mRNA_F-serratus_M_contig692.18018.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig692.18018.1 vs. uniprot
Match: A0A6G6CDJ0_SACJA (Sulfotransferase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G6CDJ0_SACJA) HSP 1 Score: 248 bits (634), Expect = 2.870e-71 Identity = 134/291 (46.05%), Postives = 190/291 (65.29%), Query Frame = 1
Query: 1 GSTTLASILFRYAVRHGVKLANFGETRTVISIDEAVDLTRKRNETLSIVHYHMTSKGRLQSTWGEVMKGYRRIMTDPENIYWLTLLREPREHLLSYYYYFREPETKIPIENFLKNAGPRREF--INNTLASEFGVTTEAEALDFVQNDIPSFSLMILSERMDEGLMMLRRDLGWQMVDMTYSVLLETKAGERRGWDGRELKDRPRFSELPKQAQDTIDSLTTLDRMLYDAAKEEFEKRLERLSDEIRDDMRAFTELQSVCNGYMDANSSSGANSMYRGVNPYQQDPQFSSF 867
GST++A IL+RYAVRH +KLA G+ V A + + ++E + I+HYH+++KG L+ W + YR IM +P+N+ LT++REPREH +SYYYYF EP TK+ +E+FL + +F + N LASE GVTT ND SF +++L++R DEGLM+LRR LGW M+DMTY + ETKAG+ + DRP F +LP++ ++ IDSLT LD+M+Y AA+ ++KRL +SD I D+ F +LQ V +GY+DAN SS AN+MYR + Y P + F
Sbjct: 139 GSTSMAGILYRYAVRHNLKLARVGQESAVDPKWFATQVQQGKSERVDIMHYHISNKGHLKGLWPGARENYRGIMREPDNVNLLTMMREPREHFISYYYYFVEPATKLSLEDFLMKSHGGDDFALLKNPLASEVGVTTFHNMEQLFVNDFSSFRMILLTDRFDEGLMVLRRLLGWSMIDMTYMAMDETKAGDIA------VVDRPSFHDLPEKVRNKIDSLTELDQMVYSAAQVLYDKRLRPMSDVIGADVEEFQKLQKVVSGYLDANQSSKANAMYRAEDVYIGAPPMNQF 423
BLAST of mRNA_F-serratus_M_contig692.18018.1 vs. uniprot
Match: A0A6H5L8E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E6_9PHAE) HSP 1 Score: 239 bits (610), Expect = 1.350e-68 Identity = 131/289 (45.33%), Postives = 188/289 (65.05%), Query Frame = 1
Query: 1 GSTTLASILFRYAVRHGVKLANFGETR-TVISIDEAVDLTRKRNETLSIVHYHMTSKGRLQSTWGEVMKGYRRIMTDPENIYWLTLLREPREHLLSYYYYFREPETKIPIENFLKN---AGPR-REFINNTLASEFGVTTEAEALDFVQNDIPSFSLMILSERMDEGLMMLRRDLGWQMVDMTYSVLLETKAGERRGWDGRELKDRPRFSELPKQAQDTIDSLTTLDRMLYDAAKEEFEKRLERLSDEIRDDMRAFTELQSVCNGYMDANSSSGANSMYRGVNPYQQDP 852
GSTTLA++ +RYAVRH +KLA+FG+ + T+ ++ +A TRK E + ++HYH++ G TW + +RRIM P++I ++T+LREPR HLLS YY++ PE ++ IE++L + AG R + N L++EFGV T E F+ N +P F L++L+ERMDE L++LR LGW M+D+TY+ L T+AG RR +DG+ L DRP F L ++ Q ID LT LD+ LYDA K+EFEKRL S + ++ F ELQ Y++ NSS A MYR ++ DP
Sbjct: 66 GSTTLAAVFYRYAVRHKLKLAHFGKGKGTIANLKKAATQTRKSGELVDVMHYHISHSGEYTGTWPQAENYFRRIMRHPDSINYVTVLREPRSHLLSCYYFYIFPECELSIEDYLMDPAHAGDENRHRLRNPLSAEFGVKTAKEMNTFIVNHLPDFKLVMLTERMDESLVLLRSLLGWHMIDVTYASLNATRAGARR-YDGKPLIDRPDFCHLSEEVQARIDELTILDQALYDAGKKEFEKRLSSTSTSFQAELAGFQELQDNVCTYLEGNSSGLAREMYRSMDAVYTDP 353
BLAST of mRNA_F-serratus_M_contig692.18018.1 vs. uniprot
