mRNA_F-serratus_M_contig686.17925.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig686.17925.1
Unique NamemRNA_F-serratus_M_contig686.17925.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig686.17925.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE)

HSP 1 Score: 381 bits (979), Expect = 8.690e-126
Identity = 190/389 (48.84%), Postives = 239/389 (61.44%), Query Frame = 1 
Query:    1 PQLILYLQQQLCHEYCNVRGAFYMATQFGNECFCSTEEDLDYDRHKTGNCDMPCAGDESERCGGNYAFDLYKLEWPDTATDPEYMDCYADDEEERVMSNMHVSDIMTSSVCRDHCKDKNALYYATQYGNECWCGTSDVFADYERHGKGTCHMRCAGDTSASCGGRYAFSLYRF---------IDEDTESTQDLAPAPAXXXXXXXXXXXXXXXXXVSKTNVQIASSADSSAYPYDGSTFVGDGTYYGETSNGNCAMRSPIPSMYDGMIPVALNSAQYGGSEMCGACIEGRGSGNGAGSDPITGVFKAYVMDKCPECSVGDLDFSKTGDGRWDISWKFVKCPGSNRPSFIFEGSHSFYWKIQPRGTSTPVVELTVEGAPGTRTDDNFFEI 1140
            P ++  +  +LC++ C+  GAF+M TQ GNEC CS EEDLDY   ++G CD PCAGD +E CGG+   DLYKL   D     EY  C++D  E RVM +M V + MT+ +CRDHC+  +A+YYATQYGNEC+CG S    DYE HG GTCHM CAGD+ ++CGG +AFSL++F         + + +E   + AP P                   S +  +  +      Y   G+TF GDGTYY   S GNC      PS+Y GM PVALN+AQYG S MCG+C+EG G+G G G +PI G FK ++MDKCPEC  GDLDF    DGRWDI W+FV CPG    SF       +YWKIQPRGT+TPV  LT+ G    RTDDN FE+
Sbjct:  129 PLVLDAMTNELCYDRCHELGAFFMGTQKGNECRCSREEDLDYFSFESGVCDEPCAGDSTETCGGDLTLDLYKLTPADEPDHEEYEGCWSDLGESRVMQDMLVDESMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGPGTCHMHCAGDSGSACGGYWAFSLFKFGADGMPDPAVPDVSEPPSEPAPEPVVSTPAP------------SMSEAESKTPISGGVY---GTTFEGDGTYYTGISAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGEE-VSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFEL 500
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BLAST of mRNA_F-serratus_M_contig686.17925.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 1.300e-124
Identity = 207/404 (51.24%), Postives = 248/404 (61.39%), Query Frame = 1 
Query:    1 PQLILYLQQQLCHEYCNVRGAFYMATQFGNECFCSTEEDLDYDRHKTGNCDMPCAGDESERCGGNYAFDLYKLEWPDTATDPEYMDCYADDEEERVMSNMHVSDIMTSSVCRDHCKDKNALYYATQYGNECWCGTSDVFADYERHGKGTCHMRCAGDTSASCGGRYAFSLYRF---------IDEDTESTQDLAPAPAXXXXXXXXXXXXXXXXXVSKTNVQI---------------ASSADSSAYPYDGSTFVGDGTYYGETSNGNCAMRSPIPSMYDGMIPVALNSAQYGGSEMCGACIEGRGSGNGAGSDPITGVFKAYVMDKCPECSVGDLDFSKTGDGRWDISWKFVKCPGSNRPSFIFEGSHSFYWKIQPRGTSTPVVELTVEGAPGTRTDDNFFEI 1140
            P ++  +  ++C++ C+  G+F+M TQ GNEC CS EEDL Y     G CD+PCAGD  E CGG    DLYKL    T    EY+ C++D  E RVM +M V + MT+ +CRDHC+  +A+YYATQYGNEC+CG S    DYE HG GTCHM C GD+ ++CGG +AFSLY+F         + E T           XXXXXXXXXXXXXXXXX                           D S   Y G TF G+GTYY  TS GNC      PS+YDGM PVALN  QYG S MCGAC+EG G+G G+GSDP+ G FK ++MDKCPECS GDLDF    DGRWDI WKFV+CP     SF  E    +YWKIQPRGT+TPV  LT+ G    RTDDN FE+
