mRNA_F-serratus_M_contig6863.17928.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6863.17928.1
Unique NamemRNA_F-serratus_M_contig6863.17928.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig6863.17928.1 vs. uniprot
Match: A0A6H5JT32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT32_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 7.120e-93
Identity = 148/289 (51.21%), Postives = 203/289 (70.24%), Query Frame = 2 
Query:  116 LLLVLAMGTEAVYVKTEEDVPPKYCTVYTHMVKAGGSSIKQKLLIAAREYGVPKPLLC-NQLGASDRACLDAAPNAAVLTGGNVESMRYALGQMGRECEFFTMMRHPIDRAISAFFYCPQDHDVQNRPPEWCGYSDHPKPAKVRLIGFLKNMWGNKAFRQFSSSLHCSPGLPCPEQQIKRASVLAQNKA--TLKEVEVVMQTYTAMGIMEYWDLSMQLFDAKVKSPVRVWNEERHANPGDPSPLRDEVYRWAHRSPEIHTILSTDLLLYTYALSLFKLQTNETLGTQWD 973
            LL + A+G +A+Y  +    PP+YCT++ HMVK+GGS+IK KL IAA+  GV  P +C N +G  D +CL A  +A V+ G   E +RY L  +GRECE+FT+MRHPIDR +SAFFYCP   DVQ+RPP+WCGY++ P+P   RL+ F K  W NKAFRQ +  L+C P   C + +      + +      L+++E ++ TYTA+GI+EYWDLSMQLF+A+V SPV  W +  H+N G  S LRDEV+RWAH SPEIH +++TD+LLY Y++S+FKLQT+ +LGT W+
Sbjct:  104 LLSLRAIGCDALYAWSNPGEPPEYCTLFNHMVKSGGSTIKDKLDIAAKADGVDGPAMCVNGVGYED-SCLKAMHSAPVIVG-YAELLRYPLEVIGRECEYFTVMRHPIDRLLSAFFYCPAYGDVQDRPPKWCGYANDPQPVTDRLVEFAKYGWKNKAFRQMTFGLYCPPNAFCEQAEPGAQQAVHEPGGWILLEQIEAILATYTAVGILEYWDLSMQLFNARVTSPVWDWEDMEHSNRGQRSGLRDEVHRWAHMSPEIHRVMATDMLLYDYSVSVFKLQTSASLGTIWE 390
[Close]
BLAST of mRNA_F-serratus_M_contig6863.17928.1 vs. uniprot
Match: D7G5K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K0_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 6.750e-92
Identity = 141/284 (49.65%), Postives = 197/284 (69.37%), Query Frame = 2 
Query:  125 VLAMGTEAVYVKTEEDVPPKYCTVYTHMVKAGGSSIKQKLLIAAREYGVPKPLLCNQLGASDRACLDAAPNAAVLTGGNVESMRYALGQMGRECEFFTMMRHPIDRAISAFFYCPQDHDVQNRPPEWCGYSDHPKPAKVRLIGFLKNMWGNKAFRQFSSSLHCSPGLPCPEQQIKRASVLAQNKAT--LKEVEVVMQTYTAMGIMEYWDLSMQLFDAKVKSPVRVWNEERHANPGDPSPLRDEVYRWAHRSPEIHTILSTDLLLYTYALSLFKLQTNETLGTQW 970
            +L +G++ +Y ++E   PP+YCTV+ HMVK+ GS++K  L  A R  G+P+P +C    A   ACL+A  ++A++TG   E +RY L    REC++FTM+RHPIDR +SAFFYCP DHDVQ RP +WCG+++HP PA  RL+ F +  W NKAF+Q +  L+C P   C E +++   +L +      L++V+  +  YTA+GIME+WDLSMQLF+A+V+SPVR WN  +  NPG  S LRDEV +WAH SP IH ++ TD+LLY +ALS+FK QT  +LGT W
Sbjct:  126 LLVVGSDTLYARSEPGEPPEYCTVFHHMVKSAGSTVKSLLHRATRNEGLPRPAVCINGHARTDACLEAINSSAIITG-YAELIRYPLEVNRRECDYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHAEHPVPATERLLDFAQESWQNKAFKQMTFGLYCPPDTFCDEAEVESPQMLDEPGMLDILQQVQNTLAGYTAVGIMEHWDLSMQLFNARVRSPVREWNMFKQRNPGVMSGLRDEVLQWAHESPAIHRVIGTDMLLYYFALSIFKQQTTASLGTNW 408
[Close]
BLAST of mRNA_F-serratus_M_contig6863.17928.1 vs. uniprot
Match: A0A6H5L5I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5I1_9PHAE)

HSP 1 Score: 295 bits (755), Expect = 3.550e-90
Identity = 138/289 (47.75%), Postives = 200/289 (69.20%), Query Frame = 2 
Query:  119 LLVLAMGTEAVYVKTEEDVPPKYCTVYTHMVKAGGSSIKQKLLIAAREYGVPKPLLCNQLGASD-RACLDAAPNAAVLTGGNVESMRY--ALGQMGRECEFFTMMRHPIDRAISAFFYCPQDHDVQNRPPEWCGYSDHPKPAKVRLIGFLKNMWGNKAFRQFSSSLHCSPGLPCPEQQIKRASVLAQNKA--TLKEVEVVMQTYTAMGIMEYWDLSMQLFDAKVKSPVRVWNEERHANPGDPSPLRDEVYRWAHRSPEIHTILSTDLLLYTYALSLFKLQTNETLGTQW 970
