mRNA_F-serratus_M_contig6923.18028.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6923.18028.1 vs. uniprot
Match: A0A6H5JB60_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB60_9PHAE) HSP 1 Score: 646 bits (1667), Expect = 6.200e-218 Identity = 384/695 (55.25%), Postives = 457/695 (65.76%), Query Frame = 1
Query: 319 KSKKRKR---APSSNTAEKDGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLEEEKRLRKQCEAERVRLAIENESLKDRIARLTLNTISAKKQNDLTGRPTRQAPGAPACCSTPRRTVR--TTASTPPPELSSTRDTILSTPGLRDAS----CLSSSTSGARRSSSLISLPAS-------SMAMNGSSSERG--TSEYGESGFGEESGMGGLRFQHTLSKGLRSGRVAEFAGGSAGALLVSQEFGSVGGARGAMRHGVTKCSLADFRHQKNIFLHREQVRDVKFSGQAGGASYVLTTSFDRTLKVCDLRTDSVVIQYSVEGNGWSCQWSATDSNQMFCGIVDGSRTSAVVLYDLRSTAGAVRKLRAAANQQQPVHSVCHTADDELLCATMGGVWAWGGGTKGGEPATSESGDREEPVAEQLQIQAGPCCSLSQSRGSGGRS--DVSTRRFLVSTRGSSASHAIFGLEASHTPSDGAAVAE--RAEIGGDTGATLGTTHGAWRGGAGHSLVPETIGSR-------RRRPVS--------------VNSAWAERWEKLPCVAQGHQSRHALSRSLLWAPITDGGGLFIAGGDEGTNQPWIWDALAGQVCRRLTAHASPVLDVALLEENAWGVGLLAAVSQGEMKVYQT 2274
K KKRKR S E DGERCSICLDPWTSKGKHRICTL CGHLFG++CIERWL+ERRSCPQCGAKVG+KG++R+IPLFL NL A+DTGELETA LEEEKRLRKQCEAERVR++IEN SLKDR++RL + + + PG P P RT+ T P +SS S+ + +S C S G + S P + G S RG +E G G S + +RF+ LS+ + SGRVA FAGG+AGAL+VSQE G GG+RG++RHGVTK SLAD RH K+I LHREQ+RDVKFS G Y+L+TSFD+TLKVCDLRTDSVV+QY +EG+GWSCQWS+T QMFCG+VDG+RTSAV L+DLRSTAGAVRKLRAAA+Q+QP+HS+CHTADD L CATMGGVWAWGGGTK E SE+ D EE AE+LQIQAG CCSLSQS G+ S DV + FLVSTRGSSASHA+F L ++ S AA A R ++ R G+ + E R R+P S +WA+RW + P VAQGHQS+H LSRSLLW P + G GL IAGGDE T QPW+WDAL G VC RL +H SPVLD A L++ + G GLL+AVSQ E+KVYQT
Sbjct: 97 KLKKRKRNSTGSSRGAPEADGERCSICLDPWTSKGKHRICTLLCGHLFGQSCIERWLKERRSCPQCGAKVGAKGTNRIIPLFLQNLVAQDTGELETARTLLEEEKRLRKQCEAERVRVSIENASLKDRLSRLNQGGAGVVSSSVARSQESVSTPGCPK----PIRTLSQFATPGRAGPGVSSVA--YSSSVDIGSSSFMTPCPKISHPGPAAAYSRFKTPPPRRPIGNLDVGAGGGSGGRGLAATESGSEGAAAGSTVA-VRFEQLLSRDVLSGRVAAFAGGAAGALVVSQELGIAGGSRGSLRHGVTKFSLADLRHNKSIHLHREQLRDVKFSADGGSVGYILSTSFDKTLKVCDLRTDSVVVQYELEGSGWSCQWSSTTPTQMFCGVVDGTRTSAVQLFDLRSTAGAVRKLRAAASQRQPIHSICHTADDVLCCATMGGVWAWGGGTK--EGGGSEAWDPEELAAEKLQIQAGACCSLSQSHGTAASSSSDVDQQPFLVSTRGSSASHAVFRLASASASSRQAATAAGVRENPTAESHKDQEVAVEGRRDAGGYVAMEEDQSERFECEHATERQPSSFGFGSSLARLSAMVARRSWADRWTRSPRVAQGHQSQHTLSRSLLWDP-SPGDGLLIAGGDERTKQPWMWDALTGDVCNRLASHRSPVLDFACLQDYSSGKGLLSAVSQSEIKVYQT 781
BLAST of mRNA_F-serratus_M_contig6923.18028.1 vs. uniprot
Match: D8LKW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW0_ECTSI) HSP 1 Score: 575 bits (1482), Expect = 5.530e-192 Identity = 343/630 (54.44%), Postives = 409/630 (64.92%), Query Frame = 1