Match: D7FI84_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI84_ECTSI) HSP 1 Score: 234 bits (596), Expect = 8.550e-67 Identity = 126/296 (42.57%), Postives = 179/296 (60.47%), Query Frame = 1
Query: 4 STTLASILFRYAVRHGVKLANFGETR-TVISIDEAVDLTRKRNETLSIVHYHMTSKGRLQSTWGEVMKGYRRIMTDPENIYWLTLLREPREHLLSYYYYFREPETKIPIENFLKNAGPRREF------INNTLASEFGVTTEAEALDFVQNDIPSFSLMILSERMDEGLMMLRRDLGWQMVDMTYSVLLETKAGERRGWDGRELKDRPRFSELPKQAQDTIDSLTTLDRMLYDAAKEEFEKRLERLSDEIRDDMRAFTELQSVCNGYMDANSSSGANSMYRG-VNPYQQDPQFSSF 867
STT+A IL RYA RH +KLA+FG + I + EAV + E + ++HYH T+ G W E Y +IM + E I ++T++R R H LSYYYY+ +PE ++ +++F + +F + N L +EFG+ + F++ ++P F L++L+E DEGLMM+RR LGW+M+DMTYS ++ETKAG R WDG+ELK+ P + +LP QD +D+ T LD+MLYDAA + K + EI DD++ F ELQ NGY+ NSSS A Y G PY QF F
Sbjct: 48 STTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLSVQHFFGSNRQDPQFQYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGAR-WDGKELKNVPHWEDLPTWVQDRVDANTALDKMLYDAAVSHYNKMKAVAAMEIEDDLKEFDELQKTVNGYLALNSSSEAIRWYSGSAQPYLGGEQFHPF 342
BLAST of mRNA_F-serratus_M_contig692.18018.1 vs. uniprot
Match: A0A6H5JIK1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK1_9PHAE) HSP 1 Score: 232 bits (592), Expect = 3.840e-66 Identity = 125/284 (44.01%), Postives = 186/284 (65.49%), Query Frame = 1
Query: 4 STTLASILFRYAVRHGVKLANFGETRTVISIDEAVDLTRKRNETLSIVHYHMTSKGRLQSTWGEVMKGYRRIMTDPENIYWLTLLREPREHLLSYYYYFREPETKIPIENFLKNA---GPRREFINNTLASEFGVTTEAEALDFVQNDIPSFSLMILSERMDEGLMMLRRDLGWQMVDMTYSVLLETKAGERRGWDGRELKDRPRFSELPKQAQDTIDSLTTLDRMLYDAAKEEFEKRLERLSDEIRDDMRAFTELQSVCNGYMDANSSSGANSMYRGVNPYQQ 846
STT+ASI++RYA RH +KL+ FG + +V + A + T++ + + ++HYH++ +G+ TW E + YR IM +P++I ++T+LREPR HLLSYYYYF +P + IE FL + ++N L++EFGV T E F+ + +P F L+++ R+DEGL+ L R L W M+D+TY L ETK G RR WDG+ + P+F LPKQ Q+ ID LT LDR+LY+A K+EFEKRL + +++D+ F ELQ V Y++ NSSS A MY ++ Y++
Sbjct: 62 STTVASIMYRYAARHHLKLSYFGGS-SVTDLRSAANETKENGQRVDLMHYHISPRGQYMGTWNEAVTHYRVIMRNPDDINFVTVLREPRSHLLSYYYYFLQPLHQQSIEEFLLSGHRNNIEHRMLSNPLSAEFGVRTAEEMDSFISSALPDFKLVLM--RLDEGLLTLGRMLHWHMIDLTYCDLNETKEGSRR-WDGKTVVTWPQFDSLPKQVQNKIDDLTRLDRVLYEAGKDEFEKRLAPYASSVQEDIPQFQELQGVIKDYLNGNSSSLAYQMYLNMHIYKK 341
BLAST of mRNA_F-serratus_M_contig692.18018.1 vs. uniprot
Match: A0A6H5JL02_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL02_9PHAE) HSP 1 Score: 236 bits (601), Expect = 2.470e-65 Identity = 127/296 (42.91%), Postives = 181/296 (61.15%), Query Frame = 1