            L +L +G++A Y ++E   PP+YCTV+ HMVK+GGS+I           G P+P LC   G     +C +A  ++AV+ G   E+MR    L  + ++CE+FT++RHP+DR +SAFFYCP++HDVQ+RPP+WCGY+DHP PA  RL+ + +  W N A++Q +  ++C  GL C   +++ A  L +      L++VE ++  YTA+GIME+WDLSMQLF+A+V+SPVR WN  +H+N G PS LRDEV +WAH SP +H +++TD+LLY++ALS+FK QT E LGT W
Sbjct:   18 LSLLVVGSDAFYARSEPGQPPEYCTVFHHMVKSGGSTIXXXXXXXXXSAGDPRPGLCVAGGGEKTNSCKEAFNSSAVIMG-YAEAMRQDVPLEAVRKDCEYFTLLRHPVDRLVSAFFYCPKEHDVQSRPPKWCGYADHPLPATDRLLDYAQQYWKNMAYKQMAFGMYCPHGLICEATEVRTAPGLDEPHGLDVLQKVEDILSRYTAVGIMEHWDLSMQLFNARVRSPVREWNITQHSNAGLPSELRDEVLQWAHDSPVVHRLIATDMLLYSFALSIFKRQTTEALGTNW 305
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BLAST of mRNA_F-serratus_M_contig6863.17928.1 vs. uniprot
Match: A0A6H5JT23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT23_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 7.490e-89
Identity = 142/289 (49.13%), Postives = 199/289 (68.86%), Query Frame = 2 
Query:  119 LLVLAMGTEAVYVKTEEDVPPKYCTVYTHMVKAGGSSIKQKLLIAAREYGVPKPLLCNQLGASD-RACLDAAPNAAVLTGGNVESMRY--ALGQMGRECEFFTMMRHPIDRAISAFFYCPQDHDVQNRPPEWCGYSDHPKPAKVRLIGFLKNMWGNKAFRQFSSSLHCSPGLPCPEQQIKRASVLAQNKA--TLKEVEVVMQTYTAMGIMEYWDLSMQLFDAKVKSPVRVWNEERHANPGDPSPLRDEVYRWAHRSPEIHTILSTDLLLYTYALSLFKLQTNETLGTQW 970
            L +L +G++  Y ++E   PP+YCTV+ HMVK+GGS+IK  L I++R  G P+P  C   G     +C +A  ++AV+ G   E MR    L  + R+CE+FT++RHP+DR +SAFFYCP DHD+Q RPP+WCGY+D P PA  RL+ F +  W N A++Q +  ++C  GL C   +++ A  L +      L++VE ++  YTA+GIME+WDLSMQLF+A+V+SPVR WN    +N G PS LRDEV +WAH SP IH +++TDLLLY++ALS+FK QT E+LGT W
Sbjct:   18 LSLLVVGSDTFYARSEPGQPPEYCTVFHHMVKSGGSTIKHNLHISSRAAGGPRPGSCVAGGGKRINSCKEAFNSSAVIMG-YAELMRQDGPLEAVRRDCEYFTLLRHPVDRLVSAFFYCPTDHDLQLRPPKWCGYADDPLPATDRLLEFAQQHWKNMAYKQMTFGMYCPHGLICEATEVETAPGLDEPHGLDVLQKVEDILSGYTAVGIMEHWDLSMQLFNARVRSPVRDWNMTVRSNAGLPSELRDEVLQWAHDSPVIHRLMATDLLLYSFALSIFKRQTTESLGTNW 305
[Close]
BLAST of mRNA_F-serratus_M_contig6863.17928.1 vs. uniprot
Match: D8LHT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHT4_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 1.440e-73
Identity = 126/282 (44.68%), Postives = 173/282 (61.35%), Query Frame = 2 
Query:  137 GTEAVYVKTEEDV-PPKYCTVYTHMVKAGGSSIKQKLLIAAREYGVPKPLLCNQLGASDRACLDAAPNAAVLTGGNVESMRYALGQMGRECEFFTMMRHPIDRAISAFFYCPQDHDVQNRPPEWCGYSDHPKPAKVRLIGFLKNMWGNKAFRQFSSSLHCSPGLPCPEQQIKRASVL---AQNKATLKEVEVVMQTYTAMGIMEYWDLSMQLFDAKVKSPVRVWNEERHANPGDPSPLRDEVYRWAHRSPEIHTILSTDLLLYTYALSLFKLQTNETLGTQW 970
            G +A+Y +   D  PP YCT++ HMVK GG++++ +L++A+   G   P LC    +S  ACLDA  +++V+ G  VE +R  + ++GR C++FTMMRHPIDR +SAF+YCP  HD Q RP +WCG   HP P   RL+ F +  W  KA  Q S + +C PG  C    ++         ++ + L   E V+ +YTA+GI E W+LSM+LFDA + SPV+ W  E   NPG  S  R+ + RWAH SPEI   +  DLLLY  ALS+FK QT E LGT W
Sbjct:   11 GCQAIYTRASMDTDPPTYCTMFHHMVKNGGTAVRDQLILASEIQGRDVPGLCVIGPSSAEACLDALHHSSVIMG-YVELLRDPMEELGRRCDYFTMMRHPIDRLVSAFYYCPTFHDKQVRPNKWCGGHSHPDPLTSRLLDFAREDWMCKAMFQLSFASYCPPGAFCEHDMVEEPPTHLNGVEDWSLLAVAEDVLLSYTAVGIFEEWELSMELFDAVISSPVQQWGGEEAVNPGPKSSEREMLLRWAHSSPEIRQAVGGDLLLYDLALSIFKRQTAEALGTVW 291
