mRNA_F-serratus_M_contig686.17927.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig686.17927.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI) HSP 1 Score: 215 bits (547), Expect = 2.570e-68 Identity = 98/151 (64.90%), Postives = 114/151 (75.50%), Query Frame = 1
Query: 7 FSGDGTYYGTT--SNGNCAISSPIPSMYDDMIPVALNSAQYSGSEMCGACIEGEGSGNGSGSDPITGLFKAYVMDKCPECSSGDLDFSMSGDGRWDISWKFVKCPGSSTPSFIFEGSHEYYWKIQPRGTKTPVAELTVDGVSGTRTDDNFF 453
FSGD TYYG T +GNCAI SP+P MYD MIPVALN QY+ S MCGACIEGEG G G G DP+ G FKAYV D+CPEC GDLDF+ GDGRWDISW FV C G S +F+FEGS+E+YWKIQPRG ++PV L ++G R++DNFF
Sbjct: 41 FSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFF 191
BLAST of mRNA_F-serratus_M_contig686.17927.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI) HSP 1 Score: 212 bits (540), Expect = 2.240e-66 Identity = 96/151 (63.58%), Postives = 113/151 (74.83%), Query Frame = 1
Query: 7 FSGDGTYYGTTSNGNCAISSPIPSMYDDMIPVALNSAQYSGSEMCGACIEGEGSGNGSGSDPITGLFKAYVMDKCPECSSGDLDFSMSGDGRWDISWKFVKCPGSSTPSFIFEGSHEYYWKIQPRGTKTPVAELTVDGVSGTRTDDNFFEI 459
+SG+GTYYG T+ G C+ +P MYD MIPVALN+ QY S MCGAC+EG SG+GSG++PI FKA++ DKCPEC GDLDFSMSGDGRWDI WKFV CPG T SF+ ++ YYWK+QPRGT TPV LTVDG S RT DN FE+
Sbjct: 108 YSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEET-SFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEV 257
BLAST of mRNA_F-serratus_M_contig686.17927.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI) HSP 1 Score: 207 bits (527), Expect = 4.740e-62 Identity = 96/152 (63.16%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 4 TFSGDGTYYGTTSNGNCAISSPIPSMYDDMIPVALNSAQYSGSEMCGACIEGEGSGNGSGSDPITGLFKAYVMDKCPECSSGDLDFSMSGDGRWDISWKFVKCPGSSTPSFIFEGSHEYYWKIQPRGTKTPVAELTVDGVSGTRTDDNFFEI 459
TF+G+GTYY TS GNC PS+YD M PVALN QY S MCGAC+EGEG+G GSGSDP+ G FK ++MDKCPECS GDLDF DGRWDI WKFV+CP SF E EYYWKIQPRGT TPV LT+ G + RTDDN FE+
Sbjct: 314 TFNGEGTYYTGTSAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFEL 464
BLAST of mRNA_F-serratus_M_contig686.17927.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR) HSP 1 Score: 200 bits (509), Expect = 1.100e-61 Identity = 90/149 (60.40%), Postives = 112/149 (75.17%), Query Frame = 1
Query: 7 FSGDGTYYGTTSNGNCAISSPIPSMYDDMIPVALNSAQYSGSEMCGACIEGEGSGNGSGSDPITGLFKAYVMDKCPECSSGDLDFSMSGDGRWDISWKFVKCPGSSTPSFIFEGSHEYYWKIQPRGTKTPVAELTVDGVSGTRTDDNFF 453
F G+GTYYG T+ GNCAI SP+PSMY+ M+PVA+N+AQY S CGAC++ G G GSG++PI G FKAYV D+CPEC GD+D S GDGRW + WKF+ CPG F+FEGS+ YY K+QPRG KTPV+ L+V G GT+T DNF+
Sbjct: 29 FHGEGTYYGYTTRGNCAIRSPMPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPGEFV-FFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFY 176