Query: 4 STTLASILFRYAVRHGVKLANFGETR-TVISIDEAVDLTRKRNETLSIVHYHMTSKGRLQSTWGEVMKGYRRIMTDPENIYWLTLLREPREHLLSYYYYFREPETKIPIENFLKNAGPRREF------INNTLASEFGVTTEAEALDFVQNDIPSFSLMILSERMDEGLMMLRRDLGWQMVDMTYSVLLETKAGERRGWDGRELKDRPRFSELPKQAQDTIDSLTTLDRMLYDAAKEEFEKRLERLSDEIRDDMRAFTELQSVCNGYMDANSSSGANSMYRG-VNPYQQDPQFSSF 867
STT+A IL RYA RH +KLA+FG + I + EAV + E + ++HYH T+ G W E Y +IM + E I ++T++R R H LSYYYY+ +PE ++ +++F + +F + N L +EFG+ + F++ ++P F L++L+E DEGLMM+RR LGW+M+DMTYS ++ETKAG R WDG+ELK+ PR+ +LP QD +D+ T LD+MLYDAA + + + EI DD++ F ELQ V NGY+ NSSS A Y G PY QF F
Sbjct: 237 STTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTTYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLSVQHFFGSNREDPQFQYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGTR-WDGKELKNVPRWEDLPTWVQDRVDANTALDKMLYDAAVRHYNQMKAVAAIEIEDDLKQFEELQKVVNGYLALNSSSEAIRWYSGSAQPYLGGEQFHPF 531
BLAST of mRNA_F-serratus_M_contig692.18018.1 vs. uniprot
Match: D8LRU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU8_ECTSI) HSP 1 Score: 216 bits (549), Expect = 2.810e-59 Identity = 123/289 (42.56%), Postives = 184/289 (63.67%), Query Frame = 1
Query: 4 STTLASILFRYAVRHGVKLANFGETRTVISIDEAVDLT--RKRNETLSIVHYHMTSKGRLQSTWGEVMKGYRRIMTDPENIYWLTLLREPREHLLSYYYYFREPETKIPIENFLKNAGPRREFIN----NTLASEFGVTTEAEALDFVQNDIPSFSLMILSERMDEGLMMLRRDLGWQMVDMTYSVLLETKAGERRGWDGRELKDRPRFSELPKQAQDTIDSLTTLDRMLYDAAKEEFEKRLERLSDEI-RDDMRAFTELQSVCNGYMDANSSSGANSMYRGVNPYQQD 849
STT A +L+RYA RH VKLA+F + + I + EAV T R+ I+HYH+++ G+ + +W + + YRRI+ + + + ++T++REPR HLLSYYYYF +P+T+ I FL A R+ I+ N L++EFGV + ++ +P+ +++L+E DEGLM+LRR L W+MVDMTY + +T AG RR +DG+ L + PRF +LP Q Q ID T LDR+LY+AAK E+EKR + + + +D+ F ELQ Y+ N +S AN+MY+ N Y Q+
Sbjct: 112 STTFAFLLYRYARRHNVKLAHFDDHNSAIPLREAVQQTEGRQGKGRCDIMHYHVSAFGQFEGSWRQAEQAYRRILRNTKAVNFVTVVREPRSHLLSYYYYFLQPQTQKTIGEFLTQAKHPRDPIHRRLFNPLSAEFGVKKRQDLRYVLEKALPNAKMVLLTEEFDEGLMVLRRLLRWEMVDMTYVSVYKTTAGARR-YDGKPLVNAPRFEDLPVQVQQIIDQHTELDRVLYNAAKLEYEKRRDLIPPPLLEEDLVEFHELQRTVGAYLVDNPTSKANAMYKTANIYAQE 399
BLAST of mRNA_F-serratus_M_contig692.18018.1 vs. uniprot
Match: D7G4H5_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H5_ECTSI) HSP 1 Score: 205 bits (522), Expect = 1.400e-56 Identity = 120/291 (41.24%), Postives = 174/291 (59.79%), Query Frame = 1
Query: 4 STTLASILFRYAVRHGVKLANF-GETRTVISIDEAVDLTRKRNETLSIVHYHMTSKGRLQSTWGEVMKGYRRIMTDPENIYWLTLLREPREHLLSYYYYFREPETKIPIENFLKNAGPR-REFINNTLASEFGVTTEAEALDFVQNDIPSFSLMILSERMDEGLMMLRRDLGWQMVDMTYSVLLETKAGERRGWDGRELKDRPRFSELPKQAQDTIDSLTTLDRMLYDAAKEEFEKRLERLSDEIRDDMRAFTELQSVCNGYMDANSSSGANSMYR-GVNPYQQDPQFSSF 867