[Close]
BLAST of mRNA_F-serratus_M_contig6863.17928.1 vs. uniprot
Match: A0A6H5K0M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0M4_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 1.570e-71
Identity = 112/223 (50.22%), Postives = 157/223 (70.40%), Query Frame = 2 
Query:  314 ACLDAAPNAAVLTGGNVESMR--YALGQMGRECEFFTMMRHPIDRAISAFFYCPQDHDVQNRPPEWCGYSDHPKPAKVRLIGFLKNMWGNKAFRQFSSSLHCSPGLPCPEQQIKRASVLAQNKA--TLKEVEVVMQTYTAMGIMEYWDLSMQLFDAKVKSPVRVWNEERHANPGDPSPLRDEVYRWAHRSPEIHTILSTDLLLYTYALSLFKLQTNETLGTQW 970
            ACL+A  ++A++TG   E +R  Y L    REC++FTM+RHPIDR +SAFFYCP DHDVQ RP +WCG+ +HP PA  RL+ F +  W N+AF+Q +  L+C P   C E ++    +L +      L++V+ ++  YTA+GIME+WDLS+QLF+A+V+SPVR WN  +  NPG  + LRDEV +WAH+SP IH ++ TD+LLY++ LS+FK QT  +LGT W
Sbjct:   32 ACLEAINSSAIITG-YAELIRRVYPLEVERRECQYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWRNQAFKQMTFGLYCPPDTFCEEAEVDSPQMLDEPGILDVLQQVQDILAGYTAVGIMEHWDLSIQLFNARVRSPVREWNVSKQRNPGVMTRLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTNW 253
[Close]
BLAST of mRNA_F-serratus_M_contig6863.17928.1 vs. uniprot
Match: A0A6H5JUF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF0_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 2.120e-64
Identity = 105/226 (46.46%), Postives = 141/226 (62.39%), Query Frame = 2 
Query:  377 YALGQMGRECEFFTMMRHPIDRAISAFFYCPQDHDVQNRPPEWCGYSDHPKPAKVRLIGFLKNMWGNKAFRQFSSSLHCSPGLPC----------------------------PEQQIKRASVLAQNKATLKEVEVVMQTYTAMGIMEYWDLSMQLFDAKVKSPVRVWNEERHANPGDPSPLRDEVYRWAHRSPEIHTILSTDLLLYTYALSLFKLQTNETLGTQW 970
            Y L    REC++FTM+RHPIDR +SAFFYCP DHDVQ RP +WCG+ +HP PA  RL+ F +  W N+AF+Q +  L+C P   C                            P Q +    +L      L++V+ ++  YTA+GIME+WDLSMQLF+A+V+SPVR WN  +  NPG  + LRDEV +WAH+SP IH ++ TD+LLY++ LS+FK QT  +LGT W
Sbjct:    5 YPLEVERRECQYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWRNQAFKQMTFGLYCPPDTFCEVAEVNNVSQCETFVVGVGSLDGLREVGPPQMLDEPGILD----VLQQVQDILAGYTAVGIMEHWDLSMQLFNARVRSPVREWNVFKQRNPGVMTGLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTNW 226
[Close]
BLAST of mRNA_F-serratus_M_contig6863.17928.1 vs. uniprot
Match: D7FJX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX1_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 5.120e-40
Identity = 72/143 (50.35%), Postives = 92/143 (64.34%), Query Frame = 2 
Query:  422 MRHPIDRAISAFFYCPQDHDVQNRPPEWCGYSDHPKPAKVRLIGFLKNMWGNKAFRQFSSSLHCSPGLPCPEQQIKRASVLAQNKATLKEVEVVMQTYTAMGIMEYWDLSMQLFDAKVKSPVRVWNEERHANPGDPSPLRDEV 850
            MRHPIDR +SAFFYCP D DVQ+RP +WCGY++ P+P   RL+ F +  W NKAFRQ +  L+C P   C                  ++ E ++ TYTA+GI+EYWDLSMQLF+A+V SPV  W +  H+N G  S LRDEV
Sbjct:    1 MRHPIDRLLSAFFYCPADGDVQDRPTKWCGYANDPQPVTDRLVEFAEYGWKNKAFRQMTFGLYCPPNAFC------------------EQAEGILATYTAVGILEYWDLSMQLFNARVTSPVWDWEDMEHSNRGQRSGLRDEV 125
[Close]
BLAST of mRNA_F-serratus_M_contig6863.17928.1 vs. uniprot
Match: D7FUF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF7_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 8.610e-36
