mRNA_F-serratus_M_contig687.17930.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig687.17930.1
Unique NamemRNA_F-serratus_M_contig687.17930.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig687.17930.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 2.800e-85
Identity = 142/254 (55.91%), Postives = 181/254 (71.26%), Query Frame = 3 
Query:  183 MARFALVTLTCLATVVGAASALEVTMPSEGSVYVAGSVRTVEWEGTG-ESRFDIDLFFCGSFCLADDCGEWVTSLCPFGEAGCPDSAGDYDVVMPEPMTGTSNINDGYKIRVADINDEDSMDCSEPFTLLPSSAETPTTTTVGLVDGSALVVTSPMDGDMAEACMEYTVEWDYDDDGFGSAEGRFNIDLFEADGLEDCGTFYAALCDQESIGCKAPQGVFDIAIPCDANTGEYKIRVGVFDDDSTFGCSDTFTL 941
            M R   V L C   ++GAA+AL+V+ PS+G   +A    TVEW GT  ++RF+IDL++CGS C+ DDCG+WVT+LCP+GE GCPD+ GDYD+VMPEPM GTS    GYK+RV DI+DE+  DCS+ F LL SS E P+   VG  DG  L VTSP  GD+A  C EYTVE+DYD+ G GS+  RF IDL+ ADG  DCGT+  ++CD+ +IGCK   G +D+ IPCD + GEYKIRV  F+DDS + CS TFT+
Sbjct:    1 MTRTGFVALAC--GMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGS--GYKVRVWDIHDEEDADCSDEFYLLASS-EAPS---VGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDN-GVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTI 245
[Close]
BLAST of mRNA_F-serratus_M_contig687.17930.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 1.500e-84
Identity = 145/277 (52.35%), Postives = 184/277 (66.43%), Query Frame = 3 
Query:  183 MARFALVTLTCLATVVGAASALEVTMPSEGSVYVAGSVRTVEWEGTGESRFDIDLFFCGSFCLADDCGEWVTSLCPFGEAGCPDSAGDYDVVMPEPMTGTSNINDGYKIRVADINDEDSMDCSEPFTLLPSSAETPTTTTVGLVDGSALVVTSPMDGDMAEACMEYTVEWDYDDDGFGSAEGRFNIDLFEADGLEDCGTFYAALCDQESIGCKAPQGVFDIAIPCDANTGEYKIRVGVFDDDSTFGCSDTFTLVGSTTTTSATFGGEGVELSMSFSF 1013
            MAR   V L C   ++GAA+ALEV  PS   + VA    TVEW G    RF+IDL+ CGS C+ D CG+WVT+LCP+GE GCPD+ GDYD+VMPEPM+G SN   GYK+RV D++DEDSMDCS+ F L+ +S + P     G   G  L VTSP +GD AEA  EYTVE+DYD+ G GS   RF+IDL+ ADG  DCGT+  ++CD+ SIGCK   G +D+ IP D   G+YKIRVG F+D+  +GCS TFT++G            G + SMS+ F
Sbjct:    1 MARTGFVALAC--AMLGAANALEVVTPSADLIVVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNS--GYKVRVMDVSDEDSMDCSDAFYLM-ASEDAPD---AGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDN-GVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIMG------------GDDESMSYDF 256
[Close]
BLAST of mRNA_F-serratus_M_contig687.17930.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 7.820e-84
Identity = 138/240 (57.50%), Postives = 174/240 (72.50%), Query Frame = 3 
Query:  231 GAASALEVTMPSEGSVYVAGSVRTVEWEGTGES-RFDIDLFFCGSFCLADDCGEWVTSLCPFGEAGCPDSAGDYDVVMPEPMTGTSNINDGYKIRVADINDEDSMDCSEPFTLLPSSAETPTTTTVGLVDGSALVVTSPMDGDMAEACMEYTVEWDYDDDGFGSAEGRFNIDLFEADGLEDCGTFYAALCDQESIGCKAPQGVFDIAIPCDANTGEYKIRVGVFDDDSTFGCSDTFTLVG 947
            GAASALEV  P+EG + VA    TVEW GTG + R++IDL++CGS C+ D+CG+WVT+LCP+GE GCPD+ GDYD+VMPEPM+GTS    GYK+RVAD++D+DS DCS+ F L+ + AE P+    G   G  + VTSP  GD AEA  EYTVE+DYD+ G GS+ GRF IDL+ A G  DCGTF   LCD+ +IGCK   G +D+ IP DA  G Y IRVG F+DDS +GCSD F ++G
