCCCGC
TGTTTTTCGCGGCGTCGCGTTTCGTCGCGACTGCGCTTGGTCATTTCCAG
GTGGGCTTCAAGGACGAAAGCAGAGTTTTCAGGTGTCGCGTGGAGAAGAG
TAACGTCATCGTGAACGCTTTGAACCGCACCAAGCGCGAGGAGCACCCAG
ACCTCCCTGCGCTGCAGGAAGAACGCGCCAAGGAACACAGGAGGTGGTTA
CAGCACCGGTGCACTTGCCAACCTGACAAGTGAAGCGCAAGATAATAGCG
TTTTAACGCACGCTGTGTTATCATAAAATCAAGCTTGGCCGCTGGAAGGC
ACCGTAAAGTCAAGCTCGTCACGCGATGGTTGTTCATTTGCGACAAACAT
ATTATGATGCCGGCTGTTGAGTGATTTCCTTGCAAAGGGGCTTTTCAAAA
AGACTTTCTTCGGTTTAAGGCGTGGAACCCGTCTCTTCCGGCCGTTGCAC
CCGTCTCTTCAGGGCACAGAAGACCGCGAGAAAGAAGCTAGAGGAGGAAG
AAAAGATTGCTCGGAGAAAGCAGGTATGCCATCTGAGCGCCGTGTCGCGA
TCGAATTATCTCGATCACCGCGCGCTGTCTCTTAATCGCCTCTGGCCTAA
AAGTTTATTAAGTTATTGGGGATCGTTCAGGTTGAGGCGTCGCCTCCGAT
ACTTTCAACATGCTATAACTATTAATATAACCACTTTATACTAATAATAG
TATAGTGAGTGTTGGAAAAGAGAGAAAGGCGCATATTAATTGGCCCATGG
TGACCTGCAACGGCAACATCCGTTTGGAACTATTTTGGGGTTTACTGGCC
CTGTGCCGGCGGACACTCGGCAGTGAACGCCATCGGTACGCAATTGCGTG
ACTCGATAAACTCGAGACTAACCCGATGGCGTATGGCGGTATACATAAAT
GGACGCCGCCGCGGAACTCGGGAGGAATCCCGTGAGTAAGCACCAGATCC
AGCCTGAGTGTGGAGAATGAGCAGGCTGACGCGGGACGGGACGGCTGAAA
CCGTCTCGCGAGACCAAATTATTAGGCGCGAACGTGGACAGGGAAATGCT
CTTTTTCCCTGTTCAGCTGACCACGAGCAAGATTGGTAACCTTACCCGTT
GGATCCATACTCTGTTTTATGTGATGGCCATGCATGGTTTTGTTTCCAGA
TTCCGTGTATTCAAGATACGTATTACAAAAATCATGGGGATGATATATTC
TGGCGAGTAAGAGGGAAAAGGCGACAGCATACTAACGCTTCAAGCATAAT
AACTATTAAATAACTATTAAATAACTATGAAATGCAGACGTACCGAAGAC
TGAAAGTAGATACCTGGTATTCATACCAAGAACAGTATACCGAAAGTACC
GAACAGTGTACCGAAAGTACCGAACAGTGTACCGAAAGTACCGAACAGTA
TACCGAAAGTACCGAACAGTTTACCGAAAGTACCGAAAGACGCGACGGCT
GTCTGCTCCCCCGACTCGATATCATCTTCCGAAAAAGTTCATCTAGCTCT
CAATTCCTTTCATAGCCAACGAACGCCAATATAAGCCTGTTCGAGTTAGT
GCTCGGGGGGACTGCTGAACCCGTCGCGCGAGACCAAATTCTCAGGCGCG
AACGGGGATAGGGTAATATTCATTTTCCCTGCTCAGCTGACCGCAGGATT
AGCAACCTTACCCGGTTGATCCTTACTCCTGCTATATGTGATTCGACTGG
CGTACGAATTATTTGTACATGGTCGGCAACCCACACCACGAGCGCCAGCC
TTGAGATTCCAGCCGGATGCTACCGCCTTACTATGTGCCTTAATACTACC
GAGATATCGTCACCTGCGGGAGATTCGCCCGCTCCACATCAGTAACGGCG
CAATGTATTACAGTTACAGTTACAGTTACGAGGAGAATGAAGGTCTTCCC
GGCCCTACCCTACCCTACCCTACCGTGCCTATTTGAAATGTCTCGGTTCT
