mRNA_F-serratus_M_contig685.17916.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig685.17916.1 vs. uniprot
Match: A0A6H5LEQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEQ8_9PHAE) HSP 1 Score: 215 bits (548), Expect = 2.690e-60 Identity = 119/256 (46.48%), Postives = 167/256 (65.23%), Query Frame = 1
Query: 142 SAAKTDWGRINVIAFLVNFLVVALGRLGWMGKINREVSDSHPTLLTPSGWSMSIWPVIFGAEALLMFW----QSRAAKGQVETVSPWFAIACIFQALWSVTFARELLTASAVLLPLIAICLTVAVWQLSHLKAKGNASLLSLDYWALHFPIGLHAGWTTAASFVMVNMALEAQ-PLETRVAALFVAIIVAPLAALLVALVFDDQAYLCAVAWALAAIADKSDFRRSTLPSAVADGVNRALSVLWVTLLVFGALVIL 894
S ++ W +NV+A+L+N +VV GW G N EVSD +PT +TP+GW+ SIW VIF EA+ + W +R ++ E V WFAIAC+ QA WS+ FA+ELL SA+LL LI + LT+AV LS ++ + +L +L +W ++FPIGLH GWT AA+ V +N+ALE + + +AAL ++++ A L A ++LVF +Q YL AVAWA+A IA K D+R L ++DGVN AL LW+ LL G L IL
Sbjct: 7 SGSRMLW-LVNVLAYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLIQAAWSIVFAQELLIVSAILLCLITLSLTLAVISLSLIQCEEGITLFTLPFWGVYFPIGLHGGWTLAAAIVNINVALELRGDTGSELAALILSLVGAALGAAFISLVFHNQPYLLAVAWAIAGIASKQDYRFVQLGKDLSDGVNVALQGLWIGLLCIGVLGIL 261
BLAST of mRNA_F-serratus_M_contig685.17916.1 vs. uniprot
Match: A0A835ZJ92_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ92_9STRA) HSP 1 Score: 172 bits (436), Expect = 9.780e-45 Identity = 107/253 (42.29%), Postives = 150/253 (59.29%), Query Frame = 1
Query: 172 NVIAFLVNFLVVALGRLGWMGKINREVSDSHPTLLTPSGWSMSIWPVIFGAEALLMFWQS---RAAKGQVET-VSPWFAIACIFQALWSVTFARELLTASAVLLPLIAICLTVAVWQLSHLKAKGNASLLSLDYWALHFPIGLHAGWTTAASFVMVNMAL-EAQPLETRVAALFVAIIVAPLAALLVALVFDDQAYLCAVAWALAAI-ADKSDFRRSTLPSAVADGVNRALSVLWVTLLVFGALVILASKLWK 912
NV+AF +NF VV G GK N++VSDS PTL TP+ ++ SIW +IF +E L+ WQ+ A V+ + PWFA AC+ QA+WS+ FA+E LT SAV+L IA+CL A L+ +A+G A D+ LH PIGLHAGWT AA+ V +N+A + + +V A V + + +V D A+L AV WALAAI A+ +R + L VA G+ A++V+WV LL + + A +L K
Sbjct: 37 NVVAFALNFAVVGASNFGLWGKTNKDVSDSIPTLTTPAAYAFSIWGLIFTSETALVVWQALPRNAGNLAVKQGLGPWFAAACVLQAVWSIAFAQEALTLSAVILVGIAVCLGKASANLAGFRARGAAWF---DHLILHAPIGLHAGWTCAAALVNINLAAAQTSGVAAQVTAAIVTVFAXXXXXAVYGVVLLDPAFLAAVVWALAAIVANDGGYRDALLGKEVARGLTGAITVIWVGLLALQVVAVAARRLRK 286
BLAST of mRNA_F-serratus_M_contig685.17916.1 vs. uniprot
Match: A0A0G4FPA6_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FPA6_9ALVE) HSP 1 Score: 100 bits (248), Expect = 2.670e-19 Identity = 63/181 (34.81%), Postives = 94/181 (51.93%), Query Frame = 1
