mRNA_F-serratus_M_contig687.17931.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 456 bits (1174), Expect = 1.770e-141 Identity = 221/407 (54.30%), Postives = 297/407 (72.97%), Query Frame = 3
Query: 465 DLYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENCRMEAIAVR--STSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
DL+ +C+GC C+GC+F + PTCT L +EH+TS G T+E L I GYWRAT T++ C++ AC GG+TG YC GYEGPYC++CS+ Y+ +S+TCR CS++A GIA+A L ++ + + ++SY+ S E G GRGIV+R+ R +P+ SVKIV++ WQI+TQF +VANVT+P++Y FL+ L++FNFDLSW++S GC +DVDFHDRL+ TI P+ A + L TYA A+ RG+T+ T EN+RHKHV M LL+TF VYSSVS+ +F+ FACE L+DGK YLLAD++I+CDS+KH+ ++YAGFMVLLY GIP Y++LLF +R +L+ + + R STSDLWKPYKP FYYEVVEC RR+LL GVVVFIYPNS++QIA TL
Sbjct: 1109 DLFEAVCNGCQTACVGCAFADPLLV-PTCTDL----LEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATE-TLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITL 1509
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 442 bits (1138), Expect = 9.930e-139 Identity = 217/404 (53.71%), Postives = 286/404 (70.79%), Query Frame = 3
Query: 471 YGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENCRMEAIA-VRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
Y C GC C GC F PTCT + +EH TS GGT T+E+L + +GYWRA+ S ++ C+N+ AC GG+TG YC +GYEGPYC+VCS Y L++ C CS A IA+A VL ++ V + SY +S + G+V RL + +P+ SVKIVI+ WQILTQF SVANVT+P++Y +FLD LD+FNFDLSWV+S GC D+DFHDRL+ +T++PV+ L+FL GTYA A+ RG + + + I +KHVS+ LL+TFL+YSSVS+ +F+ F CE L+DG YL AD+ IDCDS+KH+A Q+YAGFMV++Y VGIP YA+LLF +R +L++ + E A STSDLWKPYKP FYYEV+ECGRR+LL GVVVFI+PN+A+QIA TL
Sbjct: 757 YEAACGGCETACDGCFFEPPVP--PTCTDV----MEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAE-SLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITL 1153
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 428 bits (1101), Expect = 2.540e-135 Identity = 211/405 (52.10%), Postives = 276/405 (68.15%), Query Frame = 3
Query: 468 LYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENCRMEAIA-VRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
LY IC GCP +C GCSF + P C+ +EH+ S GGT T++ L I GYWRAT S ++ +C+N AC GG+TG YC GYEGPYC+VCS Y L C +CS+ A IA+ +++ + ++SY +S E G RG+V+R R VP+ SVKIVI+ WQILTQF SVAN+ FP++Y +FLD L++FNFDL WV+S GC DVDFHDRL+ +TI P+V L+FL YA A S++ + + HKHVS+ LL+TFLVY+SVS+V+FQ FACE LDD K YL AD++I+CDS KH A Q+YAGFM++LY VGIP Y LF + +L+ + E +A + T+DLWKPY+P FYYEV+EC RR+LL GVVVFIYPN+A+QIA L
Sbjct: 476 LYEAICDGCPVECEGCSF-EEPQLVPKCSDA----LEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDL-QRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVAL 874
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 435 bits (1118), Expect = 4.380e-133 Identity = 216/411 (52.55%), Postives = 292/411 (71.05%), Query Frame = 3
Query: 465 DLYGTICSGCP----DKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENC--RMEAIAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
D Y T+C GCP D + G+ P C ++H S GG TIE L + GYWRATN+S ++ C+N AC GG+T DP +C RGYEGPYCSVCS+ Y+ SL++TC EC + GIAI V+ + I + +L+S EM GA RG++ R+ +R+P+ S+KIV++VWQILTQF+SVANVT+P++Y +FLD ++I NFD+ W+ S GC ++VDFH RL+ TI P+VAL L TY VA + GS + + IRHKH+SM LL+TFLVYSSVS+ VFQ FACE LDD K+YL AD++I+CDS++H+A Q++AG M+L+YPVGIP+ Y +LL+ +RR+L++E+ R + V+ SDLW PYKP RFYYEV+EC RR+ LTGVVVFIYPN+A+Q+A TL
Sbjct: 1271 DRYQTVCDGCPVNNSDWIVSVENGDRV---PICVVQ----LDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGS-EAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTL 1673