Query: 367 DGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLEEEKRLRKQCEAERVRLAIENESLKDRIARL------TLNTISAKKQNDLTGRPTRQAPGAPACCSTPRRTVRTTASTPP---PELSSTRDTILSTPGLRD--ASCLSSSTSGARRSSSLISLPASSMAMNGSSSERGTSEYGESGFGEESGMGG--------LRFQHTLSKGLRSGRVAEFAGGSAGALLVSQEFGSVGGARGAMRHGVTKCSLADFRHQKNIFLHREQVRDVKFSGQAGGASYVLTTSFDRTLKVCDLRTDSVVIQYSVEGNGWSCQWSATDSNQMFCGIVDGSRTSAVVLYDLRSTAGAVRKLRAAANQQQPVHSVCHTADDELLCATMGGVWAWGGGTKGGEPATSESGDREEPVAEQLQIQAGPCCSLSQSRGSGGRS--DVSTRRFLVSTRGSSASHAIFGLEASHTPSDGAAVAE--------------------RAEIGGDTGATLGTTHGAWRGGAGHSLVPETIGS----RRRRPVSVNSAWAERWEKLPCVAQGHQSRHALSRSLLWAPITDGGGLFIAGGDEGTNQ 2121
DGERCSICLDPWTSKGKHRICTL CGHLFG++CIERWL+ERRSCPQCG KVG+KG++R+IPLFL NL A+DTGELETA LEEEKRLRKQCEAERVR++IEN SLKDR++RL +++I A+ Q ++ PG P P+RT+ A TP P +SS + G C S SG + P + G G ESG G +RF+ LS+ + SGRVA FAGG+AGAL+VSQE G GG+RG++RHGVTK SLAD RH K+I LHREQVRDVKFS G Y+L+TSFD+TLKVCDLRTDSVV+QY +EG+GWSCQWS+T QMFCG+VDG+RTSAV L+DLRSTAGAVRKLRAAA+Q+QP+HS+CHTADD L CATMGGVWAWGGGTK E SE+ DREE AE+LQIQAG CCSLSQS G+ S DV + FLVSTRGSSASH +F L + S AA A + + GG+ + + P ++G R V +WA+RW + P VAQGHQS+H LSRSLLW P + G GL IAGGDE T Q
Sbjct: 41 DGERCSICLDPWTSKGKHRICTLLCGHLFGQSCIERWLKERRSCPQCGTKVGAKGTNRIIPLFLHNLVAQDTGELETARTLLEEEKRLRKQCEAERVRVSIENASLKDRLSRLDQGGAGVVSSIVARSQGSVS------TPGCPK----PKRTLSQLA-TPGGAGPGVSSVAYSSSVDIGSNSFMTPCPKISHSGPAVAYPQFKTPPPRRPIGNLDVGAGGGSGGWGLAATESGSEGAAVGSTVAVRFEQLLSRDVLSGRVAAFAGGAAGALVVSQELGIAGGSRGSLRHGVTKFSLADLRHNKSIHLHREQVRDVKFSADGGSVGYILSTSFDKTLKVCDLRTDSVVVQYELEGSGWSCQWSSTAPTQMFCGVVDGTRTSAVQLFDLRSTAGAVRKLRAAASQRQPIHSICHTADDVLCCATMGGVWAWGGGTK--EGGVSEAWDREEQAAEKLQIQAGACCSLSQSHGTAAASSSDVDQQPFLVSTRGSSASHTVFRLAPASACSRQAAAAAGVGENPTAESHKDQEVAVEGQRDAGGNVAMEEDQSEEKFECEHAVERQPSSLGFDTSLARLSAVVARRSWADRWTRSPRVAQGHQSQHTLSRSLLWDP-SPGDGLLIAGGDERTKQ 656
BLAST of mRNA_F-serratus_M_contig6923.18028.1 vs. uniprot
Match: A0A5D6XLJ5_9STRA (RING-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLJ5_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.520e-30 Identity = 132/453 (29.14%), Postives = 186/453 (41.06%), Query Frame = 1
Query: 379 CSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLEEEKRLRKQCEAERVRLAIENESLKDRIARLTLNTISAKKQNDLTGRPTRQAPGAPACCSTPRRTVRTTASTPPPELSSTRDTILSTPGLRDASCLSSSTSGARRSSSLISLPASSMAMNGSSSERGTSEY---GESGFGEESGMGGLRFQHTLSKGLRSGRVAEFAGGSAGALLVSQEFGSVGGARGAMRHGVTKCSLADFRHQKNIFLHREQVRDVKFSGQAGGASYVLTTSFDRTLKVCDLRTDSVVIQYSV---EGNGWSCQWSATDSNQMFCGIVDGSRTSAVVLYDLRSTAGAVRKLRA-AANQQQPVHSV----CHTADDELLCATMGGVWAWGGGTKGGEPATSESGDREEPVAEQLQIQAGPCCSL 1704
