mRNA_F-serratus_M_contig6854.17924.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6854.17924.1
Unique NamemRNA_F-serratus_M_contig6854.17924.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig6854.17924.1 vs. uniprot
Match: D7FKX1_ECTSI (MTS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKX1_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 6.070e-17
Identity = 36/44 (81.82%), Postives = 41/44 (93.18%), Query Frame = 1 
Query:    4 QHLLKKADQWGVDVAVLAQLCFDIPATYKFHKRDSVDVEVDLIR 135
            +HLLKKA++WGVD+ VLAQL FDIPATYKFHKR S+DVEVDLIR
Sbjct:  161 KHLLKKAEEWGVDITVLAQLRFDIPATYKFHKRRSMDVEVDLIR 204
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BLAST of mRNA_F-serratus_M_contig6854.17924.1 vs. uniprot
Match: A7RZY5_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RZY5_NEMVE)

HSP 1 Score: 68.9 bits (167), Expect = 2.460e-14
Identity = 29/44 (65.91%), Postives = 38/44 (86.36%), Query Frame = 1 
Query:    7 HLLKKADQWGVDVAVLAQLCFDIPATYKFHKRDSVDVEVDLIRF 138
            H+ KKA +WGV++ VLAQL +D+P +YKFHK+ SVD+EVDLIRF
Sbjct:   29 HITKKATEWGVEMEVLAQLRYDLPKSYKFHKKASVDIEVDLIRF 72
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BLAST of mRNA_F-serratus_M_contig6854.17924.1 vs. uniprot
Match: A0A2I0UTQ8_LIMLA (Methyltransferase-like protein 5 isoform x2 n=1 Tax=Limosa lapponica baueri TaxID=1758121 RepID=A0A2I0UTQ8_LIMLA)

HSP 1 Score: 67.8 bits (164), Expect = 6.530e-14
Identity = 28/45 (62.22%), Postives = 38/45 (84.44%), Query Frame = 1 
Query:    4 QHLLKKADQWGVDVAVLAQLCFDIPATYKFHKRDSVDVEVDLIRF 138
            QH+ KKAD+W V + V+A+L +D+PA+YKFHK+ SVD+EVD IRF
Sbjct:   21 QHIQKKADEWEVKMEVIAELRYDLPASYKFHKKKSVDIEVDFIRF 65
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BLAST of mRNA_F-serratus_M_contig6854.17924.1 vs. uniprot
Match: A0A4P9XQ30_9FUNG (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XQ30_9FUNG)

HSP 1 Score: 70.9 bits (172), Expect = 8.240e-14
Identity = 28/45 (62.22%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:    4 QHLLKKADQWGVDVAVLAQLCFDIPATYKFHKRDSVDVEVDLIRF 138
            +H+LKKA++WGV+  VLA++ F++PA YKFHK+ SVD+EVDL+RF
Sbjct:  160 EHILKKAEEWGVECKVLAEMKFEVPAMYKFHKKKSVDIEVDLLRF 204
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BLAST of mRNA_F-serratus_M_contig6854.17924.1 vs. uniprot
Match: A0A7L2USQ3_BALRX (METL5 protein (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7L2USQ3_BALRX)

HSP 1 Score: 70.9 bits (172), Expect = 8.930e-14
Identity = 29/45 (64.44%), Postives = 39/45 (86.67%), Query Frame = 1 
Query:    4 QHLLKKADQWGVDVAVLAQLCFDIPATYKFHKRDSVDVEVDLIRF 138
            QH+ KKAD+WGV + V+A+L +D+PA+YKFHK+ SVD+EVD IRF
Sbjct:  163 QHIQKKADEWGVKMEVIAELRYDLPASYKFHKKKSVDIEVDFIRF 207
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BLAST of mRNA_F-serratus_M_contig6854.17924.1 vs. uniprot
Match: A0A7S0CVM8_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CVM8_9EUKA)

