mRNA_F-serratus_M_contig688.17941.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig688.17941.1 vs. uniprot
Match: A0A6H5KKA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKA5_9PHAE) HSP 1 Score: 502 bits (1292), Expect = 8.600e-167 Identity = 269/388 (69.33%), Postives = 308/388 (79.38%), Query Frame = 3
Query: 234 KMKMLCT-TAVIAACATASLPGGQSFFTPAPKPTLSASFIGGDA---SGGPGVGKDRRSHRRRRAPSSAVQMVSMEPRVTATTGSLPATPATSIPARPAGKEGPHLPWTGSVAGSEFPLSYMSFLEHMLNVLASSFGDMRAMPLADRLAFVENPDKKARMLSMSFTSPEVRKLRLTYFDAGDKVQVLNAVIYPDTSLDMPLLGIDLISFGGKHLAGIDFQPLFDDETCRSRYAEKLAPIKAKYPEFSQKMSAKFYDSARFFSEEMLFGRYEDASIIDERLFPAFEEYLSTYIAELLAAAAEGGDPSPASRARVLDRHRAYDQYNAERDPAHGLFRNYYGEAFSEEFMDNFLFELSTRPPEGYSKPSASGQCRGGQQSSGVKAHARPRA 1385
+ + LC +AVIA A ASLP G F P + S + S PG G+ RR+ RRR PS AV MV+MEPRV S + T PARP GKEGPHLPWTGS+AG EFPL+YM F+EHMLNVLA SFG+M A+PLAD+LAFVEN DKKARMLSMSF SPEVRK+RLTYFDAGDKVQVLNAVIYPD SLDMPLLGIDLISFGGKHLAGIDFQPLFD+++CR RY++KLAPIKAKYPEF+QKMS +FYDSARFFSEEMLFGRYED +I++E+LFPAF+EYLS YI++LL AA EGG+PSP ++ARVLDRHRAYDQYNAERDPAHGLFR Y+GEA+SE+FMDNFLFELSTRP GY K +A G GG ++G A P A
Sbjct: 57 RRRTLCAFSAVIAGYAAASLPCGAGFVAPGVQQAGGRSAAAVPSYVRSAAPGGGETRRAGMRRRRPSDAVHMVAMEPRV----NSKGSATETVAPARPPGKEGPHLPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVENTDKKARMLSMSFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGIDFQPLFDNDSCRCRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVEEKLFPAFDEYLSLYISDLLKAAEEGGNPSPEAQARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLFELSTRPEGGYPKGTARG---GGGGANGRPAGGNPHA 437
BLAST of mRNA_F-serratus_M_contig688.17941.1 vs. uniprot
Match: D8LGZ4_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ4_ECTSI) HSP 1 Score: 362 bits (929), Expect = 2.810e-115 Identity = 189/256 (73.83%), Postives = 211/256 (82.42%), Query Frame = 3
Query: 612 VLASSFGDMRAMPLADRLAFVENPDKKARMLSMSFTSPEVRKLRLTYFDAGDKVQVLNAVIYPDTSLDMPLLGIDLISFGGKHLAGIDFQPLFDDETCRSRYAEKLAPIKAKYPEFSQKMSAKFYDSARFFSEEMLFGRYEDASIIDERLFPAFEEYLSTYIAELLAAAAEGGDPSPASRARVLDRHRAYDQYNAERDPAHGLFRNYYGEAFSEEFMDNFLFELSTRPPEGYSKPSASGQCRGGQQSSGVKAHARP 1379
+L SS D P+A R E K A SM+F SPEVRK+RLTYFDAGDKVQVLNAVIYPD SLDMPLLGIDLISFGGKHLAGIDFQPLFDD++CR+RY++KLAPIKAKYPEF+QKMS +FYDSARFFSEEMLFGRYED +I+DE+LFPAFEEYLS YI++LL AA EGG+PSP +RARVLDRHRAYDQYNAERDPAHGLFR Y+GEA+SE FMDNFLFEL+TRP GY K G RGG G A+ RP