Sbjct:    3 GAASALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGS--GYKVRVADVDDDDSGDCSDEFYLM-AHAEAPS---AGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDN-GLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEILG 235
[Close]
BLAST of mRNA_F-serratus_M_contig687.17930.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE)

HSP 1 Score: 271 bits (692), Expect = 1.340e-82
Identity = 140/256 (54.69%), Postives = 179/256 (69.92%), Query Frame = 3 
Query:  183 MARFALVTLTCLATVVGAASALEVTMPSEGSVYVAGSVRTVEWEGTGES-RFDIDLFFCGSFCLADDCGEWVTSLCPFGEAGCPDSAGDYDVVMPEPMTGTSNINDGYKIRVADINDEDSMDCSEPFTLLPSSAETPTTTTVGLVDGSALVVTSPMDGDMAEACMEYTVEWDYDDDGFGSAEGRFNIDLFEADGLEDCGTFYAALCDQESIGCKAPQGVFDIAIPCDANTGEYKIRVGVFDDDSTFGCSDTFTLVG 947
            M R   V L C   ++G ASALEV  P+ G + V+    TVEW GTG + RF+IDL++C S C+ D+CGEWVT+LCP+GE GCPD+ GDYD+VMPEPM+GTS    GYK+RVAD++DEDS DCS+ F L+ + A+ P+ +  G   G  + VTSP  GD AEA  EYTVE+DYD+ G GS+ GRF IDL+ A G  DCGTF   LCD+ +IGCK   G +D+ IP DA  G Y IRVG F+D+S +GCSD F ++G
Sbjct:    2 MVRTGFVALAC--GMLGVASALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGS--GYKVRVADVDDEDSSDCSDEFYLM-AHADAPSASDAG---GPYVTVTSPSTGDSAEAGEEYTVEFDYDN-GLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEILG 248
[Close]
BLAST of mRNA_F-serratus_M_contig687.17930.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 1.060e-78
Identity = 130/239 (54.39%), Postives = 166/239 (69.46%), Query Frame = 3 
Query:  231 GAASALEVTMPSEGSVYVAGSVRTVEWEGTGESRFDIDLFFCGSFCLADDCGEWVTSLCPFGEAGCPDSAGDYDVVMPEPMTGTSNINDGYKIRVADINDEDSMDCSEPFTLLPSSAETPTTTTVGLVDGSALVVTSPMDGDMAEACMEYTVEWDYDDDGFGSAEGRFNIDLFEADGLEDCGTFYAALCDQESIGCKAPQGVFDIAIPCDANTGEYKIRVGVFDDDSTFGCSDTFTLVG 947
            GAA+ALEV  P+ G + VA S  TVEW G    R+DIDL++CGS C+ D+CG+WVT+LCP+G+ GCPD+ GDYDVVMPEPM GTS+   GYK+ V D +DE    CS  FTL+ +S E P  T +G    + + VTSP DGD A A  EYTVE+DYD+ G GS+  RF IDL+ + G  DCGT+   +CD+ SIGCK  QG +D+ IP    +G Y IRVGVF+DD  +GCSD+F +VG
Sbjct:   15 GAANALEVVSPAAGDMVVADSAYTVEWTGATSGRYDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSS---GYKVMVTDSSDESDYGCSGDFTLI-ASTEAPDATDMG----AYVSVTSPSDGDTAMAGGEYTVEFDYDN-GLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIVG 244
[Close]
BLAST of mRNA_F-serratus_M_contig687.17930.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 1.310e-76
Identity = 131/239 (54.81%), Postives = 162/239 (67.78%), Query Frame = 3 
Query:  231 GAASALEVTMPSEGSVYVAGSVRTVEWEGTGESRFDIDLFFCGSFCLADDCGEWVTSLCPFGEAGCPDSAGDYDVVMPEPMTGTSNINDGYKIRVADINDEDSMDCSEPFTLLPSSAETPTTTTVGLVDGSALVVTSPMDGDMAEACMEYTVEWDYDDDGFGSAEGRFNIDLFE-ADGLEDCGTFYAALCDQESIGCKAPQGVFDIAIPCDANTGEYKIRVGVFDDDSTFGCSDTFTLV 944
            GAA+ALEV  P+ G   +A    TVEW GT +SRF+IDL++CGSFC+ D+CG+WVT+LCP+G  GCPD+ GDYD+VMPEPM GTS+   GYK+ V D NDE SM CS  FTL+ +S + P    VG     +L VTSP DGD A A   YTVEWDY++ G GS+  RF IDL+    G  DCGT+ A LCD+ SIGC   QG +D+ IP D   G Y +RVGVF DD  F CS+ F +V