Identity = 66/137 (48.18%), Postives = 92/137 (67.15%), Query Frame = 2 
Query:  566 MWGNKAFRQFSSSLHCSPGLPCPEQQIKRASVLAQNKAT--LKEVEVVMQTYTAMGIMEYWDLSMQLFDAKVKSPVRVWNEERHANPGDPSPLRDEVYRWAHRSPEIHTILSTDLLLYTYALSLFKLQTNETLGTQW 970
            MW N AF+Q +  L+C P   C E Q+    ++ +      L++VE ++  Y A+GIME+W LSM+LF+A+V+SPVR WN  +  NPG  S LRD+V +WAH +P IH +L  D+LLY++ALS+FK QT E LGT W
Sbjct:    1 MWQNLAFKQMTYGLYCPPEAICGEMQLDAPQMVDEPGGLDLLQQVEDILAGYAAVGIMEHWGLSMELFNARVRSPVREWNRFKQKNPGVTSGLRDQVLQWAHENPAIHRVLGADMLLYSFALSIFKQQTAEALGTNW 137
[Close]
BLAST of mRNA_F-serratus_M_contig6863.17928.1 vs. uniprot
Match: A0A6H5J534_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J534_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 1.140e-34
Identity = 71/166 (42.77%), Postives = 103/166 (62.05%), Query Frame = 2 
Query:  152 YVKTEEDVPPKYCTVYTHMVKAGGSSIKQKLLIAAREYGVPKPLLCNQLGASDRACLDAAPNAAVLTGGNVESMRYALGQMGRECEFFTMMRHPIDRAISAFFYCPQDHDVQNRPPEWCGYSDHPKPAKVRLIGFLKNMWGNKAFRQFSSSLHCSPGLPCPEQQIK 649
            Y +++ D PP+YCTV+ HMVK+ GS+IK  L  ++R  GVP+P      G + R C  A  +     G      R  L  + + CE+FT+MRHPIDR +SAFFYCP+DHD+Q RP +WCGY+DH  P   RL+ F ++ W N A++Q +  ++C P L C   +++
Sbjct:  577 YARSDPDQPPEYCTVFHHMVKSAGSTIKDNLYKSSRIAGVPRP------GGTTR-CATACHSIPFPLG----RARVPLEAVRKGCEYFTLMRHPIDRLVSAFFYCPKDHDLQLRPRKWCGYADHQVPVTDRLLDFTEHYWQNMAYKQMAYGMYCPPDLICEATEVR 731
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6863.17928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5JT32_9PHAE7.120e-9351.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5K0_ECTSI6.750e-9249.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5I1_9PHAE3.550e-9047.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT23_9PHAE7.490e-8949.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHT4_ECTSI1.440e-7344.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K0M4_9PHAE1.570e-7150.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUF0_9PHAE2.120e-6446.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJX1_ECTSI5.120e-4050.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUF7_ECTSI8.610e-3648.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J534_9PHAE1.140e-3442.77Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6863contigF-serratus_M_contig6863:4558..10214 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score101.3
Seed ortholog evalue8.1e-19
Seed eggNOG ortholog2880.D7G716
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-03_000360.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size2344
Cds size897
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6863.17928.1prot_F-serratus_M_contig6863.17928.1Fucus serratus malepolypeptideF-serratus_M_contig6863 4637..8846 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932098.6739624-UTR-F-serratus_M_contig6863:4557..46361622932098.6739624-UTR-F-serratus_M_contig6863:4557..4636Fucus serratus maleUTRF-serratus_M_contig6863 4558..4636 +
1690964146.1331563-UTR-F-serratus_M_contig6863:4557..46361690964146.1331563-UTR-F-serratus_M_contig6863:4557..4636Fucus serratus maleUTRF-serratus_M_contig6863 4558..4636 +