CSIC DP G+HR+ +L CGHLFGK CIERW+ ER++CP C V V PLF ++ D +E + E EK R Q E E R ++ E L R + +K+ A CS + A+ +S+ SLP + S G E+ + ++S + S+ L++ RV A S L V E A + GV K S AD RH +I H+ VRD++ S + A LT +FD L V +L + SVV+Q ++ + GWSC +S+ D ++CG DGS V YD+R G + A AA+++QPVHS+ + L+ AT GV W S SGD + CCSL
Sbjct: 98 CSICYDPCMISGRHRLVSLRCGHLFGKKCIERWVTERKTCPNCNVAVRKAD---VRPLFSDHVAVVDNSGVEAMRQKYEHEKSKRIQAETELSRAKLQMEVLVADSKRHQDEALHWRKEF------------ADLRCSVASERFTSAAA-----------------------------------ASMGSLPHPTAPEPRSKFAAGGGEFLLSQQPVVPDDSDAPAWNYTEVFSRPLKNSRVFAIAA-SCTMLCVGDELS-------ATQFGVLKVSTADPRHAAHIAAHQSPVRDLRISTREDLA---LTVAFDGKLVVSNLHSQSVVLQCALPPGKRQGWSCAFSSADPFTLYCGFHDGS----VAKYDMRKPGGNDAVVAAFAAHERQPVHSLRLFSAPDGSERLVAATFSGVSVWND--------CSSSGDSSNGRVADAHVSVPSCCSL 477
BLAST of mRNA_F-serratus_M_contig6923.18028.1 vs. uniprot
Match: A0A8K1FG87_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG87_PYTOL) HSP 1 Score: 133 bits (334), Expect = 2.050e-28 Identity = 137/487 (28.13%), Postives = 205/487 (42.09%), Query Frame = 1
Query: 379 CSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLEEEKRLRKQCEAERVRLAIENESLKDRIARLTLNTIS-AKKQNDL-----TGRPTRQAPGAPACCSTPRRTVRTTASTPPPELSSTRDTILSTPGLRDASCLSSSTSGARRSSSLISLPASSMAMNGSSSERGTSEYGESGFGEESGMGGLRFQHTLSKGLRSGRVAEFAGGSAGALLVSQEFGSVGGARGAMRHGVTKCSLADFRHQKNIFLHREQVRDVKFSGQAGGASYVLTTSFDRTLKVCDLRTDSVVIQYSV---EGNGWSCQWSATDSNQMFCGIVDGSRTSAVVLYDLR-STAGAVRKLRAAANQQQPVHSVC----HTADDELLCATMGGVWAWGGGTKGGEPATSESGDREEPVAEQLQIQAGPCCSLSQSRGSGGRSDVSTRRFLVSTRGSSASHAIF 1797
C++C DP T G+HR+ +L CGH+FGK CI+RW++ER++CP C V + PLF ++ D + + E EK R Q E E R ++ + + R +K DL + R +R AP V +T S+ PP + T T G S + S +S P N SSS G ++ L++ RV + + S L V + F +G+ K S AD RH I H+ VRD++ S + L+ +FD L V +LR+DSV +QY++ + GWSC +S +D M+CG DG+ V YD+R S AG V +QPVHS+ ++L+ AT G W A + +G P+ L C SLS + R ++R +T A H+I+
Sbjct: 137 CTVCYDPCTLTGRHRLVSLKCGHVFGKKCIDRWVQERKTCPNCNVAVRKAD---IRPLFTDHVAVVDNSGVADLNDKFEAEKSRRIQMETELSRAKLQLQLAQSEAERFKEEAKQWRQKVADLQCRMASERFSRSAP------------VVSTQSSQPPATQPSYHTPTKTDG--------SESQAFSPLSPTLSQP---RTPNESSS-------------------GWNYRMLFQYPLQNARVFDIST-SCSLLCVGEAFSP-------QSYGIVKLSTADSRHAVRIPAHQSPVRDLRLSVNE---EFALSVAFDGKLVVTNLRSDSVALQYALPQTKRQGWSCSFSKSDPFAMYCGFFDGT----VCKYDMRRSLAGGVPLATFTLPMRQPVHSIALCPAFGEREQLVAATFSGFGLWS------PDAMALAGVDASPIQTSLFTPVPNCSSLSSMQAKPSRILATSRTQATATP---AKHSIY 554
BLAST of mRNA_F-serratus_M_contig6923.18028.1 vs. uniprot