Sbjct:   15 GAANALEVVSPAAGISVIADRTYTVEWTGTSDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSS---GYKVVVTDSNDESSMGCSGDFTLV-ASTDAPAAGEVGY----SLTVTSPSDGDTAMAGGVYTVEWDYEN-GLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIV 244
[Close]
BLAST of mRNA_F-serratus_M_contig687.17930.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 2.100e-74
Identity = 126/234 (53.85%), Postives = 157/234 (67.09%), Query Frame = 3 
Query:  234 AASALEVTMPSEGSVYVAGSVRTVEWEGTGESRFDIDLFFCGSFCLADDCGEWVTSLCPFGEAGCPDSAGDYDVVMPEPMTGTSNINDGYKIRVADINDEDSMDCSEPFTLLPSSAETPTTTTVGLVDGSALVVTSPMDGDMAEACMEYTVEWDYDDDGFGSAEGRFNIDLFEADGLEDCGTFYAALCDQESIGCKAPQGVFDIAIPCDANTGEYKIRVGVFDDDSTFGCSDTF 935
            AA+ALEV  P  G   +A    TVEW GT   RF+IDL++C SFC+ D CG+WVT+LCP+G  GCPDSAGDYD++MPEPM+GTS+   GYK+ V +  DE  M CS+ FTL+ +S + P    +G     +L VTSP DGD A A   YTVEWDY++ GFGS+  RF +DL+   G  DCGT+   LCDQ SIGC   QG +D+ IP D   G Y IRVGVFDD+  + CSDTF
Sbjct:   16 AANALEVVSPDGGISVLADRAYTVEWTGTTTGRFEIDLYYCNSFCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSS---GYKVMVKNAEDESDMGCSDDFTLI-ASEDAPEAGEMGY----SLTVTSPSDGDTAMAGEVYTVEWDYEN-GFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTF 240
[Close]
BLAST of mRNA_F-serratus_M_contig687.17930.1 vs. uniprot
Match: D7FH21_ECTSI (Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 8.080e-68
Identity = 120/214 (56.07%), Postives = 154/214 (71.96%), Query Frame = 3 
Query:  183 MARFALVTLTCLATVVGAASALEVTMPSEGSVYVAGSVRTVEWEGTG-ESRFDIDLFFCGSFCLADDCGEWVTSLCPFGEAGCPDSAGDYDVVMPEPMTGTSNINDGYKIRVADINDEDSMDCSEPFTLLPSSAETPTTTTVGLVDGSALVVTSPMDGDMAEACMEYTVEWDYDDDGFGSAEGRFNIDLFEADGLEDCGTFYAALCDQESIGCK 821
            MAR   V L C   ++GAA+AL+V+ PS+G   +A    TVEW GT  ++RF+IDL++CGS C+ DDCG+WVT+LCP+GE GCPD+ GDYD+VMPEPM+GTS    GYK+RV DI+DE+  DCS+ F L+ SS E P+   VG  DG  L VTSP  GD+A  C EYTVE+DYD+ G GS   RF IDL+ ADG  DCGT+  ++CD+ +IGCK
Sbjct:    2 MARTGFVALAC--GMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGS--GYKVRVWDIHDEEDADCSDEFYLIASS-EAPS---VGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDN-GVGSRVDRFAIDLYRADGDGDCGTYVQSICDKPTIGCK 206
[Close]
BLAST of mRNA_F-serratus_M_contig687.17930.1 vs. uniprot
Match: A0A6H5KP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 1.110e-67
Identity = 117/248 (47.18%), Postives = 154/248 (62.10%), Query Frame = 3 
Query:  231 GAASALEVTMPSEGSVYVAGSVRTVEWEGTGESRFDIDLFFCGSFCLADDCGEWVTSLCPFGEAGCPDSAGDYDVVMPEPMTGTSNINDGYKIRVADINDEDSMDCSEPFTLLPSSAETPTTTTVGLVDGSALVVTSPMDGDMAEACMEYTVEWDYDDDGFGSAEGRFNIDLFEADGLEDCGTFYAALCDQESIGCKAPQGVFDIAIPCDANTGEYKIRVGVFDDDSTFGCSDTFTLVGSTTTTSATF 974
            GA +ALEVT P+ G + VA S  TVEW GT   RFDIDL++CGS C+ D+CG+WVT+LCP+G+ GCPD+ GDYDVVMPEPM GTS+   GYK+ V D +DE  M CS  FTL+ S+                                     +D+D+ GFGS+  RF+IDL+ + G  DCGT+  ++CD+ SIGCK  QG +D+ IP D  +G Y IRVGVF+D   FGCSD+F ++G  ++ S  F
