mRNA_F-serratus_M_contig694.18047.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig694.18047.1 vs. uniprot
Match: D7G5J3_ECTSI (PPIase cyclophilin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5J3_ECTSI) HSP 1 Score: 200 bits (508), Expect = 1.670e-56 Identity = 106/144 (73.61%), Postives = 121/144 (84.03%), Query Frame = 1
Query: 1 GISIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVVKRDSAALEIEGESRG--DGG--FRAEAMRGVREDLRQEKVAVSRTVAAALASS 420
G+SI+G KF DEDMS+LKHVGPGVLSMANSGP++NGSQFFITTAPCGWLDG+HVVFGQVLQGMDVV+R+E LGSRSG++SG A IAG G+VKR+SAA+E EG G D G FRA AMRGVR D+R+EK AVSR V A SS
Sbjct: 261 GVSIFGAKFDDEDMSQLKHVGPGVLSMANSGPNSNGSQFFITTAPCGWLDGKHVVFGQVLQGMDVVFRIEDLGSRSGKLSGKAVIAGCGLVKRNSAAMETEGAGWGGADSGNSFRANAMRGVRADVREEKAAVSRAVGNAFKSS 404
BLAST of mRNA_F-serratus_M_contig694.18047.1 vs. uniprot
Match: A0A087SNB6_AUXPR (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SNB6_AUXPR) HSP 1 Score: 125 bits (313), Expect = 2.710e-30 Identity = 64/94 (68.09%), Postives = 75/94 (79.79%), Query Frame = 1
Query: 1 GISIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVVKRD 282
G SIYG KF DE+ +LKH GPGVLSMANSG D+NGSQFFITT WLDGRHVVFG+V++GMDVVY++E+LGS+SG+ S TIA SG V D
Sbjct: 108 GESIYGPKFADENF-KLKHTGPGVLSMANSGRDSNGSQFFITTVKTSWLDGRHVVFGRVIEGMDVVYKIEALGSQSGQPSKKVTIAKSGEVTGD 200
BLAST of mRNA_F-serratus_M_contig694.18047.1 vs. uniprot
Match: A0A2V0P3P9_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P3P9_9CHLO) HSP 1 Score: 124 bits (312), Expect = 3.310e-30 Identity = 64/95 (67.37%), Postives = 74/95 (77.89%), Query Frame = 1
Query: 1 GISIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVVKRDS 285
G SIYG KF DE+ +LKH GPG LSMAN+GPDTNGSQFFITT GWLDGRHVVFG+VL+GMDVV ++E+LGS SG+ S IA SG +K S
Sbjct: 112 GESIYGEKFADENF-KLKHKGPGYLSMANAGPDTNGSQFFITTIKTGWLDGRHVVFGKVLEGMDVVMKVEALGSGSGKPSKKVVIADSGEIKETS 205
BLAST of mRNA_F-serratus_M_contig694.18047.1 vs. uniprot
Match: A0A061SBR5_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SBR5_9CHLO) HSP 1 Score: 124 bits (311), Expect = 7.430e-30 Identity = 62/91 (68.13%), Postives = 73/91 (80.22%), Query Frame = 1
Query: 1 GISIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVV 273
G SIYG KFKDE+ +LKH GPG LSMAN+GPDTNGSQFFITT WLDGRHVVFG+V++GMDVVY++ES+GS SG+ S IA SG +
Sbjct: 130 GESIYGMKFKDENF-KLKHEGPGYLSMANAGPDTNGSQFFITTVKTSWLDGRHVVFGKVIEGMDVVYKVESVGSSSGKTSKTVKIADSGEL 219
BLAST of mRNA_F-serratus_M_contig694.18047.1 vs. uniprot
Match: A0A5B7FSR6_PORTR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=A0A5B7FSR6_PORTR) HSP 1 Score: 121 bits (304), Expect = 1.410e-29 Identity = 60/93 (64.52%), Postives = 73/93 (78.49%), Query Frame = 1
Query: 1 GISIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVVKR 279
G SIYG KF+DE+ L H GPG+LSMAN+GP+TNGSQFF+TT PC WLDG+HVVFG+V++GMDVV +ESLGSRSGR S I+ VK+
Sbjct: 70 GKSIYGTKFRDENFE-LTHTGPGLLSMANAGPNTNGSQFFLTTVPCPWLDGKHVVFGKVVEGMDVVKAIESLGSRSGRPSKKVVISDCDEVKK 161
BLAST of mRNA_F-serratus_M_contig694.18047.1 vs. uniprot
Match: A8J282_CHLRE (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Chlamydomonas TaxID=3052 RepID=A8J282_CHLRE) HSP 1 Score: 123 bits (308), Expect = 1.960e-29 Identity = 60/91 (65.93%), Postives = 74/91 (81.32%), Query Frame = 1
Query: 1 GISIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVV 273
G SIYG +F DE+ + LKH GPGVLSMAN+GPDTNGSQFFITT WLDGRHVVFG+V++GMDVVY++E++G+ SG+ S TIA SG +