Match: L8GV33_ACACA (Zinc finger, C3HC4 type (RING finger) domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GV33_ACACA) HSP 1 Score: 130 bits (326), Expect = 1.650e-27 Identity = 197/724 (27.21%), Postives = 300/724 (41.44%), Query Frame = 1
Query: 325 KKRKRAPSSNTAEKDGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLEEE----KRLRKQCEAERVRLAIENESLKDRIARLTLNTISAKKQNDLTGRPTRQAPGAPACCSTPRRT--------------VRTTASTPPPELSSTRDTILS----TPGLRDASCLSSSTSGARRS-----------------SSLISLPASSMAMNGSSSE--------------------RGTSEYGESGFGEESGMGGLRFQHTLSKGLRSGRVAEFAGGSAGALLVSQEFGSVGGARGAMRHGVTKCSLADFRHQKNIF-LHREQVRDVKFSGQAGGAS--YVLTTSFDRTLKVCDLRTDSVVIQYSVEGNGWSCQWSATDSNQMFCGIVDGSRTSAVVLYDLRSTAGAVRKLRAAANQQQPVHSVCHTADDE----LLCATMGGVWAWGGGTKGGEPATSESGDREEPVAEQLQIQAGPCCSLSQSRGSGGRSDVSTRRFLVSTRGS----SASHAIFGLEASHTPSDGAAVAERAEIGGDTGATLGTTHGAWRGGAGHSLVPETIGSRRRRPVSVNSAWAERWEKLPCVAQGHQSRHALSRSLLWAPITDGGGLFIAGGDEGTNQPWIWDALAGQ-VCRRLTAHASPVLDVALLEENAWGVGL-LAAVSQGEMKVYQTSS 2280
K K+A + + +C+ICLD W S G H+IC+L CGHLFG++CIE+WL + CP C AK + SH + PLF+ +L D E L EE ++L + +A+ R+ +E + K ++ +L + + + + QAP +PA T +RT A L S I + TP R + LS+ + S SL +P+ + S+SE R S + + H LS +R RV + + G LL S GG+ + + G+ K SL D HQ+ I LH +Q+RD+K G G AS VLT S D+TL V LRT+S V +++E W+C+W D N ++CG+ +AV +YD+R++ A+ + +A Q P+HS+ D + LL A+ GGV+ + +E + P++ G C S+S D +R S R S SH IF E P + L T + S +T+ SR L G ALSR LL +A G E +N +WD +GQ + +L H+SPV+DV E G GL LA++S+ ++ ++ S+
Sbjct: 19 KSHKKAKVEHQLPESASQCTICLDSWQSSGPHKICSLKCGHLFGRSCIEKWLRNNKLCPMCKAKA--QRSH-IRPLFVQHLIVVDNTEECRLTKLLAEEAGKREKLVRSYKADMERIHLECIAYKQQVDKLKRELDDERTKFNWSHWNVTQAP-SPAAYGDADDTERGLDGHDLLGGLSIRTDAGVC--ALFSLAQPIKAACYQTPASRSGAALSADLTFHAPSYPYFHHFHFRLHSCSYCHSLFIVPSLLSLRSTSASEILIDEPPISIRADRPKELDSRAPLPLATSQIKRK-----MDTVHKLS--VRRSRVLDIS--CEGHLLASAV---TGGSGSSSKWGLVKVSLLDPTHQETIAGLHDKQIRDIK-CGVLGSASENLVLTASEDKTLHVVSLRTNSSVQTFTLEAGTWACEWDRNDPNYIYCGV-----RNAVWVYDMRNSTIALPRPTSAVTQ--PIHSLGFLPDHQGRKGLLAASCGGVFCF--------DLLNEWEATKLPLS-------GVCSSVSY--------DHESRHCAASFRSSPHYAKQSHNIFTFEEGAKPKE-----------------LRTLY---------STSTQTLLSR---------------STLFSFVDGDDL--ALSRRLL-----------LAAGSEASNAVALWDVASGQQIAHQLAPHSSPVMDVRHYGE---GGGLFLASLSEQQIFLHNLSA 636
BLAST of mRNA_F-serratus_M_contig6923.18028.1 vs. uniprot
Match: A0A662Y0B0_9STRA (RING-type domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0B0_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.660e-24 Identity = 134/480 (27.92%), Postives = 196/480 (40.83%), Query Frame = 1