Sbjct:   63 PLVMETMTNEMCYDRCHELGSFFMGTQKGNECRCSREEDLAYSAFDFGVCDIPCAGDSDETCGGQLTIDLYKLTAAQTPDHEEYVGCWSDANESRVMEDMLVDEGMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGLGTCHMHCGGDSGSACGGYWAFSLYQFGADGMPEPDVPESTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSGGGGGDVSGGEY-GITFNGEGTYYTGTSAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFEL 464
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BLAST of mRNA_F-serratus_M_contig686.17925.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 1.090e-65
Identity = 99/157 (63.06%), Postives = 113/157 (71.97%), Query Frame = 1 
Query:  670 PYDGSTFVGDGTYYGET--SNGNCAMRSPIPSMYDGMIPVALNSAQYGGSEMCGACIEGRGSGNGAGSDPITGVFKAYVMDKCPECSVGDLDFSKTGDGRWDISWKFVKCPGSNRPSFIFEGSHSFYWKIQPRGTSTPVVELTVEGAPGTRTDDNFF 1134
            PYD   F GD TYYG T   +GNCA+RSP+P MYDGMIPVALN  QY  S MCGACIEG G G G G DP+ G FKAYV D+CPEC  GDLDF+  GDGRWDISW FV C G +  +F+FEGS+ FYWKIQPRG  +PV  L + G    R++DNFF
Sbjct:   36 PYD-EQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFF 191
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BLAST of mRNA_F-serratus_M_contig686.17925.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 5.180e-63
Identity = 92/154 (59.74%), Postives = 114/154 (74.03%), Query Frame = 1 
Query:  679 GSTFVGDGTYYGETSNGNCAMRSPIPSMYDGMIPVALNSAQYGGSEMCGACIEGRGSGNGAGSDPITGVFKAYVMDKCPECSVGDLDFSKTGDGRWDISWKFVKCPGSNRPSFIFEGSHSFYWKIQPRGTSTPVVELTVEGAPGTRTDDNFFEI 1140
            G  + G+GTYYG T+ G C+    +P MYDGMIPVALN+ QYG S MCGAC+EG  SG+G+G++PI   FKA++ DKCPEC  GDLDFS +GDGRWDI WKFV CPG    SF+   ++ +YWK+QPRGT+TPVV LTV+G    RT DN FE+
Sbjct:  105 GEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEET-SFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEV 257
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BLAST of mRNA_F-serratus_M_contig686.17925.1 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR)

HSP 1 Score: 206 bits (525), Expect = 8.520e-61
Identity = 88/150 (58.67%), Postives = 112/150 (74.67%), Query Frame = 1 
Query:  685 TFVGDGTYYGETSNGNCAMRSPIPSMYDGMIPVALNSAQYGGSEMCGACIEGRGSGNGAGSDPITGVFKAYVMDKCPECSVGDLDFSKTGDGRWDISWKFVKCPGSNRPSFIFEGSHSFYWKIQPRGTSTPVVELTVEGAPGTRTDDNFF 1134
            TF GDGTYYG T+ GNCA+RSP+P MY GM+PVA+N+AQY  S+ CGAC+   G G G+G++P+ G FKAYV D+CPEC  GD+D SK+GDGRW + W+F+ CPG     F+FEGS+ FY K+QPRG  TPV   +V G  GT+T DNF+
Sbjct:   23 TFFGDGTYYGYTTRGNCAIRSPLPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPGE-WVFFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFY 171