BLAST of mRNA_F-serratus_M_contig686.17927.1 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR) HSP 1 Score: 199 bits (505), Expect = 4.160e-61 Identity = 88/150 (58.67%), Postives = 111/150 (74.00%), Query Frame = 1
Query: 4 TFSGDGTYYGTTSNGNCAISSPIPSMYDDMIPVALNSAQYSGSEMCGACIEGEGSGNGSGSDPITGLFKAYVMDKCPECSSGDLDFSMSGDGRWDISWKFVKCPGSSTPSFIFEGSHEYYWKIQPRGTKTPVAELTVDGVSGTRTDDNFF 453
TF GDGTYYG T+ GNCAI SP+P MY M+PVA+N+AQY S+ CGAC+ G G GSG++P+ G FKAYV D+CPEC GD+D S SGDGRW + W+F+ CPG F+FEGS+ +Y K+QPRG KTPV +V+G GT+T DNF+
Sbjct: 23 TFFGDGTYYGYTTRGNCAIRSPLPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPGEWV-FFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFY 171
BLAST of mRNA_F-serratus_M_contig686.17927.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE) HSP 1 Score: 191 bits (484), Expect = 2.280e-55 Identity = 90/153 (58.82%), Postives = 104/153 (67.97%), Query Frame = 1
Query: 1 TTFSGDGTYYGTTSNGNCAISSPIPSMYDDMIPVALNSAQYSGSEMCGACIEGEGSGNGSGSDPITGLFKAYVMDKCPECSSGDLDFSMSGDGRWDISWKFVKCPGSSTPSFIFEGSHEYYWKIQPRGTKTPVAELTVDGVSGTRTDDNFFEI 459
TTF GDGTYY S GNC PS+Y M PVALN+AQY S MCG+C+EGEG+G G G +PI G FK ++MDKCPEC GDLDF DGRWDI W+FV CPG + E + YYWKIQPRGT TPV LT+ G + RTDDN FE+
Sbjct: 350 TTFEGDGTYYTGISAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGEEVSFKVVEMT-PYYWKIQPRGTATPVESLTIGGRAAARTDDNHFEL 500
BLAST of mRNA_F-serratus_M_contig686.17927.1 vs. uniprot
Match: A0A1X6NJE1_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJE1_PORUM) HSP 1 Score: 172 bits (437), Expect = 1.040e-51 Identity = 77/151 (50.99%), Postives = 107/151 (70.86%), Query Frame = 1
Query: 4 TFSGDGTYYGTTSNGNCAISSPIPSMYDDMIPVALNSAQYSGSEMCGACIEGEGSGNGSGSDPITGLFKAYVMDKCPECSSGDLDFSMSGDGRWDISWKFVKCP-GSSTPSFIFEGSHEYYWKIQPRGTKTPVAELTVDGVSGTRTDDNFF 453
T +G+GTY+G T+ GNCA+ P+P+ Y ++ VA+++A Y+GS CGAC+ GSG+G+G++PITG F AYVMD+CPEC++GDLD + GDGRW +SW V CP P F+ EGS+ +Y K+Q RG P A ++V G + RT DNFF
Sbjct: 47 TGAGEGTYFGPTTRGNCALD-PLPAQYGGLVGVAVSTADYAGSAACGACLRVTGSGDGAGANPITGTFSAYVMDRCPECAAGDLDLATPGDGRWAVSWTVVPCPTAGGAPEFLLEGSNPHYLKVQVRGLPAPAASVSVGGAACARTQDNFF 196
BLAST of mRNA_F-serratus_M_contig686.17927.1 vs. uniprot
Match: A0A7S4IRK7_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IRK7_9EUKA) HSP 1 Score: 142 bits (358), Expect = 4.630e-38 Identity = 73/158 (46.20%), Postives = 101/158 (63.92%), Query Frame = 1
Query: 10 SGDGTYYGTTSNGNCAIS---SPIPSMYDDMIPVALNSAQYSGSEMCGACIEGEGSGNGSGSDPITGLFKAYVMDKCPECSSGDLDFSMSGDGRWDISWKFVKCPGS-STPSFIFEGSHEYYWKIQPRGTKTPVAELTV---DG---VSGTRTDDNFF 453
SG+GTYYG +S+G+C + P+ + VA+NS QY GS CG CI+ G G GSG+DPI G F YV D CPEC+SGDLD + SGDGRW+I W V CPG+ ++ +GS++++ K+Q R + PV++L + DG ++ T T DNFF
Sbjct: 20 SGEGTYYGPSSSGSCTLDFNLPPVAQTSEIFSTVAMNSPQYYGSLTCGMCIQMTGEGVGSGADPIDGTFIVYVSDLCPECASGDLDVAQSGDGRWEIEWTAVDCPGNYGDLQYLGQGSNDFFLKVQVRNHRVPVSQLYLLDADGQSRITMTPTSDNFF 177