Query: 379 CSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLEEEKRLRKQCEAERVRLAIENESLKDRIARLTLNTISAKKQ-NDLTGRPTRQAPGAPACCS-TPRRTVRTTASTP------PPELSSTRDTILSTPGLRDASCLSSSTSGARRSSSLISLPASSMAMNGSSSERGTSEYGESGFGEESGMGGLRFQHTLSKGLRSGRVAEFAGGSAGALLVSQEFGSVGGARGAMRHGVTKCSLADFRHQKNIFLHREQVRDVKFSGQAGGASYVLTTSFDRTLKVCDLRTDSVVIQYSV---EGNGWSCQWSATDSNQMFCGIVDGSRTSAVVLYDLRSTAGAVRKLRAAAN--QQQPVHSV------CHTADDELLCATMGGVWAWGGGTKGGEPATSESGDREEPVAEQLQIQ----AGPCCSLSQSRGSGGRSDVSTR 1749
C+IC +P G+HR+ L CGHLFGK CIERW ++R+CP C V + PLF ++ D +E + E EK R E E R ++ + + RL + KK DL + + + + T T T+ P P LS I S P +S ST R S + ASS +++ S + E+ + L + RV + A S F VG + G +GV S D RH+ + H VRD+ + + A LT +FD L V +L T SVV+Q + GWSC S D M+CG DG+ V YD+R + + + + ++QPVHS+ + L AT+ G+ W T ++ +R +A G CCSLS R S + VS+R
Sbjct: 84 CTICCEPCMISGRHRLVALKCGHLFGKKCIERWTNDKRTCPNCNTAVRRTD---IRPLFSDHVAVVDNSGVEDMTQKYEAEKSKRIHVETELARAKLQVQMKTAEVTRLGGEVLKWKKMVADLRCKTVNDRFASESLATGTRENTQLNTSGRPGLVVVGPDRLSRPAWPIQSQPA---SSVSHDSTELERCRSEPAAAAASSSSLSQPSMATSNDPFAEAI---------QNYTPVFDFPLENARVFDIAR--------SCSFLCVGESLGRDAYGVLMLSSRDPRHRMRVRAHSSPVRDLCINEKEDAA---LTVAFDGKLAVTNLHTQSVVLQLQLPPGRRQGWSCALSEDDPFAMYCGFQDGT----VAKYDIRKPTDGEQGIVTSFSLPERQPVHSIQLFRGQAEPRAEGLAAATLQGLSVWTNVTDLSTDSSLHVVNRSRGLAAATPDSHVTIGGQCCSLSACRSSSSKMVVSSR 533
BLAST of mRNA_F-serratus_M_contig6923.18028.1 vs. uniprot
Match: A0A2D4BQD1_PYTIN (RING-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQD1_PYTIN) HSP 1 Score: 120 bits (301), Expect = 2.680e-24 Identity = 128/438 (29.22%), Postives = 182/438 (41.55%), Query Frame = 1
Query: 379 CSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKD-TGELE-TAMMRLEEEKRLRKQCEAERVRLAIE---NESLKDRIARLTLNTISAKKQNDLTGRPTRQAPGAP----------------ACCSTPRRTVRTTASTPPPELSSTRDTILSTPGLRDASCLSSSTSGARRSSSLISLPASSMAMNGSSSERGTSEYGESGFGEESGMGGLRFQHTLSKGLRSGRVAEFAGGSAGALLVSQEFGSVGGARGAMRHGVTKCSLADFRHQKNIFLHREQVRDVKFSGQAGGASYVLTTSFDRTLKVCDLRTDSVVIQYSV---EGNGWSCQWSATDSNQMFCGIVDGSRTSAVVLYDLRSTA-GAVRKLRAAANQQQPVHSVCHTAD------DELLCATMGGVWAW 1599
CS+C D T G+HR+ +L CGH+FGK CIERW+ ER+SCP C V + PLF ++ D TG ++ T E+ +R+ + E R +L ++ E+ + + Q L R A A A +P R VR T +P +ST LR+AS +S + A S +S P + +G ++ L+S RV + S L V + F HG+ K S AD H I H VRD+ S L+ +FD L V LRTDSVV+QY++ GWSC S D N ++CG+ DG+ V YD+R +A A + +QPVHSV ++L+ AT GV W
Sbjct: 166 CSVCYDACTRSGRHRLVSLKCGHVFGKKCIERWVAERKSCPNCNESVRRSD---IRPLFTDHVAVVDNTGAVDMTDKFEAEKSRRILVETELSRAKLQLQIAQTEATRWQXXXXXXXXXXXDLQCQLASE--RFAASAXXXXXXXXXXXXXXXXXAELQSPTR-VRPTPFSP-----------VSTTPLREASSISQLSFTAASSPPPLSSP--------------SDAWG--------------YRPLFRYSLQSARVFGISK-SCSLLCVGEAFSGTS-------HGILKLSAADQXHASRIAAHLSPVRDLCVSA---AEXLXLSVAFDGRLAVSSLRTDSVVLQYALPTGRSXGWSCCLSDVDPNALYCGLQDGT----VAKYDMRRSALNAAPVALFSLPLRQPVHSVKLAPQPGLGTTEQLVAATFSGVGVW 543