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BLAST of mRNA_F-serratus_M_contig686.17925.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR)

HSP 1 Score: 202 bits (515), Expect = 2.810e-59
Identity = 89/149 (59.73%), Postives = 113/149 (75.84%), Query Frame = 1 
Query:  688 FVGDGTYYGETSNGNCAMRSPIPSMYDGMIPVALNSAQYGGSEMCGACIEGRGSGNGAGSDPITGVFKAYVMDKCPECSVGDLDFSKTGDGRWDISWKFVKCPGSNRPSFIFEGSHSFYWKIQPRGTSTPVVELTVEGAPGTRTDDNFF 1134
            F G+GTYYG T+ GNCA+RSP+PSMY+GM+PVA+N+AQY  S  CGAC++  G G G+G++PI G FKAYV D+CPEC  GD+D SK GDGRW + WKF+ CPG     F+FEGS+ +Y K+QPRG  TPV  L+V G  GT+T DNF+
Sbjct:   29 FHGEGTYYGYTTRGNCAIRSPMPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPGEF-VFFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFY 176
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BLAST of mRNA_F-serratus_M_contig686.17925.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 9.610e-59
Identity = 95/165 (57.58%), Postives = 126/165 (76.36%), Query Frame = 1 
Query:   28 QLCHEYCNVRGAFYMATQFGNECFCSTEEDLDYDRH-KTGNCDMPCAGDESERCGGNYAFDLYKLEWPDTATDPEYMDCYADDEEERVMSNMHVSDIMTSSVCRDHCKDKNALYYATQYGNECWCGTSDVFADYERHGKGTCHMRCAGDTSASCGGRYAFSLYRF 519
            +LC+E C+ +GA YMATQ+G EC+CS +  LDYDRH  TG CD PC GDESE CGG ++F+LY+L W     D EY+ CY D++ +RV+S+M  SD MT++VCR+HC DK+A YY TQ+ +ECWCGTSD  ADYERHG+G CHM C+GD + +CGG  A+SL+++
Sbjct: 1173 ELCYETCSTKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCRGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYTDNKGDRVLSDMISSDDMTAAVCREHCADKDAPYYGTQFSSECWCGTSDDDADYERHGEGVCHMACSGDGTVACGGYDAYSLFKY 1337
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BLAST of mRNA_F-serratus_M_contig686.17925.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 5.220e-58
Identity = 98/178 (55.06%), Postives = 129/178 (72.47%), Query Frame = 1 
Query:   28 QLCHEYCNVRGAFYMATQFGNECFCSTEEDLDYDRH-KTGNCDMPCAGDESERCGGNYAFDLYKLEWPDTATDPEYMDCYADDEEERVMSNMHVSDIMTSSVCRDHCKDKNALYYATQYGNECWCGTSDVFADYERHGKGTCHMRCAGDTSASCGGRYAFSLYRFIDEDTESTQDLAP 558
            +LC+E C+ +GA YMATQ+G EC+CS +  LDYDRH  TG CD PC GDESE CGG ++F+LY+L W     D EY+ CYAD + +RV+ +M  SD MT+ VCR+HC DK+A YY TQ+ +ECWCGTSD  ADYERHG+G CHM C+GD + +CGG  A+SL++   ++   T  +AP
Sbjct:  827 ELCYETCSAKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCIGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYADSKGDRVLFDMISSDNMTAGVCREHCADKDAPYYGTQFSSECWCGTSDDEADYERHGEGVCHMACSGDGTVACGGYDAYSLFKH--DNGGKTPTMAP 1002
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BLAST of mRNA_F-serratus_M_contig686.17925.1 vs. uniprot