Sbjct: 17 LLVSSLTD----PVAPRPP--ETTTKNACNTSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGIDFQPLFDDDSCRNRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFEEYLSLYISDLLKAAEEGGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSENFMDNFLFELNTRPAGGYPK----GAARGG----GGGANGRP 258
BLAST of mRNA_F-serratus_M_contig688.17941.1 vs. uniprot
Match: A0A835YZG6_9STRA (Ferredoxin-dependent bilin reductase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZG6_9STRA) HSP 1 Score: 282 bits (721), Expect = 4.970e-83 Identity = 146/261 (55.94%), Postives = 180/261 (68.97%), Query Frame = 3
Query: 537 LPWTGSVAGSEFPLSYMSFLEHMLNVLASSFGDMRAMPLADRLAFVEN--PDKKARMLSMSFTSPEVRKLRLTYFDAGDKVQVLNAVIYPDTSLDMPLLGIDLISFGGKHLAGIDFQPLFDDETCRSRYAEKLAPIKAKYPEFSQKMSAKFYDSARFFSEEMLFGRYEDASIIDERLFPAFEEYLSTYIAELLAAAAEGGDPSPASRARVLDRHRAYDQYNAERDPAHGLFRNYYGEAFSEEFMDNFLFELSTRPPEGYSK 1313
LPW S AG+E PL YM F+++ L L S +++ P+ + +A + P K R+ S+ F P +RK RLTYFDAG VQV N V+YPD S+D P+LG+DLI+FG KHLAGIDFQPL D RY L IKA+YP+ SQ MSA+FYDSARFFS MLF R+ED ++ +LFPAF EYLS Y+ E+L+ A P R VL+RH AYDQYNAERDPAHGLF Y+G +SE+FMD+FLFELSTRP EGY K
Sbjct: 116 LPWIESCAGAEHPLLYMPFMDYSLEQLVSQL-ELQPTPMDEEMALQHSLHPAKPGRIASLLFNGPLIRKARLTYFDAGPAVQVFNMVVYPDPSIDAPILGVDLIAFGKKHLAGIDFQPLHADAGYADRYLSTLGDIKARYPDLSQTMSARFYDSARFFSPHMLFARFEDRDLVPSQLFPAFSEYLSEYV-EMLSKAPRVSTPE--FRDAVLERHTAYDQYNAERDPAHGLFVQYFGHEWSEKFMDDFLFELSTRPEEGYPK 372
BLAST of mRNA_F-serratus_M_contig688.17941.1 vs. uniprot
Match: M2XA99_GALSU (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XA99_GALSU) HSP 1 Score: 214 bits (544), Expect = 6.010e-59 Identity = 115/249 (46.18%), Postives = 160/249 (64.26%), Query Frame = 3
Query: 543 WTGSVAGSEFPLSYMSFLEHMLNVLASSFGDMRAMPLADRLAFVENPDKKARMLSMSFTSPEVRKLRLTYFDAGDKVQVLNAVIYPDTSLDMPLLGIDLISFGGKH-LAGIDFQPLFDDETCRSRYAEKLAPIKAKYPEFSQKMSAKFYDSARFFSEEMLFGRYEDASIIDERLFPAFEEYLSTYIAELLAAAAEGGDPSPASRARVLDRHRAYDQYNAERDPAHGLFRNYYGEAFSEEFMDNFLFELS 1286
W SVAGS+ P+ Y FLE M N L +SF + PL++ LA ++ K AR+ S + P+ RK+RLTY DAG QV NAV YP +SL++P+LG+D +SFGGK+ L +DFQPL +D+ +Y + L PI+ +Y + + +MS++FYD RFFS+E+LFGR++ I ERLFPAF EYL YI LA D S R+ + YD+Y+AE+DPA LFR+Y+G ++ F+ FLFE S
Sbjct: 59 WKTSVAGSDIPMIYSPFLEDMQNTLFASFETVEDYPLSEFLASAQSSKKPARIESWCYQCPKFRKIRLTYLDAGVAAQVFNAVWYPISSLELPILGVDFLSFGGKNVLCVMDFQPLMNDQYYLDKYIQPLHPIRERYADLAGRMSSRFYDENRFFSKELLFGRFDSTKPIYERLFPAFREYLDLYIT--LAKQTVEDDKS---RSIIWQLQCEYDRYSAEKDPAMSLFRSYFGSTWAHRFVYEFLFENS 302
BLAST of mRNA_F-serratus_M_contig688.17941.1 vs. uniprot