BLAST of mRNA_F-serratus_M_contig6923.18028.1 vs. uniprot
Match: A0A2R6X6G3_MARPO (RING-type domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X6G3_MARPO) HSP 1 Score: 121 bits (303), Expect = 3.230e-24 Identity = 165/631 (26.15%), Postives = 259/631 (41.05%), Query Frame = 1
Query: 367 DGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLEE--RR--SCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLEEEKRLRKQCEAERVRLAIENESLKDRIARL-------TLNTISAKKQNDLTGRPTRQAPGAPACCSTPRRTVRTTASTPPPELSSTRDTILS-TPGLRDASCLSSSTSGARRSSSLISLPASSMAMNGSSSERGTSEYGESGFGEESGMGGLRFQHTLSKGLRSGRVAEFAGGSAGALLVSQEFGSVGGARGAMRHGVTKCSLADFRHQKNIFLHRE--QVRDVKFSGQAGGASYVLTTSFDRTLKVCDLRTDSVVIQYSVEGNGWSCQWSATDSNQMFCGIVDGSRTSAVVLYDLRSTAGAVRKLRAAANQQQPVH---SVCHTADDELLCATMGGVWAWGGGTKGGEPATSESGDREEPVAEQLQIQAGPCCSLSQSRGSGGRSDVSTRRF--LVSTRGSSASHAIFGLEASHTPSDGAAVAERAEIGGDTGATLGTTHGAWRGGAGHSLVPETIGSRRRRPVSVNSAWAERWEKLPCVAQGHQSRHALSRSLLWAPITDGGGL--FIAGGDEGTNQPWIWDALAGQVCRRLTAHASPVLDV 2196
DG C IC++PWT+ G+HRIC+L CGHLFGK+CI+RW+++ RR CP C + + + ++ ++ D E A +E KRL+ + E E R+ E + DR+ R L + + +DL RQ+ RR R ++ S D T G R SSSL S+ G G GE Q + L +V + S L VS + + G G+T+ SL + + L +RDV+FS L +S + L + L ++++VI Y+++ WSC W + NQ++ G+ +GS ++++DLR T+ + + ++ + PVH SV +L A+ G + W G AT+ + + P + C SL+ + ++ V++ R L + SS+++A + P A + T +H + SL T G + R W RWE + GH+S + RS + G L A GDEGTN W+WD V + L H SPVLDV
Sbjct: 617 DGLACPICMEPWTNTGEHRICSLACGHLFGKSCIKRWIKQGGRRLSKCPHCNKRAKVEDLRNI---YVPHIAVTDGQGYEMA----QEVKRLKSENE-ELKRMNAELQMEMDRLLRSEQATTPSVLQKVEVNRSDDLANARRRQSSLQTFYGRNERR----------------RSSVRSYEEHWLDGGHPKGQTGGHRSSSSLASI-------------------GNRGLGEN-----FILQDEIH--LLGAKVFDMDAYSQMGL-VSNKASNHGST-----FGLTRISLITLSEVQYLSLPPGLGAIRDVRFSPSG---KLALVSSLGKRLSLYSLESNNIVINYALQSAPWSCAWDPSVPNQVYAGLQNGS----LLIFDLRQTSSPIASVNGSSTR--PVHTLQSVQSQTRKGILSASSSGAYFWDMG------ATAALAEIQRPQCISEDYREKLCVSLAYAPCL--KTAVASFRPSPLAHSEASSSANASIQADFLSQPCTTARRSLEPVSSTQTSTQDHPSHCVFSSRFEDSLSESTAGGKVGR-----REW--RWEGGKTMV-GHKSTSVMPRSAIIVEPMSGISLRTSFACGDEGTNAVWLWDMNTLSVTQTLVPHQSPVLDV 1166
BLAST of mRNA_F-serratus_M_contig6923.18028.1 vs. uniprot
Match: A0A556THP3_BAGYA (E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556THP3_BAGYA) HSP 1 Score: 117 bits (293), Expect = 2.370e-23 Identity = 148/620 (23.87%), Postives = 234/620 (37.74%), Query Frame = 1