Match: A0A1X6NJE1_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJE1_PORUM)

HSP 1 Score: 181 bits (459), Expect = 7.460e-52
Identity = 84/168 (50.00%), Postives = 110/168 (65.48%), Query Frame = 1 
Query:  634 VQIASSADSSAYPYDGSTFVGDGTYYGETSNGNCAMRSPIPSMYDGMIPVALNSAQYGGSEMCGACIEGRGSGNGAGSDPITGVFKAYVMDKCPECSVGDLDFSKTGDGRWDISWKFVKCP-GSNRPSFIFEGSHSFYWKIQPRGTSTPVVELTVEGAPGTRTDDNFF 1134
            V  A++A   A    G T  G+GTY+G T+ GNCA+  P+P+ Y G++ VA+++A Y GS  CGAC+   GSG+GAG++PITG F AYVMD+CPEC+ GDLD +  GDGRW +SW  V CP     P F+ EGS+  Y K+Q RG   P   ++V GA   RT DNFF
Sbjct:   30 VAAAAAAPLGAALRAGQTGAGEGTYFGPTTRGNCAL-DPLPAQYGGLVGVAVSTADYAGSAACGACLRVTGSGDGAGANPITGTFSAYVMDRCPECAAGDLDLATPGDGRWAVSWTVVPCPTAGGAPEFLLEGSNPHYLKVQVRGLPAPAASVSVGGAACARTQDNFF 196
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BLAST of mRNA_F-serratus_M_contig686.17925.1 vs. uniprot
Match: D7FXK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK6_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 5.250e-48
Identity = 84/178 (47.19%), Postives = 117/178 (65.73%), Query Frame = 1 
Query:   31 LCHEYCNVRGAFYMATQFGNECFCSTEEDLDYDRHKTGN------CDMPCAGDESERCGGNYAFDLYKLEWPDTATDPEYMDCYADDEEERVMSN-MHVSDIMTSSVCRDHCKDKNALYYATQYGNECWCGTSDVFADYERHGKGTCHMRCAGDTSASCGGRYAFSLYRFIDEDTEST 543
            +C E+C  R A YMA Q+G EC+CS   +LDY RH   +      CD+ C G ++E CGG YAFDLYKL+ P  +   EY+ C+ADD+E+R ++N +   D MT  VCR +C+   + +YATQYG+ECWCG +D   +Y+RHG G C   C GD + +CGG YAFSL+ ++D+D + T
Sbjct:  342 MCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEYLDDDDDET 519
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig686.17925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBW3_9PHAE8.690e-12648.84Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LGP4_ECTSI1.300e-12451.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHU1_ECTSI1.090e-6563.06Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879... [more]
D8LRN1_ECTSI5.180e-6359.74Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
F2Z7J0_9FLOR8.520e-6158.67Uncharacterized protein n=1 Tax=Gracilariopsis and... [more]
A0A2V3ISL2_9FLOR2.810e-5959.73Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=... [more]
D7FRE8_ECTSI9.610e-5957.58EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JJ37_9PHAE5.220e-5855.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1X6NJE1_PORUM7.460e-5250.00Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
D7FXK6_ECTSI5.250e-4847.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig686contigF-serratus_M_contig686:268722..271963 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score378.6
