mRNA_F-serratus_M_contig69.17992.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig69.17992.1 vs. uniprot
Match: D7FJ06_ECTSI (Epimerase/dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ06_ECTSI) HSP 1 Score: 365 bits (938), Expect = 3.190e-123 Identity = 201/269 (74.72%), Postives = 225/269 (83.64%), Query Frame = 3
Query: 120 LMLSALFTATPSAFVPSFVRERTLGSTARISHAHQTTQVLRMVYKKVFVAGGARGVGRALIDKLVAQGSEVVALVRREDAKEELDAIDGVTAEVCDALDLKGVESVLDGCDAAISTLGGIPDGDEEKRVDYTGNRNVIESAGILGITRLVLVSSVGCGSSREAISDAVYQVLENALKAKTKAENMLLKYYTNSEWTIIRPGGLKNDAATRTAILTEDSKVAGVINRADVADLVVQALNSPRTVRKILTAIDPSEDGQRD-AGRPEPFEL 923
L LS ++ T ++FV + G TAR + + Q+T LRM Y KVFVAGGA+GVGRA+IDKLV QGSEVVALVRREDAK+EL+AI GV+A VCDALDLKGVE+VLDGCDAAI+TLGG P+GDE KRVDY GNRNVIESAGILGITR+V+V+SVGCGSSREAISD VYQVLE ALKAKT AENMLLKYYTNSEWTIIRPGGLK+DAAT TAILTED+K AGVINRADVADL VQALNSP TVRKILTA+DP+ D A +P F L
Sbjct: 7 LCLSLVYLGTVTSFVTPCAWNKVTG-TARSTISGQSTG-LRMAYGKVFVAGGAKGVGRAVIDKLVDQGSEVVALVRREDAKDELEAIKGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDESKRVDYAGNRNVIESAGILGITRVVMVTSVGCGSSREAISDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTEDTKAAGVINRADVADLAVQALNSPSTVRKILTAVDPAVQSSYDSAEKPAAFAL 273
BLAST of mRNA_F-serratus_M_contig69.17992.1 vs. uniprot
Match: A0A835Z825_9STRA (Epimerase/dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z825_9STRA) HSP 1 Score: 277 bits (708), Expect = 1.450e-88 Identity = 154/255 (60.39%), Postives = 189/255 (74.12%), Query Frame = 3
Query: 162 VPSFVRERTLGSTARISHAHQTTQVLRMVYKKVFVAGGARGVGRALIDKLVAQGSEVVALVRREDAKEELDAIDGVTAEVCDALDLKGVESVLDGCDAAISTLGGIPDGDEEKRVDYTGNRNVIESAGILGITRLVLVSSVGCGSSREAISDAVYQVLENALKAKTKAENMLLKYYTNSEWTIIRPGGLKNDAATRTAILTEDSKVAGVINRADVADLVVQALNSPRTVRKILTAIDPSEDGQ-RDAGRPEPFEL 923
V +F+ ++ TAR S + L M Y KVFVAGG+ GVGR ++++LV++G +VVA+VRREDA EEL+AI+GVTA + DALDLKGVE LDGCDAAI+TLGG E RVDY GNRNVIESAGILG+TR++LV+SVGCG SR AISD VY LE AL AKTKAE ML KYYTN+ WTIIRPGGL+ T AILTE+ +AG+I RADVAD+VV+AL++ T +K+ TA+DPS DA + E F L
Sbjct: 17 VEAFLAPMSVARTARSSSS------LSMAYNKVFVAGGSSGVGREVVNQLVSKGKQVVAIVRREDALEELNAIEGVTAVMVDALDLKGVEGALDGCDAAITTLGG---SSGENRVDYEGNRNVIESAGILGVTRVILVTSVGCGDSRGAISDQVYTSLEKALVAKTKAEKMLQKYYTNAFWTIIRPGGLQTAEGTGKAILTENKTIAGIIRRADVADVVVRALDNDGTHKKVFTAVDPSIPSSFGDASKAEAFPL 262
BLAST of mRNA_F-serratus_M_contig69.17992.1 vs. uniprot