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI) HSP 1 Score: 421 bits (1083), Expect = 3.600e-130 Identity = 203/410 (49.51%), Postives = 280/410 (68.29%), Query Frame = 3
Query: 456 QREDLYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENCRMEA--IAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
+ +DL+ T+C GC +F P C L +EH+TS G T+E L I +GYWRAT S ++ C++ +AC GG+TG YC GY+GPYC+VCS ++ +TCRECS+SA GI +A L + +V++SY+ S + G G+GIV+R+ +P+ SVKIV++ WQ++TQF VAN+T+P++Y FLD L +FNFDL W++S GC DVDFHDRL+ +TI P++A++ L TYA A RG+T T +N+ KHV + LL++F VYSSVSS +F+ FACE L DGK YL AD++I+CDS++H+ ++YAG M+L+Y VGIP Y +LL+ +R L+ + E V STSDLWKPY+P FYYEV+ECGRR+LL GVVVFIYPNS +QIA TL
Sbjct: 915 ESDDLFETVCDGCQTXXXXXAFAEPLLV-PMCRDL----LEHSTSPDGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLKERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITL 1319
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 417 bits (1071), Expect = 5.120e-128 Identity = 209/404 (51.73%), Postives = 279/404 (69.06%), Query Frame = 3
Query: 471 YGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENC-RMEAIAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
+ +C GC C GCSF + PTC+ + ++H TS GG T+E L I GYWRAT+ S +I C+N AC GG+TG YC YEGPYCS+CS YA +L Y+C +C + + GI A + +LA V +V+I Y++S E +++RL VP+ SVKIVI+ WQILTQFAS ANV +P +Y +FLD L +F FDL W+MS GC LD+ FH RL+ TI P+ A++ L GTYA A R + + I KHV + LL+TFLVYSSVSS +F+ FAC+ L+DGK YL D++I+CDS+KH+ Q+YAGFM+LLYP+GIPM Y+ LLF +R +L+ + R ++ V+STS+LW+PYKP FYYEV+ECGRRILLTG+VVFIYPN+A+Q+A TL
Sbjct: 927 FEAVCDGCRVACDGCSF-DEPPAVPTCSDV----MDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRI-IWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITL 1324
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 416 bits (1070), Expect = 2.150e-127 Identity = 212/408 (51.96%), Postives = 290/408 (71.08%), Query Frame = 3
Query: 465 DLYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECS-NSAVGIAIATVLTLLATTVGIVIISYLLSAEM-MGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENC-RMEAIAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
D + IC+GC C GC F + P CT + ++H+TS GG T++ L I +G+WRA+ ST++ C++ AC GG+TG YC GYEGPYC +CS Y LS+ C +CS NSA GIA+A VL LL + + ++SY+ S E+ MG GIV+ +TR +P+ S+KIVI+ WQILTQF SVANVT+P++Y LD LD+FNFDLSW++S GC +D++FH RL+ +TI+P+VAL+ L TYA A RG + + I +KHV++ LL+TF VYSSVSS +F+ FAC+ LD K YL AD+ I+C+S++HR +Q+YAGFM+++Y VGIP YA LLF +R +L++E+ R E V+S S+LW+PYKP FYYEV+EC RR+LL GVVVFIYPN+A+QIA TL
Sbjct: 1008 DHFEAICNGCETTCDGCVFAEGSLA-PICTEV----MDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNI-IWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTL 1409
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 403 bits (1035), Expect = 1.270e-125 Identity = 200/406 (49.26%), Postives = 273/406 (67.24%), Query Frame = 3
Query: 465 DLYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNE-NCRMEAIAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
D CSGC C GC P L I H+ S GG T+E L I GYWRATN ST++ C+N AC GG+TG +YC GYEGPYC++CS +Y+ L +TC +C N A GI +AT L ++ + ++SY+ G + L R +P+ ++KI+++ WQI+TQF S ANVT+P++Y +FL+ LD+FNFD+SWV+S GC +D+DFHDRL+ +TI P++AL+FL TY RG+ T + + +HVSM LL+ FLVYS VSSVVFQ FAC+ L+ G YL AD++I+CDS+KH+ ++YAGFM+LLYPVGIP Y LL +R +L+ + + R + V S S+LW+PY+P +YYEV+ECGRRILLTG+VVFIYPN+A+QIA TL
Sbjct: 517 DALDEACSGCQTTCDGCVQ-------PPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNA-ATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITL 914