Sbjct:   15 GAVNALEVTSPAAGDMIVAASSTTVEWTGTSSGRFDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSS---GYKVMVTDSSDESDMGCSGEFTLVASAXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDHDN-GFGSSVNRFSIDLYMSGGSGDCGTYVTSICDKSSIGCKDSQGDYDVVIPSDTESGMYSIRVGVFEDPDVFGCSDSFEIIGGESSMSVRF 253
[Close]
BLAST of mRNA_F-serratus_M_contig687.17930.1 vs. uniprot
Match: A0A6H5KR87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR87_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 5.120e-56
Identity = 104/197 (52.79%), Postives = 131/197 (66.50%), Query Frame = 3 
Query:  369 LADDCGEWVTSLCPFGEAGCPDSAGDYDVVMPEPMTGTSNINDGYKIRVADINDEDSMDCSEPFTLLPSSAETPTTTTVGLVDGSALVVTSPMDGDMAEACMEYTVEWDYDDDGFGSAEGRFNIDLFE-ADGLEDCGTFYAALCDQESIGCKAPQGVFDIAIPCDANTGEYKIRVGVFDDDSTFGCSDTFTLVGSTT 956
            + DDCG+WVT+LCP+G  GCPD+ GDYD+VMPEPM GTS+   GYKI V D NDE SM CS  FTL+ +S + P    VG     +L V SP DGD+A A   YTVEWDY++ G GS++ RF IDL+    G  DCGT+ A LCD+ +IGC   QG +D+ IP D   G Y +RVGVF D+  F CS+ F +V  +T
Sbjct:    1 MEDDCGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSS---GYKIMVTDSNDESSMGCSGDFTLV-ASTDAPAAGEVGY----SLTVNSPSDGDIAMAGEVYTVEWDYNN-GLGSSKDRFAIDLYTYGTGTGDCGTYVATLCDKPTIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDEIMFDCSEAFEIVNDST 188
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig687.17930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JRG9_9PHAE2.800e-8555.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYL2_ECTSI1.500e-8452.35EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
D8LI46_ECTSI7.820e-8457.50EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JFT9_9PHAE1.340e-8254.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3E8_ECTSI1.060e-7854.39Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus T... [more]
D7G3F0_ECTSI1.310e-7654.81EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JY62_9PHAE2.100e-7453.85GPI-anchored domain-containing protein n=2 Tax=Ect... [more]
D7FH21_ECTSI8.080e-6856.07Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KP11_9PHAE1.110e-6747.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR87_9PHAE5.120e-5652.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig687contigF-serratus_M_contig687:122226..128401 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons5
Model size2053
Cds size840
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932099.0015473-UTR-F-serratus_M_contig687:122225..1232561622932099.0015473-UTR-F-serratus_M_contig687:122225..123256Fucus serratus maleUTRF-serratus_M_contig687 122226..123256 -
1690964146.2926521-UTR-F-serratus_M_contig687:122225..1232561690964146.2926521-UTR-F-serratus_M_contig687:122225..123256Fucus serratus maleUTRF-serratus_M_contig687 122226..123256 -
1622932099.117951-UTR-F-serratus_M_contig687:128219..1284011622932099.117951-UTR-F-serratus_M_contig687:128219..128401Fucus serratus maleUTRF-serratus_M_contig687 128220..128401 -