Seed ortholog evalue3.3e-102
Seed eggNOG ortholog2880.D8LGP4
KEGG koko:K01315
KEGG Pathwayko04080,ko04610,ko05150,ko05164,map04080,map04610,map05150,map05164
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC3.4.21.7
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko04147,ko04516
Exons7
Model size1140
Cds size1140
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932098.2744741-CDS-F-serratus_M_contig686:268721..2688951622932098.2744741-CDS-F-serratus_M_contig686:268721..268895Fucus serratus maleCDSF-serratus_M_contig686 268722..268895 +
1690964145.9485567-CDS-F-serratus_M_contig686:268721..2688951690964145.9485567-CDS-F-serratus_M_contig686:268721..268895Fucus serratus maleCDSF-serratus_M_contig686 268722..268895 +
1622932098.2949235-CDS-F-serratus_M_contig686:269544..2696221622932098.2949235-CDS-F-serratus_M_contig686:269544..269622Fucus serratus maleCDSF-serratus_M_contig686 269545..269622 +
1690964145.9631143-CDS-F-serratus_M_contig686:269544..2696221690964145.9631143-CDS-F-serratus_M_contig686:269544..269622Fucus serratus maleCDSF-serratus_M_contig686 269545..269622 +
1622932098.3158636-CDS-F-serratus_M_contig686:269834..2699601622932098.3158636-CDS-F-serratus_M_contig686:269834..269960Fucus serratus maleCDSF-serratus_M_contig686 269835..269960 +
1690964145.97698-CDS-F-serratus_M_contig686:269834..2699601690964145.97698-CDS-F-serratus_M_contig686:269834..269960Fucus serratus maleCDSF-serratus_M_contig686 269835..269960 +
1622932098.3540215-CDS-F-serratus_M_contig686:270151..2702601622932098.3540215-CDS-F-serratus_M_contig686:270151..270260Fucus serratus maleCDSF-serratus_M_contig686 270152..270260 +
1690964145.997303-CDS-F-serratus_M_contig686:270151..2702601690964145.997303-CDS-F-serratus_M_contig686:270151..270260Fucus serratus maleCDSF-serratus_M_contig686 270152..270260 +
1622932098.3734-CDS-F-serratus_M_contig686:270487..2707811622932098.3734-CDS-F-serratus_M_contig686:270487..270781Fucus serratus maleCDSF-serratus_M_contig686 270488..270781 +
1690964146.012495-CDS-F-serratus_M_contig686:270487..2707811690964146.012495-CDS-F-serratus_M_contig686:270487..270781Fucus serratus maleCDSF-serratus_M_contig686 270488..270781 +
1622932098.3957148-CDS-F-serratus_M_contig686:271196..2713061622932098.3957148-CDS-F-serratus_M_contig686:271196..271306Fucus serratus maleCDSF-serratus_M_contig686 271197..271306 +
1690964146.025904-CDS-F-serratus_M_contig686:271196..2713061690964146.025904-CDS-F-serratus_M_contig686:271196..271306Fucus serratus maleCDSF-serratus_M_contig686 271197..271306 +
