mRNA_F-serratus_M_contig69.17975.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig69.17975.1 vs. uniprot
Match: D7G3S8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S8_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 6.550e-15 Identity = 85/264 (32.20%), Postives = 109/264 (41.29%), Query Frame = 2
Query: 479 GPRSSSTRSVLSHGSTGSSINPKA---SVSAAVKAAADGDARSVVQFLNSGGDINAKCKTSASTPLSRAAAKGHLKIVKLLLDRGAGVNIPGRGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSGTSVEVTKLLLEFGADPNAQDKNGQRPDAMAISHEARGLLRDARCTVREDTVGNNASRVGHRSLPSNSSGGPTAVFPDPVIASLRRELENLEREAQAAKEAASEEEVRRKEVQLEVDELRGHVSKLSQE 1261
G R S +R + G + S +P A S A+KAAA+GD +V+ FL++GGD+N K K RGGL T L G QDKNGQRPDAMA+ HE+R LLRDARC VRE VG+N VIASLRRELENLE E + AK EE RR E+++E++ LR + +L ++
Sbjct: 164 GSRGSGSRLSVGSGFSVGSSSPGALNGSSHIALKAAAEGDEAAVLAFLDAGGDVNTKSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGL---------------------------------------------TALHEAAGC---GQDKNGQRPDAMAVDHESRALLRDARCAVREYAVGDN------------------------VIASLRRELENLEAEVEGAKAKVKEEASRRVELEIELETLRARMEELQKQ 355
BLAST of mRNA_F-serratus_M_contig69.17975.1 vs. uniprot
Match: A0A3R7G3B8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G3B8_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 5.780e-5 Identity = 45/142 (31.69%), Postives = 61/142 (42.96%), Query Frame = 2
Query: 572 AAADGDARSVVQFLNSGGDINAKCKTSASTPLSRAAAKGHLKIVKLLLDRGAGVNIPGRGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSGTSVEVTKLLLEFGADPNAQDKNGQRPDAMAISHEARGLLR 997
AA+DGD SV FL SGGD NAK + TPL A + H+++V LL GA + + +VE TK+LLE+GAD NA++ +GQ P +AI L+R
Sbjct: 6 AASDGDIESVRGFLASGGDANAKDEYGY-TPLQAAVSYNHIELVVFLLASGAQATL----------------------------------GDNEKDTPLHRCETVECTKVLLEYGADLNARNADGQTPYDVAIEDGHEELVR 112 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig69.17975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig69.17975.1 >prot_F-serratus_M_contig69.17975.1 ID=prot_F-serratus_M_contig69.17975.1|Name=mRNA_F-serratus_M_contig69.17975.1|organism=Fucus serratus male|type=polypeptide|length=902bp MDSTLDDAEAAAAATTTPPRNETEDHDSTDVRAATRGDEIPSSTKPPRRDback to top mRNA from alignment at F-serratus_M_contig69:333292..353564- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig69.17975.1 ID=mRNA_F-serratus_M_contig69.17975.1|Name=mRNA_F-serratus_M_contig69.17975.1|organism=Fucus serratus male|type=mRNA|length=20273bp|location=Sequence derived from alignment at F-serratus_M_contig69:333292..353564- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig69:333292..353564- >mRNA_F-serratus_M_contig69.17975.1 ID=mRNA_F-serratus_M_contig69.17975.1|Name=mRNA_F-serratus_M_contig69.17975.1|organism=Fucus serratus male|type=CDS|length=5412bp|location=Sequence derived from alignment at F-serratus_M_contig69:333292..353564- (Fucus serratus male)back to top |