Match: A0A7S0AIJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AIJ9_9STRA) HSP 1 Score: 268 bits (686), Expect = 4.970e-85 Identity = 152/280 (54.29%), Postives = 196/280 (70.00%), Query Frame = 3
Query: 99 TMRVCRILMLSALFTATPSAFVPSFVRERTLGSTARISHAHQTTQV---LRMV--------YKKVFVAGGARGVGRALIDKLVAQGSEVVALVRREDAKEELDAIDGVTAEVCDALDLKGVESVLDGCDAAISTLGGIPD--GDEEKRVDYTGNRNVIESAGILGITRLVLVSSVGCGSSREAISDAVYQVLENALKAKTKAENMLLKYYTNSEWTIIRPGGLKNDAATRTAILTEDSKVAGVINRADVADLVVQALNSPRTVRKILTAIDPSEDGQRDA 899
T+R + L+A+ + SAF P +GS + SH H T+ LRM Y KVFVAGG+RGVGRA++D L++ GSEVVALVR ++A+ EL A+DGVT DA D K VE +DGCDAAI+T+G D G+ KRVDY GN NVIE+AGILG+TR+VLV+S+GCGSS+EA +V++VL++ L AK +AEN+L+KYYTN WTI+RPGGLK++ AT TAILTE++ G I+R DVADLVVQALNS T RKIL+A+DP +A
Sbjct: 4 TLRTALLFALAAIAASAVSAFAP-------IGSEST-SHRHATSPPATGLRMAGDAAPASKYSKVFVAGGSRGVGRAVVDGLLSAGSEVVALVRTDEAEAELSALDGVTVARGDAFDYKAVEGAMDGCDAAITTMGQGTDPVGENGKRVDYVGNNNVIEAAGILGVTRVVLVTSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNMNWTIVRPGGLKSEPATGTAILTENNLAIGSIHREDVADLVVQALNSGNTERKILSAVDPEISASANA 275
BLAST of mRNA_F-serratus_M_contig69.17992.1 vs. uniprot
Match: A0A7S3L6R6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6R6_9STRA) HSP 1 Score: 267 bits (682), Expect = 1.260e-84 Identity = 151/270 (55.93%), Postives = 189/270 (70.00%), Query Frame = 3
Query: 117 ILMLSALFTATPSAFVPSFVRERTLGSTARISHAHQTTQVLRMVYKKVFVAGGARGVGRALIDKLVAQGSEVVALVRREDAKEELDAIDGVTAEVCDALDLKGVESVLDGCDAAISTLGGIPDGDEEKRVDYTGNRNVIESAGILGITRLVLVSSVGCGSSREAISDAVYQVLENALKAKTKAENMLLKYYTNSEWTIIRPGGLKNDAATRTAILTEDSKVAGVINRADVADLVVQALNSPRTVRKILTAIDPS-EDGQRDAGRPEPFEL 923
+L+ + LF A AFVP+ +TA L YK VFVAGG++GVGR +IDKL+ QGS+VVALVR+E+ +L++I+GVTA V DA D K VE+ +DGCDAAI+TLGG D R+DY GN NVIESAGILG+ R++LV+SVGCGSS+EA +AV++ L+ L AK KAEN+L+KYYTNS W+IIRPGGLK++ AT AILTED+K G I+R DVA LVV+ L SP+T RKILTAIDPS E E F L
Sbjct: 6 LLLSTCLFLAGVQAFVPAPPLSVPPSNTA-----------LFATYKNVFVAGGSKGVGRLVIDKLLEQGSKVVALVRKEEVAADLNSIEGVTAIVGDAFDQKTVENAMDGCDAAITTLGGSTQ-DTGARIDYAGNSNVIESAGILGVQRIILVTSVGCGSSKEAAPEAVFEALKEVLLAKEKAENVLIKYYTNSNWSIIRPGGLKSEPATGNAILTEDNKTIGTIHREDVASLVVRCLESPKTERKILTAIDPSIESAVATGAEVEAFAL 263
BLAST of mRNA_F-serratus_M_contig69.17992.1 vs. uniprot
Match: B7FVE3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVE3_PHATC) HSP 1 Score: 267 bits (682), Expect = 1.440e-84 Identity = 150/262 (57.25%), Postives = 184/262 (70.23%), Query Frame = 3