STTLA I RYA RH KLA+F G + + + AV ++ + + ++HYH+ +G + TW + K Y++IM + E I ++T++R PREH LSYYYY+ +P K+ IE +L+ + + N + EFGV + + F++ +PSF+L+IL+E D GLM LRR +GW M+DMTYSV++ETK G R WD + L D PRF+ LP+ QDTID+ T LDR L++AA + + E + D+ F ELQ + Y+ ANSSS A Y PY P +F
Sbjct: 26 STTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQENGQRVDVMHYHV-HEGVWEGTWEDNTKMYKQIMQEAEPINYITVVRSPREHFLSYYYYYMQPMNKLSIEQYLERTKRHPAQHMMNPMCVEFGVHDKDQLDIFIEKHLPSFALVILTEEFDAGLMTLRRLMGWDMIDMTYSVMMETKKGVVR-WDNKPLVDVPRFASLPQWVQDTIDATTALDRKLHEAAVLAYRQAAE--VGDAEQDLVEFKELQRIVTAYLQANSSSEARRWYAPNAEPYNGGPPLYAF 312
BLAST of mRNA_F-serratus_M_contig692.18018.1 vs. uniprot
Match: A0A6H5JMW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW5_9PHAE) HSP 1 Score: 194 bits (494), Expect = 5.130e-51 Identity = 118/290 (40.69%), Postives = 171/290 (58.97%), Query Frame = 1
Query: 1 GSTTLASILFRYAVRHGVKLANFGETRTVISIDEAVDLTRKRNE--TLSIVHYHMTSKGRLQSTWGEVMKGYRRIMTDPENIYWLTLLREPREHLLSYYYYFREPETKIPIENFLKNAGPRREFINNTL---ASEFGVTTEAEALDFVQNDIPSFSLMILSERMDEGLMMLRRDLGWQMVDMTYSVLLETKAGERRGWDGRELKDRPRFSELPKQAQDTIDSLTTLDRMLYDAAKEEFEKRLERLSDEIRDDMRAFTELQSVCNGYMDANSSSGANSMYRGVNP-YQQDP 852
GSTTLA +L RY RH +++A+F + I I+EA T ++ + I+HYH+ + Q WG + YR +M P++I ++T+LR+PR+ LLS+Y +F E ET +PI+ F + P E + EFGV TE E DF+ +IP F L++++ER DE LM++R LGW +VDMTY V + +G R+G G K+R F LP+ Q+ ID LTTLDR LYDA FE+ L + ++ D+ F ELQ+V N Y+ N SS A ++Y Y +DP
Sbjct: 165 GSTTLAILLHRYGRRHDLEVAHFPGFGSTIPIEEAARQTGLADDGKRVDIMHYHIDTDTPRQERWGSAKEHYRDVMRYPDDINFITILRDPRDWLLSFYSFFVEFETGVPIDEFFRQDAPDEEVLERLRDLGCKEFGVATETELEDFIDQEIPEFKLVLVTERFDESLMVMRSLLGWDLVDMTY-VSVNRSSG-RKGKFG-VSKERVPFDHLPEDVQEKIDELTTLDRRLYDAGVAAFEESLAPFTAQVDADLEGFRELQTVVNEYLRDNPSSPAQALYSYKTAVYYEDP 451
BLAST of mRNA_F-serratus_M_contig692.18018.1 vs. uniprot
Match: D7FX25_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX25_ECTSI) HSP 1 Score: 194 bits (493), Expect = 7.730e-51 Identity = 110/290 (37.93%), Postives = 168/290 (57.93%), Query Frame = 1
Query: 4 STTLASILFRYAVRHGVKLANFGETRTVISIDEAVDLTRKRNETLSIVHYHMTSKGRLQSTWGEVMKGYRRIMTDPENIYWLTLLREPREHLLSYYYYFREPETKIPIENFL-KNAGPRREFINNTLASEFGVTTEAEALDFVQNDIPSFSLMILSERMDEGLMMLRRDLGWQMVDMTYSVLLETKAGERRGWDGRELKDRPRFSELPKQAQDTIDSLTTLDRMLYDAAKEEFEKRLERLSDEIRDDMRAFTELQSVCNGYMDANSSSGANSMYRG-VNPYQQDPQFSSF 867
STTLASIL+RY +RH +A F + T + +D A K+ + + I+HYH G TW + Y +IM++ ++ ++T+LREP H LSYYYYF P K+PI+ +L KN P ++ + N LA+EFG+ A+ F++ +P F +++L+ER DEGL +L+R L W +DMTY +L+TK GE R WDG+ L++ P+ S+L + I + T LD LY A + K + + +AF +Q V + Y++ N+SS A Y G V+ Y P +F