1690964146.3694353-UTR-F-serratus_M_contig687:128219..1284011690964146.3694353-UTR-F-serratus_M_contig687:128219..128401Fucus serratus maleUTRF-serratus_M_contig687 128220..128401 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932099.0182116-CDS-F-serratus_M_contig687:123256..1234501622932099.0182116-CDS-F-serratus_M_contig687:123256..123450Fucus serratus maleCDSF-serratus_M_contig687 123257..123450 -
1690964146.3053133-CDS-F-serratus_M_contig687:123256..1234501690964146.3053133-CDS-F-serratus_M_contig687:123256..123450Fucus serratus maleCDSF-serratus_M_contig687 123257..123450 -
1622932099.0326397-CDS-F-serratus_M_contig687:123702..1238411622932099.0326397-CDS-F-serratus_M_contig687:123702..123841Fucus serratus maleCDSF-serratus_M_contig687 123703..123841 -
1690964146.3184981-CDS-F-serratus_M_contig687:123702..1238411690964146.3184981-CDS-F-serratus_M_contig687:123702..123841Fucus serratus maleCDSF-serratus_M_contig687 123703..123841 -
1622932099.0543935-CDS-F-serratus_M_contig687:126420..1267351622932099.0543935-CDS-F-serratus_M_contig687:126420..126735Fucus serratus maleCDSF-serratus_M_contig687 126421..126735 -
1690964146.3329356-CDS-F-serratus_M_contig687:126420..1267351690964146.3329356-CDS-F-serratus_M_contig687:126420..126735Fucus serratus maleCDSF-serratus_M_contig687 126421..126735 -
1622932099.0767093-CDS-F-serratus_M_contig687:127633..1277151622932099.0767093-CDS-F-serratus_M_contig687:127633..127715Fucus serratus maleCDSF-serratus_M_contig687 127634..127715 -
1690964146.3484352-CDS-F-serratus_M_contig687:127633..1277151690964146.3484352-CDS-F-serratus_M_contig687:127633..127715Fucus serratus maleCDSF-serratus_M_contig687 127634..127715 -
1622932099.096262-CDS-F-serratus_M_contig687:128109..1282191622932099.096262-CDS-F-serratus_M_contig687:128109..128219Fucus serratus maleCDSF-serratus_M_contig687 128110..128219 -
1690964146.3583949-CDS-F-serratus_M_contig687:128109..1282191690964146.3583949-CDS-F-serratus_M_contig687:128109..128219Fucus serratus maleCDSF-serratus_M_contig687 128110..128219 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig687.17930.1prot_F-serratus_M_contig687.17930.1Fucus serratus malepolypeptideF-serratus_M_contig687 123257..128219 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig687.17930.1

>prot_F-serratus_M_contig687.17930.1 ID=prot_F-serratus_M_contig687.17930.1|Name=mRNA_F-serratus_M_contig687.17930.1|organism=Fucus serratus male|type=polypeptide|length=280bp
MARFALVTLTCLATVVGAASALEVTMPSEGSVYVAGSVRTVEWEGTGESR
FDIDLFFCGSFCLADDCGEWVTSLCPFGEAGCPDSAGDYDVVMPEPMTGT
SNINDGYKIRVADINDEDSMDCSEPFTLLPSSAETPTTTTVGLVDGSALV
VTSPMDGDMAEACMEYTVEWDYDDDGFGSAEGRFNIDLFEADGLEDCGTF
YAALCDQESIGCKAPQGVFDIAIPCDANTGEYKIRVGVFDDDSTFGCSDT
FTLVGSTTTTSATFGGEGVELSMSFSFMF*
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mRNA from alignment at F-serratus_M_contig687:122226..128401-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig687.17930.1 ID=mRNA_F-serratus_M_contig687.17930.1|Name=mRNA_F-serratus_M_contig687.17930.1|organism=Fucus serratus male|type=mRNA|length=6176bp|location=Sequence derived from alignment at F-serratus_M_contig687:122226..128401- (Fucus serratus male)