Query: 367 DGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLE-ERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDTGELETAMMRLEEEKRLRKQCEAERVRLAIENESLKDRIARLTLNTISAKKQNDLTGRPTRQAPGAPACCSTPRRTVRTTASTPPPELSSTRDTILSTPGLRDASCLSSSTSGARRSSSLISLPASSMAMNGSSSERGTSEYGESGFGEESGMGGLRFQHTLSKGLRSG-RVAEFAGGSAGALLVSQEFGSVGGARGAMRHGVTKCSLADFRHQKNIFLHREQVRDVKFSGQAGGASYVLTTSFDRTLKVCDLRTDSVVIQYSVEGNGWSCQWSATDSNQMFCGIVDGSRTSAVVLYDLRSTAGAVRKLRAAANQQQPVHSVCHTADDELLCATMGGVWAWGGGTKGGEPATSESGDREEPVAEQLQIQAGPCCSLSQSRGSGGRSDVSTRRFLVSTRGSSASHAI--FGLEASHTPSDGAAVAERAEIGGDTGATLGTTHGAWRGGAGHSLVPETIGSRRRRPVSVNSAWAERWEKLPCVAQGHQSRHALSRSLLWAPITDGGGLFIAGGDEGTNQPWIWDALAGQVCRRLTAHASPVLDVALLEEN 2214
+GE CSIC +PWT+ G+HR+ TL CGHLFG CI+RWL+ + CPQC K ++ L+ + A D E E LE+E+ LR++ E E + ++ + + D +L K+ L + TS SS++ TS S E S G F + G RV + LL SQ G GV K S + + + +H +Q+R + F+ Q G +L+ SFD T+K+ L T++VV Y+ WSC W ++N ++ G+ +GS V +YD R T+ V++L A PV S+ + GG+ A G +GG E D L +++G C + + + +R LV+ R + ++ +E + +P +A A PV +A G S+ ++ +P TD + GDEG+N +WDA +G + ++L A PV+D+ E N
Sbjct: 189 EGETCSICFEPWTTSGEHRLATLRCGHLFGFTCIDRWLKGQGAKCPQCNKKAKRAD---IVLLYAHKIRAVDNTEQERLKRSLEQEQSLRRKAELESAQCRLQLQVVTDECGKLRREVQELKR-------------------------------------------------------LMAHTSS-------------------SSTQSQTSALSLSQRQEPSSRGNYIFSKAVLVSQAGGCRVISYCE-PLSCLLASQPSPHASLVPG---FGVKKISTVNLKASHYVPIHVKQIRGLAFNRQHDGL--LLSASFDNTIKLTSLFTNTVVQAYNTGKPVWSCCWCHDNNNYIYAGLSNGS----VRVYDTRDTSTHVQEL-APLRSSSPVVSLSYLPRAASNLFPCGGLIA--GSLEGG--CFWEQVDGSTYRQHVLPLESGGCTDI--------QVEPESRHCLVTYRPGRTNPSLRCVLMELNRSPHQDSAQAPVCSC---------------------------------SPVQTFTA-------------GSSSKLLTKNAVFKSPATDA--TLVCAGDEGSNSTMVWDASSGALLQKLPADI-PVMDICPFETN 659
BLAST of mRNA_F-serratus_M_contig6923.18028.1 vs. uniprot
Match: A0A2K1IM72_PHYPA (RING-type domain-containing protein n=7 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IM72_PHYPA) HSP 1 Score: 115 bits (287), Expect = 2.310e-22 Identity = 172/690 (24.93%), Postives = 279/690 (40.43%), Query Frame = 1
Query: 367 DGERCSICLDPWTSKGKHRICTLHCGHLFGKACIERWLE----ERRSCPQCGAKVGSKGSHRVIPLFLSNLTAKDT-GE---LETAMMRLEEEKRLRKQCEAERVRLAIENESLK----DRIARLTLNTISAKKQNDLTGRPT-----------------RQAPGAPACCSTPRRTVRTTASTPP---------PELSSTRDTILSTPGLRDASCLSSSTSGARRSSSLISLPASSMAMNGSSSERGTSEYGESGFGEESGMGGLRFQHTLSKGLRSGRVAEFAGGSAGALLVSQEFGSVGGAR--GAMRHGVTKCSLADFRHQK--NIFLHREQVRDVKFS--GQAGGASYVLTTSFDRTLKVCDLRTDSVVIQYSVEGNGWSCQWSATDSNQMFCGIVDGSRTSAVVLYDLRSTAGAVRKLRAAANQQQPVHSVCHTADDELLCATMGGVWAWGGGTKGGEPATSESGDREEPVAEQLQIQAGPCCSLSQSRGSGGRSDVSTRR----FLVSTRGSSASHAIFGLEASHTPSDGAAVAERAEIGGDTGATLGTTHGAWRGGAGHSLVPETIGSRRRRPVSVNSAWAERWEKLPCVAQGHQSRHALSRSLL---WA---PITDGGGLFIAGGDEGTNQPWIWDALAGQVCRRLTAHA-SPVLDVALLEENAWGVGLLAAVSQGEMKVYQ 2271