Query: 136 MVSAAKTDWGRINVIAFLVNFLVVALGRLGWMGKINREVSDSHPTLLTPSGWSMSIWPVIFGAEALLMFWQS----RAAKGQVETVSPWFAIACIFQALWSVTFARELLTASAVLLPLIAICLTVAVWQLSHL------KAKGNASLLSLDYWALHFPIGLHAGWTTAASFVMVNMALEAQ 648
MVSA W N++AF++N ++V L G G N E S + T++TP+G++ SIW +I+ E + +Q +K E VS W +FQ LW++ FAR+ + ASAVLL +I + L V L K+ + L+YW P G+H GW TAA+ + N+ AQ
Sbjct: 1 MVSA----WSISNLVAFILNAVLVNLSNTGIYGPTNAEQSAKYSTVITPAGYAFSIWGLIYITEGIWAIYQMFPPVSRSKLLSEGVSFWQISMSVFQVLWTIAFARDWIIASAVLLLMIWVSLVGLVVSLFRFRTGEVDKSGEKREISLLNYWIFCVPFGIHLGWVTAAAILNWNIVTVAQ 177
BLAST of mRNA_F-serratus_M_contig685.17916.1 vs. uniprot
Match: A0A6S9E5Q9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E5Q9_HETAK) HSP 1 Score: 84.7 bits (208), Expect = 4.330e-14 Identity = 53/156 (33.97%), Postives = 83/156 (53.21%), Query Frame = 1
Query: 172 NVIAFLVNFL----VVALGRLGWMGKINREVSDSHPTLLTPSGWSMSI-WPVIFGAEALLMFWQSRAAKGQVET---VSPWFAIACIFQALWSVTFARELLTASAVLLPLIAICLTVAVWQLSHLKAK----GNASLLSLDYWALHFPIGLHAGWT 603
N+ AFL+N L + +G G +G N E+S +PT+LTP ++ + W +IF EA + WQ ++ +S WF IAC+ QA W+ TFA+E + S +LL ++ L +A+W+L+ + K G ++ W P G HA WT
Sbjct: 9 NLAAFLLNLLCTFGISYMGEFG-VGHTNVEISAQYPTILTPPWFAFPVAWVLIFTFEAFFVLWQMCQSERNPYVRHGISWWFVIACLAQAAWNFTFAKEHMITSLILLVIVTKALHIAMWRLTVVSDKPGTPGTGCCGAMWLWV---PFGAHAAWT 160
BLAST of mRNA_F-serratus_M_contig685.17916.1 vs. uniprot
Match: A0A853BFW3_9PSEU (Uncharacterized protein n=2 Tax=Amycolatopsis endophytica TaxID=860233 RepID=A0A853BFW3_9PSEU) HSP 1 Score: 80.9 bits (198), Expect = 3.160e-13 Identity = 70/220 (31.82%), Postives = 103/220 (46.82%), Query Frame = 1
Query: 163 GRINVIAFLVNFLVVALGRLGWMGKINREVSDSHPTLLTPSGWSMSIWPVIFGAEALLMFWQSRAAKGQVET---VSPWFAIACIFQALWSVTFARELLTASAVLLPLIAICLTVAVWQLSHLKAKGNASLLSLDYWALHFPIGLHAGWTTAASFV---MVNMALEAQPLETRVAALFVAIIVAPLAALLVALVF--------DDQAYLCAVAWALAAIA 780
G + V A L F+ G G G+ +V++SHPTLL P+G + +IW +I+ + WQ+ A+ + W A++ + A W V F + + S V++ + CL A +L A+G A L LH P+GL+AGW TAA+ AL +P +T VA+++A A L A V Y AVAWAL IA
Sbjct: 10 GAVLVTAAL-QFVAGTAGGAGLTGEPVGDVANSHPTLLLPAGTAFTIWSLIYAVLLVTAVWQALPAQRHRDVHRRTGWWLAVSGVLNAAWIVVFTQHWIVVSEVVIVALLACLLTAFAKLG--PARGWADRL-----LLHIPLGLYAGWVTAATVAGAATTGAALGIRPPDT------VAVVLAGAATLATAAVTVWVVSRWRAVAGYALAVAWALTWIA 215
BLAST of mRNA_F-serratus_M_contig685.17916.1 vs. uniprot
Match: A0A7S4JUF1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JUF1_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 3.390e-13 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 1