1622932098.8590539-UTR-F-serratus_M_contig6863:8846..102141622932098.8590539-UTR-F-serratus_M_contig6863:8846..10214Fucus serratus maleUTRF-serratus_M_contig6863 8847..10214 +
1690964146.2490325-UTR-F-serratus_M_contig6863:8846..102141690964146.2490325-UTR-F-serratus_M_contig6863:8846..10214Fucus serratus maleUTRF-serratus_M_contig6863 8847..10214 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932098.692534-CDS-F-serratus_M_contig6863:4636..47051622932098.692534-CDS-F-serratus_M_contig6863:4636..4705Fucus serratus maleCDSF-serratus_M_contig6863 4637..4705 +
1690964146.1461275-CDS-F-serratus_M_contig6863:4636..47051690964146.1461275-CDS-F-serratus_M_contig6863:4636..4705Fucus serratus maleCDSF-serratus_M_contig6863 4637..4705 +
1622932098.7236109-CDS-F-serratus_M_contig6863:5036..51691622932098.7236109-CDS-F-serratus_M_contig6863:5036..5169Fucus serratus maleCDSF-serratus_M_contig6863 5037..5169 +
1690964146.1562507-CDS-F-serratus_M_contig6863:5036..51691690964146.1562507-CDS-F-serratus_M_contig6863:5036..5169Fucus serratus maleCDSF-serratus_M_contig6863 5037..5169 +
1622932098.73816-CDS-F-serratus_M_contig6863:5422..55161622932098.73816-CDS-F-serratus_M_contig6863:5422..5516Fucus serratus maleCDSF-serratus_M_contig6863 5423..5516 +
1690964146.1734517-CDS-F-serratus_M_contig6863:5422..55161690964146.1734517-CDS-F-serratus_M_contig6863:5422..5516Fucus serratus maleCDSF-serratus_M_contig6863 5423..5516 +
1622932098.7563055-CDS-F-serratus_M_contig6863:5786..58661622932098.7563055-CDS-F-serratus_M_contig6863:5786..5866Fucus serratus maleCDSF-serratus_M_contig6863 5787..5866 +
1690964146.186166-CDS-F-serratus_M_contig6863:5786..58661690964146.186166-CDS-F-serratus_M_contig6863:5786..5866Fucus serratus maleCDSF-serratus_M_contig6863 5787..5866 +
1622932098.7726333-CDS-F-serratus_M_contig6863:6261..63081622932098.7726333-CDS-F-serratus_M_contig6863:6261..6308Fucus serratus maleCDSF-serratus_M_contig6863 6262..6308 +
1690964146.1984937-CDS-F-serratus_M_contig6863:6261..63081690964146.1984937-CDS-F-serratus_M_contig6863:6261..6308Fucus serratus maleCDSF-serratus_M_contig6863 6262..6308 +
1622932098.7919486-CDS-F-serratus_M_contig6863:6812..69531622932098.7919486-CDS-F-serratus_M_contig6863:6812..6953Fucus serratus maleCDSF-serratus_M_contig6863 6813..6953 +
1690964146.2092254-CDS-F-serratus_M_contig6863:6812..69531690964146.2092254-CDS-F-serratus_M_contig6863:6812..6953Fucus serratus maleCDSF-serratus_M_contig6863 6813..6953 +
1622932098.8246195-CDS-F-serratus_M_contig6863:7706..77601622932098.8246195-CDS-F-serratus_M_contig6863:7706..7760Fucus serratus maleCDSF-serratus_M_contig6863 7707..7760 +
1690964146.2211065-CDS-F-serratus_M_contig6863:7706..77601690964146.2211065-CDS-F-serratus_M_contig6863:7706..7760Fucus serratus maleCDSF-serratus_M_contig6863 7707..7760 +
1622932098.8395343-CDS-F-serratus_M_contig6863:8567..88461622932098.8395343-CDS-F-serratus_M_contig6863:8567..8846Fucus serratus maleCDSF-serratus_M_contig6863 8568..8846 +