Match: A0A5J4YL15_PORPP (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL15_PORPP) HSP 1 Score: 214 bits (544), Expect = 7.380e-59 Identity = 119/255 (46.67%), Postives = 157/255 (61.57%), Query Frame = 3
Query: 537 LPWTGSVAGSEFPLSYMSFLEHMLNVLASSFGDMRAMPLADRLAFVENPDKKARMLSMSFTSPEVRKLRLTYFDAGDKVQVLNAVIYPDTSLDMPLLGIDLISFGGKHLAGI-DFQPLFDDETCRSRYAEKLAPIKAKYPEFSQKMSAKFYDSARFFSEEMLFGRYEDASIIDERLFPAFEEYLSTYIAELLAAAAEGGDPSPASRARVLDRHRAYDQYNAERDPAHGLFRNYYGEAFSEEFMDNFLFELSTRPP 1298
LP+ S+AG EF L +M F+ H V+ +F + +P D LAF + K AR+ S + +PE RK+R TY DAG + QV N+V YPD D+PLLGID +SFG K + I DFQPL D +Y LAP+KAKY + +MSAKFYD FFS+++ FGR+++A + E LFPAF+EYL Y E + +A DP A L R + YDQY+AERDPA GLF Y+G ++E+F FLFE S P
Sbjct: 66 LPYERSIAGEEFELLFMPFVLHQNKVMRDTF-QVSDLPFDDELAFQSSTKKAARIESWCYKTPEFRKIRSTYIDAGIQAQVFNSVWYPDPKYDLPLLGIDFLSFGKKKVICIMDFQPLTQDAAYLEKYISPLAPVKAKYKSLAGEMSAKFYDENVFFSKQLAFGRFDNAGPVMEELFPAFKEYLDVYF-EHMQSATPTSDPEQI--ALNLQRQKDYDQYSAERDPAIGLFSTYFGPEWAEKFTHEFLFEHSVPVP 316
BLAST of mRNA_F-serratus_M_contig688.17941.1 vs. uniprot
Match: A0A7S0YZG3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YZG3_9CRYP) HSP 1 Score: 215 bits (547), Expect = 8.140e-59 Identity = 115/258 (44.57%), Postives = 159/258 (61.63%), Query Frame = 3
Query: 537 LPWTGSVAGSEFPLSYMSFLEHMLNVLASSFGDMRAMPLADRLAFVENPDKK--ARMLSMSFTSPEVRKLRLTYFDAGDKVQVLNAVIYPDTSLDMPLLGIDLISFG-GKHLAGIDFQPLFDDETCRSRYAEKLAPIKAKYPEFSQKMSAKFYDSARFFSEEMLFGRYEDASIIDERLFPAFEEYLSTYIAELLAAAAEGGDPSPASRARVLDRHRAYDQYNAERDPAHGLFRNYYGEAFSEEFMDNFLFELSTRPPE 1301
+PWT SV G E L YM F+E + +F + P A+ L+F P+KK A + S F + RK+R+TY DAG + QV N VIYP+ D+P+LGID +SFG + LA +D QPL D RY + L PI++KY + +MS+KFYD ARFFS+E+LFG+++D S + E LFPAF+EY Y+ + EG D SP + ARV + YDQY+AE+DPA GLF Y+G+ +++ F FLF S P+
Sbjct: 96 IPWTESVGGKEHKLLYMPFVEWQYKYMKENFETLEDKPFAEPLSFQRTPEKKPPAVIESWQFKTEHFRKIRMTYIDAGVRAQVYNCVIYPEYKYDLPILGIDFLSFGKSRVLAILDLQPLTQDPDYLERYIQPLRPIRSKYEDLCGRMSSKFYDEARFFSKELLFGKFDDPSPVMESLFPAFKEYFEHYVG--MVGGLEG-DESPEAIARVKQLQKDYDQYSAEKDPAVGLFATYWGQEWADRFTHEFLFSESVPVPK 350
BLAST of mRNA_F-serratus_M_contig688.17941.1 vs. uniprot
Match: A0A7S2RIT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIT5_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.530e-57 Identity = 116/257 (45.14%), Postives = 160/257 (62.26%), Query Frame = 3
Query: 540 PWTGSVAGSEFPLSYMSFLEHMLNVLASSFGDMRAMPLADRLAFVENPDKKARMLSMSFTSPEVRKLRLTYFDAGDKVQVLNAVIYPDTSLDMPLLGIDLISFGGKH-LAGIDFQPLFDDETCR--SRYAEKLAPIKAKYPEFSQKMSAKFYDSARFFSEEMLFGRYEDASIIDERLFPAFEEYLSTYIAELLAAAAEGGDPSPASRARVLDRHRAYDQYNAERDPAHGLFRNYYGEAFSEEFMDNFLFELSTRPPE 1301