Query: 169 INVIAFLVNFLVV-ALGRLGWMGK-INREVSDSHPTLLTPSGWSMSIWPVIFGAEALLMFWQSR--AAKGQ--VETVSPWFAIA-CIFQALWSVTFARELLTASAVLLPLIAICLTVAVWQLSHLKAKGNASLLSLDYWALHFPIGLHAGWTTAASFVMVNMAL 639
+N +AF NF V +G LG+ G N E+S+ + TL+TP+GW+ SIW VIF A+ L F Q A +G V W+ I CI Q W+V F+ E++ S + I + L + V +S + + S+ Y L FP +HAGW AAS V +++ L
Sbjct: 295 LNFLAFAGNFAVTYGIGVLGFNGAPTNAELSEKYQTLITPAGWTFSIWAVIFTAQLLWSFAQLLLPAFRGAPLVRNGIRWYYIGVCIAQIGWTVAFSAEIIWLSLTAMLFILMFLVLIV--VSQYNTQSHVSICG--YLLLKFPFSVHAGWIVAASLVNISVLL 454
BLAST of mRNA_F-serratus_M_contig685.17916.1 vs. uniprot
Match: A0A7S4MKS2_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MKS2_9EUKA) HSP 1 Score: 79.7 bits (195), Expect = 1.860e-12 Identity = 62/178 (34.83%), Postives = 95/178 (53.37%), Query Frame = 1
Query: 145 AAKTDWGRINVI--AFLVNFLVVALGRLGWMGKI--------NREVSDSHPTLLTPSGWSMSIWPVIFGAE----ALLMFWQSRAA-KGQVETVSPWFAIACIFQALWSVTFARELLTASAVLLPLIAICLTVAVWQLSHLKAKGNASLLSLDYWALHFPIGLHAGWTTAASFVMVNM 633
AA+T + ++ AF++ L+V G G + N E+S + +L+TP+ W+ +IW +I+ E A L F +S A +G T+ W A A +FQ W++ FA E L+ +AV+L IA L + L ++ G LDYW + P+ LHAGWTTAAS V +N+
Sbjct: 24 AARTMAAKALLVISAFVLQTLLVFAGNSRLFGLLQPGSGWYTNVEMSQRYASLVTPAKWAFAIWGIIYMWEMVAVAYLAFARSAAFWQGSAPTML-WVA-ANVFQGAWALCFATERLSLAAVMLAAIAASLVGLAFAL---RSAGG-----LDYWLVAAPVWLHAGWTTAASIVNLNL 191
BLAST of mRNA_F-serratus_M_contig685.17916.1 vs. uniprot
Match: A0A1E7ET45_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ET45_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.310e-12 Identity = 56/172 (32.56%), Postives = 90/172 (52.33%), Query Frame = 1
Query: 133 TMVSAAKTDWGRINVIAFLVN-FLVVALGRLGWMGKI-NREVSDSHPTLLTPSGWSMSIWPVIFGAEALLMFWQSRAAKGQVETV-SPWF--AIACIFQALWSVTFARELLTASAVLLPLIAICLTVAVWQLSHLKAKGNASLLSLDYWALHFPIGLHAGWTTAASFVMVNM 633
T S K +W +N++A++VN F+ +G G G+ N E+S + T++TP G+S SIW VIF +A+ + WQ ++ E V W+ I +FQA W+++F+ E++ + + + I I L +A L K LL W P + GW AA+ VM N+
Sbjct: 24 TNTSLNKFNW--LNLLAYIVNVFVTFGIGIFGLTGQPDNGELSAKYQTIVTPFGFSFSIWGVIFIWQAIWVVWQFLPSQRNSEGVLKAWYYYPIMTVFQAGWTISFSYEIMWVALLCMYGIVITLVMATRSLQSYKKTWKGYLL----W--QGPFSIQTGWIMAAAVVMTNV 187
BLAST of mRNA_F-serratus_M_contig685.17916.1 vs. uniprot
Match: A0A7C6E286_9BACT (Uncharacterized protein n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A7C6E286_9BACT) HSP 1 Score: 73.9 bits (180), Expect = 7.720e-11 Identity = 59/234 (25.21%), Postives = 111/234 (47.44%), Query Frame = 1