TCCTCGGTACATACCTACCTACGGTCGAAGCGATCGAAGCGATCGAAGCG
ATCCAAGTGTGCGCAAGTGGGAAGAAGAGCTACCGTTTTCTAAAAAGTAG
TAGATCTTCGAAGCAGACATCATCTGACAGTTTTGTACCAAGTCTACTGT
TACTACTACTACTTCGGTGACTGTTGAATAAAATGGCTCGGTTTGCCTTG
GTCACGCTTACTTGCCTCGCCACCGTCGTCGGGGCCGCGAGCGCTCTGGA
GGTCACAATGCCCAGCGAAGGAAGCGTATACGTCGCGGGCAGGTGAGTCT
TTTTTTTTCCATGAGTGAAGTGAGCAACGCGCGGACTCAAGCCATATTAT
TTATTATATGTAAAGTGTGTCTTATTGCAAAGGTCAATTTCCTCCGTGCC
TCACTAGAAGACTAGTATTAATAGTTATCCTAAAAGTATAATAGTATTTT
TAGTCGCGCCTGGTATTCCTTCAAAAGGAGCTTTCATTTCGCCTGCTTCT
ATCCTCCTGTTGCATGCCGCACTGATTGAGTGGGCCGCGATACTTTATAC
CTGGTACACATTTCGACTATACTGTACTGATTTATTTATGAATAGTTGTC
GACAACCGAAACCGAAACAACTAACTGTGTTGTTACTGTTACCGTTATAC
TGTTGTTACTGTTCTGTTGCTACTCTACTGTTACAGCGTGCGCACAGTAG
AGTGGGAGGGTACCGGAGAGAGCCGATTCGACATTGACCTTTTCTTTTGC
GGCTCTTTCTGTCTGGCGGTGAGAGCGTTACTTTTTGTGGGTATGACCTT
CTTCACTTTTTGGAGAGAAACCTTCTTCGCCTTTCGCGCTCATGACCCAC
CTCGGAGTCTATAATGAGTGGTTCCCGATAGATAAGCTCATGACCAACCA
ACTGACTGTAACAGTTACATCTTCCTCCGACCCATTTTTCGCTATTTGCT
TTCTGACCACTGTTTGTCCACGTTGTTAGCGCAAACACGTCTGAACTGAT
ATTATCAATAATCACAGTGTAACGATTTTTATTGACGAAAAATTAACGAA
GCGTCGTGCTTTCGTTTATTTCTGCTCGTAGCTAGTGACTAACTGTTCTG
TAGCTTGTTATTTAAAGAAAAATGTGAATGCACGTAGCCTTTCTGATCCG
CCCCCTATTGTTCGTATGTGCTCGAATTACCCCGACGGCGAACAAGCTAC
TATTATTACTACTCTTGTAACTGTATTACGAGTACTGTATGTATTTTAAT
GTGAAAACAACAAAAACGTTTTAACAAATTGTTCCCCCTGACTGGGGGAT
GCTCAGAAGGTCTAGGTACGTTCTGACTTTTCTCTAAAATACACTAGTAC
TGTTTAAAAGTTTTCCTGCCGTCCCCTCCCAAAACGGGGACACGTTTGTG
ACATCCCCACCCCCCCTAGTCATTGATCGACTCATTACTTTACAAAAAAA
TGTAGCAGCTTTACTCTCTGTACTATACCAAGTACAAGGTAACTATACTG
GTAAACAGTACTACGAATACAATACATGCGTGTTTTTTTCAGAAACCGCC
CTCATCACTACTACACCGCAATTACTACCGTACAAAATAAAATTATTTGT
CGGTACGTCCGTCTGGTCGAGTTTTTTTTCTCGATTTAACCTTTTATGGC
ATCTTGTACCCTAAAGGACGACTGCGGTGAGTGGGTCACCAGCTTGTGCC
CCTTCGGCGAGGCTGGTTGCCCGGACTCAGCGGGCGACTACGATGTTGTT
ATGCCCGAGCCAATGACCGGTACATCGAACATTAACGACGGCTACAAGAT
CCGTGTGGCGGACATCAACGACGAGGACAGCATGGATTGTTCCGAACCAT
TCACCCTCCTCCCTTCTTCGGCGGAAACTCCGACTACTACTACTGTCGGC
CTGGTAGATGGATCCGCCCTTGTCGTCACCTCACCCATGGATGGTGACAT
GGCTGAAGCATGCATGGAGTACACTGTGGAGGTAAGGCTTACAGAAAATC
TGAACATATGATTTACGTTCTGAGCATCCAACGGGTCGGGGGGTGGGGGG
GGAATTGTTCAGACGTTTATTATGTGGGAACATAAATAGGCTTTTAAGGA
CAAAAAACGCTTGGGATATAATTGGTTTTCCCATTAACAATCGTATTAGT
ATAATATTAATAGCGAGAAACCCGCCGTTCTACTGTACACTATTAATAGC
ATAATAGTCTCCATACAGGTACACCAAAACAGAGGCATATATCCAGGCTA
TATGGCAAAAGTTCACGCTATAGACTATATATATTATGTTGAGTCCGCAA
ATACGAAAATGTTTTTTGGGATTTAATTGGGTTTTCCGTTGGCATTGCAT
CGGGGAGAAGTTTACCCATTATACTATACTTCACATATACATCACGGTAT
CCAAGCACCACACCAGAGGCACCACCAGTACACACTCGCTGAAAGAAGAT
ACAACAGCCTATGAAACAAAACAAAAATAAAAACACGTCGTGTAAAATAC
AAACAAACAACATGTAATCCGGTACTGAATGGATGACACGGAAAAGAGAC
CCTATAGGGGCTTGTTGTAAAACGTAAAATAATGAATAATGTACTTCTCT
TCAACCATTAGAACATTATAATGTTCCTTTTTGTGTTCTAGACTACCAGG