BLAST of mRNA_F-serratus_M_contig686.17927.1 vs. uniprot
Match: A0A2P6NBD6_9EUKA (Endochitinase-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBD6_9EUKA) HSP 1 Score: 136 bits (342), Expect = 3.460e-34 Identity = 75/164 (45.73%), Postives = 102/164 (62.20%), Query Frame = 1
Query: 4 TFSGDGTYYGTT-SNGNCAISSPIPSMYDDMIPV--ALNSAQYSGSEMCGACIEGEGSGNGSGSDPITGLFKAYVMDKCPECSSGDLDFSMSGDGRWDISWKFVKCP-GSSTPSFIFEGSHEYYWKIQPRGTKTPVAELTVDGVSGT------RTDDNFFEIPD 465
T +G TYYG + GNC I P+P I V A+ SA + GS CG+CI+ GSG G+GS+P+ G F A+V D+CP C G LDF+ +GDG WDISWK V CP G+S + F+GS+E+Y K+Q R +TP+ +++ + RT DNFFE+PD
Sbjct: 336 TQNGKATYYGDDGTGGNCQIY-PVPQNIKSNIDVSVAMVSAYWFGSAACGSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIYYAFQGSNEWYMKVQARNHRTPLNFISIQDPNTKQYRKMKRTGDNFFELPD 498
BLAST of mRNA_F-serratus_M_contig686.17927.1 vs. uniprot
Match: A0A2P6NBF0_9EUKA (MAP/microtubule affinity-regulating kinase 3-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBF0_9EUKA) HSP 1 Score: 136 bits (342), Expect = 3.550e-34 Identity = 75/164 (45.73%), Postives = 102/164 (62.20%), Query Frame = 1
Query: 4 TFSGDGTYYGTT-SNGNCAISSPIPSMYDDMIPV--ALNSAQYSGSEMCGACIEGEGSGNGSGSDPITGLFKAYVMDKCPECSSGDLDFSMSGDGRWDISWKFVKCP-GSSTPSFIFEGSHEYYWKIQPRGTKTPVAELTVDGVSGT------RTDDNFFEIPD 465
T +G TYYG + GNC I P+P I V A+ SA + GS CG+CI+ GSG G+GS+P+ G F A+V D+CP C G LDF+ +GDG WDISWK V CP G+S + F+GS+E+Y K+Q R +TP+ +++ + RT DNFFE+PD
Sbjct: 729 TQNGKATYYGDDGTGGNCQIY-PVPQNIKSNIDVSVAMVSAYWFGSAACGSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIYYAFQGSNEWYMKVQARNHRTPLNFISIQDPNTKQYRKMKRTGDNFFELPD 891 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig686.17927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig686.17927.1 >prot_F-serratus_M_contig686.17927.1 ID=prot_F-serratus_M_contig686.17927.1|Name=mRNA_F-serratus_M_contig686.17927.1|organism=Fucus serratus male|type=polypeptide|length=155bp TTFSGDGTYYGTTSNGNCAISSPIPSMYDDMIPVALNSAQYSGSEMCGACback to top mRNA from alignment at F-serratus_M_contig686:407134..408391- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig686.17927.1 ID=mRNA_F-serratus_M_contig686.17927.1|Name=mRNA_F-serratus_M_contig686.17927.1|organism=Fucus serratus male|type=mRNA|length=1258bp|location=Sequence derived from alignment at F-serratus_M_contig686:407134..408391- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig686:407134..408391- >mRNA_F-serratus_M_contig686.17927.1 ID=mRNA_F-serratus_M_contig686.17927.1|Name=mRNA_F-serratus_M_contig686.17927.1|organism=Fucus serratus male|type=CDS|length=930bp|location=Sequence derived from alignment at F-serratus_M_contig686:407134..408391- (Fucus serratus male)back to top |