Sbjct: 131 GESIYGSRFPDENFA-LKHTGPGVLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVVEGMDVVYKVEAVGTSSGKPSKKVTIADSGEL 220
BLAST of mRNA_F-serratus_M_contig694.18047.1 vs. uniprot
Match: A0A8J4D056_9CHLO (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4D056_9CHLO) HSP 1 Score: 122 bits (307), Expect = 2.050e-29 Identity = 61/91 (67.03%), Postives = 72/91 (79.12%), Query Frame = 1
Query: 1 GISIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVV 273
G SIYG +F DE+ + LKH GPGVLSMAN+GPDTNGSQFFITT WLDGRHVVFG+VL+GMDVVY++E +GS SG+ S IA SG +
Sbjct: 120 GESIYGSRFPDENFA-LKHTGPGVLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLEGMDVVYKVEGVGSGSGKPSKKVVIADSGEL 209
BLAST of mRNA_F-serratus_M_contig694.18047.1 vs. uniprot
Match: A0A5A4MJQ2_9ROSI (Peptidyl-prolyl cis-trans isomerase (Fragment) n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A5A4MJQ2_9ROSI) HSP 1 Score: 119 bits (298), Expect = 2.090e-29 Identity = 59/91 (64.84%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 1 GISIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVV 273
G SIYG KF DE+ +LKH GPG+LSMAN+GPDTNGSQFFITT WLDGRHVVFG+VL GMDVVY++E+ G++SG IA SG +
Sbjct: 15 GESIYGEKFADENF-KLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKIEAEGNQSGTPKSKVVIADSGEI 104
BLAST of mRNA_F-serratus_M_contig694.18047.1 vs. uniprot
Match: UPI0004BE8A9A (peptidylprolyl isomerase n=1 Tax=Streptomyces sp. NRRL S-87 TaxID=1463920 RepID=UPI0004BE8A9A) HSP 1 Score: 121 bits (303), Expect = 2.200e-29 Identity = 62/91 (68.13%), Postives = 73/91 (80.22%), Query Frame = 1
Query: 1 GISIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVV 273
G SIYG KF DE+ +LKH PG+LSMAN+GP+TNGSQFFITT WLDG+HVVFG+V++GMDVV ++E LGSRSG VS TIA SGVV
Sbjct: 74 GKSIYGEKFADENF-KLKHTRPGLLSMANAGPNTNGSQFFITTIVTDWLDGKHVVFGEVVEGMDVVKQIEDLGSRSGAVSAKVTIAKSGVV 163
BLAST of mRNA_F-serratus_M_contig694.18047.1 vs. uniprot
Match: A0A1H6YZM6_9PSED (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudomonas sp. NFR16 TaxID=1566248 RepID=A0A1H6YZM6_9PSED) HSP 1 Score: 121 bits (303), Expect = 2.330e-29 Identity = 61/94 (64.89%), Postives = 74/94 (78.72%), Query Frame = 1
Query: 1 GISIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVVKRD 282
G SIYG KF DE+ + LKH PG+LSMAN+GP+TNGSQFFITT WLDG+HVVFG+V++GMDVV +E+LGS+SGR S IA SG VK+D
Sbjct: 75 GKSIYGNKFADENFT-LKHTKPGLLSMANAGPNTNGSQFFITTVVTSWLDGKHVVFGEVVEGMDVVKAIEALGSQSGRTSKKVVIADSGEVKQD 167 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig694.18047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig694.18047.1 >prot_F-serratus_M_contig694.18047.1 ID=prot_F-serratus_M_contig694.18047.1|Name=mRNA_F-serratus_M_contig694.18047.1|organism=Fucus serratus male|type=polypeptide|length=151bp MSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMback to top mRNA from alignment at F-serratus_M_contig694:252382..256581- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig694.18047.1 ID=mRNA_F-serratus_M_contig694.18047.1|Name=mRNA_F-serratus_M_contig694.18047.1|organism=Fucus serratus male|type=mRNA|length=4200bp|location=Sequence derived from alignment at F-serratus_M_contig694:252382..256581- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig694:252382..256581- >mRNA_F-serratus_M_contig694.18047.1 ID=mRNA_F-serratus_M_contig694.18047.1|Name=mRNA_F-serratus_M_contig694.18047.1|organism=Fucus serratus male|type=CDS|length=906bp|location=Sequence derived from alignment at F-serratus_M_contig694:252382..256581- (Fucus serratus male)back to top |