TATTAATACTACTATACTGTTGTTATACGGTTCGATGACACTACTATTAT
TTGATACTCCTGTTCAATCATATACTATTATATTACAGAATGTTTTTGAT
TTATTTTGTCTGGTCTCCCTGCATGGCGATTAATATAAAAGTACAGCATA
AGACCACTTCTTATGCTGTTAGAAAATGTTATCAGAAAACGCCATTTCTG
ATATGGGACCAAAAATCCCCGCTTCGGATTTTCTAACAGGATGCACTTAT
TAAAAATCTTATTAGAAATGGGTTTGAATTCCCAACGGCTAGGGTTTGAA
TTCTCCACGGCTGCTAAGTTGCAGCGGTGACAGTCGCGATGGCAGCATAT
CGACGCCGCAAGCAGAGAATAAAAAATACCAATCAGTTGGCACTTGTTCT
GGGGTTACTCGACGAGGAAGACGTAGTCGTGTCCCGAGAAAATATCTTTC
TGTAGCCTTTGCAGCGTGCGTTGTGCAGCTTTACCTCCTCTGTACAGATT
ATTATTGACTATGCTGTTTTAGATACTGTTTGATGCTGTAATTGGAGGTT
GCTTGCACAGCAGTCCTAGTTGCATGGAACATTGCGGCCTTCGAGCTGCA
TTCATGTGGCTGTGCAAGCCCAAACGATTGAAGACCACGTGCTGTACGAT
GCCACGGTTGTAAGTAGGTGCACAAGGTAATACGCCTACCCGCAGCAGCG
GTCCTTCGTTATGTGTTGTGGGCGAGCCCCGGAACGGACAGACGCAAAAA
TTCAAATTCTCCTTCAAAGACAGACCTCGTGTAGGTTGGAGACTCGCATG
GATTACTGTGTCGCAGCGGTGGGCCACGGTGGCAGCATATTGACGCCGCA
AGCAGAGGATAAAAAATGTCAATCAGTTGCCACTCGTTCCACGTGGAAGA
TGCAATCATGGCTCGAGAACACATCTGTAGCCTCTGCAATGTGCATCATA
CAGCAGTTACGTTCTCCGTACAGATTAGTCTATAGACTATGTTTTTAGAG
GCCGCTTGCAGTACAAAAAAAGGTCTAGGCGCGTTCTGATTTTTCACGGT
TTGCATGGCACGTTGCGGCCTTCGAGATGCATTTGTGTGGTTGTGCACAT
CCGAAAGGATCGAAGACCACGTACTGTACTACGCCACGGTTGTAAGTAGG
TGCACAGGTTAGCCAATGAGTCTACATGCAGCAGCCTCTCGCGACGTGTT
GTTCGTGACAAGTAAAACATACAGCACACTGTGTACACATTCGACAGACT
TTCCAATAGTTGCAACGTGCAGACGCCTCCTAGTAACCGGCCGGTGAAAA
CTACTTTTTTATTGCCCTTTTATATTTTGATAAGCTGCAAGATAAGAACG
GGTCTTTGGGAAAATCCTGTTAGAAAAACGGTTATCAGAAAACGCGTTTT
CTGATAACATTTTTCGAACAGCATAAGAAGTGGCCTAACGATGGGTTTCT
CCCCGATAAATACTAGTTTGGGGGAACCCGTTTAAATGCCATGAAGAGTT
TTTCCTGTGCAGCCTGTGATCCCACCAAAGAAAACTAAACACGTGACGTG
TTCTGATATTTTCCCCCCTGACTGGGGGACGCTCAGAAGGTCTAGATGGC
TTATATTTTACTTCAAACGTGCTGTGGAAAGCGGGCAAAGTTGAGAATTA
TAAATGATCTACAGAAGTACATACTATTCTATTCATCATACGTTATCCCG
TAGAAGTTTAAAGGTTTTCGTGAAGGGAAAGCAACCATCATTACGTACTT
CTCTACTGATCGAATTTGACATTTACATCGTACAGTACATAATTTCCTCT
TCAGTCAGTAGTGCAATACTTCGGTTTTTCTGGTTTTGGCTGTTTTTCAT
GTACGGATCATAGGCGTCGCCCCCCTACCCCACCCCCGATTTTCCGTTTT
TTCATTGAAGTGGGACTACGACGACGACGGATTTGGTTCCGCCGAAGGCC
GCTTCAACATCGACCTCTTCGAGGCTGACGGCCTAGAAGATTGTGGAACT
TTCTACGCTGCGCTCTGTGACCAGGAGTCTATCGGTTGCAAGGCACCACG
TGAGTTTGCAAGCAATCGGTATATAATGTATTTTGAAGATAATATTTAAC
GGTAAGAGAATCCGAGATGTATTCGTGTTTAATAGTTAACTTTCAAATTA
CTAGTTTGTAGACAGCAGCCATGATAAATTTCTCAAAGGCCGCATACTTT
TTGTCGTTGAAAATGTAAGCGCACCTTTGCCAAAGCTCCTTACTGATTGC
GAACCCTCACCGCCATGGATGGGACGCGCACAAATTTTTCTCTTGTCACA
GAGGGCGTCTTTGACATTGCTATCCCATGCGACGCCAACACGGGAGAATA
CAAGATCCGAGTTGGAGTCTTCGACGACGACTCTACATTCGGCTGCTCGG
ACACATTTACTCTCGTGGGTAGCACGACGACGACGTCCGCGACCTTCGGT
GGGGAGGGCGTCGAACTTAGCATGTCTTTCAGCTTCATGTTCTAAGGGCT
TCTCGGCCTCATCTGGGGTGCTCAAGAAACGAACTCTACCATCTCGGGTA
GAGCGTCGACGATAGTCATGGCCTTCAACGAGGGGGACAAGAAAATGAGC
ACATGTATTTTATGTTTATGCTCTAAGGCCTTGGGGGTCCTTTGGAGTGC
TCAAGGAACGAACGAATGGAATCTATAAGGGGTTGCACAAAAACGTCAAG
GATCGCTAGAACGATTGCCATTGTTGCGTTCCGCGGGGAAAGAAGCAAGT
TCCGACTAACATTTTGCCACTCCGATACACGGGTAGAGAGGGTCCTTCTC
GTTCTCGCCGTACCATTGCGAGTTAGGGAGAGCACCGTTTTCTCACCTTG