Query: 120 LMLSALFTATPSAFVPSFVRERTLGSTARISHAHQTTQVLRMVYKKVFVAGGARGVGRALIDKLVAQGSEVVALVRREDAKEELDAIDGVTAEVCDALDLKGVESVLDGCDAAISTLGGIPDGDEEKRVDYTGNRNVIESAGILGITRLVLVSSVGCGSSREAISDAVYQVLENALKAKTKAENMLLKYYTNSEWTIIRPGGLKNDAATRTAILTEDSKVAGVINRADVADLVVQALNSPRTVRKILTAIDPSEDGQRDAGR 905
L+LS SAFV + T G+T + YKKVFVAGG RGVGR ++D+L+ QGSEVVALVR EDA +EL+AI+GVTA DA + K VE+ +DGCDAAI+TLGG D KRVDY GN NVIESAGILG+TR++LV+SVGCGSS+EA V++ L+ L AK KAEN+L+KYYTN WTIIRPGGLK++ AT AILTED++ G I+R DVA L ++ALNS T RK+LTAIDPS D G+
Sbjct: 7 LLLSFALVGVTSAFVAP--KAPTFGTTR-----FPVSSTSLDAYKKVFVAGGTRGVGRCIVDQLLGQGSEVVALVRSEDALKELNAIEGVTAIRGDAFEQKAVENAMDGCDAAITTLGGATS-DGGKRVDYDGNSNVIESAGILGVTRVILVTSVGCGSSKEAAPPNVFEALKEVLTAKEKAENVLIKYYTNMNWTIIRPGGLKSEPATGKAILTEDTRAIGTIHREDVAALAIKALNSSNTERKVLTAIDPSIDSAVSDGK 260
BLAST of mRNA_F-serratus_M_contig69.17992.1 vs. uniprot
Match: A0A7S2V5P0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P0_9STRA) HSP 1 Score: 267 bits (682), Expect = 1.750e-84 Identity = 143/260 (55.00%), Postives = 184/260 (70.77%), Query Frame = 3
Query: 114 RILMLSALFTATPSAFV------PSFVRERTLGSTARISHAHQTTQVLRMVYKKVFVAGGARGVGRALIDKLVAQGSEVVALVRREDAKEELDAIDGVTAEVCDALDLKGVESVLDGCDAAISTLGGIPDGDEEKRVDYTGNRNVIESAGILGITRLVLVSSVGCGSSREAISDAVYQVLENALKAKTKAENMLLKYYTNSEWTIIRPGGLKNDAATRTAILTEDSKVAGVINRADVADLVVQALNSPRTVRKILTAIDP 875
+ L + F +T AF+ SF +T + S+ + L M YKKVFVAG A+GVGR ++++LVA+ EVVA VRRE+AK+EL + GVTA + DAL K VE +DGCDAA++TLG P ++ +VDY GN NVIE+AGILG+TR +LV+SVGCG S+EA+S Y+ LENALKAK KAE +L KYYTNS+WT+IRPGGL N AT A+LTE+ GVINRADVA LVV+AL+S +T RK+LTA+DP
Sbjct: 14 KALAIKMKFISTALAFIMMVISCESFRTPSIQIATRKSSNLNANRAQLEMAYKKVFVAGAAKGVGRQIVEQLVAKDVEVVAFVRREEAKQELGGLKGVTAILGDALVQKDVEGAMDGCDAAVTTLGSAPTDEQRWKVDYDGNVNVIEAAGILGVTRCILVTSVGCGDSKEAVSPDAYEKLENALKAKEKAERVLTKYYTNSDWTVIRPGGLMNGEATSAAVLTENKMACGVINRADVASLVVKALDSQKTFRKVLTAVDP 273
BLAST of mRNA_F-serratus_M_contig69.17992.1 vs. uniprot
Match: A0A7S2UDM5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDM5_9STRA) HSP 1 Score: 265 bits (677), Expect = 1.250e-83 Identity = 144/256 (56.25%), Postives = 190/256 (74.22%), Query Frame = 3
Query: 120 LMLSALFTATPSAFVPS--FVRERTLGSTARISHA--HQTTQVLRMVYKKVFVAGGARGVGRALIDKLVAQGSEVVALVRREDAKEELDAIDGVTAEVCDALDLKGVESVLDGCDAAISTLGGIPDGDEEKRVDYTGNRNVIESAGILGITRLVLVSSVGCGSSREAISDAVYQVLENALKAKTKAENMLLKYYTNSEWTIIRPGGLKNDAATRTAILTEDSKVAGVINRADVADLVVQALNSPRTVRKILTAIDP 875