1690964146.238973-CDS-F-serratus_M_contig6863:8567..88461690964146.238973-CDS-F-serratus_M_contig6863:8567..8846Fucus serratus maleCDSF-serratus_M_contig6863 8568..8846 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6863.17928.1

>prot_F-serratus_M_contig6863.17928.1 ID=prot_F-serratus_M_contig6863.17928.1|Name=mRNA_F-serratus_M_contig6863.17928.1|organism=Fucus serratus male|type=polypeptide|length=299bp
MLLVNGTALAGGLLLVLAMGTEAVYVKTEEDVPPKYCTVYTHMVKAGGSS
IKQKLLIAAREYGVPKPLLCNQLGASDRACLDAAPNAAVLTGGNVESMRY
ALGQMGRECEFFTMMRHPIDRAISAFFYCPQDHDVQNRPPEWCGYSDHPK
PAKVRLIGFLKNMWGNKAFRQFSSSLHCSPGLPCPEQQIKRASVLAQNKA
TLKEVEVVMQTYTAMGIMEYWDLSMQLFDAKVKSPVRVWNEERHANPGDP
SPLRDEVYRWAHRSPEIHTILSTDLLLYTYALSLFKLQTNETLGTQWD*
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mRNA from alignment at F-serratus_M_contig6863:4558..10214+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6863.17928.1 ID=mRNA_F-serratus_M_contig6863.17928.1|Name=mRNA_F-serratus_M_contig6863.17928.1|organism=Fucus serratus male|type=mRNA|length=5657bp|location=Sequence derived from alignment at F-serratus_M_contig6863:4558..10214+ (Fucus serratus male)
GGATAATTACACACCCTTCTTGCGGCGGCTGCATCAGATCCTCGTTTTCC
CGATTGTCCGGGTTCTCCGAGAGCGCGAAATGCTTTTGGTCAATGGAACA
GCGCTCGCAGGGGGGCTGCTGCTGGTGTTGGCAATGGGAACTGAGGCGGT
GAGTTTCACCTGTGTGAATCGATGACCGTGCTTGAATCGACGGTTGGTTG
TAAAAGCCTGCCTTCCCCCTGGCTAAAGGCCTCACGATCGCGACACGCAT
TCTATCGTCTACGGACCCCTGCTTTTAGATATGGATGCACCATGGGCGTA
CAAAAAAGCCGAAACTGTTAACAACGACGGCGTGCCAGCCTTTGAGTTGA
GATTGGGGCAAAGTCCCCCTCGACGAAATACACATATAATACAAACGGAA
TGGTTTGCGTGCCCCCTATTCACGAGTCTGTTCTTAATTCGTTGCACCTT
TCTTTCCCCCGACCGTATCCGAGGACCAGGTCTACGTTAAGACCGAAGAG
GACGTTCCACCCAAGTACTGCACGGTCTACACCCACATGGTGAAGGCTGG
AGGCTCGTCGATAAAACAAAAGCTTCTGATCGCCGCTCGTGAATACGGCG
TGCCTAAGCCACGTACGTTTTACCAATGGAGTTGTGCAACGTTTTCCAGC
CTCAAGCGTCACAGCCCCCCCCCCTTCCCTCCCATGCCGATTGTTTGCAT
GTCGATTGCACCATTGTTTAGTTGGTTACGGTTGCAGTATGGTTGCCCGT
GCGCGCATTATTGTGACCCTCGTTGCACCCGAGGTCGCGTTCACCACGAG
AACAACTACGCAAAGCCGGTGCGCATGCTGCGATCGGTGATTTGCCCTCC
TTCGCCGCTTTCAAGTGTTGTGCAACCAGCTAGGAGCCTCCGATCGGGCC
TGCTTGGACGCGGCGCCGAACGCTGCGGTGTTGACGGGAGGGAACGTCGA
AAGTATGAGGTGAGGTGAAACAATCTGTCGTCGCCACTTTCGGCGCGGCA
GATGATCTGACGTGGCCCTCCGTACGAAGGCAGCGGGAAGTAGTAGAAAC
AAGGCATGAGTATAACTACGAAACTTCCTGTGAAGTACGCTTCATGGGGC
GTTCGTGCAGAAGGCCCCGGAGAGCACCTCCAGCGGCGCGCGGACACACA
TCAACAGGCGTTTTTTTTACAGTGGGAGCATTGGTCGATCGTCGCCAAGC
GAATTTCGTTTCGCCGTTTACCCCCTCAGATACGCGTTAGGTCAGATGGG
GCGGGAGTGCGAGTTCTTCACGATGATGAGGCACCCCATCGATCGAGCGA
TCTCCGCATGTGAGCACAAACTTCCACTCGAAGGTTCTTGAGATGATGAT
GACCTTGGGGTAACACTAGCTTCAAGCCTGCTAATTTGTTTGATCAATAT
TTTTCCATGCTTCTAGCAATCTTGCCAGTCCAGCCCGCGTGTAGCAACTG
CCTTGCCCCCGTCCTAGAATAGCCCAGGTACTGTTAAATGCCATGCATGG
TGTGGACAGCCTCGGCGCGATCTTGGGATCCGTGACGGTGCAGTTTGTCG
TACGGCAGTTTATTTTTTTGGGTGCCCCACGCGCGTAGCTCTAGGCGTTT
GGCCTATTTAGAAGAACACTATAGCATATTCTATCTTTTCGGCTGATAGT
TCCGCACCGTCCAACTGCCGCCAACCTCTCGCTTCCCACCACGACCTTTT
TCAGTCTTCTATTGCCCGCAAGATCATGACGTTCAGAACCGGCCCCCAGA
GGTGTGCGGTGTGTTTGGATGTTGCGGGCGTGTTTGCTGGGGGGAAGTAT
CCTCATGAACATGTCTCTAATAGGCGAAGCCGTCGTCAGCTCGGGGCGGT
CAGAGCTGACCCTTCGGGCTGTGGTTATTTAGCGTACAATCTCCGATACA