AAGTCGATTGTGTGAGGGTTGTATCATCTATGGTATCCGAGACTGTTCGG
ATGCTCTCTCGAATATAATGAGGAGTGTGTAATCTAAGATAGGCGAGTAT
TCGTTCTTGTCGATGCCACTTTTAAATTTACCGTAATACCTATAGGGTGA
CTGATAGTCCTTGTATTTGCTGCCAAACCCATTAATATTTATAGGTCAAA
GCCCCCACTTGAGGCTCAAATATGTACCCACATATTTATAGATACAGTTC
TGGCATTCGGCGTACTTCTGTATAGCAGTGTGTCCTTGCAGGATTGAGTA
GGCGGCATAGATTGATTGCCTGCTATTAATGGATCCCCTTTGGATTTTGC
GGGTCGGTGGTACTCACTCCATCCTGGTTGCGTTGTATCCATATTCCCTT
CCCTTCCCGCGTTATCGAACCGTGTTTTCATTTCAAGATCAGCTTCTGTC
GGGTGAGGCAAGCGAGCACCACCATATGGTTCGTAGATGGTTTTGTGCGC
CAAGCATTTTTGGTTAAGTTGAGCTCGGCTGAGGATTTCACGGTTGTGTT
GAGTCGAGTAGAGTATTTAGAGTATAGTATTGAAAGCGGTACTCAAGCTT
TGAGTATTTTGAGTCGAGTATGGGAAGTTGTACTCAAGCTTTGAGTATTT
TGAGTCGAGTATGGAAAGTTGTACTC
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Coding sequence (CDS) from alignment at F-serratus_M_contig687:122226..128401-

>mRNA_F-serratus_M_contig687.17930.1 ID=mRNA_F-serratus_M_contig687.17930.1|Name=mRNA_F-serratus_M_contig687.17930.1|organism=Fucus serratus male|type=CDS|length=1680bp|location=Sequence derived from alignment at F-serratus_M_contig687:122226..128401- (Fucus serratus male)
ATGGCTCGGTTTGCCTTGGTCACGCTTACTTGCCTCGCCACCGTCGTCGG
GGCCGCGAGCGCTCTGGAGGTCACAATGCCCAGCGAAGGAAGCGTATACG
TCGCGGGCAGATGGCTCGGTTTGCCTTGGTCACGCTTACTTGCCTCGCCA
CCGTCGTCGGGGCCGCGAGCGCTCTGGAGGTCACAATGCCCAGCGAAGGA
AGCGTATACGTCGCGGGCAGCGTGCGCACAGTAGAGTGGGAGGGTACCGG
AGAGAGCCGATTCGACATTGACCTTTTCTTTTGCGGCTCTTTCTGTCTGG
CGCGTGCGCACAGTAGAGTGGGAGGGTACCGGAGAGAGCCGATTCGACAT
TGACCTTTTCTTTTGCGGCTCTTTCTGTCTGGCGGACGACTGCGGTGAGT
GGGTCACCAGCTTGTGCCCCTTCGGCGAGGCTGGTTGCCCGGACTCAGCG
GGCGACTACGATGTTGTTATGCCCGAGCCAATGACCGGTACATCGAACAT
TAACGACGGCTACAAGATCCGTGTGGCGGACATCAACGACGAGGACAGCA
TGGATTGTTCCGAACCATTCACCCTCCTCCCTTCTTCGGCGGAAACTCCG
ACTACTACTACTGTCGGCCTGGTAGATGGATCCGCCCTTGTCGTCACCTC
ACCCATGGATGGTGACATGGCTGAAGCATGCATGGAGTACACTGTGGAGG
ACGACTGCGGTGAGTGGGTCACCAGCTTGTGCCCCTTCGGCGAGGCTGGT
TGCCCGGACTCAGCGGGCGACTACGATGTTGTTATGCCCGAGCCAATGAC
CGGTACATCGAACATTAACGACGGCTACAAGATCCGTGTGGCGGACATCA
ACGACGAGGACAGCATGGATTGTTCCGAACCATTCACCCTCCTCCCTTCT
TCGGCGGAAACTCCGACTACTACTACTGTCGGCCTGGTAGATGGATCCGC
CCTTGTCGTCACCTCACCCATGGATGGTGACATGGCTGAAGCATGCATGG
AGTACACTGTGGAGTGGGACTACGACGACGACGGATTTGGTTCCGCCGAA
GGCCGCTTCAACATCGACCTCTTCGAGGCTGACGGCCTAGAAGATTGTGG
AACTTTCTACGCTGCGCTCTGTGACCAGGAGTCTATCGGTTGCAAGGCAC
CACTGGGACTACGACGACGACGGATTTGGTTCCGCCGAAGGCCGCTTCAA
CATCGACCTCTTCGAGGCTGACGGCCTAGAAGATTGTGGAACTTTCTACG
CTGCGCTCTGTGACCAGGAGTCTATCGGTTGCAAGGCACCACAGGGCGTC
TTTGACATTGCTATCCCATGCGACGCCAACACGGGAGAATACAAGATCCG
AGTTGGAGTCTTCGACGACGACTCTACATTCGGCTGCTCGGACACATTTA
CTCTCGTGGGTAGCACGACGACGACGTCCGCGACCTTCGGTGGGGAGGGC
GTCGAACTTAGCATGTCTTTCAGCTTCATGTTCTAAAGGGCGTCTTTGAC
ATTGCTATCCCATGCGACGCCAACACGGGAGAATACAAGATCCGAGTTGG
AGTCTTCGACGACGACTCTACATTCGGCTGCTCGGACACATTTACTCTCG
TGGGTAGCACGACGACGACGTCCGCGACCTTCGGTGGGGAGGGCGTCGAA
CTTAGCATGTCTTTCAGCTTCATGTTCTAA
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