PWT ++A L YM F H +L G +PL D L+ N K+AR+ S + + RK+R+TYFDAG+KVQV N++ YP D P+LG+DL+ FG K LA ID QPL D E + +++ +K ++P KMS +FYD +FFS+ MLFGR+ED S I + PAF+EYL Y+ +L+ D + + ARVL + AYDQY+AERDPAH LF +Y+GE +++E+M +FLFELST PPE
Sbjct: 61 PWTSTIASDGAALHYMDFYRHQEEILVGKLG-ATPLPLKDSLSGAVNHGKEARIASACYETDVFRKVRMTYFDAGNKVQVFNSLWYPRLEYDAPVLGVDLLCFGKKKILAVIDCQPLVDRENSEYHAEFSQPFLRVKEQFPSLCGKMSNRFYDENQFFSDGMLFGRFEDTSPIASEVLPAFQEYLQVYV-DLVKDVPR--DTTDKATARVLAQQAAYDQYSAERDPAHALFVSYFGEEWADEYMSDFLFELST-PPE 312
BLAST of mRNA_F-serratus_M_contig688.17941.1 vs. uniprot
Match: A0A7S1Z3N6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3N6_TRICV) HSP 1 Score: 212 bits (539), Expect = 2.950e-57 Identity = 119/284 (41.90%), Postives = 177/284 (62.32%), Query Frame = 3
Query: 537 LPWTGSVAGSEF--PLSYMSFLEHMLNVLASSFGDMRAMPLADR---LAFVENPDKKARMLSMSFTSPEVRKLRLTYFDAGDKVQVLNAVIYPDTSLDMPLLGIDLISFGGK-HLAGIDFQPLFDDETCRS-RYAEKLAPIKAKYPEFSQKMSAKFYDSARFFSEEMLFGRYEDASIIDERLFPAFEEYLSTYIAELLAAAAEGGDPSPASRARVLDRHRAYDQYNAERDPAHGLFRNYYGEAFSEEFMDNFLFELSTRPPEGYSKPSASGQCRGGQQSSGVKA 1367
+PW ++ SEF PL YM F E ++ + S ++R + D + EN KKAR+++ + S E RK+R++Y+DAGD QV N+V YPD S ++P+LGIDL++FG K +LA +DFQPL+++E + ++ L PIK +Y +MSAKFYD +FFS++MLF R+ED +++ + L PAF+ Y+ ++ +LL + D S S+ VL+R RAYD Y+AERDPA GLF +G+ ++E+F+ +FLF LS R G P G GG G A
Sbjct: 98 MPWVETIGSSEFENPLLYMPFWEWQMDFMGSELSNLRPIEHCDDGSDFGYNENSKKKARIVNHCYASDEYRKIRMSYYDAGDSTQVFNSVWYPDPSYNLPVLGIDLLAFGRKKYLAIVDFQPLYENEEDHAAKFEHILEPIKEEYDSLKGRMSAKFYDETKFFSKQMLFARFEDDNVVSDDLMPAFQRYVQAHL-KLLKSVKP--DDSLQSQKAVLERQRAYDTYSAERDPAAGLFAAMFGKEWAEDFIFDFLFSLSERKEGGIQIPPM-GMMGGGPPPQGXGA 377
BLAST of mRNA_F-serratus_M_contig688.17941.1 vs. uniprot
Match: A0A7S4VTV3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VTV3_9STRA) HSP 1 Score: 211 bits (537), Expect = 3.550e-57 Identity = 116/273 (42.49%), Postives = 171/273 (62.64%), Query Frame = 3
Query: 537 LPWTGSVAGS--EFPLSYMSFLEHMLNVLASSFGDMRAMPLADR-----LAFVENPDKKARMLSMSFTSPEVRKLRLTYFDAGDKVQVLNAVIYPDTSLDMPLLGIDLISFGGK-HLAGIDFQPLFDDETCRSRYAEKLA-PIKAKYPEFSQKMSAKFYDSARFFSEEMLFGRYEDASIIDERLFPAFEEYLSTYIAELLAAAAEGGDPSPASRARVLDRHRAYDQYNAERDPAHGLFRNYYGEAFSEEFMDNFLFELSTRPPEGYSKPSASG 1328
+PW +V + E PL YM F E + + + ++R +P +F +N +KKAR+++ + S E RK+R++Y+DAGD QV N+V YPD ++P+LGIDL++F K +LA +DFQPL+DDE + E L PIK +Y +MSAKFYD +FFS++MLF R+ED ++ E LFPAF+ Y+ T++ L ++ E D P+S RV+ R + YD Y+AERDPA GLF +G+A+++EF+ +FLF LS R G P G