ACCTCCGCCGTCGTTCGTTGCTCAGTGTGGCGGGGTTCTCTGACTCACGG
TTCGTGCGGCATATTGCACGGGATGCGTCTTCAGTGCTGCAAGGGCGCCT
TCAATTTTTTTTGCCCCCCCCCCGCCGTTTTCGGGTTGAAATGGACAGCG
AAAGGCCTATAATAGTAGAACGTGTGTAGTAGATTCGTTCGTGCATGCAA
AGGCCCCGTCGCGATGGATTTACTTGTCACCGCCTGCACCAACGTTTCCA
TACCGCCTCCTCCCTTGAGCAAGCGCGGGCACGACAACTTCAAGCATTTG
AACTCGTATGTGCACGCCCCCCTGGTGCTTCTTTTTACTGCTTTTACCGA
AACAGTGGTGCGGGTACTCTGACCACCCGAAGCCGGCGAAAGTGCGGCTG
ATTGGATTCTTGAAGAACATGTGGGGAAACAAGGCCTTTCGTCAGTTTTC
CTCCAGCTTACACTGTAGTCCGGGCCTTCCTTGTCCCGAGCAACAGGTGA
AGTCAACGCCGTCGCGATCATCTTTGTCCCGCGCTATGTCCCCGTCAAAA
CGACCCGTCGTGGAATTCGCTCGGGGTTCAGGGTACGCGGGAGTTGTCTA
CCGCGCCCCTGAACGCACGAGAACTAGCTAGTTGCGCGTTTGCCCCATTT
TTTTTCTGAAAACCAGGATCGCCTTCTATCCAAACACTGGTGCCGGTGCA
CGTACACCTTTCGTGTTACACCATTCATTTTACTGATCATATTCTCAGCT
TTGAGCAAAAGACAAAGCCTCCCGACCATAGTTAAAACCGTTGCCTCCAC
AGACTCTTGCGTGTGTAGCATTGCTGGTTAGCGTGTCACTTTACAGCCAG
AAATGCACAGAAATACGAGCGATGGAAATGCGGGCTTTTTATGCCCCTCA
GTGGCTAGAGCGGGTGTTGACTTATGTACGGTATGAATTAGTAAGGCGTG
TGTGTGGGAGGCGCAAGGAAGATGTTCGCTACACAGCCGGGGGTAAAGAG
AAAAACCACAGGTGGTTTGTATATATATATATATGTATTGTTTTCGTTGC
CTTCCTGGAGGTTGGACACTTCTGGCAATTGGTCCTACCAACGTACTTGA
TTACCTTTGAAAGACCTCTCCTCTACAGCGACCTTGCCCATCCTCTCCGC
TGAGTGGACCCATAATTGCTTCTCAAGCCCCGCCGTCGGCAACGTCTTGC
CTTCTGCGCATCGCTTGGATATCTTTCTCTCGCTGTTCGCATAACTCAGA
TCAAGAGAGCGTCCGTGTTGGCACAAAACAAGGCCACGCTGAAGGAAGTG
GAGGTGAGGGGTCCGAACCTGCTGGGAACAGAAACACGATGATCCCCCCC
CCACGCATGAAAACGTAGTATTGACTAATACCAAAGCGCTATTGATGGAG
CTACACACTTTGTACAAAATAGAGGACATGGGCGTGGAAATGAAATGCTC
ACGAATGCGATCGAAGCGCGTCGGTGCGTTGTTCCTATTGCTGTAATAGT
TCAAGGTGTTCCGCGCTTCTCCTTTTTAAAGACCATACCTTGTAGCTGGA
ATTCCTGTTGGCCCAGTCGCTCCTGAAGGGTCGCTCTTGAGCTTTTGGGT
GTGGGGAAGGATCTAATGGGTTGTCTTGTACAGAGCCATCGAGCTAAGGC
AGCTTTGGGCCAGGGAAGAAGAGCTTGCCCTCCGATATGGTTTTTGTCTG
GCCGGTAGAGTTTGAGTGACCTTCCCGACGGAAACTTCTTTTCTTCCCCG
TGATTTGGGAGAGGACGCTCATAATGGAGCTCTGGAGCTCTCTCTGTGGT
GAACGCTTTTGAGATACTCCTGATTTAGGGGTTGGAAATCATAACGTCCA
CGTTGGGAGTCCCTGGTTTCCTCCCATGACTGTCGTGCACTACTGGAGAT
CTAATGCTTGCCGACCTTACATAATGGCATCCCAAAGGACGTTCGAGAAA
AAGCACATGGGTGCCACATTCCACAAGCGAAGATGTGCACCGGGAATCGT
GCGAAGTTGCCCGCCCCCCCCCGGTCCCGCTTTCCCCTCCCCTCCCCTCC
CCCCGTGCTATCGCATATCCATGCATCACCCTCCGCGCGCTTCCCGCATC
GTTTCGGTAGGTCGTTATGCAGACTTACACCGCAATGGGCATAATGGAAT
ACTGGGACTTATCGATGCAGCTATTCGACGCAAAGGTCAAAAGCCCCGTT
CGTGTCTGGAACGAGGAGAGGCACGCTAATCCAGGGGATCCATCCCCTCT
ACGGGACGAAGTCTACCGGTGGGCGCACAGGAGTCCGGAGATCCACACGA
TCTTGTCGACCGACCTTCTCCTTTACACCTACGCCCTTTCCTTGTTTAAG
CTGCAAACAAACGAAACGCTTGGAACCCAGTGGGATTAATTAATAATTTG
TTGTTGTTGCGAAAACAGATCGAGTAGCGAGAACAATCTATCCCTGTGAC
CTGCCTGCCATGTGTGTGGATAAACAACACACGAAGTAGCGAGAACAATC
CCTGTGACCTGCCTGCCATGTGTGTGGATAAACAACACACGAAACGTGGA
GGGCCGTGAAGCATTCGAGAGTCTCTCGGCGCTTGCTTCTCTTGTTCGGA
GTCTGTGTGTCTCCTGTGCGCTGCGGACATCGTTTGTTGCAAAGGTTCGC
TTGCAGGTGGAGCTGTTTTTTCACGTTTCATATTTATTTTTTGGACGAGA
TATTCTTGTGCCGTATCATTTTTTGTTGTTGTTGTTGTCTTTGGTGCTGT
TATTGAAGCACGTTTTGTATCAAACCTTTGGCATTATCTGTGCGGAAAAT
ATGCCTTGTGTTTGTATTTAATTCGGTCGTCGCGGTGCGATCTCGTGGCG
GTATCAGAAGCTTCCGGTGTATCGCCGTACGTTTTCCCCCCAGTTTTTGT
GTCTTTTTATTTATAAATATTTTATTTTTGTTTCGATAGCTGTATATCGT