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 409 bits (1051), Expect = 8.050e-125 Identity = 205/407 (50.37%), Postives = 281/407 (69.04%), Query Frame = 3
Query: 462 EDLYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCRECSNSAVGIAIATVLTLLATTVGIVIISYLLSAEMMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTYAVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLLQNENC-RMEAIAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
+ + +C GC C GCSF + PTC+ + ++H+TS GG T+E L I GYWRAT+ S I C+N AC GG+TG YC YEGPYCS+CS YA +L Y+C +C + + GIA A L ++A V +V+I Y++S E + +RL VP+ SVKIVI+ WQI+TQFAS ANV +P +Y +F+D L +F FDL W++SVGC LD+DFH RL+ TI P+ A++ L GTYA A R + + I KHV + LL+TFLVYSSVSS +F+ FAC+ L+DG YL D++I+CDS+KH+ Q+YAGFM+LLYP+GIP+ Y+ LLF +R +L+ + R ++ V+STS+LW+PYKP FYYEV+ECGRR+LLTG++VFIYPN+A+Q+A TL
Sbjct: 984 DGTFEAVCDGCRVACDGCSF-DEQPAVPTCSDV----MDHSTSPGGNVTLETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAGYCLESYEGPYCSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRI-IWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGN-YLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITL 1383
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 408 bits (1049), Expect = 6.310e-124 Identity = 216/413 (52.30%), Postives = 279/413 (67.55%), Query Frame = 3
Query: 456 QREDLYGTICSGCPDKCLGCSFGNNARGGPTCTSLPLSGIEHATSVGGTATIEELYIHKGYWRATNESTDINKCFNTKACYGGLTGDPDYCHRGYEGPYCSVCSKNYAPSLSYTCREC-SNSAVGIAIATVLTLLATTVGIVIISYLLSAEM-MGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLDRLDIFNFDLSWVMSVGCFLDVDFHDRLMWTTITPVVALVFLGGTY--AVALYKFRGSTQVTHENIRHKHVSMTLLVTFLVYSSVSSVVFQMFACEHLDDGKRYLLADFKIDCDSAKHRALQIYAGFMVLLYPVGIPMCYAWLLFSNRRLL-QNENCRMEAIAVRSTSDLWKPYKPQRFYYEVVECGRRILLTGVVVFIYPNSASQIAFTL 1679
Q +D + +CSGC C GC F P CT + +EHATS GG T+E L I GYWRAT S D+ C++ +AC GG+T YC GYEGPYCSVCS Y+ L + C +C + GI I VL + T V I SY+ S E MG G G ++R+TR +P+ SVKIVI WQILTQF S+ANVT+P++Y FL LD+FNFDL W +SV C +D+DFHDRL+ +TI+P+ AL+FL TY A +LY+ + T ++HKH SM LL+TF VYSSVSS++F+ FACE L D K YL +D++I+CDS+KH+ Q+YA FM+L+Y VGIP YA LLF +R LL Q+ + R + V S +DLW+PY FYYEV+ECGRR+LL GVVVFIYPN+A+QIA TL
Sbjct: 1116 QSDDPFEVMCSGCEVTCEGCVFDEGLLV-PACTEV----MEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGA---VQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTL 1520 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig687.17931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig687.17931.1 >prot_F-serratus_M_contig687.17931.1 ID=prot_F-serratus_M_contig687.17931.1|Name=mRNA_F-serratus_M_contig687.17931.1|organism=Fucus serratus male|type=polypeptide|length=258bp MMGAGRGIVDRLTRRVPMHSVKIVIIVWQILTQFASVANVTFPNMYHKFLback to top mRNA from alignment at F-serratus_M_contig687:205856..208821- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig687.17931.1 ID=mRNA_F-serratus_M_contig687.17931.1|Name=mRNA_F-serratus_M_contig687.17931.1|organism=Fucus serratus male|type=mRNA|length=2966bp|location=Sequence derived from alignment at F-serratus_M_contig687:205856..208821- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig687:205856..208821- >mRNA_F-serratus_M_contig687.17931.1 ID=mRNA_F-serratus_M_contig687.17931.1|Name=mRNA_F-serratus_M_contig687.17931.1|organism=Fucus serratus male|type=CDS|length=1548bp|location=Sequence derived from alignment at F-serratus_M_contig687:205856..208821- (Fucus serratus male)back to top |