mRNA_F-serratus_M_contig69.17970.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig69.17970.1
Unique NamemRNA_F-serratus_M_contig69.17970.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig69.17970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig69contigF-serratus_M_contig69:287690..289462 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size664
Cds size660
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig69.17970.1prot_F-serratus_M_contig69.17970.1Fucus serratus malepolypeptideF-serratus_M_contig69 287692..289462 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932102.8485453-CDS-F-serratus_M_contig69:287691..2879131622932102.8485453-CDS-F-serratus_M_contig69:287691..287913Fucus serratus maleCDSF-serratus_M_contig69 287692..287913 -
1690964148.0176911-CDS-F-serratus_M_contig69:287691..2879131690964148.0176911-CDS-F-serratus_M_contig69:287691..287913Fucus serratus maleCDSF-serratus_M_contig69 287692..287913 -
1622932102.8672564-CDS-F-serratus_M_contig69:288281..2884251622932102.8672564-CDS-F-serratus_M_contig69:288281..288425Fucus serratus maleCDSF-serratus_M_contig69 288282..288425 -
1690964148.0341458-CDS-F-serratus_M_contig69:288281..2884251690964148.0341458-CDS-F-serratus_M_contig69:288281..288425Fucus serratus maleCDSF-serratus_M_contig69 288282..288425 -
1622932102.89833-CDS-F-serratus_M_contig69:288668..2888421622932102.89833-CDS-F-serratus_M_contig69:288668..288842Fucus serratus maleCDSF-serratus_M_contig69 288669..288842 -
1690964148.054524-CDS-F-serratus_M_contig69:288668..2888421690964148.054524-CDS-F-serratus_M_contig69:288668..288842Fucus serratus maleCDSF-serratus_M_contig69 288669..288842 -
1622932102.9222102-CDS-F-serratus_M_contig69:289342..2894621622932102.9222102-CDS-F-serratus_M_contig69:289342..289462Fucus serratus maleCDSF-serratus_M_contig69 289343..289462 -
1690964148.0749636-CDS-F-serratus_M_contig69:289342..2894621690964148.0749636-CDS-F-serratus_M_contig69:289342..289462Fucus serratus maleCDSF-serratus_M_contig69 289343..289462 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig69.17970.1

>prot_F-serratus_M_contig69.17970.1 ID=prot_F-serratus_M_contig69.17970.1|Name=mRNA_F-serratus_M_contig69.17970.1|organism=Fucus serratus male|type=polypeptide|length=220bp
RLEAARKELETKAIDTAAERASDLDRLRAQAFADVTSRLEELEKERTRLQ
KELHEKEEAFKELSAQKEEADASYSQLRTETSELRVRAKRTERDINIKLQ
AAYDKLASAKNDLSAAKAAEASALARADDLQANVQRLEGALTDSVKENTG
LRASARDTAARAAADNHELVARLEVAAAGARDAEDRAAGFCTRIQELSAA
SATETQEAAAALTQNAAEVA
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mRNA from alignment at F-serratus_M_contig69:287690..289462-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig69.17970.1 ID=mRNA_F-serratus_M_contig69.17970.1|Name=mRNA_F-serratus_M_contig69.17970.1|organism=Fucus serratus male|type=mRNA|length=1773bp|location=Sequence derived from alignment at F-serratus_M_contig69:287690..289462- (Fucus serratus male)
AGGCTCGAGGCGGCCCGGAAAGAGCTGGAGACAAAAGCCATTGACACAGC
CGCAGAGAGAGCCTCCGACCTGGATCGGCTTCGAGCCCAGGCCTTCGCGG
ATGTAACTTCGAGGCTCGAGGTGTGTCGGTTCGTGGGTTTTTTTTGCCCG
TGTGAGTATTATGGATTGGTGGCAGTAACACCAATAGTACTGTAATATTC
ATGTATGGGATCGATTTTGTGCGCGTGTGTAAGAGAAAGAGGCACGATCG
CCTTCGCGCCAACCTTAAGGCTGCTGTGCGGATAGTGTGCAGTGTTCGGC
GGAAAATTTCGGCCTTGAACGAATCCAATTTGCTCAATCAAACAGTAATG