HSP 1 Score: 70.1 bits (170), Expect = 1.140e-13
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 1 
Query:    4 QHLLKKADQWGVDVAVLAQLCFDIPATYKFHKRDSVDVEVDLIR 135
            +H+LKKA +WGVDV V+A+L FDIP  YKFH++ SVD+EVDLIR
Sbjct:   68 KHILKKASEWGVDVKVIAELRFDIPNMYKFHRKKSVDIEVDLIR 111
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BLAST of mRNA_F-serratus_M_contig6854.17924.1 vs. uniprot
Match: A0A6L5CL99_9INSE (MTS domain-containing protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CL99_9INSE)

HSP 1 Score: 70.5 bits (171), Expect = 1.350e-13
Identity = 29/45 (64.44%), Postives = 38/45 (84.44%), Query Frame = 1 
Query:    4 QHLLKKADQWGVDVAVLAQLCFDIPATYKFHKRDSVDVEVDLIRF 138
            QH+L KA QWGV+  V+A+L +D+PATY+FHK+ SVD+EVD IRF
Sbjct:  162 QHMLTKAKQWGVEAKVVAELRYDLPATYRFHKKQSVDIEVDFIRF 206
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BLAST of mRNA_F-serratus_M_contig6854.17924.1 vs. uniprot
Match: A0A674JDG0_TERCA (Methyltransferase like 5 n=1 Tax=Terrapene carolina triunguis TaxID=2587831 RepID=A0A674JDG0_TERCA)

HSP 1 Score: 68.2 bits (165), Expect = 1.350e-13
Identity = 28/45 (62.22%), Postives = 39/45 (86.67%), Query Frame = 1 
Query:    4 QHLLKKADQWGVDVAVLAQLCFDIPATYKFHKRDSVDVEVDLIRF 138
            +H+ KKAD+W V + V+A+L +D+PA+YKFHK+ SVD+EVDLIRF
Sbjct:   64 KHIQKKADEWKVKMEVIAELRYDLPASYKFHKKSSVDIEVDLIRF 108
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BLAST of mRNA_F-serratus_M_contig6854.17924.1 vs. uniprot
Match: A0A670HVC5_PODMU (Methyltransferase like 5 n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670HVC5_PODMU)

HSP 1 Score: 67.8 bits (164), Expect = 1.740e-13
Identity = 28/45 (62.22%), Postives = 38/45 (84.44%), Query Frame = 1 
Query:    4 QHLLKKADQWGVDVAVLAQLCFDIPATYKFHKRDSVDVEVDLIRF 138
            QH+ KKAD+W V + VLA+L +D+PA++KFHK+ SVD+EVD IRF
Sbjct:   64 QHIQKKADEWNVKMEVLAELRYDLPASFKFHKKKSVDIEVDFIRF 108
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BLAST of mRNA_F-serratus_M_contig6854.17924.1 vs. uniprot
Match: A0A851F0M4_PITSO (METL5 protein (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A851F0M4_PITSO)