TCTCGGGGATTGGGGGGCGATGGGCTTCACTTCAGGAGGAAGACAAGAGG
CTACGATCATACGACTCTCTGTTCGACGAGTCTAAGATGGCGTCAAGCGC
TGATGTTGCTGCGACGGAGGACGCCAGCGCTTCCATCGCTTTCGAAGACG
ACTTCATGGTGAGAAGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig698:12870..19436+

>mRNA_F-serratus_M_contig698.18082.1 ID=mRNA_F-serratus_M_contig698.18082.1|Name=mRNA_F-serratus_M_contig698.18082.1|organism=Fucus serratus male|type=CDS|length=1434bp|location=Sequence derived from alignment at F-serratus_M_contig698:12870..19436+ (Fucus serratus male)
CTTGGCTTGGGCAGCTTCGCTTTCATCCCACGCCGGCTACGTCAAGCTGT
AGCGCATCCGAGGACGATGGTTTTCTACTTCACGACCAGCGCTTGGCTTG
GGCAGCTTCGCTTTCATCCCACGCCGGCTACGTCAAGCTGTAGCGCATCC
GAGGACGATGGTTTTCTACTTCACGACCAGCGACGGGCACATGGTGTTCA
TGGGCAAAGACAAGTTCGAGAATGAAGACCTTATCCGTTATGGCTTCCCC
GAAGACGTGTGGTTTCACGTGGACAACTTGAGCTCGGCGCACGTCTACCT
CCGCATGAACCGCGGCGAAAAGACGGGCACATGGTGTTCATGGGCAAAGA
CAAGTTCGAGAATGAAGACCTTATCCGTTATGGCTTCCCCGAAGACGTGT
GGTTTCACGTGGACAACTTGAGCTCGGCGCACGTCTACCTCCGCATGAAC
CGCGGCGAAAAGGTGAAAGAACTAGATCCCGAGCTGCTGGTAGAGTGCTG
CTCGCTCGTAAAGGTGAAAGAACTAGATCCCGAGCTGCTGGTAGAGTGCT
GCTCGCTCGTAAAGGCGAATTCGATCGAAGGCTGCAAGAAAAAGGAAGTC
CGCGTCGTGTACACCCGATGGCAGAACCTCAAGAAGCTGGCGAGCTACGA
AGTGGGCCAGGCGAATTCGATCGAAGGCTGCAAGAAAAAGGAAGTCCGCG
TCGTGTACACCCGATGGCAGAACCTCAAGAAGCTGGCGAGCTACGAAGTG
GGCCAGGTGGGCTTCAAGGACGAAAGCAGAGTTTTCAGGTGTCGCGTGGA
GAAGAGTAACGTCATCGTGAACGCTTTGAACCGCACCAAGCGCGAGGAGC
ACCCAGACCTCCCTGCGCTGCAGGAAGAACGCGCCAAGGAACACAGGAGG
TGGTGGGCTTCAAGGACGAAAGCAGAGTTTTCAGGTGTCGCGTGGAGAAG
AGTAACGTCATCGTGAACGCTTTGAACCGCACCAAGCGCGAGGAGCACCC
AGACCTCCCTGCGCTGCAGGAAGAACGCGCCAAGGAACACAGGAGGTGGG
CACAGAAGACCGCGAGAAAGAAGCTAGAGGAGGAAGAAAAGATTGCTCGG
AGAAAGCAGGGCACAGAAGACCGCGAGAAAGAAGCTAGAGGAGGAAGAAA
AGATTGCTCGGAGAAAGCAGGAGGAAGACAAGAGGCTACGATCATACGAC
TCTCTGTTCGACGAGTCTAAGATGGCGTCAAGCGCTGATGTTGCTGCGAC
GGAGGACGCCAGCGCTTCCATCGCTTTCGAAGACGACTTCATGGTGAGAA
GAGAGGAAGACAAGAGGCTACGATCATACGACTCTCTGTTCGACGAGTCT
AAGATGGCGTCAAGCGCTGATGTTGCTGCGACGGAGGACGCCAGCGCTTC
CATCGCTTTCGAAGACGACTTCATGGTGAGAAGA
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