Sbjct: 77 MPWRDTVGSTDKENPLLYMPFWEWQMEFMKETLTNLRVVPAKSSTSNLDFSFNDNKEKKARIVNHCYASDEYRKIRMSYYDAGDNTQVFNSVWYPDPKYNLPVLGIDLLAFNRKKYLAIVDFQPLYDDEAEHATTFEHLLRPIKDEYDSLKGRMSAKFYDETKFFSQQMLFARFEDEGVVIEDLFPAFQRYVKTHVD--LVSSTEA-DTQPSSVERVMTRQQEYDTYSAERDPATGLFAAMFGKAWADEFVYDFLFSLSERAEGGLKIPPMMG 346
BLAST of mRNA_F-serratus_M_contig688.17941.1 vs. uniprot
Match: A0A7S3ENW0_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENW0_9RHOD) HSP 1 Score: 208 bits (530), Expect = 4.100e-57 Identity = 110/254 (43.31%), Postives = 158/254 (62.20%), Query Frame = 3
Query: 537 LPWTGSVAGSEFPLSYMSFLEHMLNVLASSFGDMRAMPLADRLAFVENPDKKARMLSMSFTSPEVRKLRLTYFDAGDKVQVLNAVIYPDTSLDMPLLGIDLISFGGKH-LAGIDFQPLFDDETCRSRYAEKLAPIKAKYPEFSQKMSAKFYDSARFFSEEMLFGRYEDASIIDERLFPAFEEYLSTYIAELLAAAAEGGDPSPASRARVLDRHRAYDQYNAERDPAHGLFRNYYGEAFSEEFMDNFLFELSTRP 1295
LPW S+AG + + +M F+E V+ + +++ +P L+F + KKA++ S +F S RK+RLTY DAG QV N+V YPD D+PLLG+D +SFG K L +DFQPL ++ +Y E L PIK+KYP + +M+A+FYD +FFS+++ FGR+++ + E LFPAFEEYL+TY+ A A P A L+ + YD Y+AERDPA GLF Y+G ++ +F +FLFELS P
Sbjct: 46 LPWEKSIAGDDVEMLFMPFIELQNRVMFDTQKNLKDLPFESELSFQSSSRKKAKIESWNFQSDTFRKIRLTYIDAGIPAQVFNSVWYPDPKYDLPLLGVDFLSFGKKKILCVLDFQPLKQEKAYLEKYCEILDPIKSKYPSLAGQMTARFYDENQFFSKQLAFGRFDNPQPVMEELFPAFEEYLNTYVKMFKDAPAT---EDPKEIAANLELQKEYDIYSAERDPAVGLFSTYFGGEWAVKFTHDFLFELSETP 296 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig688.17941.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig688.17941.1 >prot_F-serratus_M_contig688.17941.1 ID=prot_F-serratus_M_contig688.17941.1|Name=mRNA_F-serratus_M_contig688.17941.1|organism=Fucus serratus male|type=polypeptide|length=410bp MTGHHMTTYCSRNTDKKSIGKCVKMKMLCTTAVIAACATASLPGGQSFFTback to top mRNA from alignment at F-serratus_M_contig688:338571..345677+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig688.17941.1 ID=mRNA_F-serratus_M_contig688.17941.1|Name=mRNA_F-serratus_M_contig688.17941.1|organism=Fucus serratus male|type=mRNA|length=7107bp|location=Sequence derived from alignment at F-serratus_M_contig688:338571..345677+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig688:338571..345677+ >mRNA_F-serratus_M_contig688.17941.1 ID=mRNA_F-serratus_M_contig688.17941.1|Name=mRNA_F-serratus_M_contig688.17941.1|organism=Fucus serratus male|type=CDS|length=2460bp|location=Sequence derived from alignment at F-serratus_M_contig688:338571..345677+ (Fucus serratus male)back to top |