HSP 1 Score: 70.1 bits (170), Expect = 1.760e-13
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 1 
Query:    4 QHLLKKADQWGVDVAVLAQLCFDIPATYKFHKRDSVDVEVDLIRF 138
            QH+ KKAD+W V + VLA+L FD+PA+YKFHK+ SVDVEVD IRF
Sbjct:  163 QHIQKKADEWEVKMEVLAELRFDLPASYKFHKKKSVDVEVDFIRF 207
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6854.17924.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKX1_ECTSI6.070e-1781.82MTS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A7RZY5_NEMVE2.460e-1465.91Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]
A0A2I0UTQ8_LIMLA6.530e-1462.22Methyltransferase-like protein 5 isoform x2 n=1 Ta... [more]
A0A4P9XQ30_9FUNG8.240e-1462.22S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7L2USQ3_BALRX8.930e-1464.44METL5 protein (Fragment) n=4 Tax=Neognathae TaxID=... [more]
A0A7S0CVM8_9EUKA1.140e-1368.18Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A6L5CL99_9INSE1.350e-1364.44MTS domain-containing protein n=1 Tax=Ephemera dan... [more]
A0A674JDG0_TERCA1.350e-1362.22Methyltransferase like 5 n=1 Tax=Terrapene carolin... [more]
A0A670HVC5_PODMU1.740e-1362.22Methyltransferase like 5 n=1 Tax=Podarcis muralis ... [more]
A0A851F0M4_PITSO1.760e-1368.89METL5 protein (Fragment) n=2 Tax=Passeriformes Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6854contigF-serratus_M_contig6854:4763..4900 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score81.6
Seed ortholog evalue1e-13
Seed eggNOG ortholog2880.D7FKX1
Preferred nameMETTL5
KEGG koko:K07579
Hectar predicted targeting categoryno signal peptide or anchor
EggNOG free text desc.DNA repair
EggNOG OGsCOG2263@1,KOG3420@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size138
Cds size138
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932098.2252605-CDS-F-serratus_M_contig6854:4762..49001622932098.2252605-CDS-F-serratus_M_contig6854:4762..4900Fucus serratus maleCDSF-serratus_M_contig6854 4763..4900 +
1690964145.9330006-CDS-F-serratus_M_contig6854:4762..49001690964145.9330006-CDS-F-serratus_M_contig6854:4762..4900Fucus serratus maleCDSF-serratus_M_contig6854 4763..4900 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6854.17924.1prot_F-serratus_M_contig6854.17924.1Fucus serratus malepolypeptideF-serratus_M_contig6854 4763..4900 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6854.17924.1

>prot_F-serratus_M_contig6854.17924.1 ID=prot_F-serratus_M_contig6854.17924.1|Name=mRNA_F-serratus_M_contig6854.17924.1|organism=Fucus serratus male|type=polypeptide|length=46bp
LQHLLKKADQWGVDVAVLAQLCFDIPATYKFHKRDSVDVEVDLIRF
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mRNA from alignment at F-serratus_M_contig6854:4763..4900+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6854.17924.1 ID=mRNA_F-serratus_M_contig6854.17924.1|Name=mRNA_F-serratus_M_contig6854.17924.1|organism=Fucus serratus male|type=mRNA|length=138bp|location=Sequence derived from alignment at F-serratus_M_contig6854:4763..4900+ (Fucus serratus male)
CTGCAGCACCTCCTGAAGAAGGCCGACCAATGGGGAGTCGATGTCGCCGT
GCTGGCGCAGCTTTGCTTTGACATTCCTGCCACTTACAAGTTCCATAAGC
GGGACTCTGTGGATGTCGAGGTTGATTTGATCCGTTTC
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Coding sequence (CDS) from alignment at F-serratus_M_contig6854:4763..4900+

>mRNA_F-serratus_M_contig6854.17924.1 ID=mRNA_F-serratus_M_contig6854.17924.1|Name=mRNA_F-serratus_M_contig6854.17924.1|organism=Fucus serratus male|type=CDS|length=276bp|location=Sequence derived from alignment at F-serratus_M_contig6854:4763..4900+ (Fucus serratus male)
CTGCAGCACCTCCTGAAGAAGGCCGACCAATGGGGAGTCGATGTCGCCGT
GCTGGCGCAGCTTTGCTTTGACATTCCTGCCACTTACAAGTTCCATAAGC
GGGACTCTGTGGATGTCGAGGTTGATTTGATCCGTTTCCTGCAGCACCTC
CTGAAGAAGGCCGACCAATGGGGAGTCGATGTCGCCGTGCTGGCGCAGCT
TTGCTTTGACATTCCTGCCACTTACAAGTTCCATAAGCGGGACTCTGTGG
ATGTCGAGGTTGATTTGATCCGTTTC
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