GTTGAGGAAGACATGGATAACGATTATCCTTACCGTAGCTACAATTTTAT
TTTCGTCTTGGACGTTGCAGATTGACTTGAGAGGTTCTAAATATATTTAT
TTTCTTTCCTTTTCGCAGCCTTACCTAATTGTTTTCTCTAGACAAAGACC
TATTATACTATTATTAGTATAGAACTATTAATACCTGTATACCTTACGTC
CGAGTACTCTCAGGATTAAAGACCTATTAATGTTAGTAGTATAATCTTGA
AGCTAAACATAACAACACAGGAGCTCGAGAAAGAAAGGACCAGACTGCAA
AAGGAGTTGCACGAGAAAGAAGAGGCGTTCAAGGAGCTTTCGGCGCAAAA
AGAAGAGGCGGATGCGTCGTATTCCCAGCTGAGGACGGAGACATCCGAAC
TCCGGGTTCGCGCGAAGAGGACGGAGAGGGACATTAACATAAAGGTGCAT
CGCTTCGCTGCTTTCACTAGCTGGTTCGTGATACAATGCAGTAGTAGCTC
TATAAACTATATTTGTGGACCCTATTCTTGTTCTGATCACGTGTTGTCCC
GTGGCCCGGATAGAGGGTTGAAAATGCCTCTTTCGGTTATGTCCGTCGTT
CGACCAGCGGACAGGGTTCTTTCCCTTACCTTGCCTGAATTCCCGTCCGT
GTCTCTTTGATCTCTCTGCGTATCCCTTTTATACCAGCTTCAAGCCGCCT
ATGACAAGCTCGCCTCGGCCAAGAATGACCTTTCAGCGGCTAAGGCTGCC
GAGGCGTCGGCGTTAGCGAGGGCAGACGATCTCCAGGCGAACGTCCAGCG
CTTAGAGGGGGCATTGACGGACTCGGTGAAGGTGTGTATGATGCTTTCGC
ATGTTTTGTACGCGATATTTATCTCTGTAGGATTATTTTTGATTGATTTA
TCGCTTACAATAGCTGGTTGGTTTGGGCCACCAAGGAAGATGTGTTGATT
CCTTCACGTTGGGAGAGGAGAAAGCAACTGCTCCCAGGTACTTTAGAGCT
CTGTTAATCCTATGAATACCGTGTAAGGGTAAATCATACCCGGCCGGTAC
AGTTTGCAGCAAGCTTGGGAGGCGAACAGTATCGGGGCTTGATCCCTCAC
GATTCTCGAAACCGATCATATACTTCCCCGCCTCGTCTGTGCATGTGTTT
CTGTGTCGCTTTGTGTCTGTGTACGTTTTTAATCGACTTTAATAAAAAGG
AAAATACTGGACTGAGAGCTTCTGCCCGAGACACCGCTGCCCGTGCCGCG
GCTGATAACCACGAGCTCGTTGCCCGCCTCGAGGTGGCTGCGGCGGGCGC
CCGAGACGCCGAAGACCGCGCTGCGGGGTTCTGTACCCGTATCCAGGAGC
TGTCCGCGGCAAGCGCCACTGAAACGCAGGAGGCGGCCGCCGCTTTAACT
CAGAATGCCGCGGAGGTGGCCTC
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Coding sequence (CDS) from alignment at F-serratus_M_contig69:287690..289462-

>mRNA_F-serratus_M_contig69.17970.1 ID=mRNA_F-serratus_M_contig69.17970.1|Name=mRNA_F-serratus_M_contig69.17970.1|organism=Fucus serratus male|type=CDS|length=1320bp|location=Sequence derived from alignment at F-serratus_M_contig69:287690..289462- (Fucus serratus male)
AGGCTCGAGGCGGCCCGGAAAGAGCTGGAGACAAAAGCCATTGACACAGC
CGCAGAGAGAGCCTCCGACCTGGATCGGCTTCGAGCCCAGGCCTTCGCGG
ATGTAACTTCGAGGCTCGAGAGGCTCGAGGCGGCCCGGAAAGAGCTGGAG
ACAAAAGCCATTGACACAGCCGCAGAGAGAGCCTCCGACCTGGATCGGCT
TCGAGCCCAGGCCTTCGCGGATGTAACTTCGAGGCTCGAGGAGCTCGAGA
AAGAAAGGACCAGACTGCAAAAGGAGTTGCACGAGAAAGAAGAGGCGTTC
AAGGAGCTTTCGGCGCAAAAAGAAGAGGCGGATGCGTCGTATTCCCAGCT
GAGGACGGAGACATCCGAACTCCGGGTTCGCGCGAAGAGGACGGAGAGGG
ACATTAACATAAAGGAGCTCGAGAAAGAAAGGACCAGACTGCAAAAGGAG
TTGCACGAGAAAGAAGAGGCGTTCAAGGAGCTTTCGGCGCAAAAAGAAGA
GGCGGATGCGTCGTATTCCCAGCTGAGGACGGAGACATCCGAACTCCGGG
TTCGCGCGAAGAGGACGGAGAGGGACATTAACATAAAGCTTCAAGCCGCC
TATGACAAGCTCGCCTCGGCCAAGAATGACCTTTCAGCGGCTAAGGCTGC
CGAGGCGTCGGCGTTAGCGAGGGCAGACGATCTCCAGGCGAACGTCCAGC
GCTTAGAGGGGGCATTGACGGACTCGGTGAAGCTTCAAGCCGCCTATGAC
AAGCTCGCCTCGGCCAAGAATGACCTTTCAGCGGCTAAGGCTGCCGAGGC
GTCGGCGTTAGCGAGGGCAGACGATCTCCAGGCGAACGTCCAGCGCTTAG
AGGGGGCATTGACGGACTCGGTGAAGGAAAATACTGGACTGAGAGCTTCT
GCCCGAGACACCGCTGCCCGTGCCGCGGCTGATAACCACGAGCTCGTTGC
CCGCCTCGAGGTGGCTGCGGCGGGCGCCCGAGACGCCGAAGACCGCGCTG
CGGGGTTCTGTACCCGTATCCAGGAGCTGTCCGCGGCAAGCGCCACTGAA
ACGCAGGAGGCGGCCGCCGCTTTAACTCAGAATGCCGCGGAGGTGGCCGA
AAATACTGGACTGAGAGCTTCTGCCCGAGACACCGCTGCCCGTGCCGCGG
CTGATAACCACGAGCTCGTTGCCCGCCTCGAGGTGGCTGCGGCGGGCGCC
CGAGACGCCGAAGACCGCGCTGCGGGGTTCTGTACCCGTATCCAGGAGCT
GTCCGCGGCAAGCGCCACTGAAACGCAGGAGGCGGCCGCCGCTTTAACTC
AGAATGCCGCGGAGGTGGCC
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