1622932098.4147189-CDS-F-serratus_M_contig686:271714..2719631622932098.4147189-CDS-F-serratus_M_contig686:271714..271963Fucus serratus maleCDSF-serratus_M_contig686 271715..271963 +
1690964146.0412457-CDS-F-serratus_M_contig686:271714..2719631690964146.0412457-CDS-F-serratus_M_contig686:271714..271963Fucus serratus maleCDSF-serratus_M_contig686 271715..271963 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig686.17925.1prot_F-serratus_M_contig686.17925.1Fucus serratus malepolypeptideF-serratus_M_contig686 268722..271963 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig686.17925.1

>prot_F-serratus_M_contig686.17925.1 ID=prot_F-serratus_M_contig686.17925.1|Name=mRNA_F-serratus_M_contig686.17925.1|organism=Fucus serratus male|type=polypeptide|length=380bp
PQLILYLQQQLCHEYCNVRGAFYMATQFGNECFCSTEEDLDYDRHKTGNC
DMPCAGDESERCGGNYAFDLYKLEWPDTATDPEYMDCYADDEEERVMSNM
HVSDIMTSSVCRDHCKDKNALYYATQYGNECWCGTSDVFADYERHGKGTC
HMRCAGDTSASCGGRYAFSLYRFIDEDTESTQDLAPAPAPSAEPTPEPAP
KPAAEPVSKTNVQIASSADSSAYPYDGSTFVGDGTYYGETSNGNCAMRSP
IPSMYDGMIPVALNSAQYGGSEMCGACIEGRGSGNGAGSDPITGVFKAYV
MDKCPECSVGDLDFSKTGDGRWDISWKFVKCPGSNRPSFIFEGSHSFYWK
IQPRGTSTPVVELTVEGAPGTRTDDNFFEI
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mRNA from alignment at F-serratus_M_contig686:268722..271963+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig686.17925.1 ID=mRNA_F-serratus_M_contig686.17925.1|Name=mRNA_F-serratus_M_contig686.17925.1|organism=Fucus serratus male|type=mRNA|length=3242bp|location=Sequence derived from alignment at F-serratus_M_contig686:268722..271963+ (Fucus serratus male)
CCACAACTTATCTTGTACTTACAACAACAGCTATGCCACGAGTACTGCAA
CGTCCGAGGGGCTTTCTACATGGCGACACAGTTTGGAAACGAATGTTTCT
GCAGCACGGAGGAGGATCTTGACTATGACCGTCACAAAACTGGAAACTGC
GACATGCCCTGTGCAGGGGACGAGGTTAATTGGCGTTTCCCCTCAGGGTC
TACGATTAAAAATTTGACGGTTAGATTTATATCCACCAGTCAGTGTAGCG
GCGACAAGATACAGATACCATCAAAGATACGACGGATCGGGCGGCAAGCA
GAGAACGGAGATCGTATCTTATTTCCGCCTGCATCTTCTTTATGCTCAAA
CGAAGATCTGTATTCGACTGGCATTGAAATGCAAGCCGTGGCTAATCTAT
CCCGAATCCAAAAAATTATATGTTTATGCTCTAAGACATTCCATTCCATC
GAAGCCGATCCTTGGCCACCTTAACCTTCACCCTGGGATCAGCTCGTGCC
ACCCGTGAGTGTTTCAACGATTGGGAGGGGCGGGGATACGACTATTCCGT
CCTTGGGGAGGTCACCAAAACAACCCCTTCCAGGGATATGGCTAAATGAT
CCCCTACATGGTCGGCAAACTTGCCCTGAATTCAACTCCTTTCACCAGGG
CGTCGGTCAAATAAGTTCCCGGGTGGAAGGGCTATTTTTGCGCCGCCCCC
TCCCATAAACGGGGACAAGTTTGTGACATCTCCGTCGCCCCCAATCGTTG
AACGACTCCCGCCCCTATCGTATTCGGCTCATCTATCCCCTTCCTTGCCT
TGATTATCCTCGCGGAGTCGCAGTCCGAGCGGTGCGGTGGTAACTACGCC
TTCGACCTATATAAGCTTGAGTGGCCGGACACAGCAACGGACCCTGAATA
CGTGAGAACAGCGATAATAGCCGTCCGTGAGGGTAGGCATTGACAACCTG