Sbjct: 175 STTLASILYRYGMRHDSNIAKFDQGGTYVDLDVASKQVAKQGKRVDIMHYHHAWNGFYSGTWDQATAKYAKIMSNQADVNYVTVLREPVAHYLSYYYYFLNPINKMPIDEYLLKN--PHKKLLYNPLAAEFGIEDMAQMNHFIKKQMPKFKMVLLTERFDEGLALLQRMLQWDPIDMTYCKMLQTKKGEMR-WDGKPLENVPKISDLAPEILSHIKARTQLDSRLYQAGTLLYRKYKLEFGPGVDEHFQAFQGVQKVMHRYLEMNTSSDALKWYVGDVDIYDDAPPILAF 461
BLAST of mRNA_F-serratus_M_contig692.18018.1 vs. uniprot
Match: A0A6H5JVG3_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG3_9PHAE) HSP 1 Score: 189 bits (479), Expect = 9.820e-50 Identity = 104/230 (45.22%), Postives = 147/230 (63.91%), Query Frame = 1
Query: 4 STTLASILFRYAVRHGVKLANF-GETRTVISIDEAVDLTRKRNETLSIVHYHMTSKGRLQSTWGEVMKGYRRIMTDPENIYWLTLLREPREHLLSYYYYFREPETKIPIENFLKNAGPR-REFINNTLASEFGVTTEAEALDFVQNDIPSFSLMILSERMDEGLMMLRRDLGWQMVDMTYSVLLETKAGERRGWDGRELKDRPRFSELPKQAQDTIDSLTTLDRMLYDAA 687
STTLA I RYA RH KLA+F G + + + AV ++ + + ++HYH+ +G + TW + Y++IM D E I ++T++R PREH LSYYYY+ +P K+ IE +L+ + + N + EFGV E + F++ +PSF+L+IL+E D GLM LRR +GW M+DMTYSV++ETK G R WD + L D PRF LP+ QDTID+ T LDR LY+AA
Sbjct: 126 STTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQESGQRVDVMHYHV-HEGVWEGTWEDNTNMYQQIMQDAEPINYITVVRSPREHFLSYYYYYMQPMNKLSIEQYLERTKRHPAQHMMNPMCLEFGVHDEDQLDIFIEKHLPSFALVILTEEFDAGLMTLRRLMGWDMIDMTYSVMMETKKGVVR-WDNKPLVDVPRFVSLPQWVQDTIDATTALDRKLYEAA 353 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig692.18018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig692.18018.1 >prot_F-serratus_M_contig692.18018.1 ID=prot_F-serratus_M_contig692.18018.1|Name=mRNA_F-serratus_M_contig692.18018.1|organism=Fucus serratus male|type=polypeptide|length=238bp MTSKGRLQSTWGEVMKGYRRIMTDPENIYWLTLLREPREHLLSYYYYFREback to top mRNA from alignment at F-serratus_M_contig692:272917..279339+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig692.18018.1 ID=mRNA_F-serratus_M_contig692.18018.1|Name=mRNA_F-serratus_M_contig692.18018.1|organism=Fucus serratus male|type=mRNA|length=6423bp|location=Sequence derived from alignment at F-serratus_M_contig692:272917..279339+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig692:272917..279339+ >mRNA_F-serratus_M_contig692.18018.1 ID=mRNA_F-serratus_M_contig692.18018.1|Name=mRNA_F-serratus_M_contig692.18018.1|organism=Fucus serratus male|type=CDS|length=1428bp|location=Sequence derived from alignment at F-serratus_M_contig692:272917..279339+ (Fucus serratus male)back to top |