L +AL SAFVP+ FV RT S+A+ S++ + Y KVFVAGG++GVGR ++DKLV G+ VVALVR E+A EL+A+DGVTA + DA D K VE +DGCDAA+STLGG + ++RVDY GN NVIE+AGILG+TR+VL++S+GCGSS+EA +V++VL++ L AK +AEN+L+KYYTN+ WTIIRPGGLK++ AT AILTED+ G I+R DVA L +QAL SP+T +KIL+A+DP
Sbjct: 7 LAAAALLAGVCSAFVPASTFV-SRTTASSAKKSYSSLYMVEGQGGQTYNKVFVAGGSKGVGRLVVDKLVGSGTGVVALVRSEEAAAELNALDGVTAVIGDAFDYKAVEGAMDGCDAAMSTLGGGTVEEGKQRVDYEGNSNVIEAAGILGVTRVVLITSIGCGSSKEAAPPSVFEVLKDVLSAKERAENILIKYYTNTNWTIIRPGGLKSEPATGKAILTEDNMAIGSIHREDVAALAIQALTSPKTKQKILSAVDP 261
BLAST of mRNA_F-serratus_M_contig69.17992.1 vs. uniprot
Match: A0A6U3NUE1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NUE1_9STRA) HSP 1 Score: 265 bits (676), Expect = 1.650e-83 Identity = 142/257 (55.25%), Postives = 190/257 (73.93%), Query Frame = 3
Query: 114 RILMLSALFTATPSAFVPSFVRERTLGSTARISHAHQTTQVLRMV--YKKVFVAGGARGVGRALIDKLVAQGSEVVALVRREDAKEELDAIDGVTAEVCDALDLKGVESVLDGCDAAISTLGGIPDGDEEKRVDYTGNRNVIESAGILGITRLVLVSSVGCGSSREAISDAVYQVLENALKAKTKAENMLLKYYTNSEWTIIRPGGLKNDAATRTAILTEDSKVAGVINRADVADLVVQALNSPRTVRKILTAIDPS 878
R+L+LSAL S P+FV RT+ ST + A + L + YKKVFVAGG++GVGR ++DKL+ GSEVVALVR ++A +EL A++GVTA + DA + K VE +DGCDAAI+TLG G++ KRVDY GN NVIE+AGILG+TR++L++S+GCGSS+EA +V++VL++ L AK +AEN+L+KYYTN WTIIRPGGLK++ T AILTED+ G I+R DVA L V+AL S +T RK+L+A+D S
Sbjct: 5 RLLILSALVAIVASFAPPAFVSTRTI-STIKDGVASSASSSLTSLDAYKKVFVAGGSKGVGRHIVDKLIEDGSEVVALVRSQEAIDELSALEGVTAILGDAFEYKNVEGAMDGCDAAITTLGQGTAGEDGKRVDYEGNSNVIEAAGILGVTRVILITSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNMNWTIIRPGGLKSEPGTGEAILTEDAMAIGSIHREDVAALAVKALTSSKTERKVLSAVDQS 260
BLAST of mRNA_F-serratus_M_contig69.17992.1 vs. uniprot
Match: A0A7S2HK64_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HK64_9STRA) HSP 1 Score: 261 bits (668), Expect = 2.930e-82 Identity = 143/259 (55.21%), Postives = 189/259 (72.97%), Query Frame = 3
Query: 114 RILMLSALFTATPSA-FVPSFVRERTLGS---TARISHAHQTTQVLRMVYKKVFVAGGARGVGRALIDKLVAQGSEVVALVRREDAKEELDAIDGVTAEVCDALDLKGVESVLDGCDAAISTLGGIPDGDEEKRVDYTGNRNVIESAGILGITRLVLVSSVGCGSSREAISDAVYQVLENALKAKTKAENMLLKYYTNSEWTIIRPGGLKNDAATRTAILTEDSKVAGVINRADVADLVVQALNSPRTVRKILTAIDPS 878
R+L LSAL A S V SF LGS + + S + T YKKVFVAGG++GVGR ++DKL+ GSEVVALVR ++A +EL AIDGVT + DA + K VE+ +DGCDAAI+TLG ++ KRVDY GN NVIE+AGILG+TR++LV+S+GCGSS+EA +V++VL++ L AK +AEN+L+KYYTN+ WTI+RPGGLK++ AT AILTED+ G I+R DVA L+V+AL S +T RK+L+A+D S