TTTGCATAACCTTTCGAAATGGCATATATCTTGGGTGAAATAGATGTTGG
ATATGCTCAAGCATGGCCCAGATGAGTACGAAATATTCGAGGCAGGGGAC
TTTTTACAAACGCCCCATGTCATATGTTTGTCCGAACGTGCGACTTCACA
TTATCAATGACAGATGGATTGCTACGCCGACGATGAAGAAGAGAGGGTAA
TGTCCAACATGCACGTTAGCGACATCATGACTTCCAGCGTGTGCCGTGAC
CACTGCAAGGACAAGAATGCCTTGTATTACGCCACTCAGGTACAGTAAAA
AAAAGAAATATTGGATCTACTCGTATTAGACCTATTTATAGTTTTTCAGC
ACGTTTTTCAAATCGTGAGAGAGGGGCGAACTTGACAATCCAATTCACAG
GGCCCGGTTCAAGTTTTTGCGCGATCTATCCTTTTACTTTTGTCGTTTCA
TGGTGTCTTATGTGACAACTCAAACCTCAGTACGGTAACGAATGCTGGTG
CGGAACTTCGGACGTTTTCGCCGACTACGAAAGGCACGGCAAAGGAACTT
GTCACATGCGATGTGCAGGCGACACGTCAGCTTCATGCGGTGAGTTCAGC
TATATGTTTCCTCTCTTGTTTTGCGTCTACCCCTCTAAGAGATAACTATG
CTCTTCATTTCATTCAACAACCTAGTCTCGCATATTTCACTCGACAGTCA
CACATCATGTCCCCGACGGATGTACACGTGGCACGCATATATACCATGAA
ATATATCCCTCCGCGTATGCTGTAGCGTGTCAATCCTCACTTCCTATTTC
ACGCCTCTGACGTAAGGTGGACGCTACGCCTTCAGTCTTTATCGCTTCAT
TGACGAAGACACTGAGTCGACACAGGACCTGGCACCTGCCCCGGCGCCAT
CCGCGGAGCCTACCCCTGAACCTGCCCCTAAACCTGCCGCGGAGCCTGTT
TCTAAGACTAACGTGCAAATCGCGTCATCAGCCGATAGCTCGGCGTACCC
TTACGACGGTTCTACCTTCGTCGGTGATGGTACCTACTACGGGGAGACCT
CAAACGGCAATTGCGCCATGCGCTCACCGATCCCTAGTATGTACGACGGC
ATGATTCCAGGTAAGCGATTCTCAAGCGTGTGCTGGCCCGTTTTCTGGAA
GGAAGAGATGTGAATGCATGACGAAAATTTCACGATGACTCGTCGGGGTG
TTGTCGTTACACAGGTTGTCCTACCTGAAGGACTTCCTCCTTAAGACCAG
ATCCTACCTGAAGGACTTCCTCCTTAAGAACCTGAGTTTAACACGGCGTC
TAATAGTCATTTTACTTCCACGTGGCTATGAAGTCCTTACACCAGCCAGC
CTATTCAGGCGGGGATATACGATTACTTTACGCGAAGCCAACCTAAATGC
TTCTGTTAGGAAGTCTCTTCCTGATTAGCAACGGCAGCGCCCACCACCTT
GCGTTACGCTATTGTTATTTCCCTCTTTCTCCTTCCGCATCACGGGACAC
GTTTGCTGTAACGATGGTCTTACAGTTGCGCTCAACTCCGCCCAGTACGG
TGGCTCGGAGATGTGCGGAGCGTGCATCGAAGGTCGGGGGTCGGGAAATG
GCGCAGGCAGCGATCCTATCACTGGAGTATTTAAGGTGCGTCATGAAAGC
CTCCTTGAAGTATGATGCGATTCAGGGGGCGCTAGGCCTTTTCCTTGGCC
TCAGGAAGACGAGGCAAGGCAATGCCGATCGGTCTGTCTGCTTATCTGTC
CGACTAACTGAATGGATGCCGCTTCCTGGAGCTTTGTGGTGTCTACGGTG
CCTTCCCAACACCCCAGCCCAGTACTCCTCAGTGCGAGTTGGAGCATTTC
AAAAATAATGATGTATGGTTTGGACGTTTTTGTTTTTTTTAACCGTAACC
TGTAGGACACCCCGAACGCAGAGATGACCCCTTGCCCCTGACGAATAGAA
CGCAACACATTGTTTCTTAGTCTGGCTCGGCTGTGTTGGTGCGAACGCGA
TTTCTCTTGACTACCATATATTGCGGGACGACTCCTATTTTAGGCGTACG
TGATGGATAAGTGTCCCGAATGCTCGGTTGGTGACCTCGACTTCTCCAAG
ACTGGTGACGGCCGCTGGGATATTTCCTGGAAATTTGTCAAGTGCCCTGG
CTCCAATCGTCCGAGCTTCATCTTCGAGGGCAGCCACAGCTTCTACTGGA
AGATCCAGCCTCGTGGGACCAGCACACCCGTAGTGGAGCTGACAGTGGAG
GGTGCGCCGGGGACCAGAACGGACGACAACTTCTTTGAAATC
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Coding sequence (CDS) from alignment at F-serratus_M_contig686:268722..271963+