Query: 205 VALGRLGWMGKINR----EVSDSHPTLLTPSGWSMSIWPVIFGAEALLMFWQSRA-AKGQVETVSPWFAIACIFQALWSVTFARELLTASAVLLPLIAICLTVAVWQLSHLKAKGNASLLSLDYWALHFPIGLHAGWTTAASFVMVNMALE------AQPLETRVAALFVAIIVAPLAALLVALVFDDQAYLCAVAWALAAIADKSDFRRSTLPSAVADGVNRALSVLWVTLLV 873
+A L +G+IN ++S ++PTLLTP+G++ +IW +I+ F+Q R + + P + ++C W ++ + +L+ L+A+ L + S + + GNA DYW + P GL+ GW TAA+ + + L+ A ET +A +A A + + ++ D + ++AWAL IA + + + ++ A + ++ L L V
Sbjct: 24 IAFNYLAAIGRINNVTPDQISAAYPTLLTPAGYTFTIWSLIYLGLIAFSFYQLRPQTHSAIRAIRPLYVLSCALNVGWIYSWHHNQIFLCLILILLLAVTLFLIG---SFISSPGNAK----DYWFVKAPFGLYFGWVTAATLINFMVWLKSSGYSPAPQWETALALGLIA--AATILGIFFRILLRDYIFPVSIAWALTGIAIEQTGNTAIIAASAAGVIASLIAALSFVLAV 248
BLAST of mRNA_F-serratus_M_contig685.17916.1 vs. uniprot
Match: A0A7S1GRD8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GRD8_CYCTE) HSP 1 Score: 74.3 bits (181), Expect = 1.120e-10 Identity = 50/172 (29.07%), Postives = 84/172 (48.84%), Query Frame = 1
Query: 169 INVIAFLVNFLVV-ALGRLGWMGKI--NREVSDSHPTLLTPSGWSMSIWPVIFGAEALL----MFWQSRAAKGQVETVSPWFAIACIFQALWSVTFARELLTASAV--------LLPLIAICLTVAVWQLSHLKAKGNASLLSLDYWALHFPIGLHAGWTTAASFVMVNMAL 639
+NV+A++ N L+V +G G + + N+E+S+ + TL+TP GW+ SIW VIF ++ + +F + + V + C+ Q W+ F+ E++ S V LL ++ ++V N L DY L FP +H GW ASF+ V++ L
Sbjct: 4 LNVVAYVANALIVYGIGLAGLIEGLPTNQELSEKYQTLITPIGWTFSIWAVIFISQFVFALVQLFSPFSGSVWVINGVGYSYVGVCLAQVGWTFAFSYEVIWLSLVAMLAILFFLLRILYAQYKISVGSSGGSGVSNNTRTLFRDYALLRFPFAIHGGWILVASFLNVSVVL 175 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig685.17916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig685.17916.1 >prot_F-serratus_M_contig685.17916.1 ID=prot_F-serratus_M_contig685.17916.1|Name=mRNA_F-serratus_M_contig685.17916.1|organism=Fucus serratus male|type=polypeptide|length=285bp MVSAAKTDWGRINVIAFLVNFLVVALGRLGWMGKINREVSDSHPTLLTPSback to top mRNA from alignment at F-serratus_M_contig685:198713..204245+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig685.17916.1 ID=mRNA_F-serratus_M_contig685.17916.1|Name=mRNA_F-serratus_M_contig685.17916.1|organism=Fucus serratus male|type=mRNA|length=5533bp|location=Sequence derived from alignment at F-serratus_M_contig685:198713..204245+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig685:198713..204245+ >mRNA_F-serratus_M_contig685.17916.1 ID=mRNA_F-serratus_M_contig685.17916.1|Name=mRNA_F-serratus_M_contig685.17916.1|organism=Fucus serratus male|type=CDS|length=1710bp|location=Sequence derived from alignment at F-serratus_M_contig685:198713..204245+ (Fucus serratus male)back to top |