TCCTTCAAGACTTGACCGCCAGCTCGTTACTGTAGGGTACTGGTGAGAAT
TTTGCGATGACCGCCAGCCCGTTACTGTAGAGTACTGGTGATAATTTTGC
ATGTGATGGGTCTCTATGGAACTAAGGTTACACGTTGTTTTTTTCAGCCA
TCATGAATAAGAGGAAGCGCACTGAATGTCACGTGATATCTACGTGTGAC
CCAAGTAGTCAAGCGGTTGACGTCTCGCCTCCCCATATTCGCTGCATTGG
CGGGCAGGTTGGGTCGAGGGTTCTAACCATCGCATCCCCCATCGATATGC
TAGTTGCCCTCTCGGGGATGAACCGAGGTCACGAATCGTGTTTTTAAAGC
CCGAAAAAATGACTTGGGTCGGTTAGAGATAAGTGGCGTTCCTTGGGTGG
GGAATGCTAGGGAGTTCGCTTTATCGCGAAGACCACTGTGCTCGTAAGAA
ATCCGAAGACAACTTCACATGGTGCTTGTGTTCATTAGAAAACTATAGTA
CTATGCCGACTTTTGTTGATGGTTCTAGACTCGCTTGTCTGTGCTCGAGT
TTTTGTACCCGTGGTTTGACACTGCGAGAGCCTTGAGATCGCACGAAGCC
GCGCGATCTTCCGCGCAGATTGTTGTCGGTCAGTGATCTCCTAGCTGTCT
GCTTTACAGATCATAAGCGTATAAAAGGGTAGGCCTTTGCTCCTTATGCG
CCCTAAAGTCGTATTATTTCGGTGCCCAAGCGGAAAAACCTCGTTTTTTT
TTTCGGCGCCGCCTCGTTATGGTGTTCGGCGGCCAAATAACTTTTTCGTC
CTCCCAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig6863:4558..10214+

>mRNA_F-serratus_M_contig6863.17928.1 ID=mRNA_F-serratus_M_contig6863.17928.1|Name=mRNA_F-serratus_M_contig6863.17928.1|organism=Fucus serratus male|type=CDS|length=1794bp|location=Sequence derived from alignment at F-serratus_M_contig6863:4558..10214+ (Fucus serratus male)
ATGCTTTTGGTCAATGGAACAGCGCTCGCAGGGGGGCTGCTGCTGGTGTT
GGCAATGGGAACTGAGGCGATGCTTTTGGTCAATGGAACAGCGCTCGCAG
GGGGGCTGCTGCTGGTGTTGGCAATGGGAACTGAGGCGGTCTACGTTAAG
ACCGAAGAGGACGTTCCACCCAAGTACTGCACGGTCTACACCCACATGGT
GAAGGCTGGAGGCTCGTCGATAAAACAAAAGCTTCTGATCGCCGCTCGTG
AATACGGCGTGCCTAAGCCACGTCTACGTTAAGACCGAAGAGGACGTTCC
ACCCAAGTACTGCACGGTCTACACCCACATGGTGAAGGCTGGAGGCTCGT
CGATAAAACAAAAGCTTCTGATCGCCGCTCGTGAATACGGCGTGCCTAAG
CCACTGTTGTGCAACCAGCTAGGAGCCTCCGATCGGGCCTGCTTGGACGC
GGCGCCGAACGCTGCGGTGTTGACGGGAGGGAACGTCGAAAGTATGAGTG
TTGTGCAACCAGCTAGGAGCCTCCGATCGGGCCTGCTTGGACGCGGCGCC
GAACGCTGCGGTGTTGACGGGAGGGAACGTCGAAAGTATGAGATACGCGT
TAGGTCAGATGGGGCGGGAGTGCGAGTTCTTCACGATGATGAGGCACCCC
ATCGATCGAGCGATCTCCGCATATACGCGTTAGGTCAGATGGGGCGGGAG
TGCGAGTTCTTCACGATGATGAGGCACCCCATCGATCGAGCGATCTCCGC
ATTCTTCTATTGCCCGCAAGATCATGACGTTCAGAACCGGCCCCCAGAGT
CTTCTATTGCCCGCAAGATCATGACGTTCAGAACCGGCCCCCAGAGTGGT
GCGGGTACTCTGACCACCCGAAGCCGGCGAAAGTGCGGCTGATTGGATTC
TTGAAGAACATGTGGGGAAACAAGGCCTTTCGTCAGTTTTCCTCCAGCTT
ACACTGTAGTCCGGGCCTTCCTTGTCCCGAGCAACAGTGGTGCGGGTACT
CTGACCACCCGAAGCCGGCGAAAGTGCGGCTGATTGGATTCTTGAAGAAC
ATGTGGGGAAACAAGGCCTTTCGTCAGTTTTCCTCCAGCTTACACTGTAG
TCCGGGCCTTCCTTGTCCCGAGCAACAGATCAAGAGAGCGTCCGTGTTGG
CACAAAACAAGGCCACGCTGAAGGAAGTGGAGATCAAGAGAGCGTCCGTG
TTGGCACAAAACAAGGCCACGCTGAAGGAAGTGGAGGTCGTTATGCAGAC
TTACACCGCAATGGGCATAATGGAATACTGGGACTTATCGATGCAGCTAT
TCGACGCAAAGGTCAAAAGCCCCGTTCGTGTCTGGAACGAGGAGAGGCAC
GCTAATCCAGGGGATCCATCCCCTCTACGGGACGAAGTCTACCGGTGGGC
GCACAGGAGTCCGGAGATCCACACGATCTTGTCGACCGACCTTCTCCTTT
ACACCTACGCCCTTTCCTTGTTTAAGCTGCAAACAAACGAAACGCTTGGA
ACCCAGTGGGATTAAGTCGTTATGCAGACTTACACCGCAATGGGCATAAT
GGAATACTGGGACTTATCGATGCAGCTATTCGACGCAAAGGTCAAAAGCC
CCGTTCGTGTCTGGAACGAGGAGAGGCACGCTAATCCAGGGGATCCATCC
CCTCTACGGGACGAAGTCTACCGGTGGGCGCACAGGAGTCCGGAGATCCA
CACGATCTTGTCGACCGACCTTCTCCTTTACACCTACGCCCTTTCCTTGT
TTAAGCTGCAAACAAACGAAACGCTTGGAACCCAGTGGGATTAA
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