Sbjct: 5 RLLALSALGAALFSCQLVASFAPPAFLGSRRTSTQASGSSSATTTSLDAYKKVFVAGGSKGVGRLIVDKLIEDGSEVVALVRSQEAVDELGAIDGVTPILGDAFEYKNVENAMDGCDAAITTLGQGSATEDGKRVDYEGNSNVIEAAGILGVTRVILVTSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNTNWTIVRPGGLKSEPATGEAILTEDAMAIGSIHREDVASLIVKALTSSKTERKVLSAVDQS 263
BLAST of mRNA_F-serratus_M_contig69.17992.1 vs. uniprot
Match: B8C036_THAPS (NAD(P)-bd_dom domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C036_THAPS) HSP 1 Score: 257 bits (657), Expect = 1.130e-80 Identity = 150/280 (53.57%), Postives = 197/280 (70.36%), Query Frame = 3
Query: 102 MRVCRILMLSALFTATPSAFVPS-FVRERTLGSTARISHAHQTTQVLRMV------YKKVFVAGGARGVGRALIDKLVAQGSEVVALVRREDAKEELDAIDGVTAEVCDALDLKGVESVLDGCDAAISTLGG---IPDGDEEKRVDYTGNRNVIESAGILGITRLVLVSSVGCGSSREAISDAVYQVLENALKAKTKAENMLLKYYTNSEWTIIRPGGLKNDAATRTAILTEDSKVAGVINRADVADLVVQALNSPRTVRKILTAIDPSEDGQRDAGRPE 911
M R+L+ +AL A+ SAF P+ FV+ R++ A L MV YKKVFVAGG++GVGR ++DKLV+ G+EVVALVR ++A +EL A+DGVTA DA+D K VE +DGCDAAI+TLGG + +G EK VDY GN NVIE+AGILG+TR+VLV+S+GCGSS+EA +VY+VL++ L K KAE +L +YYTN WTI+RPGGL ++ T A+LTED+ G I+R DVADLVV+AL+S T +KIL+A+DPS + A PE
Sbjct: 1 MNPLRLLLATALAAAS-SAFAPTAFVQ--------RVAPAPTQRSALYMVQGQGDSYKKVFVAGGSKGVGRLVVDKLVSNGAEVVALVRSDEAVDELSALDGVTAIKGDAMDYKTVEGAMDGCDAAITTLGGGHNVAEG--EKYVDYVGNNNVIEAAGILGVTRVVLVTSIGCGSSKEATPPSVYEVLKDVLVQKEKAEKVLTRYYTNMNWTIVRPGGLVSEPPTGKAVLTEDTMAIGSIHRGDVADLVVKALSSKNTEKKILSAVDPSIES---ASNPE 266 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig69.17992.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig69.17992.1 >prot_F-serratus_M_contig69.17992.1 ID=prot_F-serratus_M_contig69.17992.1|Name=mRNA_F-serratus_M_contig69.17992.1|organism=Fucus serratus male|type=polypeptide|length=275bp MRVCRILMLSALFTATPSAFVPSFVRERTLGSTARISHAHQTTQVLRMVYback to top mRNA from alignment at F-serratus_M_contig69:907302..909457+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig69.17992.1 ID=mRNA_F-serratus_M_contig69.17992.1|Name=mRNA_F-serratus_M_contig69.17992.1|organism=Fucus serratus male|type=mRNA|length=2156bp|location=Sequence derived from alignment at F-serratus_M_contig69:907302..909457+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig69:907302..909457+ >mRNA_F-serratus_M_contig69.17992.1 ID=mRNA_F-serratus_M_contig69.17992.1|Name=mRNA_F-serratus_M_contig69.17992.1|organism=Fucus serratus male|type=CDS|length=1650bp|location=Sequence derived from alignment at F-serratus_M_contig69:907302..909457+ (Fucus serratus male)back to top |