>mRNA_F-serratus_M_contig686.17925.1 ID=mRNA_F-serratus_M_contig686.17925.1|Name=mRNA_F-serratus_M_contig686.17925.1|organism=Fucus serratus male|type=CDS|length=2280bp|location=Sequence derived from alignment at F-serratus_M_contig686:268722..271963+ (Fucus serratus male)
CCACAACTTATCTTGTACTTACAACAACAGCTATGCCACGAGTACTGCAA
CGTCCGAGGGGCTTTCTACATGGCGACACAGTTTGGAAACGAATGTTTCT
GCAGCACGGAGGAGGATCTTGACTATGACCGTCACAAAACTGGAAACTGC
GACATGCCCTGTGCAGGGGACGAGCCACAACTTATCTTGTACTTACAACA
ACAGCTATGCCACGAGTACTGCAACGTCCGAGGGGCTTTCTACATGGCGA
CACAGTTTGGAAACGAATGTTTCTGCAGCACGGAGGAGGATCTTGACTAT
GACCGTCACAAAACTGGAAACTGCGACATGCCCTGTGCAGGGGACGAGTC
CGAGCGGTGCGGTGGTAACTACGCCTTCGACCTATATAAGCTTGAGTGGC
CGGACACAGCAACGGACCCTGAATACTCCGAGCGGTGCGGTGGTAACTAC
GCCTTCGACCTATATAAGCTTGAGTGGCCGGACACAGCAACGGACCCTGA
ATACATGGATTGCTACGCCGACGATGAAGAAGAGAGGGTAATGTCCAACA
TGCACGTTAGCGACATCATGACTTCCAGCGTGTGCCGTGACCACTGCAAG
GACAAGAATGCCTTGTATTACGCCACTCAGATGGATTGCTACGCCGACGA
TGAAGAAGAGAGGGTAATGTCCAACATGCACGTTAGCGACATCATGACTT
CCAGCGTGTGCCGTGACCACTGCAAGGACAAGAATGCCTTGTATTACGCC
ACTCAGTACGGTAACGAATGCTGGTGCGGAACTTCGGACGTTTTCGCCGA
CTACGAAAGGCACGGCAAAGGAACTTGTCACATGCGATGTGCAGGCGACA
CGTCAGCTTCATGCGTACGGTAACGAATGCTGGTGCGGAACTTCGGACGT
TTTCGCCGACTACGAAAGGCACGGCAAAGGAACTTGTCACATGCGATGTG
CAGGCGACACGTCAGCTTCATGCGGTGGACGCTACGCCTTCAGTCTTTAT
CGCTTCATTGACGAAGACACTGAGTCGACACAGGACCTGGCACCTGCCCC
GGCGCCATCCGCGGAGCCTACCCCTGAACCTGCCCCTAAACCTGCCGCGG
AGCCTGTTTCTAAGACTAACGTGCAAATCGCGTCATCAGCCGATAGCTCG
GCGTACCCTTACGACGGTTCTACCTTCGTCGGTGATGGTACCTACTACGG
GGAGACCTCAAACGGCAATTGCGCCATGCGCTCACCGATCCCTAGTATGT
ACGACGGCATGATTCCAGGTGGACGCTACGCCTTCAGTCTTTATCGCTTC
ATTGACGAAGACACTGAGTCGACACAGGACCTGGCACCTGCCCCGGCGCC
ATCCGCGGAGCCTACCCCTGAACCTGCCCCTAAACCTGCCGCGGAGCCTG
TTTCTAAGACTAACGTGCAAATCGCGTCATCAGCCGATAGCTCGGCGTAC
CCTTACGACGGTTCTACCTTCGTCGGTGATGGTACCTACTACGGGGAGAC
CTCAAACGGCAATTGCGCCATGCGCTCACCGATCCCTAGTATGTACGACG
GCATGATTCCAGTTGCGCTCAACTCCGCCCAGTACGGTGGCTCGGAGATG
TGCGGAGCGTGCATCGAAGGTCGGGGGTCGGGAAATGGCGCAGGCAGCGA
TCCTATCACTGGAGTATTTAAGTTGCGCTCAACTCCGCCCAGTACGGTGG
CTCGGAGATGTGCGGAGCGTGCATCGAAGGTCGGGGGTCGGGAAATGGCG
CAGGCAGCGATCCTATCACTGGAGTATTTAAGGCGTACGTGATGGATAAG
TGTCCCGAATGCTCGGTTGGTGACCTCGACTTCTCCAAGACTGGTGACGG
CCGCTGGGATATTTCCTGGAAATTTGTCAAGTGCCCTGGCTCCAATCGTC
CGAGCTTCATCTTCGAGGGCAGCCACAGCTTCTACTGGAAGATCCAGCCT
CGTGGGACCAGCACACCCGTAGTGGAGCTGACAGTGGAGGGTGCGCCGGG
GACCAGAACGGACGACAACTTCTTTGAAATCGCGTACGTGATGGATAAGT
GTCCCGAATGCTCGGTTGGTGACCTCGACTTCTCCAAGACTGGTGACGGC
CGCTGGGATATTTCCTGGAAATTTGTCAAGTGCCCTGGCTCCAATCGTCC
GAGCTTCATCTTCGAGGGCAGCCACAGCTTCTACTGGAAGATCCAGCCTC
GTGGGACCAGCACACCCGTAGTGGAGCTGACAGTGGAGGGTGCGCCGGGG
ACCAGAACGGACGACAACTTCTTTGAAATC
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