+G C IC++PWTS G HRIC+L CGHLFGK+CI+RWL+ ++ CP C + + + L++ L D G+ LE +R E E+ L++Q R + L+ D+ ++ SA + DL G T +A G+ + R++ R + P E SS+R R +S +G+ ++ L N S R + Y +G H L KG G + + V G A +TK SL D N+ +RD++ + G L S + L + L +++VVI Y++ W+C W D N+++ G+ +G+ ++ +D+R T+ + L ++ P+H++ + + + G GGG G + S S P ++ ++ P C LSQ GS V+ + S R A+ +S TPS + V A+ T L + LVP + R R + W E+ GH+S+ LSR+ + W P + GG A GDEG+N W+WD + LT+H SPVLD+ + GV LL +S+ +++Y+
Sbjct: 383 EGTTCPICMEPWTSTGNHRICSLACGHLFGKSCIKRWLKLTGKKQGKCPHCNKRARIED---LRTLYVPRLAVMDEEGQEYMLEACSLRTENEQ-LKQQVADLRQEVRRTQALLRALAPDQDDAFSMFGSSALRPQDLRGHHTPLSRRSVTAQHVSRPHHHRAHGSANYDHSSRQSGRPISERPQFEHFPFVRSGEESSSRPIPQDQQNWRRFDATNSVRAGSHA-GMIVDLEQRREENNASRPLRSFTSYNSAG------------SHGLEKGFVLQDQRSLHGAKVFDMDAQSQLLLVSGKPPDSATSSALTKMSLVDLSEGDCVNLPFGTGAIRDIRIAPAGTRAPGRLALVASLGKKLSIFSLESNNVVIAYTLPKPSWACAWDPCDPNRVYTGLQNGT----LLTFDMRQTSSPLYTLEGLSST--PIHTLQYVPESRTITDESG----TGGGR--GLLSASSSSLLFWPGIDKPHVKR-PVC-LSQPGGSSICVSVAYSAAADLMVASLRPKPATVGFNDGASSSTPSTYSQVDIPAQ---PTSCLLPEPSVS-------VLVPTHLSFVRTRRQPEQTLW----EQQQGAMVGHKSQAVLSRTAIVNAWTGRHPSQNDGGCLFASGDEGSNSVWLWDLGTPTAKQMLTSHPYSPVLDIRTT--HVAGVDLLGCISERTLQLYR 1025 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6923.18028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6923.18028.1 >prot_F-serratus_M_contig6923.18028.1 ID=prot_F-serratus_M_contig6923.18028.1|Name=mRNA_F-serratus_M_contig6923.18028.1|organism=Fucus serratus male|type=polypeptide|length=561bp MMRLEEEKRLRKQCEAERVRLAIENESLKDRIARLTLNTISAKKQNDLTGback to top mRNA from alignment at F-serratus_M_contig6923:13564..21564+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6923.18028.1 ID=mRNA_F-serratus_M_contig6923.18028.1|Name=mRNA_F-serratus_M_contig6923.18028.1|organism=Fucus serratus male|type=mRNA|length=8001bp|location=Sequence derived from alignment at F-serratus_M_contig6923:13564..21564+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6923:13564..21564+ >mRNA_F-serratus_M_contig6923.18028.1 ID=mRNA_F-serratus_M_contig6923.18028.1|Name=mRNA_F-serratus_M_contig6923.18028.1|organism=Fucus serratus male|type=CDS|length=3366bp|location=Sequence derived from alignment at F-serratus_M_contig6923:13564..21564+ (Fucus serratus male)back to top |